Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741650 | AET00369.2 | 85.634 | 891 | 80 | 4 | 1 | 890 | 1 | 844 | 0.0 | 1545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741650 | sp|Q680C0|GDL62_ARATH | 26.190 | 336 | 214 | 9 | 73 | 388 | 24 | 345 | 1.73e-26 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741650 | G7KD41 | 85.634 | 891 | 80 | 4 | 1 | 890 | 1 | 844 | 0.0 | 1545 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0741650 | 0.839315 | 1.705304e-57 | -8.615850e-47 |
| Msa0001940 | Msa0741650 | 0.819793 | 9.635097e-53 | -8.615850e-47 |
| Msa0002580 | Msa0741650 | 0.825586 | 4.323861e-54 | -8.615850e-47 |
| Msa0005890 | Msa0741650 | 0.815810 | 7.639895e-52 | -8.615850e-47 |
| Msa0017930 | Msa0741650 | 0.811543 | 6.641802e-51 | -8.615850e-47 |
| Msa0017950 | Msa0741650 | 0.823912 | 1.072996e-53 | -8.615850e-47 |
| Msa0027280 | Msa0741650 | 0.823560 | 1.297296e-53 | -8.615850e-47 |
| Msa0034810 | Msa0741650 | 0.815123 | 1.086194e-51 | -8.615850e-47 |
| Msa0081020 | Msa0741650 | 0.827329 | 1.661836e-54 | -8.615850e-47 |
| Msa0081390 | Msa0741650 | 0.830066 | 3.620441e-55 | -8.615850e-47 |
| Msa0081450 | Msa0741650 | 0.825579 | 4.340159e-54 | -8.615850e-47 |
| Msa0081780 | Msa0741650 | 0.808425 | 3.117591e-50 | -8.615850e-47 |
| Msa0090400 | Msa0741650 | 0.801771 | 7.695481e-49 | -8.615850e-47 |
| Msa0098040 | Msa0741650 | 0.802964 | 4.369092e-49 | -8.615850e-47 |
| Msa0101500 | Msa0741650 | -0.830895 | 2.270032e-55 | -8.615850e-47 |
| Msa0611210 | Msa0741650 | 0.830069 | 3.613927e-55 | -8.615850e-47 |
| Msa0651550 | Msa0741650 | 0.811706 | 6.120931e-51 | -8.615850e-47 |
| Msa0741220 | Msa0741650 | 0.857975 | 1.131450e-62 | -8.615850e-47 |
| Msa0741650 | Msa0756490 | 0.814069 | 1.858967e-51 | -8.615850e-47 |
| Msa0741650 | Msa0792370 | 0.806004 | 1.015234e-49 | -8.615850e-47 |
| Msa0741650 | Msa0795870 | 0.825956 | 3.532978e-54 | -8.615850e-47 |
| Msa0741650 | Msa0822730 | 0.861398 | 1.055072e-63 | -8.615850e-47 |
| Msa0741650 | Msa0824450 | 0.810875 | 9.271907e-51 | -8.615850e-47 |
| Msa0741650 | Msa0829300 | 0.827957 | 1.174350e-54 | -8.615850e-47 |
| Msa0741650 | Msa0829330 | 0.819844 | 9.379649e-53 | -8.615850e-47 |
| Msa0741650 | Msa0833650 | 0.828606 | 8.189416e-55 | -8.615850e-47 |
| Msa0741650 | Msa0835490 | 0.848840 | 4.742687e-60 | -8.615850e-47 |
| Msa0741650 | Msa0861850 | 0.802162 | 6.394439e-49 | -8.615850e-47 |
| Msa0741650 | Msa0869280 | 0.802619 | 5.149093e-49 | -8.615850e-47 |
| Msa0741650 | Msa0905240 | 0.802248 | 6.138252e-49 | -8.615850e-47 |
| Msa0741650 | Msa0928300 | 0.807672 | 4.507702e-50 | -8.615850e-47 |
| Msa0741650 | Msa0937230 | 0.800773 | 1.231282e-48 | -8.615850e-47 |
| Msa0741650 | Msa0960880 | -0.817410 | 3.345443e-52 | -8.615850e-47 |
| Msa0741650 | Msa0967870 | 0.825089 | 5.668154e-54 | -8.615850e-47 |
| Msa0741650 | Msa1044680 | 0.818482 | 1.915785e-52 | -8.615850e-47 |
| Msa0741650 | Msa1071180 | -0.804905 | 1.725757e-49 | -8.615850e-47 |
| Msa0741650 | Msa1090140 | 0.802618 | 5.149804e-49 | -8.615850e-47 |
| Msa0741650 | Msa1103990 | 0.822743 | 2.011521e-53 | -8.615850e-47 |
| Msa0741650 | Msa1105640 | 0.809912 | 1.496225e-50 | -8.615850e-47 |
| Msa0741650 | Msa1132840 | 0.833676 | 4.650342e-56 | -8.615850e-47 |
| Msa0741650 | Msa1155170 | -0.819693 | 1.015599e-52 | -8.615850e-47 |
| Msa0741650 | Msa1205280 | 0.806417 | 8.308149e-50 | -8.615850e-47 |
| Msa0741650 | Msa1208950 | 0.801673 | 8.059908e-49 | -8.615850e-47 |
| Msa0741650 | Msa1265650 | 0.829859 | 4.066361e-55 | -8.615850e-47 |
| Msa0741650 | Msa1303560 | 0.805504 | 1.293143e-49 | -8.615850e-47 |
| Msa0741650 | Msa1303650 | 0.805170 | 1.518732e-49 | -8.615850e-47 |
| Msa0741650 | Msa1325410 | -0.836214 | 1.066857e-56 | -8.615850e-47 |
| Msa0741650 | Msa1340200 | 0.805562 | 1.257482e-49 | -8.615850e-47 |
| Msa0741650 | Msa1347310 | 0.838934 | 2.141279e-57 | -8.615850e-47 |
| Msa0741650 | Msa1356600 | -0.807427 | 5.081938e-50 | -8.615850e-47 |
| Msa0741650 | Msa1372040 | 0.831644 | 1.485582e-55 | -8.615850e-47 |
| Msa0741650 | Msa1372230 | 0.807610 | 4.647122e-50 | -8.615850e-47 |
| Msa0741650 | Msa1405460 | 0.820650 | 6.133188e-53 | -8.615850e-47 |
| Msa0741650 | Msa1414640 | 0.999681 | 0.000000e+00 | -8.615850e-47 |
| Msa0741650 | Msa1450100 | 0.814537 | 1.465039e-51 | -8.615850e-47 |
| Msa0132630 | Msa0741650 | -0.818447 | 1.951062e-52 | -8.615850e-47 |
| Msa0173690 | Msa0741650 | 0.817752 | 2.801584e-52 | -8.615850e-47 |
| Msa0175730 | Msa0741650 | 0.806289 | 8.841784e-50 | -8.615850e-47 |
| Msa0175750 | Msa0741650 | 0.829423 | 5.191606e-55 | -8.615850e-47 |
| Msa0178560 | Msa0741650 | 0.802105 | 6.570006e-49 | -8.615850e-47 |
| Msa0188610 | Msa0741650 | 0.816857 | 4.454121e-52 | -8.615850e-47 |
| Msa0191020 | Msa0741650 | 0.800855 | 1.184921e-48 | -8.615850e-47 |
| Msa0211030 | Msa0741650 | 0.822370 | 2.456822e-53 | -8.615850e-47 |
| Msa0225100 | Msa0741650 | 0.820869 | 5.462014e-53 | -8.615850e-47 |
| Msa0233320 | Msa0741650 | 0.803882 | 2.819966e-49 | -8.615850e-47 |
| Msa0405680 | Msa0741650 | 0.846359 | 2.281844e-59 | -8.615850e-47 |
| Msa0436910 | Msa0741650 | 0.820579 | 6.366192e-53 | -8.615850e-47 |
| Msa0476650 | Msa0741650 | 0.804018 | 2.641799e-49 | -8.615850e-47 |
| Msa0244640 | Msa0741650 | 0.833387 | 5.490376e-56 | -8.615850e-47 |
| Msa0266180 | Msa0741650 | 0.816045 | 6.769432e-52 | -8.615850e-47 |
| Msa0270340 | Msa0741650 | 0.850389 | 1.752935e-60 | -8.615850e-47 |
| Msa0279690 | Msa0741650 | 0.800800 | 1.215848e-48 | -8.615850e-47 |
| Msa0283330 | Msa0741650 | 0.828797 | 7.363341e-55 | -8.615850e-47 |
| Msa0287740 | Msa0741650 | 0.825412 | 4.754589e-54 | -8.615850e-47 |
| Msa0290720 | Msa0741650 | 0.820371 | 7.106134e-53 | -8.615850e-47 |
| Msa0298470 | Msa0741650 | 0.815925 | 7.201795e-52 | -8.615850e-47 |
| Msa0307670 | Msa0741650 | 0.804700 | 1.905112e-49 | -8.615850e-47 |
| Msa0321620 | Msa0741650 | 0.821338 | 4.258985e-53 | -8.615850e-47 |
| Msa0349210 | Msa0741650 | 0.823915 | 1.070884e-53 | -8.615850e-47 |
| Msa0519830 | Msa0741650 | 0.805278 | 1.441901e-49 | -8.615850e-47 |
| Msa0528570 | Msa0741650 | 0.802257 | 6.113534e-49 | -8.615850e-47 |
| Msa0529030 | Msa0741650 | 0.822920 | 1.829409e-53 | -8.615850e-47 |
| Msa0530780 | Msa0741650 | 0.829141 | 6.075749e-55 | -8.615850e-47 |
