Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320500 | XP_013463256.1 | 97.931 | 145 | 2 | 1 | 3 | 147 | 5 | 148 | 5.67e-93 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0320500 | 0.831826 | 1.339665e-55 | -8.615850e-47 |
| Msa0001940 | Msa0320500 | 0.815191 | 1.049040e-51 | -8.615850e-47 |
| Msa0001960 | Msa0320500 | 0.800973 | 1.120802e-48 | -8.615850e-47 |
| Msa0017670 | Msa0320500 | 0.808488 | 3.022485e-50 | -8.615850e-47 |
| Msa0017950 | Msa0320500 | 0.809222 | 2.105008e-50 | -8.615850e-47 |
| Msa0027820 | Msa0320500 | 0.808467 | 3.052935e-50 | -8.615850e-47 |
| Msa0048510 | Msa0320500 | 0.811352 | 7.308954e-51 | -8.615850e-47 |
| Msa0077340 | Msa0320500 | 0.845092 | 5.039085e-59 | -8.615850e-47 |
| Msa0093850 | Msa0320500 | 0.812990 | 3.209491e-51 | -8.615850e-47 |
| Msa0094780 | Msa0320500 | 0.828005 | 1.143252e-54 | -8.615850e-47 |
| Msa0098040 | Msa0320500 | 0.830316 | 3.146237e-55 | -8.615850e-47 |
| Msa0106620 | Msa0320500 | 0.813892 | 2.033282e-51 | -8.615850e-47 |
| Msa0106710 | Msa0320500 | 0.808697 | 2.726654e-50 | -8.615850e-47 |
| Msa0123070 | Msa0320500 | 0.801415 | 9.100384e-49 | -8.615850e-47 |
| Msa0175750 | Msa0320500 | 0.800114 | 1.677535e-48 | -8.615850e-47 |
| Msa0214550 | Msa0320500 | 0.808051 | 3.744466e-50 | -8.615850e-47 |
| Msa0217700 | Msa0320500 | 0.802266 | 6.086944e-49 | -8.615850e-47 |
| Msa0221000 | Msa0320500 | 0.804229 | 2.387450e-49 | -8.615850e-47 |
| Msa0225860 | Msa0320500 | 0.812852 | 3.441058e-51 | -8.615850e-47 |
| Msa0231600 | Msa0320500 | 0.806361 | 8.539766e-50 | -8.615850e-47 |
| Msa0240900 | Msa0320500 | 0.836877 | 7.230496e-57 | -8.615850e-47 |
| Msa0241630 | Msa0320500 | 0.804735 | 1.872578e-49 | -8.615850e-47 |
| Msa0244640 | Msa0320500 | 0.832598 | 8.629460e-56 | -8.615850e-47 |
| Msa0251710 | Msa0320500 | 0.818019 | 2.439028e-52 | -8.615850e-47 |
| Msa0261170 | Msa0320500 | 0.805547 | 1.266496e-49 | -8.615850e-47 |
| Msa0266180 | Msa0320500 | 0.808994 | 2.355621e-50 | -8.615850e-47 |
| Msa0274980 | Msa0320500 | 0.820073 | 8.316362e-53 | -8.615850e-47 |
| Msa0278570 | Msa0320500 | 0.817835 | 2.683575e-52 | -8.615850e-47 |
| Msa0283330 | Msa0320500 | 0.804491 | 2.106372e-49 | -8.615850e-47 |
| Msa0296820 | Msa0320500 | 0.810410 | 1.168749e-50 | -8.615850e-47 |
| Msa0298410 | Msa0320500 | 0.812506 | 4.096895e-51 | -8.615850e-47 |
| Msa0300320 | Msa0320500 | 0.800443 | 1.437879e-48 | -8.615850e-47 |
| Msa0307270 | Msa0320500 | 0.814673 | 1.366423e-51 | -8.615850e-47 |
| Msa0307670 | Msa0320500 | 0.806512 | 7.936976e-50 | -8.615850e-47 |
| Msa0317970 | Msa0320500 | 0.824700 | 7.002970e-54 | -8.615850e-47 |
| Msa0320500 | Msa0321620 | 0.819964 | 8.809767e-53 | -8.615850e-47 |
| Msa0320500 | Msa0340500 | 0.803266 | 3.784640e-49 | -8.615850e-47 |
| Msa0320500 | Msa0341690 | 0.824796 | 6.646115e-54 | -8.615850e-47 |
| Msa0320500 | Msa0361910 | 0.857110 | 2.039912e-62 | -8.615850e-47 |
| Msa0320500 | Msa0369790 | 0.847840 | 8.961999e-60 | -8.615850e-47 |
| Msa0320500 | Msa0372810 | 0.807171 | 5.757844e-50 | -8.615850e-47 |
| Msa0320500 | Msa0378720 | 0.808001 | 3.837838e-50 | -8.615850e-47 |
| Msa0320500 | Msa0408360 | 0.805027 | 1.627422e-49 | -8.615850e-47 |
| Msa0320500 | Msa0412790 | 0.803744 | 3.012630e-49 | -8.615850e-47 |
| Msa0320500 | Msa0430750 | 0.806004 | 1.015215e-49 | -8.615850e-47 |
| Msa0320500 | Msa0450400 | -0.813667 | 2.279598e-51 | -8.615850e-47 |
| Msa0320500 | Msa0464000 | 0.847303 | 1.259303e-59 | -8.615850e-47 |
| Msa0320500 | Msa0474730 | 0.808382 | 3.183743e-50 | -8.615850e-47 |
| Msa0320500 | Msa0509550 | 0.847542 | 1.082448e-59 | -8.615850e-47 |
| Msa0320500 | Msa0529030 | 0.831623 | 1.503030e-55 | -8.615850e-47 |
| Msa0320500 | Msa0534400 | 0.800765 | 1.236126e-48 | -8.615850e-47 |
| Msa0320500 | Msa0534720 | 0.808314 | 3.292268e-50 | -8.615850e-47 |
| Msa0320500 | Msa0555190 | 0.803646 | 3.156324e-49 | -8.615850e-47 |