| Msa0557460 | Msa0741650 | 0.814107 | 1.823308e-51 | -8.615850e-47 |
| Msa0580370 | Msa0741650 | 0.831055 | 2.073711e-55 | -8.615850e-47 |
| Msa0581470 | Msa0741650 | 0.809725 | 1.641510e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741650 | MtrunA17_Chr5g0443021 | 84.916 | 537 | 45 | 1 | 1 | 537 | 1 | 501 | 0.0 | 937 |
| Msa0741650 | MtrunA17_Chr5g0443021 | 39.333 | 300 | 157 | 8 | 415 | 692 | 205 | 501 | 8.50e-46 | 172 |
| Msa0741650 | MtrunA17_Chr5g0443021 | 39.516 | 248 | 121 | 11 | 579 | 803 | 211 | 452 | 1.77e-36 | 144 |
| Msa0741650 | MtrunA17_Chr5g0443031 | 89.320 | 309 | 31 | 2 | 583 | 890 | 1 | 308 | 0.0 | 555 |
| Msa0741650 | MtrunA17_Chr5g0443031 | 50.226 | 221 | 101 | 5 | 431 | 645 | 6 | 223 | 4.13e-56 | 196 |
| Msa0741650 | MtrunA17_Chr5g0443031 | 36.777 | 242 | 122 | 8 | 256 | 488 | 3 | 222 | 3.87e-34 | 133 |
| Msa0741650 | MtrunA17_Chr5g0443011 | 81.495 | 281 | 47 | 1 | 116 | 396 | 14 | 289 | 1.71e-166 | 486 |
| Msa0741650 | MtrunA17_Chr5g0443011 | 42.857 | 147 | 66 | 5 | 579 | 709 | 145 | 289 | 2.88e-24 | 103 |
| Msa0741650 | MtrunA17_Chr5g0443011 | 38.710 | 155 | 80 | 4 | 415 | 556 | 139 | 291 | 2.18e-18 | 86.7 |
| Msa0741650 | MtrunA17_Chr5g0442991 | 55.476 | 420 | 135 | 8 | 1 | 413 | 1 | 375 | 5.73e-142 | 426 |
| Msa0741650 | MtrunA17_Chr5g0442991 | 48.503 | 167 | 62 | 6 | 575 | 722 | 210 | 371 | 3.98e-32 | 129 |
| Msa0741650 | MtrunA17_Chr5g0442991 | 41.667 | 168 | 79 | 5 | 415 | 567 | 208 | 371 | 1.04e-25 | 110 |
| Msa0741650 | MtrunA17_Chr3g0096121 | 53.980 | 402 | 133 | 7 | 16 | 410 | 44 | 400 | 4.52e-127 | 389 |
| Msa0741650 | MtrunA17_Chr3g0096121 | 44.785 | 163 | 66 | 6 | 579 | 720 | 238 | 397 | 1.55e-25 | 110 |
| Msa0741650 | MtrunA17_Chr3g0096121 | 34.524 | 168 | 89 | 4 | 415 | 564 | 232 | 396 | 4.30e-17 | 84.7 |
| Msa0741650 | MtrunA17_Chr8g0388281 | 30.882 | 340 | 189 | 7 | 73 | 388 | 22 | 339 | 1.01e-37 | 144 |
| Msa0741650 | MtrunA17_Chr5g0410331 | 30.294 | 340 | 186 | 8 | 73 | 386 | 23 | 337 | 2.02e-32 | 129 |
| Msa0741650 | MtrunA17_Chr5g0396551 | 28.070 | 342 | 196 | 9 | 73 | 388 | 22 | 339 | 1.55e-30 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741650 | AT5G50890.1 | 49.242 | 396 | 154 | 8 | 16 | 404 | 49 | 404 | 7.71e-117 | 362 |
| Msa0741650 | AT5G50890.1 | 37.059 | 170 | 80 | 9 | 575 | 719 | 239 | 406 | 7.87e-15 | 78.2 |
| Msa0741650 | AT5G50890.1 | 32.353 | 170 | 95 | 6 | 415 | 564 | 237 | 406 | 5.42e-13 | 72.4 |
| Msa0741650 | AT5G24230.1 | 28.358 | 335 | 192 | 6 | 75 | 379 | 38 | 354 | 2.50e-30 | 124 |
| Msa0741650 | AT5G24230.3 | 28.358 | 335 | 192 | 6 | 75 | 379 | 38 | 354 | 2.50e-30 | 124 |
| Msa0741650 | AT5G24230.2 | 28.358 | 335 | 192 | 6 | 75 | 379 | 38 | 354 | 2.50e-30 | 124 |
| Msa0741650 | AT2G05260.1 | 27.457 | 346 | 196 | 8 | 75 | 385 | 25 | 350 | 7.97e-29 | 119 |
| Msa0741650 | AT2G05260.2 | 37.079 | 178 | 98 | 3 | 75 | 248 | 25 | 192 | 1.73e-28 | 117 |
| Msa0741650 | AT5G24220.1 | 26.866 | 335 | 193 | 8 | 75 | 382 | 41 | 350 | 7.78e-28 | 117 |
| Msa0741650 | AT4G10955.2 | 26.190 | 336 | 214 | 9 | 73 | 388 | 24 | 345 | 1.76e-27 | 115 |
| Msa0741650 | AT4G10955.1 | 26.190 | 336 | 214 | 9 | 73 | 388 | 24 | 345 | 1.76e-27 | 115 |
| Msa0741650 | AT5G24180.1 | 26.901 | 342 | 191 | 12 | 75 | 385 | 39 | 352 | 6.88e-25 | 108 |
| Msa0741650 | AT5G24200.2 | 29.738 | 343 | 168 | 10 | 76 | 380 | 25 | 332 | 4.76e-23 | 102 |
| Msa0741650 | AT5G24200.3 | 29.738 | 343 | 168 | 10 | 76 | 380 | 25 | 332 | 4.76e-23 | 102 |
| Msa0741650 | AT5G24200.1 | 29.738 | 343 | 168 | 10 | 76 | 380 | 25 | 332 | 4.76e-23 | 102 |
| Msa0741650 | AT5G24210.2 | 28.274 | 336 | 183 | 11 | 76 | 380 | 30 | 338 | 8.13e-22 | 98.6 |
| Msa0741650 | AT5G24210.3 | 28.274 | 336 | 183 | 11 | 76 | 380 | 30 | 338 | 8.13e-22 | 98.6 |
| Msa0741650 | AT5G24210.1 | 28.274 | 336 | 183 | 11 | 76 | 380 | 30 | 338 | 8.13e-22 | 98.6 |
Find 204 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAATAATGTTTCTTTATT+TGG | 0.078578 | 5_1:-61362099 | None:intergenic |
| GGCTTGAAGGATGCTGCTTT+TGG | 0.189077 | 5_1:+61365577 | Msa0741650:CDS |
| CATGAGCTTCGAGAAATTTC+TGG | 0.197329 | 5_1:-61364118 | None:intergenic |
| AACATTATTACATAGGAAAT+TGG | 0.224883 | 5_1:+61362110 | Msa0741650:five_prime_UTR |
| GGAGCACCAATTGGTTTAAA+TGG | 0.231548 | 5_1:-61363459 | None:intergenic |
| AGTTGAAAACTTTACCAAAT+TGG | 0.233288 | 5_1:+61362448 | Msa0741650:CDS |
| ACATGATCACAACTCTTAAT+TGG | 0.236822 | 5_1:+61362211 | Msa0741650:CDS |
| TTGATACTTCTTAAAGCTAT+TGG | 0.245387 | 5_1:-61365835 | None:intergenic |
| AGTTGGATACCTTCATTATC+TGG | 0.269699 | 5_1:+61365556 | Msa0741650:CDS |
| GCTATGAGCCTTGGAAATAT+TGG | 0.270906 | 5_1:+61363768 | Msa0741650:CDS |
| CAGAAAAGGAAGAATTTATA+TGG | 0.274727 | 5_1:+61364777 | Msa0741650:CDS |
| AAGAAATCTCTGCTGTTCTT+TGG | 0.275359 | 5_1:-61365053 | None:intergenic |
| GCTTGAAGGATACCGGTTAT+TGG | 0.275423 | 5_1:+61364444 | Msa0741650:CDS |
| TGCATTGGAGGGCATTCTTT+AGG | 0.288580 | 5_1:+61363654 | Msa0741650:CDS |
| CCGGTTATTGGGTGTGGAAA+TGG | 0.295956 | 5_1:+61364456 | Msa0741650:CDS |
| GATGGTTAGAAAGGAGAATA+TGG | 0.298618 | 5_1:+61364523 | Msa0741650:CDS |
| CATTGTTAAGATTGAAAACT+TGG | 0.301924 | 5_1:-61365747 | None:intergenic |
| CATCGCCAATGTGGAGAATA+TGG | 0.306203 | 5_1:+61364043 | Msa0741650:CDS |
| GCCTCGTTTATCGCGCTTGA+TGG | 0.306679 | 5_1:+61363920 | Msa0741650:CDS |
| TGCCTTCACTGTCAGGCCTC+AGG | 0.308352 | 5_1:+61365374 | Msa0741650:CDS |
| GAGAAGTGACATATTATGTT+TGG | 0.311865 | 5_1:+61364312 | Msa0741650:CDS |
| CTTCCTTGCAGCTCATGGTT+TGG | 0.319831 | 5_1:+61364604 | Msa0741650:CDS |
| CATTCTTTAGGTGCTGGATT+TGG | 0.329693 | 5_1:+61363666 | Msa0741650:CDS |
| CTTGAAGGATACCGGTTATT+GGG | 0.330056 | 5_1:+61364445 | Msa0741650:CDS |
| ACAAAGCAAGCAAACCAATT+TGG | 0.333946 | 5_1:-61362462 | None:intergenic |
| GCTTCATTGTGCTCATTAGA+AGG | 0.334639 | 5_1:-61364068 | None:intergenic |
| CAATTGGACCACGGCATAAC+CGG | 0.343829 | 5_1:-61365401 | None:intergenic |
| TGCTGAAGTTCTAAATCATT+TGG | 0.347676 | 5_1:-61364638 | None:intergenic |
| GGTTTGATACCTCAGTTATC+TGG | 0.350558 | 5_1:+61364890 | Msa0741650:CDS |
| TTCAAACCATTTAAACCAAT+TGG | 0.351269 | 5_1:+61363453 | Msa0741650:CDS |
| AGCTGGGTGCCTTCACTGTC+AGG | 0.364707 | 5_1:+61365367 | Msa0741650:CDS |
| TATCCTTCAAGCTAGATAAC+TGG | 0.365811 | 5_1:-61364433 | None:intergenic |
| TCAAAATCTCTTCGCATTGT+AGG | 0.366852 | 5_1:-61363522 | None:intergenic |