| Msa0320500 | Msa0580370 | 0.837967 | 3.802570e-57 | -8.615850e-47 |
| Msa0320500 | Msa0581470 | 0.818730 | 1.683168e-52 | -8.615850e-47 |
| Msa0320500 | Msa0582480 | 0.802531 | 5.366915e-49 | -8.615850e-47 |
| Msa0320500 | Msa0583360 | -0.832573 | 8.752512e-56 | -8.615850e-47 |
| Msa0320500 | Msa0611210 | 0.801728 | 7.852227e-49 | -8.615850e-47 |
| Msa0320500 | Msa0624900 | 0.840222 | 9.900082e-58 | -8.615850e-47 |
| Msa0320500 | Msa0638480 | 0.807422 | 5.095012e-50 | -8.615850e-47 |
| Msa0320500 | Msa0649200 | 0.812422 | 4.274135e-51 | -8.615850e-47 |
| Msa0320500 | Msa0651550 | 0.805268 | 1.449236e-49 | -8.615850e-47 |
| Msa0320500 | Msa0660370 | 0.808520 | 2.974587e-50 | -8.615850e-47 |
| Msa0320500 | Msa0674480 | 0.837813 | 4.164308e-57 | -8.615850e-47 |
| Msa0320500 | Msa0693330 | 0.818470 | 1.928111e-52 | -8.615850e-47 |
| Msa0320500 | Msa0695270 | 0.830317 | 3.143597e-55 | -8.615850e-47 |
| Msa0320500 | Msa0702720 | 0.832121 | 1.132267e-55 | -8.615850e-47 |
| Msa0320500 | Msa0734250 | 0.801489 | 8.790001e-49 | -8.615850e-47 |
| Msa0320500 | Msa0770330 | 0.840690 | 7.467798e-58 | -8.615850e-47 |
| Msa0320500 | Msa0780570 | 0.817174 | 3.780081e-52 | -8.615850e-47 |
| Msa0320500 | Msa0792370 | 0.801121 | 1.045528e-48 | -8.615850e-47 |
| Msa0320500 | Msa0795750 | 0.827368 | 1.626360e-54 | -8.615850e-47 |
| Msa0320500 | Msa0795870 | 0.832507 | 9.088488e-56 | -8.615850e-47 |
| Msa0320500 | Msa0815970 | 0.815360 | 9.621602e-52 | -8.615850e-47 |
| Msa0320500 | Msa0822730 | 0.806417 | 8.309549e-50 | -8.615850e-47 |
| Msa0320500 | Msa0833530 | 0.878091 | 3.716129e-69 | -8.615850e-47 |
| Msa0320500 | Msa0833650 | 0.837170 | 6.087776e-57 | -8.615850e-47 |
| Msa0320500 | Msa0861850 | 0.802546 | 5.330395e-49 | -8.615850e-47 |
| Msa0320500 | Msa0878280 | 0.827715 | 1.342640e-54 | -8.615850e-47 |
| Msa0320500 | Msa0934140 | 0.811486 | 6.835492e-51 | -8.615850e-47 |
| Msa0320500 | Msa1000920 | 0.845030 | 5.236309e-59 | -8.615850e-47 |
| Msa0320500 | Msa1034500 | 0.823107 | 1.655321e-53 | -8.615850e-47 |
| Msa0320500 | Msa1034860 | 0.812486 | 4.138788e-51 | -8.615850e-47 |
| Msa0320500 | Msa1071180 | -0.805167 | 1.521653e-49 | -8.615850e-47 |
| Msa0320500 | Msa1089450 | 0.822266 | 2.597229e-53 | -8.615850e-47 |
| Msa0320500 | Msa1111380 | 0.842183 | 3.020336e-58 | -8.615850e-47 |
| Msa0320500 | Msa1132840 | 0.838374 | 2.986920e-57 | -8.615850e-47 |
| Msa0320500 | Msa1143370 | -0.807054 | 6.096096e-50 | -8.615850e-47 |
| Msa0320500 | Msa1145810 | 0.800198 | 1.612711e-48 | -8.615850e-47 |
| Msa0320500 | Msa1155170 | -0.811376 | 7.220657e-51 | -8.615850e-47 |
| Msa0320500 | Msa1160920 | 0.804003 | 2.661606e-49 | -8.615850e-47 |
| Msa0320500 | Msa1184120 | 0.805968 | 1.033327e-49 | -8.615850e-47 |
| Msa0320500 | Msa1186020 | 0.817689 | 2.894163e-52 | -8.615850e-47 |
| Msa0320500 | Msa1219000 | 0.801732 | 7.838021e-49 | -8.615850e-47 |
| Msa0320500 | Msa1225860 | -0.831500 | 1.611863e-55 | -8.615850e-47 |
| Msa0320500 | Msa1228200 | 0.818069 | 2.375312e-52 | -8.615850e-47 |
| Msa0320500 | Msa1265590 | 0.813098 | 3.039628e-51 | -8.615850e-47 |
| Msa0320500 | Msa1303560 | 0.803799 | 2.933886e-49 | -8.615850e-47 |
| Msa0320500 | Msa1307630 | 0.810954 | 8.917085e-51 | -8.615850e-47 |
| Msa0320500 | Msa1321550 | 0.808925 | 2.436762e-50 | -8.615850e-47 |
| Msa0320500 | Msa1332760 | 0.800707 | 1.270241e-48 | -8.615850e-47 |
| Msa0320500 | Msa1340200 | 0.801747 | 7.782682e-49 | -8.615850e-47 |
| Msa0320500 | Msa1341840 | 0.834079 | 3.688327e-56 | -8.615850e-47 |
| Msa0320500 | Msa1345670 | 0.817120 | 3.887576e-52 | -8.615850e-47 |
| Msa0320500 | Msa1346530 | 0.837080 | 6.417603e-57 | -8.615850e-47 |
| Msa0320500 | Msa1356600 | -0.805292 | 1.432427e-49 | -8.615850e-47 |
| Msa0320500 | Msa1371910 | 0.808894 | 2.474356e-50 | -8.615850e-47 |
| Msa0320500 | Msa1373100 | 0.800769 | 1.233736e-48 | -8.615850e-47 |
| Msa0320500 | Msa1375280 | 0.808330 | 3.265907e-50 | -8.615850e-47 |
| Msa0320500 | Msa1383530 | 0.805430 | 1.340057e-49 | -8.615850e-47 |
| Msa0320500 | Msa1383680 | 0.801167 | 1.022899e-48 | -8.615850e-47 |
| Msa0320500 | Msa1389900 | 0.800345 | 1.505519e-48 | -8.615850e-47 |
| Msa0320500 | Msa1391500 | 0.800968 | 1.123611e-48 | -8.615850e-47 |
| Msa0320500 | Msa1403710 | 0.819039 | 1.431833e-52 | -8.615850e-47 |
| Msa0320500 | Msa1405460 | 0.835796 | 1.362395e-56 | -8.615850e-47 |
| Msa0320500 | Msa1422950 | 0.800993 | 1.110332e-48 | -8.615850e-47 |
| Msa0320500 | Msa1440310 | 0.846902 | 1.621727e-59 | -8.615850e-47 |
| Msa0320500 | Msa1440880 | 0.819960 | 8.826961e-53 | -8.615850e-47 |
| Msa0320500 | Msa1445910 | -0.817090 | 3.948532e-52 | -8.615850e-47 |
| Msa0320500 | Msa1461370 | 0.800844 | 1.190868e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320500 | MtrunA17_Chr2g0296011 | 97.931 | 145 | 2 | 1 | 3 | 147 | 5 | 148 | 5.21e-97 | 276 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320500 | AT4G15790.1 | 54.967 | 151 | 54 | 3 | 3 | 147 | 5 | 147 | 8.66e-46 | 146 |
| Msa0320500 | AT4G15790.2 | 45.109 | 184 | 54 | 4 | 3 | 147 | 5 | 180 | 7.84e-39 | 130 |
Find 52 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCCTAGGGTTCGAGAATT+AGG | 0.173006 | 2_4:+21046823 | None:intergenic |
| TCCTCCTCCTTTGGTAATAC+TGG | 0.187408 | 2_4:+21043306 | None:intergenic |
| ATGCTAGCTTAAGAAACATT+AGG | 0.285076 | 2_4:-21043495 | Msa0320500:CDS |
| CGACATTAAGTGTTTGCTTA+AGG | 0.328554 | 2_4:+21043675 | None:intergenic |
| ATCCTAGGGTTCGAGAATTA+GGG | 0.352544 | 2_4:+21046824 | None:intergenic |
| TGCTAGCTTAAGAAACATTA+GGG | 0.356810 | 2_4:-21043494 | Msa0320500:intron |
| GAATCAAGGTCCGAGCTTCT+TGG | 0.380261 | 2_4:-21046501 | Msa0320500:CDS |
| TATTGAACACAAAGAGTAAC+AGG | 0.383335 | 2_4:+21043095 | None:intergenic |
| TAGAATTCAAAGTTTGAAAC+AGG | 0.385367 | 2_4:-21046478 | Msa0320500:intron |
| AGAGAAGGAGCTGTGGAATC+AGG | 0.387365 | 2_4:+21046782 | None:intergenic |
| TGGAATCAGGTGAAGACATT+GGG | 0.393095 | 2_4:+21046795 | None:intergenic |
| TCATGTGTGTTTGTATTAGT+AGG | 0.397213 | 2_4:-21043196 | Msa0320500:three_prime_UTR |
| GATAAGTATTGTTGCCTTGT+TGG | 0.400718 | 2_4:+21046870 | None:intergenic |
| ATTACTAGGATTTGCAAGGT+TGG | 0.464153 | 2_4:-21046355 | Msa0320500:intron |
| AGGGTTCGAGAATTAGGGTT+TGG | 0.474264 | 2_4:+21046829 | None:intergenic |
| GTTGCCTTGTTGGTCGGTGA+TGG | 0.479981 | 2_4:+21046880 | None:intergenic |
| CTCAGGAACTTAATGAATCA+AGG | 0.488414 | 2_4:-21046515 | Msa0320500:intron |
| GCAAGGTTGGAGGTCAAAGT+TGG | 0.498307 | 2_4:-21046342 | Msa0320500:CDS |
| TTTGCCAAATAAGCCCTTAG+TGG | 0.501733 | 2_4:-21047053 | None:intergenic |
| GAGAGGGAGAGAAGGAGCTG+TGG | 0.502514 | 2_4:+21046775 | None:intergenic |
| TTATCTCCTCCTACCCACTA+AGG | 0.502963 | 2_4:+21047039 | None:intergenic |
| GACATTGGGGATCTGATCCT+AGG | 0.509850 | 2_4:+21046809 | None:intergenic |
| TAGCAAACACCCCAAACAAA+AGG | 0.510584 | 2_4:+21043254 | None:intergenic |
| GTGGATGAGAGAGGGAGAGA+AGG | 0.522013 | 2_4:+21046767 | None:intergenic |
| ACTAGGATTTGCAAGGTTGG+AGG | 0.527934 | 2_4:-21046352 | Msa0320500:intron |
| AATGATTACTAGGATTTGCA+AGG | 0.536838 | 2_4:-21046359 | Msa0320500:intron |
| CTCTTGTTGCTGCTGAAGAG+TGG | 0.539219 | 2_4:+21043525 | None:intergenic |
| GCCAGTATTACCAAAGGAGG+AGG | 0.543767 | 2_4:-21043307 | Msa0320500:CDS |
| GATGAAATGACCAATGGAAG+AGG | 0.543968 | 2_4:+21046902 | None:intergenic |
| GTGGAATCAGGTGAAGACAT+TGG | 0.550371 | 2_4:+21046794 | None:intergenic |
| ATTAGGAATTTCAAGATCTG+AGG | 0.557465 | 2_4:-21043549 | Msa0320500:intron |
| AAAGTTGGATACACAAGTCA+AGG | 0.560365 | 2_4:-21046327 | Msa0320500:CDS |
| TTGAATTCTACCAAGAAGCT+CGG | 0.560984 | 2_4:+21046491 | None:intergenic |
| AACGATACATACGATTCATT+AGG | 0.561365 | 2_4:+21047003 | None:intergenic |
| CAAATAAGCCCTTAGTGGGT+AGG | 0.563231 | 2_4:-21047048 | None:intergenic |