| CGCTTGATGGATGCTTGTTT+AGG | 0.369232 | 5_1:+61363933 | Msa0741650:CDS |
| ATGAGTTTGCTATCATGAAT+AGG | 0.374508 | 5_1:-61365127 | None:intergenic |
| GTGGCTAATGAAACATAATA+TGG | 0.377198 | 5_1:-61364272 | None:intergenic |
| TTTATGTTAACAAGAATGAT+TGG | 0.381468 | 5_1:+61363979 | Msa0741650:CDS |
| TGTTGCTTGGGAATGCTTGA+AGG | 0.386263 | 5_1:+61363560 | Msa0741650:CDS |
| TATTCAAGTGGGAAAGGAAT+TGG | 0.390968 | 5_1:+61363689 | Msa0741650:CDS |
| GACTTCAGGTATAAGTTTGA+TGG | 0.395063 | 5_1:+61364400 | Msa0741650:CDS |
| CAAATTTGTTTACTGTCTCC+AGG | 0.397324 | 5_1:+61364570 | Msa0741650:CDS |
| CAGGTATAAGTTTGATGGGT+TGG | 0.400012 | 5_1:+61364405 | Msa0741650:CDS |
| TGTACTTTCTTGAACTTGAT+AGG | 0.401899 | 5_1:+61363283 | Msa0741650:CDS |
| GATGATTTACTTTCAACTAA+AGG | 0.402020 | 5_1:-61362177 | None:intergenic |
| TGCCATGTGTCTTGCAGAAA+AGG | 0.402782 | 5_1:+61364763 | Msa0741650:CDS |
| TGTTACGTCCCAAGGTGTAT+TGG | 0.407057 | 5_1:-61365176 | None:intergenic |
| GCTTGAAGAATGTAGCTTAT+CGG | 0.408674 | 5_1:+61364912 | Msa0741650:CDS |
| CGGTTATTGGGTGTGGAAAT+GGG | 0.414784 | 5_1:+61364457 | Msa0741650:CDS |
| TAAATAGAAGTGAGGTGAAA+TGG | 0.417307 | 5_1:+61365875 | Msa0741650:three_prime_UTR |
| CTTTCTTGAACTTGATAGGC+AGG | 0.417473 | 5_1:+61363287 | Msa0741650:CDS |
| GAACACTGGTACACCTTCTC+AGG | 0.421632 | 5_1:+61364232 | Msa0741650:CDS |
| CAAATGGGAAGTGAAATAAA+AGG | 0.421987 | 5_1:-61365211 | None:intergenic |
| CGGTTATGCCGTGGTCCAAT+TGG | 0.422848 | 5_1:+61365402 | Msa0741650:CDS |
| GGAGGGCATTCTTTAGGTGC+TGG | 0.423182 | 5_1:+61363660 | Msa0741650:CDS |
| TTGTGTGGGCTTATACTTGA+AGG | 0.432168 | 5_1:-61363355 | None:intergenic |
| GTTTCACTTGCTATGAGCCT+TGG | 0.434142 | 5_1:+61363759 | Msa0741650:CDS |
| CTCTTGTCAGCATACAGATA+TGG | 0.434564 | 5_1:-61365616 | None:intergenic |
| CCGTGGTCCAATTGGTTCCT+AGG | 0.434775 | 5_1:+61365410 | Msa0741650:CDS |
| TACTTCCGGTGTTGGTTTGA+AGG | 0.434795 | 5_1:+61364868 | Msa0741650:CDS |
| GTTTAAGTTCTTAAAACTCT+AGG | 0.441325 | 5_1:+61365802 | Msa0741650:three_prime_UTR |
| AATTGGTTCCTAGGCAACTT+AGG | 0.442386 | 5_1:+61365419 | Msa0741650:CDS |
| CCATTTCCACACCCAATAAC+CGG | 0.442745 | 5_1:-61364456 | None:intergenic |
| TCTGATACTATCGAGACAAA+TGG | 0.443227 | 5_1:-61365227 | None:intergenic |
| TTTCGGTGCAATATTTGAAT+GGG | 0.446693 | 5_1:+61363407 | Msa0741650:CDS |
| TCTGAGTGCTAAAACAGCTC+TGG | 0.447876 | 5_1:-61363481 | None:intergenic |
| AGCTTATCGGGTGTGCGAAT+GGG | 0.447934 | 5_1:+61364925 | Msa0741650:CDS |
| TCCTTCAAGCAGTGAATCTC+GGG | 0.448588 | 5_1:+61364826 | Msa0741650:CDS |
| CTGCTCACGGCTTGCAACAA+TGG | 0.449740 | 5_1:+61365077 | Msa0741650:CDS |
| CTTTGTGATAACATACAACT+TGG | 0.450055 | 5_1:-61364090 | None:intergenic |
| ACCTTCATTATCTGGCTTGA+AGG | 0.450507 | 5_1:+61365564 | Msa0741650:CDS |
| ACCCGAGATTCACTGCTTGA+AGG | 0.451306 | 5_1:-61364827 | None:intergenic |
| CAAAATCTCTTCGCATTGTA+GGG | 0.452318 | 5_1:-61363521 | None:intergenic |
| GTTGCTCCAGCCACGAGCCT+TGG | 0.458204 | 5_1:+61365454 | Msa0741650:CDS |
| CTGAACTTCCTTGCAGCTCA+TGG | 0.458712 | 5_1:+61364599 | Msa0741650:CDS |
| CTTGAAGAATGTAGCTTATC+GGG | 0.459208 | 5_1:+61364913 | Msa0741650:CDS |
| CAGAAATTTCTCGAAGCTCA+TGG | 0.459672 | 5_1:+61364119 | Msa0741650:CDS |
| TAGCTTATCGGGTGTGCGAA+TGG | 0.460950 | 5_1:+61364924 | Msa0741650:CDS |
| TTCCTTCAAGCAGTGAATCT+CGG | 0.460978 | 5_1:+61364825 | Msa0741650:CDS |
| CAAGTGTACCATTGAAGAGC+TGG | 0.466299 | 5_1:+61365350 | Msa0741650:CDS |
| CTTGTTCTTCAGTATTTCCA+AGG | 0.467987 | 5_1:-61365471 | None:intergenic |
| GTATTTCCAAGGCTCGTGGC+TGG | 0.470007 | 5_1:-61365460 | None:intergenic |
| CAGAGATTTCTTTCTGCTCA+CGG | 0.476534 | 5_1:+61365064 | Msa0741650:CDS |
| TCTCTCTTGTTCCATCGGTA+TGG | 0.476992 | 5_1:-61364019 | None:intergenic |
| TGCTGAAGTTCTGCATCACT+TGG | 0.477143 | 5_1:-61365103 | None:intergenic |
| TTTATACACCAATACACCTT+GGG | 0.480101 | 5_1:+61365168 | Msa0741650:CDS |
| TAAGTTGCCTAGGAACCAAT+TGG | 0.481654 | 5_1:-61365417 | None:intergenic |
| ACTTGAGGTTCACTACTTGA+AGG | 0.482250 | 5_1:-61363834 | None:intergenic |
| AGGATACCGGTTATTGGGTG+TGG | 0.485209 | 5_1:+61364450 | Msa0741650:CDS |
| CTGTCAGGCCTCAGGGATAC+CGG | 0.485436 | 5_1:+61365382 | Msa0741650:CDS |
| ACAGCTCTGGGAGCACCAAT+TGG | 0.487086 | 5_1:-61363468 | None:intergenic |
| TTCATCAATCAATATTTGTG+TGG | 0.487447 | 5_1:-61363370 | None:intergenic |
| GCCTTCACTGTCAGGCCTCA+GGG | 0.487725 | 5_1:+61365375 | Msa0741650:CDS |
| TCTATACACCGGTTCACCTT+GGG | 0.488752 | 5_1:+61364703 | Msa0741650:CDS |
| TGTGAGATTTAAAGTAGCTA+TGG | 0.489698 | 5_1:+61363587 | Msa0741650:CDS |
| AAACTCATAAGCAGGCGAAC+TGG | 0.491628 | 5_1:+61365142 | Msa0741650:CDS |
| GGGACTTCATTGATTCTAGC+TGG | 0.493150 | 5_1:+61362235 | Msa0741650:CDS |
| GGTTACAATACTTCCGGTGT+TGG | 0.494372 | 5_1:+61364860 | Msa0741650:CDS |
| AGCCATTGCAAGTCTTATAC+AGG | 0.495279 | 5_1:+61363257 | Msa0741650:CDS |
| GATGTTCTCTCTTGTTCCAT+CGG | 0.496658 | 5_1:-61364024 | None:intergenic |
| TTATCTAGCTTGAAGGATAC+CGG | 0.497729 | 5_1:+61364437 | Msa0741650:CDS |
| ACCCCAGTTATCTAGCTTGA+AGG | 0.497805 | 5_1:+61364430 | Msa0741650:CDS |
| CTCTATACACCGGTTCACCT+TGG | 0.500163 | 5_1:+61364702 | Msa0741650:CDS |
| ACTTCCGGTGTTGGTTTGAA+GGG | 0.501655 | 5_1:+61364869 | Msa0741650:CDS |
| CTGATACTATCGAGACAAAT+GGG | 0.503813 | 5_1:-61365226 | None:intergenic |
| TCATCAATCAATATTTGTGT+GGG | 0.503887 | 5_1:-61363369 | None:intergenic |
| GATAAATACCTAAGTTGCCT+AGG | 0.506284 | 5_1:-61365427 | None:intergenic |
| ACAAGACTTCATTCCAGAGT+TGG | 0.509009 | 5_1:+61365539 | Msa0741650:CDS |
| AGCAGAAATGTATGCATTGG+AGG | 0.512323 | 5_1:+61363642 | Msa0741650:CDS |
| ACTTCAGGTATAAGTTTGAT+GGG | 0.514160 | 5_1:+61364401 | Msa0741650:CDS |
| GAAGGCACCCAGCTCTTCAA+TGG | 0.515579 | 5_1:-61365358 | None:intergenic |
| AGGGTCCTTTGCAATAACAT+AGG | 0.518536 | 5_1:+61365677 | Msa0741650:exon |
| AATGATGGTTACAATACTTC+CGG | 0.524409 | 5_1:+61364854 | Msa0741650:CDS |
| TTCACTGCTTGAAGGAAGCA+TGG | 0.524986 | 5_1:-61364819 | None:intergenic |
| CTTTATACACCAATACACCT+TGG | 0.524989 | 5_1:+61365167 | Msa0741650:CDS |
| TTAAATCCATTGTTAACTTG+AGG | 0.526347 | 5_1:-61365705 | None:intergenic |
| TGTGTGCCTCATCATATAAG+TGG | 0.526824 | 5_1:+61364347 | Msa0741650:CDS |
| GGAAGCAGAAATGTATGCAT+TGG | 0.529257 | 5_1:+61363639 | Msa0741650:CDS |
| CAGCTCATGGTTTGGAACAA+TGG | 0.530134 | 5_1:+61364612 | Msa0741650:CDS |