| TATCTCCTCCTACCCACTAA+GGG | 0.566120 | 2_4:+21047040 | None:intergenic |
| TTGCCAAATAAGCCCTTAGT+GGG | 0.575053 | 2_4:-21047052 | None:intergenic |
| AGTATTGTTGCCTTGTTGGT+CGG | 0.585537 | 2_4:+21046874 | None:intergenic |
| GACTCACAGTGGATGAGAGA+GGG | 0.585993 | 2_4:+21046759 | None:intergenic |
| ACATTGGGGATCTGATCCTA+GGG | 0.598224 | 2_4:+21046810 | None:intergenic |
| ATAAGCCCTTAGTGGGTAGG+AGG | 0.600753 | 2_4:-21047045 | None:intergenic |
| CACTCTTCAGCAGCAACAAG+AGG | 0.604456 | 2_4:-21043524 | Msa0320500:CDS |
| GGACTCACAGTGGATGAGAG+AGG | 0.605991 | 2_4:+21046758 | None:intergenic |
| AACCCTAATTCTCGAACCCT+AGG | 0.611830 | 2_4:-21046826 | Msa0320500:five_prime_UTR |
| ATACATACGATTCATTAGGC+GGG | 0.613625 | 2_4:+21047007 | None:intergenic |
| GATACATACGATTCATTAGG+CGG | 0.615964 | 2_4:+21047006 | None:intergenic |
| GCAGCCAGTATTACCAAAGG+AGG | 0.620030 | 2_4:-21043310 | Msa0320500:CDS |
| AGAGCAGCCAGTATTACCAA+AGG | 0.629734 | 2_4:-21043313 | Msa0320500:CDS |
| TAAGATAGAAGAAATTGTCA+AGG | 0.632308 | 2_4:-21043337 | Msa0320500:CDS |
| GTGATGGATGAAATGACCAA+TGG | 0.635260 | 2_4:+21046896 | None:intergenic |
| TCATCCATCACCGACCAACA+AGG | 0.665077 | 2_4:-21046884 | Msa0320500:five_prime_UTR |
| GGAATCAGGTGAAGACATTG+GGG | 0.668347 | 2_4:+21046796 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATATAAAATATAAAAGA+AGG | + | chr2_4:21045516-21045535 | None:intergenic | 10.0% |
| !! | GAAAAACAATAGAATAAAAT+GGG | + | chr2_4:21043409-21043428 | None:intergenic | 15.0% |
| !! | TGAAAAACAATAGAATAAAA+TGG | + | chr2_4:21043410-21043429 | None:intergenic | 15.0% |
| !! | AATTAATCACAAAAACATTA+TGG | - | chr2_4:21043548-21043567 | Msa0320500:intron | 15.0% |
| !!! | TTTTTGTTTTGTTTTGTTTT+TGG | - | chr2_4:21043731-21043750 | Msa0320500:intron | 15.0% |
| !! | ATTATTAAAAAAGAGAGAAA+AGG | + | chr2_4:21044184-21044203 | None:intergenic | 15.0% |
| !!! | TTATTTTATGACCAAATATT+AGG | - | chr2_4:21044447-21044466 | Msa0320500:intron | 15.0% |
| !! | AATATAAAATTGAATTGGAT+AGG | + | chr2_4:21045001-21045020 | None:intergenic | 15.0% |
| !! | AATAAAACTATAAGTTTACT+TGG | + | chr2_4:21045115-21045134 | None:intergenic | 15.0% |
| !!! | TTGTTTTTGAAAACAAAATT+AGG | - | chr2_4:21046554-21046573 | Msa0320500:intron | 15.0% |
| !! | AATTAATGAATCACATGAAA+AGG | + | chr2_4:21043673-21043692 | None:intergenic | 20.0% |
| !! | TGATTCATTAATTAGTTCAT+GGG | - | chr2_4:21043680-21043699 | Msa0320500:CDS | 20.0% |
| !! | AATGATTAAGAAATACCTTA+TGG | + | chr2_4:21044638-21044657 | None:intergenic | 20.0% |
| !! | TTCTTAATCATTGTATCAAA+AGG | - | chr2_4:21044646-21044665 | Msa0320500:intron | 20.0% |
| !! | GTGCTAATATAAAATTGAAT+TGG | + | chr2_4:21045006-21045025 | None:intergenic | 20.0% |
| !! | TTATTCCTTATACATACATT+TGG | - | chr2_4:21045210-21045229 | Msa0320500:intron | 20.0% |
| !! | AAATACCAAATGTATGTATA+AGG | + | chr2_4:21045218-21045237 | None:intergenic | 20.0% |
| !! | TTATACATACATTTGGTATT+TGG | - | chr2_4:21045217-21045236 | Msa0320500:intron | 20.0% |
| !! | AGAAAAAAAACTTCACATTA+GGG | + | chr2_4:21045244-21045263 | None:intergenic | 20.0% |
| !! | AAGAAAAAAAACTTCACATT+AGG | + | chr2_4:21045245-21045264 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTTCTTTCTTTC+AGG | - | chr2_4:21045251-21045270 | Msa0320500:intron | 20.0% |
| !!! | AGTTTTTTTTCTTTCTTTCA+GGG | - | chr2_4:21045252-21045271 | Msa0320500:intron | 20.0% |
| !!! | AATTGTTTTTACAATCAAAG+AGG | - | chr2_4:21045330-21045349 | Msa0320500:intron | 20.0% |
| !!! | ATTGTTTTTACAATCAAAGA+GGG | - | chr2_4:21045331-21045350 | Msa0320500:intron | 20.0% |
| !! | AACTAGCTATACTTAATTAA+GGG | + | chr2_4:21045848-21045867 | None:intergenic | 20.0% |
| !! | CTCTGTTAAAAGTTAAAAAT+GGG | + | chr2_4:21045880-21045899 | None:intergenic | 20.0% |
| !! | ACTCTGTTAAAAGTTAAAAA+TGG | + | chr2_4:21045881-21045900 | None:intergenic | 20.0% |
| !!! | CATAATAAAGATATTTCTAC+AGG | + | chr2_4:21045922-21045941 | None:intergenic | 20.0% |
| !! | CAGACATAAAATAAAGATAA+GGG | + | chr2_4:21046204-21046223 | None:intergenic | 20.0% |
| !! | ACAGACATAAAATAAAGATA+AGG | + | chr2_4:21046205-21046224 | None:intergenic | 20.0% |
| !! | TAACTAAATTAAGTATTCGA+AGG | + | chr2_4:21046689-21046708 | None:intergenic | 20.0% |
| !!! | TACTTAATTTTCAGCTATTT+TGG | + | chr2_4:21046845-21046864 | None:intergenic | 20.0% |
| !!! | AAGTAATTCAGTTTTTCTTA+GGG | + | chr2_4:21046905-21046924 | None:intergenic | 20.0% |
| !!! | GTTTCTGTTTATTTTAACGT+TGG | - | chr2_4:21043185-21043204 | Msa0320500:three_prime_UTR | 25.0% |
| !! | AAAGAAAAGCATAAAAGAAG+AGG | + | chr2_4:21043386-21043405 | None:intergenic | 25.0% |
| !!! | TTCTGAAATGGAAAAAAAGA+AGG | + | chr2_4:21043459-21043478 | None:intergenic | 25.0% |
| !!! | TTCTTTTTTTCCATTTCAGA+AGG | - | chr2_4:21043458-21043477 | Msa0320500:intron | 25.0% |
| ! | GACAAAAATAAACATGATGT+TGG | + | chr2_4:21043583-21043602 | None:intergenic | 25.0% |
| !!! | ATGTTTATTTTTGTCATCTC+AGG | - | chr2_4:21043588-21043607 | Msa0320500:intron | 25.0% |
| !! | TAGAATTCAAAGTTTGAAAC+AGG | - | chr2_4:21043642-21043661 | Msa0320500:intron | 25.0% |
| ! | GTGATTCATTAATTAGTTCA+TGG | - | chr2_4:21043679-21043698 | Msa0320500:CDS | 25.0% |
| ! | AACAAAAATTCAGCTAAGAA+TGG | + | chr2_4:21043719-21043738 | None:intergenic | 25.0% |
| ! | AACATTTCATCTTTAGTGAT+AGG | + | chr2_4:21043920-21043939 | None:intergenic | 25.0% |
| ! | TTTCATAGGGTAAACAAATA+TGG | + | chr2_4:21044120-21044139 | None:intergenic | 25.0% |
| ! | AAAAAGAGAGAAAAGGTTTA+GGG | + | chr2_4:21044177-21044196 | None:intergenic | 25.0% |
| ! | AAAAAAGAGAGAAAAGGTTT+AGG | + | chr2_4:21044178-21044197 | None:intergenic | 25.0% |
| !! | TTTTAATAATAACTCCCAAG+TGG | - | chr2_4:21044194-21044213 | Msa0320500:intron | 25.0% |
| ! | CAAACATGGTATAATATCAT+AGG | + | chr2_4:21044275-21044294 | None:intergenic | 25.0% |
| !!! | ATCTTCTATGCTTTTTTTCT+TGG | - | chr2_4:21044602-21044621 | Msa0320500:intron | 25.0% |
| !! | TTGATTTTATCCTTTCTGTT+TGG | + | chr2_4:21044775-21044794 | None:intergenic | 25.0% |
| ! | TTAGCACAAAATACAGATTT+AGG | - | chr2_4:21045019-21045038 | Msa0320500:intron | 25.0% |
| !! | TTTGCTATAAAGGTTATTCA+AGG | - | chr2_4:21045173-21045192 | Msa0320500:intron | 25.0% |
| ! | TTGCTATAAAGGTTATTCAA+GGG | - | chr2_4:21045174-21045193 | Msa0320500:intron | 25.0% |
| !!! | GTTTTTTTTCTTTCTTTCAG+GGG | - | chr2_4:21045253-21045272 | Msa0320500:intron | 25.0% |
| !! | TGTTTCTATAAGCTATCTTA+AGG | - | chr2_4:21045388-21045407 | Msa0320500:intron | 25.0% |
| ! | ACTTATAACATATCCATAAG+TGG | + | chr2_4:21045437-21045456 | None:intergenic | 25.0% |
| ! | GTGTATATTTCAGTTTACAA+TGG | + | chr2_4:21045758-21045777 | None:intergenic | 25.0% |
| !! | AGTTAACTGTATACTGATTA+CGG | - | chr2_4:21045805-21045824 | Msa0320500:intron | 25.0% |
| ! | TTAAGGGTAGAAAATACTTT+GGG | + | chr2_4:21045832-21045851 | None:intergenic | 25.0% |
| ! | ATTAAGGGTAGAAAATACTT+TGG | + | chr2_4:21045833-21045852 | None:intergenic | 25.0% |
| ! | CAACTAGCTATACTTAATTA+AGG | + | chr2_4:21045849-21045868 | None:intergenic | 25.0% |
| ! | CTTAATTAAGTATAGCTAGT+TGG | - | chr2_4:21045847-21045866 | Msa0320500:intron | 25.0% |
| ! | ATAGACATGATAGAACATTA+TGG | - | chr2_4:21046284-21046303 | Msa0320500:intron | 25.0% |
| ! | CAAAACAACAAATTTATCAC+TGG | + | chr2_4:21046381-21046400 | None:intergenic | 25.0% |
| ! | TAAGATAGAAGAAATTGTCA+AGG | - | chr2_4:21046783-21046802 | Msa0320500:CDS | 25.0% |
| !! | AAATTAAGTAGCCTTTTGTT+TGG | - | chr2_4:21046855-21046874 | Msa0320500:five_prime_UTR | 25.0% |
| !!! | AATTAAGTAGCCTTTTGTTT+GGG | - | chr2_4:21046856-21046875 | Msa0320500:five_prime_UTR | 25.0% |
| !! | GAAGTAATTCAGTTTTTCTT+AGG | + | chr2_4:21046906-21046925 | None:intergenic | 25.0% |
| AACGATACATACGATTCATT+AGG | + | chr2_4:21043120-21043139 | None:intergenic | 30.0% | |
| !!! | CTGTTTATTTTAACGTTGGT+TGG | - | chr2_4:21043189-21043208 | Msa0320500:three_prime_UTR | 30.0% |