| ATAATGAAGGTATCCAACTC+TGG | 0.532180 | 5_1:-61365552 | None:intergenic |
| CACAGAAGAGGAGGTTGACA+AGG | 0.533386 | 5_1:+61364979 | Msa0741650:CDS |
| TGCTCACAAATTTGCTATTG+CGG | 0.533627 | 5_1:-61364193 | None:intergenic |
| GTGCAATATTTGAATGGGAT+CGG | 0.533820 | 5_1:+61363412 | Msa0741650:CDS |
| ATCCTTCAAGCTAGATAACT+GGG | 0.536251 | 5_1:-61364432 | None:intergenic |
| ATAAAGAAACATTATTACAT+AGG | 0.537365 | 5_1:+61362103 | Msa0741650:five_prime_UTR |
| GAATCTCGGGTGCTCAATGA+TGG | 0.537378 | 5_1:+61364839 | Msa0741650:CDS |
| AACGACGGACAAATGACTTC+AGG | 0.539145 | 5_1:+61364386 | Msa0741650:CDS |
| ATGATAGCAAACTCATAAGC+AGG | 0.543690 | 5_1:+61365134 | Msa0741650:CDS |
| AGCATTCCCAAGCAACAAAA+CGG | 0.544874 | 5_1:-61363554 | None:intergenic |
| CAACTTAAATCTTTGAACAC+TGG | 0.546107 | 5_1:+61364218 | Msa0741650:CDS |
| GTTTGCCATCGTTGTAACAA+AGG | 0.549344 | 5_1:-61362139 | None:intergenic |
| CTGAGTGCTAAAACAGCTCT+GGG | 0.549864 | 5_1:-61363480 | None:intergenic |
| ATTTGGTATTCAAGTGGGAA+AGG | 0.551039 | 5_1:+61363683 | Msa0741650:CDS |
| TGTCGTGAAGATGGTTAGAA+AGG | 0.551376 | 5_1:+61364514 | Msa0741650:CDS |
| TTCAGTATTTCCAAGGCTCG+TGG | 0.551596 | 5_1:-61365464 | None:intergenic |
| TGCTGGATTTGGTATTCAAG+TGG | 0.552441 | 5_1:+61363677 | Msa0741650:CDS |
| TCTTTCAAGTAGTGAAACTC+AGG | 0.553879 | 5_1:+61365297 | Msa0741650:CDS |
| AAGGAAGTTCAGTTGTTCCC+TGG | 0.555227 | 5_1:-61364588 | None:intergenic |
| AAGCTCATGGCTTGAAACAA+TGG | 0.556200 | 5_1:+61364132 | Msa0741650:CDS |
| TGTGTGGGCTTATACTTGAA+GGG | 0.556397 | 5_1:-61363354 | None:intergenic |
| GTGATGGAAAACTCATAAGA+AGG | 0.559123 | 5_1:+61364669 | Msa0741650:CDS |
| AAATCAGTGTATGATACGTA+TGG | 0.561870 | 5_1:+61363618 | Msa0741650:CDS |
| TAGAAAAGTACTACCTGAGA+AGG | 0.565700 | 5_1:-61364245 | None:intergenic |
| AAATTTGTTTACTGTCTCCA+GGG | 0.565902 | 5_1:+61364571 | Msa0741650:CDS |
| TGATCACAACTCTTAATTGG+AGG | 0.567969 | 5_1:+61362214 | Msa0741650:CDS |
| TCTAATATTTATGTGACGAG+TGG | 0.571796 | 5_1:-61364291 | None:intergenic |
| CTCACGGCTTGCAACAATGG+TGG | 0.572765 | 5_1:+61365080 | Msa0741650:CDS |
| GGCAAAGGAAATGATTAATG+TGG | 0.573590 | 5_1:+61363710 | Msa0741650:CDS |
| CAAGAATTGTGGCACAGAAG+AGG | 0.573673 | 5_1:+61364967 | Msa0741650:CDS |
| GGGTCCTTTGCAATAACATA+GGG | 0.575469 | 5_1:+61365678 | Msa0741650:exon |
| CTGTATGCTAATGAGAATGT+TGG | 0.580429 | 5_1:+61364488 | Msa0741650:CDS |
| TCCTTCAAGCCAGATAATGA+AGG | 0.583160 | 5_1:-61365565 | None:intergenic |
| TGTTGGCGCTGTCGTGAAGA+TGG | 0.583445 | 5_1:+61364505 | Msa0741650:CDS |
| GCTGGATTTGGTATTCAAGT+GGG | 0.587303 | 5_1:+61363678 | Msa0741650:CDS |
| GGAGGTTGACAAGGAGAATG+TGG | 0.588267 | 5_1:+61364988 | Msa0741650:CDS |
| GATTTACCACTTATATGATG+AGG | 0.590671 | 5_1:-61364353 | None:intergenic |
| TGGGTTCCTCATCTGTATGT+TGG | 0.593149 | 5_1:+61364944 | Msa0741650:CDS |
| GATCACAACTCTTAATTGGA+GGG | 0.594082 | 5_1:+61362215 | Msa0741650:CDS |
| CTTCAGCAAACTATCCGTGA+TGG | 0.594715 | 5_1:+61364653 | Msa0741650:CDS |
| GCTCGTGGCTGGAGCAACAA+AGG | 0.597100 | 5_1:-61365449 | None:intergenic |
| TATTGATTGATGAAAGAGAT+GGG | 0.597435 | 5_1:+61363379 | Msa0741650:CDS |
| AAGTGTACCATTGAAGAGCT+GGG | 0.601631 | 5_1:+61365351 | Msa0741650:CDS |
| GAGAATATGGATCATGAAGA+CGG | 0.602100 | 5_1:+61364536 | Msa0741650:CDS |
| TGTTCCCTATGTTATTGCAA+AGG | 0.602792 | 5_1:-61365682 | None:intergenic |
| CTGTATGTTGGCAAGAATTG+TGG | 0.603147 | 5_1:+61364956 | Msa0741650:CDS |
| GATTTACTTTCAACTAAAGG+AGG | 0.604115 | 5_1:-61362174 | None:intergenic |
| TTCTCATTAGCATACAGAAG+AGG | 0.607136 | 5_1:-61364482 | None:intergenic |
| ACCTCAAGTCAGCATTGATG+TGG | 0.612184 | 5_1:+61363848 | Msa0741650:CDS |
| AGGATCCATATTCTCCACAT+TGG | 0.613667 | 5_1:-61364048 | None:intergenic |
| CAGGGATACCGGTTATGCCG+TGG | 0.613998 | 5_1:+61365393 | Msa0741650:CDS |
| TGCCTGTATAAGACTTGCAA+TGG | 0.616517 | 5_1:-61363259 | None:intergenic |
| GATGGTTGACAAAGAGAACA+AGG | 0.618389 | 5_1:+61365657 | Msa0741650:CDS |
| TGGTGGAAAAGACGACAAGA+TGG | 0.619277 | 5_1:+61365639 | Msa0741650:CDS |
| GAATTGTGGCACAGAAGAGG+AGG | 0.621076 | 5_1:+61364970 | Msa0741650:CDS |
| TCCACATCAATGCTGACTTG+AGG | 0.623615 | 5_1:-61363849 | None:intergenic |
| CTCATGGTTTGGAACAATGG+TGG | 0.626885 | 5_1:+61364615 | Msa0741650:CDS |
| AGTGGGAAAGGAATTGGCAA+AGG | 0.630778 | 5_1:+61363695 | Msa0741650:CDS |
| GCAGAAATGTATGCATTGGA+GGG | 0.630869 | 5_1:+61363643 | Msa0741650:CDS |
| GTTCCAAACCATGAGCTGCA+AGG | 0.631713 | 5_1:-61364607 | None:intergenic |
| AAACAATGGTGGTCAAGTGA+CGG | 0.632207 | 5_1:+61364146 | Msa0741650:CDS |
| CAAATTAAATCTCTATACAC+CGG | 0.632498 | 5_1:+61364692 | Msa0741650:CDS |
| AGAAACCTTTGTTACAACGA+TGG | 0.639970 | 5_1:+61362134 | Msa0741650:exon |
| ATATTGATTGATGAAAGAGA+TGG | 0.641336 | 5_1:+61363378 | Msa0741650:CDS |
| TCCATCAAGCGCGATAAACG+AGG | 0.644282 | 5_1:-61363921 | None:intergenic |
| AAGAGAGAACATCGCCAATG+TGG | 0.644761 | 5_1:+61364034 | Msa0741650:CDS |
| GGAACACCTCAAGTTAACAA+TGG | 0.646064 | 5_1:+61365699 | Msa0741650:three_prime_UTR |
| TGATGTGGACGAGACTTATG+TGG | 0.646267 | 5_1:+61363863 | Msa0741650:CDS |
| CTCATAGCAAGTGAAACAGA+AGG | 0.653693 | 5_1:-61363753 | None:intergenic |
| TCCCTGAGGCCTGACAGTGA+AGG | 0.656091 | 5_1:-61365376 | None:intergenic |
| CTAAAGGAGGAACAACAACA+TGG | 0.656560 | 5_1:-61362161 | None:intergenic |
| TTCTTGTTAACATAAAGATG+AGG | 0.656648 | 5_1:-61363972 | None:intergenic |
| CTCATGGCTTGAAACAATGG+TGG | 0.660620 | 5_1:+61364135 | Msa0741650:CDS |
| TTCTTGCCAACATACAGATG+AGG | 0.662002 | 5_1:-61364950 | None:intergenic |
| CAAACCCTTCAAACCAACAC+CGG | 0.663576 | 5_1:-61364873 | None:intergenic |
| ATAGCAAGTGAAACAGAAGG+TGG | 0.668464 | 5_1:-61363750 | None:intergenic |
| CTGTATGCTGACAAGAGTGG+TGG | 0.669477 | 5_1:+61365622 | Msa0741650:CDS |
| TATTCGTCTAAATAGAAGTG+AGG | 0.671454 | 5_1:+61365867 | Msa0741650:three_prime_UTR |
| AAATCTCAAATCATCAACGA+CGG | 0.700893 | 5_1:+61364371 | Msa0741650:CDS |
| CCTAGGAACCAATTGGACCA+CGG | 0.706088 | 5_1:-61365410 | None:intergenic |
| TTCTTCAAGCCAGATAACTG+AGG | 0.718042 | 5_1:-61364899 | None:intergenic |
| CGGCATAACCGGTATCCCTG+AGG | 0.720056 | 5_1:-61365390 | None:intergenic |
| TCCTTCAAGCTAGATAACTG+GGG | 0.720408 | 5_1:-61364431 | None:intergenic |
| ATGGTTGACAAAGAGAACAA+GGG | 0.722106 | 5_1:+61365658 | Msa0741650:CDS |
| AGAGTTGTGATCATGTTACG+AGG | 0.726905 | 5_1:-61362204 | None:intergenic |