| ATGGAAAAAAAGAAGGTAAG+CGG | + | chr2_4:21043452-21043471 | None:intergenic | 30.0% | |
| ! | GTAATATTCTCCTTCTGAAA+TGG | + | chr2_4:21043471-21043490 | None:intergenic | 30.0% |
| TCCAATTTCCTCAAAAATTG+CGG | - | chr2_4:21043491-21043510 | Msa0320500:intron | 30.0% | |
| ! | GTATAATACCGCAATTTTTG+AGG | + | chr2_4:21043502-21043521 | None:intergenic | 30.0% |
| TGGATCTGTTAATGATTACT+AGG | - | chr2_4:21043751-21043770 | Msa0320500:intron | 30.0% | |
| AATGATTACTAGGATTTGCA+AGG | - | chr2_4:21043761-21043780 | Msa0320500:intron | 30.0% | |
| !! | CTTTTAGTTGCATTTGAGTT+AGG | - | chr2_4:21043954-21043973 | Msa0320500:intron | 30.0% |
| ! | ATTTAGGGTATGTTTGAGAA+TGG | - | chr2_4:21044034-21044053 | Msa0320500:intron | 30.0% |
| ! | ATGTTTCGATTGATGGTATA+AGG | + | chr2_4:21044096-21044115 | None:intergenic | 30.0% |
| ATATGGTATGTTTCGATTGA+TGG | + | chr2_4:21044103-21044122 | None:intergenic | 30.0% | |
| !! | TTATACCATGTTTGTTTCTG+CGG | - | chr2_4:21044281-21044300 | Msa0320500:intron | 30.0% |
| !! | TTGGAGCTTTGTTAAAATCA+CGG | - | chr2_4:21044351-21044370 | Msa0320500:intron | 30.0% |
| AAATCACGGCAAATGATAAT+TGG | - | chr2_4:21044365-21044384 | Msa0320500:intron | 30.0% | |
| AATCACGGCAAATGATAATT+GGG | - | chr2_4:21044366-21044385 | Msa0320500:intron | 30.0% | |
| AGAACATTGATCATACAAAG+TGG | + | chr2_4:21044428-21044447 | None:intergenic | 30.0% | |
| ATGCACTTACTTATTTATGC+TGG | - | chr2_4:21044485-21044504 | Msa0320500:intron | 30.0% | |
| GTATCAAAAGGAAAGTTTCT+AGG | - | chr2_4:21044658-21044677 | Msa0320500:intron | 30.0% | |
| ! | CAACTTGTAGATTTGAGTTA+TGG | + | chr2_4:21044919-21044938 | None:intergenic | 30.0% |
| CATAACTCAAATCTACAAGT+TGG | - | chr2_4:21044917-21044936 | Msa0320500:intron | 30.0% | |
| ATGTTTGTAGCCAAATTTCA+TGG | - | chr2_4:21044957-21044976 | Msa0320500:intron | 30.0% | |
| CCAAATTTCATGGTCTAATA+GGG | - | chr2_4:21044967-21044986 | Msa0320500:intron | 30.0% | |
| ATAACCTTTATAGCAAACGT+GGG | + | chr2_4:21045170-21045189 | None:intergenic | 30.0% | |
| AATAACCTTTATAGCAAACG+TGG | + | chr2_4:21045171-21045190 | None:intergenic | 30.0% | |
| TATAAAGGTTATTCAAGGGA+TGG | - | chr2_4:21045178-21045197 | Msa0320500:intron | 30.0% | |
| ! | ACATATCCATAAGTGGTTTT+CGG | + | chr2_4:21045430-21045449 | None:intergenic | 30.0% |
| ! | AATATAAAAGAAGGCACGAT+TGG | + | chr2_4:21045507-21045526 | None:intergenic | 30.0% |
| ! | TTTTAGCAGAGTGAAATGTA+GGG | - | chr2_4:21045579-21045598 | Msa0320500:intron | 30.0% |
| TGTAAAACAGTATCGCATAT+AGG | - | chr2_4:21045609-21045628 | Msa0320500:intron | 30.0% | |
| GTAAAACAGTATCGCATATA+GGG | - | chr2_4:21045610-21045629 | Msa0320500:intron | 30.0% | |
| AAAATGGTTGTCATGTTTGA+GGG | + | chr2_4:21045660-21045679 | None:intergenic | 30.0% | |
| ! | CATGACAACCATTTTCATTT+TGG | - | chr2_4:21045665-21045684 | Msa0320500:intron | 30.0% |
| TACAAGGACCAAAATGAAAA+TGG | + | chr2_4:21045676-21045695 | None:intergenic | 30.0% | |
| TCCTTGTATTTCATAGTAAC+TGG | - | chr2_4:21045688-21045707 | Msa0320500:intron | 30.0% | |
| TCCAGTTACTATGAAATACA+AGG | + | chr2_4:21045692-21045711 | None:intergenic | 30.0% | |
| TGTATTTCATAGTAACTGGA+TGG | - | chr2_4:21045692-21045711 | Msa0320500:intron | 30.0% | |
| TTATGTTGACCATATATGTC+TGG | - | chr2_4:21045728-21045747 | Msa0320500:intron | 30.0% | |
| TATGTTGACCATATATGTCT+GGG | - | chr2_4:21045729-21045748 | Msa0320500:intron | 30.0% | |
| AGCAGAAATTTCACTAACAA+AGG | + | chr2_4:21045977-21045996 | None:intergenic | 30.0% | |
| TTGTTAGTGAAATTTCTGCT+TGG | - | chr2_4:21045977-21045996 | Msa0320500:intron | 30.0% | |
| !!! | CTTGTGTCTTGTTTGTTTTT+TGG | - | chr2_4:21046086-21046105 | Msa0320500:intron | 30.0% |
| ! | CTAAACTCTTCTTTTACAAC+TGG | - | chr2_4:21046121-21046140 | Msa0320500:intron | 30.0% |
| AGATCTAGTGATTAATGAGT+TGG | - | chr2_4:21046259-21046278 | Msa0320500:intron | 30.0% | |