| TATCTGTATGCTGACAAGAG+TGG | 0.771941 | 5_1:+61365619 | Msa0741650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAGTTATTTTTATTTTTTTT+TGG | + | chr5_1:61362983-61363002 | Msa0741650:intron | 10.0% |
| !! | TGTAATAATGTTTCTTTATT+TGG | - | chr5_1:61362102-61362121 | None:intergenic | 15.0% |
| !! | ATAAAGAAACATTATTACAT+AGG | + | chr5_1:61362103-61362122 | Msa0741650:five_prime_UTR | 15.0% |
| !! | TATTAATCTATGAAATGAAA+TGG | - | chr5_1:61362268-61362287 | None:intergenic | 15.0% |
| !! | AACATTATTACATAGGAAAT+TGG | + | chr5_1:61362110-61362129 | Msa0741650:five_prime_UTR | 20.0% |
| !!! | ATTTCTTGTTGATGTTTTTT+AGG | + | chr5_1:61362390-61362409 | Msa0741650:intron | 20.0% |
| !!! | TTCATTTCTCAAATTTTTAC+TGG | + | chr5_1:61362825-61362844 | Msa0741650:intron | 20.0% |
| !! | TATAATGTCAGTTATATTCA+TGG | + | chr5_1:61363012-61363031 | Msa0741650:intron | 20.0% |
| !!! | ATTCATGGTTTTTTATTGTA+TGG | + | chr5_1:61363027-61363046 | Msa0741650:intron | 20.0% |
| !!! | TTTGAAACAAAACAATTATC+AGG | - | chr5_1:61363210-61363229 | None:intergenic | 20.0% |
| !!! | ATAATTGTTTTGTTTCAAAC+AGG | + | chr5_1:61363211-61363230 | Msa0741650:intron | 20.0% |
| !! | TTTATGTTAACAAGAATGAT+TGG | + | chr5_1:61363979-61363998 | Msa0741650:CDS | 20.0% |
| !!! | GACAAAAAGAAGAATTTTTA+TGG | + | chr5_1:61365248-61365267 | Msa0741650:CDS | 20.0% |
| !!! | AAGAAGAATTTTTATGGAAA+TGG | + | chr5_1:61365254-61365273 | Msa0741650:CDS | 20.0% |
| ! | GATGATTTACTTTCAACTAA+AGG | - | chr5_1:61362180-61362199 | None:intergenic | 25.0% |
| ! | AGTTGAAAACTTTACCAAAT+TGG | + | chr5_1:61362448-61362467 | Msa0741650:CDS | 25.0% |
| !!! | TAACAGACTTTTTCCATTTA+CGG | - | chr5_1:61362521-61362540 | None:intergenic | 25.0% |
| !!! | TATTTTTTCATCAGCAATTG+TGG | - | chr5_1:61362592-61362611 | None:intergenic | 25.0% |
| ! | AGTCCTTAGAATCTTTATAA+GGG | - | chr5_1:61362707-61362726 | None:intergenic | 25.0% |
| ! | AAGTCCTTAGAATCTTTATA+AGG | - | chr5_1:61362708-61362727 | None:intergenic | 25.0% |
| !!! | ATGCTTTTAATCTAAAGTGT+CGG | - | chr5_1:61362775-61362794 | None:intergenic | 25.0% |
| ! | TCATCAATCAATATTTGTGT+GGG | - | chr5_1:61363372-61363391 | None:intergenic | 25.0% |
| ! | TTCATCAATCAATATTTGTG+TGG | - | chr5_1:61363373-61363392 | None:intergenic | 25.0% |
| !! | ATATTGATTGATGAAAGAGA+TGG | + | chr5_1:61363378-61363397 | Msa0741650:CDS | 25.0% |
| !! | TATTGATTGATGAAAGAGAT+GGG | + | chr5_1:61363379-61363398 | Msa0741650:CDS | 25.0% |
| ! | TTCAAACCATTTAAACCAAT+TGG | + | chr5_1:61363453-61363472 | Msa0741650:CDS | 25.0% |
| ! | TTCTTGTTAACATAAAGATG+AGG | - | chr5_1:61363975-61363994 | None:intergenic | 25.0% |
| ! | CAAATTAAATCTCTATACAC+CGG | + | chr5_1:61364692-61364711 | Msa0741650:CDS | 25.0% |
| ! | GAAGTAAAAAAAGGATCAAA+TGG | + | chr5_1:61364725-61364744 | Msa0741650:CDS | 25.0% |
| ! | CAGAAAAGGAAGAATTTATA+TGG | + | chr5_1:61364777-61364796 | Msa0741650:CDS | 25.0% |
| !! | TTAAATCCATTGTTAACTTG+AGG | - | chr5_1:61365708-61365727 | None:intergenic | 25.0% |
| ! | CATTGTTAAGATTGAAAACT+TGG | - | chr5_1:61365750-61365769 | None:intergenic | 25.0% |
| !! | GTTTAAGTTCTTAAAACTCT+AGG | + | chr5_1:61365802-61365821 | Msa0741650:three_prime_UTR | 25.0% |
| ! | TTGATACTTCTTAAAGCTAT+TGG | - | chr5_1:61365838-61365857 | None:intergenic | 25.0% |
| GATTTACTTTCAACTAAAGG+AGG | - | chr5_1:61362177-61362196 | None:intergenic | 30.0% | |
| ACATGATCACAACTCTTAAT+TGG | + | chr5_1:61362211-61362230 | Msa0741650:CDS | 30.0% | |
| !!! | GTTGATGTTTTTTAGGATGT+TGG | + | chr5_1:61362397-61362416 | Msa0741650:intron | 30.0% |
| !!! | GTCTTGTTTTAGAACATTGT+TGG | + | chr5_1:61362550-61362569 | Msa0741650:intron | 30.0% |
| AACCCCTTATAAAGATTCTA+AGG | + | chr5_1:61362701-61362720 | Msa0741650:intron | 30.0% | |
| GTCCTTAGAATCTTTATAAG+GGG | - | chr5_1:61362706-61362725 | None:intergenic | 30.0% | |
| GTGATTGAATGTAATCAGAT+TGG | - | chr5_1:61362804-61362823 | None:intergenic | 30.0% | |
| ! | TCTCAAATTTTTACTGGTGA+CGG | + | chr5_1:61362831-61362850 | Msa0741650:intron | 30.0% |
| AACTCATTCTGTATTTGACT+TGG | + | chr5_1:61362905-61362924 | Msa0741650:intron | 30.0% | |
| !!! | TTGTTTTGTTTCAAACAGGA+AGG | + | chr5_1:61363215-61363234 | Msa0741650:intron | 30.0% |
| TGTACTTTCTTGAACTTGAT+AGG | + | chr5_1:61363283-61363302 | Msa0741650:CDS | 30.0% | |
| !! | TTTTCGGTGCAATATTTGAA+TGG | + | chr5_1:61363406-61363425 | Msa0741650:CDS | 30.0% |
| ! | TTTCGGTGCAATATTTGAAT+GGG | + | chr5_1:61363407-61363426 | Msa0741650:CDS | 30.0% |
| ! | TGTGAGATTTAAAGTAGCTA+TGG | + | chr5_1:61363587-61363606 | Msa0741650:CDS | 30.0% |
| AAATCAGTGTATGATACGTA+TGG | + | chr5_1:61363618-61363637 | Msa0741650:CDS | 30.0% | |
| !!! | CCTTTTTTCCAATATTTCCA+AGG | - | chr5_1:61363779-61363798 | None:intergenic | 30.0% |
| CCTTGGAAATATTGGAAAAA+AGG | + | chr5_1:61363776-61363795 | Msa0741650:CDS | 30.0% | |
| GAAAAAAGGCTGAATATGTT+TGG | + | chr5_1:61363790-61363809 | Msa0741650:CDS | 30.0% | |
| TTGTTTAGGAAGCGAAAAAT+GGG | + | chr5_1:61363947-61363966 | Msa0741650:CDS | 30.0% | |
| ! | TACTTTTATATCCATACCGA+TGG | + | chr5_1:61364008-61364027 | Msa0741650:CDS | 30.0% |
| CTTTGTGATAACATACAACT+TGG | - | chr5_1:61364093-61364112 | None:intergenic | 30.0% | |
| CAACTTAAATCTTTGAACAC+TGG | + | chr5_1:61364218-61364237 | Msa0741650:CDS | 30.0% | |
| GTGGCTAATGAAACATAATA+TGG | - | chr5_1:61364275-61364294 | None:intergenic | 30.0% | |
| TCTAATATTTATGTGACGAG+TGG | - | chr5_1:61364294-61364313 | None:intergenic | 30.0% | |
| GAGAAGTGACATATTATGTT+TGG | + | chr5_1:61364312-61364331 | Msa0741650:CDS | 30.0% | |
| GATTTACCACTTATATGATG+AGG | - | chr5_1:61364356-61364375 | None:intergenic | 30.0% | |
| AAATCTCAAATCATCAACGA+CGG | + | chr5_1:61364371-61364390 | Msa0741650:CDS | 30.0% | |
| ACTTCAGGTATAAGTTTGAT+GGG | + | chr5_1:61364401-61364420 | Msa0741650:CDS | 30.0% | |
| ! | AAATTTGTTTACTGTCTCCA+GGG | + | chr5_1:61364571-61364590 | Msa0741650:CDS | 30.0% |
| !! | TGCTGAAGTTCTAAATCATT+TGG | - | chr5_1:61364641-61364660 | None:intergenic | 30.0% |
| ! | TTCTTATGAGTTTTCCATCA+CGG | - | chr5_1:61364670-61364689 | None:intergenic | 30.0% |
| AATGATGGTTACAATACTTC+CGG | + | chr5_1:61364854-61364873 | Msa0741650:CDS | 30.0% | |
| !! | ATGAGTTTGCTATCATGAAT+AGG | - | chr5_1:61365130-61365149 | None:intergenic | 30.0% |
| TTTATACACCAATACACCTT+GGG | + | chr5_1:61365168-61365187 | Msa0741650:CDS | 30.0% | |
| CAAATGGGAAGTGAAATAAA+AGG | - | chr5_1:61365214-61365233 | None:intergenic | 30.0% | |
| TATTCGTCTAAATAGAAGTG+AGG | + | chr5_1:61365867-61365886 | Msa0741650:three_prime_UTR | 30.0% | |
| TAAATAGAAGTGAGGTGAAA+TGG | + | chr5_1:61365875-61365894 | Msa0741650:three_prime_UTR | 30.0% | |
| AGAAACCTTTGTTACAACGA+TGG | + | chr5_1:61362134-61362153 | Msa0741650:exon | 35.0% | |
| TGATCACAACTCTTAATTGG+AGG | + | chr5_1:61362214-61362233 | Msa0741650:CDS | 35.0% | |
| GATCACAACTCTTAATTGGA+GGG | + | chr5_1:61362215-61362234 | Msa0741650:CDS | 35.0% | |
| !!! | TTTTTAGGATGTTGGCAACA+TGG | + | chr5_1:61362405-61362424 | Msa0741650:intron | 35.0% |
| !!! | TTTTAGGATGTTGGCAACAT+GGG | + | chr5_1:61362406-61362425 | Msa0741650:intron | 35.0% |
| ACAAAGCAAGCAAACCAATT+TGG | - | chr5_1:61362465-61362484 | None:intergenic | 35.0% | |
| AAGTAACCAACAACCGTAAA+TGG | + | chr5_1:61362505-61362524 | Msa0741650:intron | 35.0% | |
| ! | CTTTTTCCATTTACGGTTGT+TGG | - | chr5_1:61362514-61362533 | None:intergenic | 35.0% |
| GAGCTTCTCGATTAAAAACT+AGG | - | chr5_1:61362869-61362888 | None:intergenic | 35.0% | |
| ! | GAAAGAGATGGGTCAATTTT+CGG | + | chr5_1:61363390-61363409 | Msa0741650:CDS | 35.0% |
| GTGCAATATTTGAATGGGAT+CGG | + | chr5_1:61363412-61363431 | Msa0741650:CDS | 35.0% | |
| CAAAATCTCTTCGCATTGTA+GGG | - | chr5_1:61363524-61363543 | None:intergenic | 35.0% | |
| TCAAAATCTCTTCGCATTGT+AGG | - | chr5_1:61363525-61363544 | None:intergenic | 35.0% | |
| ATTTGGTATTCAAGTGGGAA+AGG | + | chr5_1:61363683-61363702 | Msa0741650:CDS | 35.0% | |
| TATTCAAGTGGGAAAGGAAT+TGG | + | chr5_1:61363689-61363708 | Msa0741650:CDS | 35.0% | |
| GGCAAAGGAAATGATTAATG+TGG | + | chr5_1:61363710-61363729 | Msa0741650:CDS | 35.0% | |
| CTTGTTTAGGAAGCGAAAAA+TGG | + | chr5_1:61363946-61363965 | Msa0741650:CDS | 35.0% | |
| !! | TGCTCACAAATTTGCTATTG+CGG | - | chr5_1:61364196-61364215 | None:intergenic | 35.0% |
| !! | TAGAAAAGTACTACCTGAGA+AGG | - | chr5_1:61364248-61364267 | None:intergenic | 35.0% |
| GACTTCAGGTATAAGTTTGA+TGG | + | chr5_1:61364400-61364419 | Msa0741650:CDS | 35.0% | |
| ATCCTTCAAGCTAGATAACT+GGG | - | chr5_1:61364435-61364454 | None:intergenic | 35.0% | |
| TATCCTTCAAGCTAGATAAC+TGG | - | chr5_1:61364436-61364455 | None:intergenic | 35.0% | |
| ! | TTATCTAGCTTGAAGGATAC+CGG | + | chr5_1:61364437-61364456 | Msa0741650:CDS | 35.0% |
| TTCTCATTAGCATACAGAAG+AGG | - | chr5_1:61364485-61364504 | None:intergenic | 35.0% | |
| CTGTATGCTAATGAGAATGT+TGG | + | chr5_1:61364488-61364507 | Msa0741650:CDS | 35.0% | |
| GATGGTTAGAAAGGAGAATA+TGG | + | chr5_1:61364523-61364542 | Msa0741650:CDS | 35.0% | |
| GAGAATATGGATCATGAAGA+CGG | + | chr5_1:61364536-61364555 | Msa0741650:CDS | 35.0% | |
| ! | CAAATTTGTTTACTGTCTCC+AGG | + | chr5_1:61364570-61364589 | Msa0741650:CDS | 35.0% |
| ! | GTGATGGAAAACTCATAAGA+AGG | + | chr5_1:61364669-61364688 | Msa0741650:CDS | 35.0% |
| TCACCTTGGGAAGTAAAAAA+AGG | + | chr5_1:61364716-61364735 | Msa0741650:CDS | 35.0% | |
| !!! | GATCCTTTTTTTACTTCCCA+AGG | - | chr5_1:61364722-61364741 | None:intergenic | 35.0% |
| GCTTGAAGAATGTAGCTTAT+CGG | + | chr5_1:61364912-61364931 | Msa0741650:CDS | 35.0% | |
| CTTGAAGAATGTAGCTTATC+GGG | + | chr5_1:61364913-61364932 | Msa0741650:CDS | 35.0% | |
| ! | GCAGTAATTTTCTCATTTGC+AGG | - | chr5_1:61365016-61365035 | None:intergenic | 35.0% |
| AAGAAATCTCTGCTGTTCTT+TGG | - | chr5_1:61365056-61365075 | None:intergenic | 35.0% | |
| ATGATAGCAAACTCATAAGC+AGG | + | chr5_1:61365134-61365153 | Msa0741650:CDS | 35.0% | |
| CTTTATACACCAATACACCT+TGG | + | chr5_1:61365167-61365186 | Msa0741650:CDS | 35.0% | |
| ! | AATCTTTTTGTTACGTCCCA+AGG | - | chr5_1:61365187-61365206 | None:intergenic | 35.0% |
| CTGATACTATCGAGACAAAT+GGG | - | chr5_1:61365229-61365248 | None:intergenic | 35.0% | |
| TCTGATACTATCGAGACAAA+TGG | - | chr5_1:61365230-61365249 | None:intergenic | 35.0% | |
| ! | TCTTTCAAGTAGTGAAACTC+AGG | + | chr5_1:61365297-61365316 | Msa0741650:CDS | 35.0% |
| GATAAATACCTAAGTTGCCT+AGG | - | chr5_1:61365430-61365449 | None:intergenic | 35.0% | |
| CTTGTTCTTCAGTATTTCCA+AGG | - | chr5_1:61365474-61365493 | None:intergenic | 35.0% | |
| !! | ATAATGAAGGTATCCAACTC+TGG | - | chr5_1:61365555-61365574 | None:intergenic | 35.0% |
| AGTTGGATACCTTCATTATC+TGG | + | chr5_1:61365556-61365575 | Msa0741650:CDS | 35.0% | |
| ATGGTTGACAAAGAGAACAA+GGG | + | chr5_1:61365658-61365677 | Msa0741650:CDS | 35.0% | |
| TGTTCCCTATGTTATTGCAA+AGG | - | chr5_1:61365685-61365704 | None:intergenic | 35.0% | |
| ! | ACTTGGCATTTTGCAAACTA+TGG | - | chr5_1:61365733-61365752 | None:intergenic | 35.0% |
| GTTTGCCATCGTTGTAACAA+AGG | - | chr5_1:61362142-61362161 | None:intergenic | 40.0% | |
| CTAAAGGAGGAACAACAACA+TGG | - | chr5_1:61362164-61362183 | None:intergenic | 40.0% | |
| AGAGTTGTGATCATGTTACG+AGG | - | chr5_1:61362207-61362226 | None:intergenic | 40.0% | |
| CATGCAATTGCAACTAGTGT+TGG | - | chr5_1:61362364-61362383 | None:intergenic | 40.0% | |
| AGTCTCTGATTGACAGCATA+AGG | - | chr5_1:61362950-61362969 | None:intergenic | 40.0% | |
| ! | AGCCATTGCAAGTCTTATAC+AGG | + | chr5_1:61363257-61363276 | Msa0741650:CDS | 40.0% |
| TGCCTGTATAAGACTTGCAA+TGG | - | chr5_1:61363262-61363281 | None:intergenic | 40.0% | |
| CTTTCTTGAACTTGATAGGC+AGG | + | chr5_1:61363287-61363306 | Msa0741650:CDS | 40.0% | |
| TTGAAGGGAATCCAAAAAGC+TGG | - | chr5_1:61363342-61363361 | None:intergenic | 40.0% | |
| TGTGTGGGCTTATACTTGAA+GGG | - | chr5_1:61363357-61363376 | None:intergenic | 40.0% | |
| TTGTGTGGGCTTATACTTGA+AGG | - | chr5_1:61363358-61363377 | None:intergenic | 40.0% | |
| ! | GGAGCACCAATTGGTTTAAA+TGG | - | chr5_1:61363462-61363481 | None:intergenic | 40.0% |
| !! | ACGATTTCCGTTTTGTTGCT+TGG | + | chr5_1:61363547-61363566 | Msa0741650:CDS | 40.0% |
| !! | CGATTTCCGTTTTGTTGCTT+GGG | + | chr5_1:61363548-61363567 | Msa0741650:CDS | 40.0% |
| AGCATTCCCAAGCAACAAAA+CGG | - | chr5_1:61363557-61363576 | None:intergenic | 40.0% | |
| GGAAGCAGAAATGTATGCAT+TGG | + | chr5_1:61363639-61363658 | Msa0741650:CDS | 40.0% | |
| AGCAGAAATGTATGCATTGG+AGG | + | chr5_1:61363642-61363661 | Msa0741650:CDS | 40.0% | |
| GCAGAAATGTATGCATTGGA+GGG | + | chr5_1:61363643-61363662 | Msa0741650:CDS | 40.0% | |
| !! | CATTCTTTAGGTGCTGGATT+TGG | + | chr5_1:61363666-61363685 | Msa0741650:CDS | 40.0% |
| ! | TGCTGGATTTGGTATTCAAG+TGG | + | chr5_1:61363677-61363696 | Msa0741650:CDS | 40.0% |