| ATTAGGAATTTCAAGATCTG+AGG | - | chr2_4:21046571-21046590 | Msa0320500:intron | 30.0% | |
| ! | ATGCTAGCTTAAGAAACATT+AGG | - | chr2_4:21046625-21046644 | Msa0320500:intron | 30.0% |
| ! | TGCTAGCTTAAGAAACATTA+GGG | - | chr2_4:21046626-21046645 | Msa0320500:intron | 30.0% |
| !! | TTAGGGTAAGTATCGAAAAT+TGG | - | chr2_4:21046643-21046662 | Msa0320500:CDS | 30.0% |
| !! | TAGGGTAAGTATCGAAAATT+GGG | - | chr2_4:21046644-21046663 | Msa0320500:CDS | 30.0% |
| !! | ATTAAGTAGCCTTTTGTTTG+GGG | - | chr2_4:21046857-21046876 | Msa0320500:five_prime_UTR | 30.0% |
| TCATGTGTGTTTGTATTAGT+AGG | - | chr2_4:21046924-21046943 | Msa0320500:five_prime_UTR | 30.0% | |
| TATTGAACACAAAGAGTAAC+AGG | + | chr2_4:21047028-21047047 | None:intergenic | 30.0% | |
| ATACATACGATTCATTAGGC+GGG | + | chr2_4:21043116-21043135 | None:intergenic | 35.0% | |
| GATACATACGATTCATTAGG+CGG | + | chr2_4:21043117-21043136 | None:intergenic | 35.0% | |
| ! | GATAAGTATTGTTGCCTTGT+TGG | + | chr2_4:21043253-21043272 | None:intergenic | 35.0% |
| !! | ACCGCAATTTTTGAGGAAAT+TGG | + | chr2_4:21043495-21043514 | None:intergenic | 35.0% |
| CTCAGGAACTTAATGAATCA+AGG | - | chr2_4:21043605-21043624 | Msa0320500:intron | 35.0% | |
| TTGAATTCTACCAAGAAGCT+CGG | + | chr2_4:21043632-21043651 | None:intergenic | 35.0% | |
| ATTACTAGGATTTGCAAGGT+TGG | - | chr2_4:21043765-21043784 | Msa0320500:intron | 35.0% | |
| AAAGTTGGATACACAAGTCA+AGG | - | chr2_4:21043793-21043812 | Msa0320500:intron | 35.0% | |
| ! | TAGTTGCATTTGAGTTAGGA+AGG | - | chr2_4:21043958-21043977 | Msa0320500:intron | 35.0% |
| ! | TTTCGATTGATGGTATAAGG+TGG | + | chr2_4:21044093-21044112 | None:intergenic | 35.0% |
| ACCCTATGAAACAACAATGA+AGG | - | chr2_4:21044129-21044148 | Msa0320500:intron | 35.0% | |
| !! | CCCTTCATTGTTGTTTCATA+GGG | + | chr2_4:21044133-21044152 | None:intergenic | 35.0% |
| CCCTATGAAACAACAATGAA+GGG | - | chr2_4:21044130-21044149 | Msa0320500:intron | 35.0% | |
| TAATAATAACTCCCAAGTGG+AGG | - | chr2_4:21044197-21044216 | Msa0320500:intron | 35.0% | |
| TCTCACCAACAGTTACTATT+TGG | - | chr2_4:21044332-21044351 | Msa0320500:intron | 35.0% | |
| AAGCTCCAAATAGTAACTGT+TGG | + | chr2_4:21044340-21044359 | None:intergenic | 35.0% | |
| TACAAAGTGGCTGTTTGATT+TGG | + | chr2_4:21044415-21044434 | None:intergenic | 35.0% | |
| CACATCACTCTCCTAATATT+TGG | + | chr2_4:21044461-21044480 | None:intergenic | 35.0% | |
| ! | TGGCATCAAGTTGTACAATT+TGG | - | chr2_4:21044557-21044576 | Msa0320500:intron | 35.0% |
| AAAGCATAGAAGATGTGATG+TGG | + | chr2_4:21044596-21044615 | None:intergenic | 35.0% | |
| CATAACAACAATGACAGTGA+AGG | + | chr2_4:21044698-21044717 | None:intergenic | 35.0% | |
| ! | GACAGTTTTTCCAAACAGAA+AGG | - | chr2_4:21044762-21044781 | Msa0320500:intron | 35.0% |
| ATCACTTTGGATTTCAGCTA+AGG | + | chr2_4:21044873-21044892 | None:intergenic | 35.0% | |
| TTAGCTGAAATCCAAAGTGA+TGG | - | chr2_4:21044872-21044891 | Msa0320500:intron | 35.0% | |
| ! | AAATCCAAAGTGATGGTGTT+TGG | - | chr2_4:21044879-21044898 | Msa0320500:intron | 35.0% |
| GCCAAATTTCATGGTCTAAT+AGG | - | chr2_4:21044966-21044985 | Msa0320500:intron | 35.0% | |
| CCCTATTAGACCATGAAATT+TGG | + | chr2_4:21044970-21044989 | None:intergenic | 35.0% | |
| CTATAATCCAGACAACCAAA+AGG | + | chr2_4:21045090-21045109 | None:intergenic | 35.0% | |
| ! | TTTACAATCAAAGAGGGCAT+TGG | - | chr2_4:21045337-21045356 | Msa0320500:intron | 35.0% |
| !! | TTACAATCAAAGAGGGCATT+GGG | - | chr2_4:21045338-21045357 | Msa0320500:intron | 35.0% |
| AATAAGCCGAAAACCACTTA+TGG | - | chr2_4:21045421-21045440 | Msa0320500:intron | 35.0% | |
| TCTAACAAATAGTGCGACAA+GGG | + | chr2_4:21045558-21045577 | None:intergenic | 35.0% | |
| !! | GTTTTAGCAGAGTGAAATGT+AGG | - | chr2_4:21045578-21045597 | Msa0320500:intron | 35.0% |
| AAATGGTTGTCATGTTTGAG+GGG | + | chr2_4:21045659-21045678 | None:intergenic | 35.0% | |
| GAAAATGGTTGTCATGTTTG+AGG | + | chr2_4:21045661-21045680 | None:intergenic | 35.0% | |