| ! | GCTGGATTTGGTATTCAAGT+GGG | + | chr5_1:61363678-61363697 | Msa0741650:CDS | 40.0% |
| ATAGCAAGTGAAACAGAAGG+TGG | - | chr5_1:61363753-61363772 | None:intergenic | 40.0% | |
| CTCATAGCAAGTGAAACAGA+AGG | - | chr5_1:61363756-61363775 | None:intergenic | 40.0% | |
| GCTATGAGCCTTGGAAATAT+TGG | + | chr5_1:61363768-61363787 | Msa0741650:CDS | 40.0% | |
| ACTTGAGGTTCACTACTTGA+AGG | - | chr5_1:61363837-61363856 | None:intergenic | 40.0% | |
| GATGTTCTCTCTTGTTCCAT+CGG | - | chr5_1:61364027-61364046 | None:intergenic | 40.0% | |
| AGGATCCATATTCTCCACAT+TGG | - | chr5_1:61364051-61364070 | None:intergenic | 40.0% | |
| GCTTCATTGTGCTCATTAGA+AGG | - | chr5_1:61364071-61364090 | None:intergenic | 40.0% | |
| CATGAGCTTCGAGAAATTTC+TGG | - | chr5_1:61364121-61364140 | None:intergenic | 40.0% | |
| CAGAAATTTCTCGAAGCTCA+TGG | + | chr5_1:61364119-61364138 | Msa0741650:CDS | 40.0% | |
| AAGCTCATGGCTTGAAACAA+TGG | + | chr5_1:61364132-61364151 | Msa0741650:CDS | 40.0% | |
| AAACAATGGTGGTCAAGTGA+CGG | + | chr5_1:61364146-61364165 | Msa0741650:CDS | 40.0% | |
| TGTGTGCCTCATCATATAAG+TGG | + | chr5_1:61364347-61364366 | Msa0741650:CDS | 40.0% | |
| ! | CAGGTATAAGTTTGATGGGT+TGG | + | chr5_1:61364405-61364424 | Msa0741650:CDS | 40.0% |
| TCCTTCAAGCTAGATAACTG+GGG | - | chr5_1:61364434-61364453 | None:intergenic | 40.0% | |
| ! | CTTGAAGGATACCGGTTATT+GGG | + | chr5_1:61364445-61364464 | Msa0741650:CDS | 40.0% |
| TGTCGTGAAGATGGTTAGAA+AGG | + | chr5_1:61364514-61364533 | Msa0741650:CDS | 40.0% | |
| ! | TTTTACTTCCCAAGGTGAAC+CGG | - | chr5_1:61364714-61364733 | None:intergenic | 40.0% |
| ! | TTCCTTTTCTGCAAGACACA+TGG | - | chr5_1:61364768-61364787 | None:intergenic | 40.0% |
| TTCCTTCAAGCAGTGAATCT+CGG | + | chr5_1:61364825-61364844 | Msa0741650:CDS | 40.0% | |
| GGTTTGATACCTCAGTTATC+TGG | + | chr5_1:61364890-61364909 | Msa0741650:CDS | 40.0% | |
| TTCTTCAAGCCAGATAACTG+AGG | - | chr5_1:61364902-61364921 | None:intergenic | 40.0% | |
| TTCTTGCCAACATACAGATG+AGG | - | chr5_1:61364953-61364972 | None:intergenic | 40.0% | |
| CTGTATGTTGGCAAGAATTG+TGG | + | chr5_1:61364956-61364975 | Msa0741650:CDS | 40.0% | |
| CAGAGATTTCTTTCTGCTCA+CGG | + | chr5_1:61365064-61365083 | Msa0741650:CDS | 40.0% | |
| AAGTGTACCATTGAAGAGCT+GGG | + | chr5_1:61365351-61365370 | Msa0741650:CDS | 40.0% | |
| TAAGTTGCCTAGGAACCAAT+TGG | - | chr5_1:61365420-61365439 | None:intergenic | 40.0% | |
| ! | AATTGGTTCCTAGGCAACTT+AGG | + | chr5_1:61365419-61365438 | Msa0741650:CDS | 40.0% |
| ACAAGACTTCATTCCAGAGT+TGG | + | chr5_1:61365539-61365558 | Msa0741650:CDS | 40.0% | |
| ! | ACCTTCATTATCTGGCTTGA+AGG | + | chr5_1:61365564-61365583 | Msa0741650:CDS | 40.0% |
| TCCTTCAAGCCAGATAATGA+AGG | - | chr5_1:61365568-61365587 | None:intergenic | 40.0% | |
| CTCTTGTCAGCATACAGATA+TGG | - | chr5_1:61365619-61365638 | None:intergenic | 40.0% | |
| TATCTGTATGCTGACAAGAG+TGG | + | chr5_1:61365619-61365638 | Msa0741650:CDS | 40.0% | |
| GATGGTTGACAAAGAGAACA+AGG | + | chr5_1:61365657-61365676 | Msa0741650:CDS | 40.0% | |
| AGGGTCCTTTGCAATAACAT+AGG | + | chr5_1:61365677-61365696 | Msa0741650:exon | 40.0% | |
| GGGTCCTTTGCAATAACATA+GGG | + | chr5_1:61365678-61365697 | Msa0741650:exon | 40.0% | |
| GGAACACCTCAAGTTAACAA+TGG | + | chr5_1:61365699-61365718 | Msa0741650:three_prime_UTR | 40.0% | |
| !! | GGGACTTCATTGATTCTAGC+TGG | + | chr5_1:61362235-61362254 | Msa0741650:CDS | 45.0% |
| GCTCTTTGTTCGTGTCAACA+CGG | - | chr5_1:61363071-61363090 | None:intergenic | 45.0% | |
| !! | ACTCTCTAGCTCCAGCTTTT+TGG | + | chr5_1:61363328-61363347 | Msa0741650:CDS | 45.0% |
| CTGAGTGCTAAAACAGCTCT+GGG | - | chr5_1:61363483-61363502 | None:intergenic | 45.0% | |
| TCTGAGTGCTAAAACAGCTC+TGG | - | chr5_1:61363484-61363503 | None:intergenic | 45.0% | |
| !!! | AGAGCTGTTTTAGCACTCAG+AGG | + | chr5_1:61363483-61363502 | Msa0741650:CDS | 45.0% |
| ! | TGTTGCTTGGGAATGCTTGA+AGG | + | chr5_1:61363560-61363579 | Msa0741650:CDS | 45.0% |
| !! | TGCATTGGAGGGCATTCTTT+AGG | + | chr5_1:61363654-61363673 | Msa0741650:CDS | 45.0% |
| AGTGGGAAAGGAATTGGCAA+AGG | + | chr5_1:61363695-61363714 | Msa0741650:CDS | 45.0% | |
| !! | GTTTCACTTGCTATGAGCCT+TGG | + | chr5_1:61363759-61363778 | Msa0741650:CDS | 45.0% |
| !! | ACCTCAAGTCAGCATTGATG+TGG | + | chr5_1:61363848-61363867 | Msa0741650:CDS | 45.0% |
| !! | TCCACATCAATGCTGACTTG+AGG | - | chr5_1:61363852-61363871 | None:intergenic | 45.0% |
| TGATGTGGACGAGACTTATG+TGG | + | chr5_1:61363863-61363882 | Msa0741650:CDS | 45.0% | |
| ! | CGCTTGATGGATGCTTGTTT+AGG | + | chr5_1:61363933-61363952 | Msa0741650:CDS | 45.0% |
| TCTCTCTTGTTCCATCGGTA+TGG | - | chr5_1:61364022-61364041 | None:intergenic | 45.0% | |
| AAGAGAGAACATCGCCAATG+TGG | + | chr5_1:61364034-61364053 | Msa0741650:CDS | 45.0% | |
| CATCGCCAATGTGGAGAATA+TGG | + | chr5_1:61364043-61364062 | Msa0741650:CDS | 45.0% | |
| CTCATGGCTTGAAACAATGG+TGG | + | chr5_1:61364135-61364154 | Msa0741650:CDS | 45.0% | |
| AACGACGGACAAATGACTTC+AGG | + | chr5_1:61364386-61364405 | Msa0741650:CDS | 45.0% | |
| ! | ACCCCAGTTATCTAGCTTGA+AGG | + | chr5_1:61364430-61364449 | Msa0741650:CDS | 45.0% |
| ! | GCTTGAAGGATACCGGTTAT+TGG | + | chr5_1:61364444-61364463 | Msa0741650:CDS | 45.0% |
| CCATTTCCACACCCAATAAC+CGG | - | chr5_1:61364459-61364478 | None:intergenic | 45.0% | |
| CGGTTATTGGGTGTGGAAAT+GGG | + | chr5_1:61364457-61364476 | Msa0741650:CDS | 45.0% | |
| AAGGAAGTTCAGTTGTTCCC+TGG | - | chr5_1:61364591-61364610 | None:intergenic | 45.0% | |
| ! | CAGCTCATGGTTTGGAACAA+TGG | + | chr5_1:61364612-61364631 | Msa0741650:CDS | 45.0% |
| ! | CTCATGGTTTGGAACAATGG+TGG | + | chr5_1:61364615-61364634 | Msa0741650:CDS | 45.0% |
| CTTCAGCAAACTATCCGTGA+TGG | + | chr5_1:61364653-61364672 | Msa0741650:CDS | 45.0% | |
| !! | TCTATACACCGGTTCACCTT+GGG | + | chr5_1:61364703-61364722 | Msa0741650:CDS | 45.0% |
| TGCCATGTGTCTTGCAGAAA+AGG | + | chr5_1:61364763-61364782 | Msa0741650:CDS | 45.0% | |
| TTCACTGCTTGAAGGAAGCA+TGG | - | chr5_1:61364822-61364841 | None:intergenic | 45.0% | |
| TCCTTCAAGCAGTGAATCTC+GGG | + | chr5_1:61364826-61364845 | Msa0741650:CDS | 45.0% | |
| GGTTACAATACTTCCGGTGT+TGG | + | chr5_1:61364860-61364879 | Msa0741650:CDS | 45.0% | |
| !! | TACTTCCGGTGTTGGTTTGA+AGG | + | chr5_1:61364868-61364887 | Msa0741650:CDS | 45.0% |
| !! | ACTTCCGGTGTTGGTTTGAA+GGG | + | chr5_1:61364869-61364888 | Msa0741650:CDS | 45.0% |
| CAAACCCTTCAAACCAACAC+CGG | - | chr5_1:61364876-61364895 | None:intergenic | 45.0% | |
| TGGGTTCCTCATCTGTATGT+TGG | + | chr5_1:61364944-61364963 | Msa0741650:CDS | 45.0% | |
| CAAGAATTGTGGCACAGAAG+AGG | + | chr5_1:61364967-61364986 | Msa0741650:CDS | 45.0% | |
| TGCTGAAGTTCTGCATCACT+TGG | - | chr5_1:61365106-61365125 | None:intergenic | 45.0% | |
| AAACTCATAAGCAGGCGAAC+TGG | + | chr5_1:61365142-61365161 | Msa0741650:CDS | 45.0% | |
| TGTTACGTCCCAAGGTGTAT+TGG | - | chr5_1:61365179-61365198 | None:intergenic | 45.0% | |
| CAAGTGTACCATTGAAGAGC+TGG | + | chr5_1:61365350-61365369 | Msa0741650:CDS | 45.0% | |
| TTCAGTATTTCCAAGGCTCG+TGG | - | chr5_1:61365467-61365486 | None:intergenic | 45.0% | |
| !!! | GCTTGAAGGATGCTGCTTTT+GGG | + | chr5_1:61365578-61365597 | Msa0741650:CDS | 45.0% |
| !!! | CTTGAAGGATGCTGCTTTTG+GGG | + | chr5_1:61365579-61365598 | Msa0741650:CDS | 45.0% |
| !!! | TGCTTTTGGGGTGGGAAAAT+TGG | + | chr5_1:61365591-61365610 | Msa0741650:CDS | 45.0% |
| TGGTGGAAAAGACGACAAGA+TGG | + | chr5_1:61365639-61365658 | Msa0741650:CDS | 45.0% | |
| TCGTGTCAACACGGTACTCT+TGG | - | chr5_1:61363062-61363081 | None:intergenic | 50.0% | |
| !! | ATCTGATGCAAAAGCACCGC+TGG | + | chr5_1:61363147-61363166 | Msa0741650:intron | 50.0% |
| !! | TGCAAAAGCACCGCTGGTTT+CGG | + | chr5_1:61363153-61363172 | Msa0741650:intron | 50.0% |
| GTAAATGCCACCGAAACCAG+CGG | - | chr5_1:61363166-61363185 | None:intergenic | 50.0% | |
| TCCATCAAGCGCGATAAACG+AGG | - | chr5_1:61363924-61363943 | None:intergenic | 50.0% | |
| GAACACTGGTACACCTTCTC+AGG | + | chr5_1:61364232-61364251 | Msa0741650:CDS | 50.0% | |
| ! | AGGATACCGGTTATTGGGTG+TGG | + | chr5_1:61364450-61364469 | Msa0741650:CDS | 50.0% |
| CCGGTTATTGGGTGTGGAAA+TGG | + | chr5_1:61364456-61364475 | Msa0741650:CDS | 50.0% | |
| CTGAACTTCCTTGCAGCTCA+TGG | + | chr5_1:61364599-61364618 | Msa0741650:CDS | 50.0% | |
| CTTCCTTGCAGCTCATGGTT+TGG | + | chr5_1:61364604-61364623 | Msa0741650:CDS | 50.0% | |
| GTTCCAAACCATGAGCTGCA+AGG | - | chr5_1:61364610-61364629 | None:intergenic | 50.0% | |
| !! | CTCTATACACCGGTTCACCT+TGG | + | chr5_1:61364702-61364721 | Msa0741650:CDS | 50.0% |
| ACCCGAGATTCACTGCTTGA+AGG | - | chr5_1:61364830-61364849 | None:intergenic | 50.0% | |
| GAATCTCGGGTGCTCAATGA+TGG | + | chr5_1:61364839-61364858 | Msa0741650:CDS | 50.0% | |
| TAGCTTATCGGGTGTGCGAA+TGG | + | chr5_1:61364924-61364943 | Msa0741650:CDS | 50.0% | |
| AGCTTATCGGGTGTGCGAAT+GGG | + | chr5_1:61364925-61364944 | Msa0741650:CDS | 50.0% | |
| GAATTGTGGCACAGAAGAGG+AGG | + | chr5_1:61364970-61364989 | Msa0741650:CDS | 50.0% | |
| CACAGAAGAGGAGGTTGACA+AGG | + | chr5_1:61364979-61364998 | Msa0741650:CDS | 50.0% | |
| GGAGGTTGACAAGGAGAATG+TGG | + | chr5_1:61364988-61365007 | Msa0741650:CDS | 50.0% | |
| CAATTGGACCACGGCATAAC+CGG | - | chr5_1:61365404-61365423 | None:intergenic | 50.0% | |
| CCTAGGAACCAATTGGACCA+CGG | - | chr5_1:61365413-61365432 | None:intergenic | 50.0% | |
| !!! | GGCTTGAAGGATGCTGCTTT+TGG | + | chr5_1:61365577-61365596 | Msa0741650:CDS | 50.0% |
| !!! | AAGGATGCTGCTTTTGGGGT+GGG | + | chr5_1:61365583-61365602 | Msa0741650:CDS | 50.0% |
| CTGTATGCTGACAAGAGTGG+TGG | + | chr5_1:61365622-61365641 | Msa0741650:CDS | 50.0% | |
| !! | AAAAGCACCGCTGGTTTCGG+TGG | + | chr5_1:61363156-61363175 | Msa0741650:intron | 55.0% |
| !! | ACAGCTCTGGGAGCACCAAT+TGG | - | chr5_1:61363471-61363490 | None:intergenic | 55.0% |
| !! | GGAGGGCATTCTTTAGGTGC+TGG | + | chr5_1:61363660-61363679 | Msa0741650:CDS | 55.0% |
| GCCTCGTTTATCGCGCTTGA+TGG | + | chr5_1:61363920-61363939 | Msa0741650:CDS | 55.0% | |
| TGTTGGCGCTGTCGTGAAGA+TGG | + | chr5_1:61364505-61364524 | Msa0741650:CDS | 55.0% | |
| CTGCTCACGGCTTGCAACAA+TGG | + | chr5_1:61365077-61365096 | Msa0741650:CDS | 55.0% | |
| CTCACGGCTTGCAACAATGG+TGG | + | chr5_1:61365080-61365099 | Msa0741650:CDS | 55.0% | |
| !! | GAAGGCACCCAGCTCTTCAA+TGG | - | chr5_1:61365361-61365380 | None:intergenic | 55.0% |
| CGGTTATGCCGTGGTCCAAT+TGG | + | chr5_1:61365402-61365421 | Msa0741650:CDS | 55.0% | |
| ! | CCGTGGTCCAATTGGTTCCT+AGG | + | chr5_1:61365410-61365429 | Msa0741650:CDS | 55.0% |
| GTATTTCCAAGGCTCGTGGC+TGG | - | chr5_1:61365463-61365482 | None:intergenic | 55.0% | |
| !!! | GAAGGATGCTGCTTTTGGGG+TGG | + | chr5_1:61365582-61365601 | Msa0741650:CDS | 55.0% |
| AGCTGGGTGCCTTCACTGTC+AGG | + | chr5_1:61365367-61365386 | Msa0741650:CDS | 60.0% | |
| TGCCTTCACTGTCAGGCCTC+AGG | + | chr5_1:61365374-61365393 | Msa0741650:CDS | 60.0% | |
| GCCTTCACTGTCAGGCCTCA+GGG | + | chr5_1:61365375-61365394 | Msa0741650:CDS | 60.0% | |
| TCCCTGAGGCCTGACAGTGA+AGG | - | chr5_1:61365379-61365398 | None:intergenic | 60.0% | |
| CTGTCAGGCCTCAGGGATAC+CGG | + | chr5_1:61365382-61365401 | Msa0741650:CDS | 60.0% | |
| CGGCATAACCGGTATCCCTG+AGG | - | chr5_1:61365393-61365412 | None:intergenic | 60.0% | |
| ! | CAGGGATACCGGTTATGCCG+TGG | + | chr5_1:61365393-61365412 | Msa0741650:CDS | 60.0% |
| GCTCGTGGCTGGAGCAACAA+AGG | - | chr5_1:61365452-61365471 | None:intergenic | 60.0% | |
| GTTGCTCCAGCCACGAGCCT+TGG | + | chr5_1:61365454-61365473 | Msa0741650:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 61362093 | 61365957 | 61362093 | ID=Msa0741650;Name=Msa0741650 |
| chr5_1 | mRNA | 61362093 | 61365957 | 61362093 | ID=Msa0741650-mRNA-1;Parent=Msa0741650;Name=Msa0741650-mRNA-1;_AED=0.17;_eAED=0.17;_QI=60|0|0.66|0.66|1|1|3|264|890 |
| chr5_1 | exon | 61362093 | 61362256 | 61362093 | ID=Msa0741650-mRNA-1:exon:17734;Parent=Msa0741650-mRNA-1 |
| chr5_1 | exon | 61362412 | 61362519 | 61362412 | ID=Msa0741650-mRNA-1:exon:17735;Parent=Msa0741650-mRNA-1 |
| chr5_1 | exon | 61363233 | 61365957 | 61363233 | ID=Msa0741650-mRNA-1:exon:17736;Parent=Msa0741650-mRNA-1 |
| chr5_1 | five_prime_UTR | 61362093 | 61362152 | 61362093 | ID=Msa0741650-mRNA-1:five_prime_utr;Parent=Msa0741650-mRNA-1 |
| chr5_1 | CDS | 61362153 | 61362256 | 61362153 | ID=Msa0741650-mRNA-1:cds;Parent=Msa0741650-mRNA-1 |
| chr5_1 | CDS | 61362412 | 61362519 | 61362412 | ID=Msa0741650-mRNA-1:cds;Parent=Msa0741650-mRNA-1 |
| chr5_1 | CDS | 61363233 | 61365693 | 61363233 | ID=Msa0741650-mRNA-1:cds;Parent=Msa0741650-mRNA-1 |
| chr5_1 | three_prime_UTR | 61365694 | 61365957 | 61365694 | ID=Msa0741650-mRNA-1:three_prime_utr;Parent=Msa0741650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