| !! | GTAACTGGATGGCTATTTTA+TGG | - | chr2_4:21045703-21045722 | Msa0320500:intron | 35.0% |
| !! | AATTTCTGCTTGGTGTTGAT+AGG | - | chr2_4:21045987-21046006 | Msa0320500:intron | 35.0% |
| !! | ATTTCTGCTTGGTGTTGATA+GGG | - | chr2_4:21045988-21046007 | Msa0320500:intron | 35.0% |
| AACAAACAAGACACAAGAAG+AGG | + | chr2_4:21046083-21046102 | None:intergenic | 35.0% | |
| CGACATTAAGTGTTTGCTTA+AGG | + | chr2_4:21046448-21046467 | None:intergenic | 35.0% | |
| !! | TTGGTGTTTTCCTCTTCCAT+TGG | - | chr2_4:21043208-21043227 | Msa0320500:three_prime_UTR | 40.0% |
| GATGAAATGACCAATGGAAG+AGG | + | chr2_4:21043221-21043240 | None:intergenic | 40.0% | |
| !! | GTGATGGATGAAATGACCAA+TGG | + | chr2_4:21043227-21043246 | None:intergenic | 40.0% |
| ! | AGTATTGTTGCCTTGTTGGT+CGG | + | chr2_4:21043249-21043268 | None:intergenic | 40.0% |
| ATCCTAGGGTTCGAGAATTA+GGG | + | chr2_4:21043299-21043318 | None:intergenic | 40.0% | |
| TGGAATCAGGTGAAGACATT+GGG | + | chr2_4:21043328-21043347 | None:intergenic | 40.0% | |
| TAAAAGAAGAGGACTCACAG+TGG | + | chr2_4:21043375-21043394 | None:intergenic | 40.0% | |
| ! | TTGCATTTGAGTTAGGAAGG+TGG | - | chr2_4:21043961-21043980 | Msa0320500:intron | 40.0% |
| ! | ATTTGAGTTAGGAAGGTGGA+GGG | - | chr2_4:21043965-21043984 | Msa0320500:intron | 40.0% |
| CTAAATTTCCGAGACTAGAG+GGG | + | chr2_4:21044020-21044039 | None:intergenic | 40.0% | |
| CCTAAATTTCCGAGACTAGA+GGG | + | chr2_4:21044021-21044040 | None:intergenic | 40.0% | |
| CCTCTAGTCTCGGAAATTTA+GGG | - | chr2_4:21044019-21044038 | Msa0320500:intron | 40.0% | |
| TGGTATAAGGTGGAATGAAG+CGG | + | chr2_4:21044083-21044102 | None:intergenic | 40.0% | |
| !! | GCCCTTCATTGTTGTTTCAT+AGG | + | chr2_4:21044134-21044153 | None:intergenic | 40.0% |
| ! | ACAACAATGAAGGGCTTTGT+AGG | - | chr2_4:21044139-21044158 | Msa0320500:intron | 40.0% |
| TGATAATCTCTCCTCCACTT+GGG | + | chr2_4:21044211-21044230 | None:intergenic | 40.0% | |
| ! | CCCTAAGACTTTGTTTGAGA+GGG | + | chr2_4:21044238-21044257 | None:intergenic | 40.0% |
| CCCTCTCAAACAAAGTCTTA+GGG | - | chr2_4:21044235-21044254 | Msa0320500:intron | 40.0% | |
| ! | ACCCTAAGACTTTGTTTGAG+AGG | + | chr2_4:21044239-21044258 | None:intergenic | 40.0% |
| CTTGGAGAGTTAACTCCATA+AGG | - | chr2_4:21044620-21044639 | Msa0320500:intron | 40.0% | |
| ATGTTAACGGCTCCTAGAAT+TGG | - | chr2_4:21044825-21044844 | Msa0320500:intron | 40.0% | |
| TGTTAACGGCTCCTAGAATT+GGG | - | chr2_4:21044826-21044845 | Msa0320500:intron | 40.0% | |
| TTAAGCATCCACCCAATTCT+AGG | + | chr2_4:21044840-21044859 | None:intergenic | 40.0% | |
| !! | TGTGTTCTTTGCTAGTCTTC+TGG | - | chr2_4:21045058-21045077 | Msa0320500:intron | 40.0% |
| !! | GTCTTCTGGAAATCTCCTTT+TGG | - | chr2_4:21045072-21045091 | Msa0320500:intron | 40.0% |
| !! | GAAATCTCCTTTTGGTTGTC+TGG | - | chr2_4:21045080-21045099 | Msa0320500:intron | 40.0% |
| !! | TACAATCAAAGAGGGCATTG+GGG | - | chr2_4:21045339-21045358 | Msa0320500:intron | 40.0% |
| CTCTAACAAATAGTGCGACA+AGG | + | chr2_4:21045559-21045578 | None:intergenic | 40.0% | |
| AATGGCAACCCAGACATATA+TGG | + | chr2_4:21045740-21045759 | None:intergenic | 40.0% | |
| AGTCATAGTCATAGCTCAGA+AGG | - | chr2_4:21046040-21046059 | Msa0320500:intron | 40.0% | |
| ! | CAAGTCTTATCCCACTAAGT+AGG | + | chr2_4:21046334-21046353 | None:intergenic | 40.0% |
| CTACTTAGTGGGATAAGACT+TGG | - | chr2_4:21046332-21046351 | Msa0320500:CDS | 40.0% | |
| TCAAAATGCATTGCAGCTTG+AGG | - | chr2_4:21046720-21046739 | Msa0320500:intron | 40.0% | |
| TAGCAAACACCCCAAACAAA+AGG | + | chr2_4:21046869-21046888 | None:intergenic | 40.0% | |
| TTATCTCCTCCTACCCACTA+AGG | + | chr2_4:21043084-21043103 | None:intergenic | 45.0% | |
| AGGGTTCGAGAATTAGGGTT+TGG | + | chr2_4:21043294-21043313 | None:intergenic | 45.0% | |
| AACCCTAATTCTCGAACCCT+AGG | - | chr2_4:21043294-21043313 | Msa0320500:CDS | 45.0% | |
| GATCCTAGGGTTCGAGAATT+AGG | + | chr2_4:21043300-21043319 | None:intergenic | 45.0% | |
| ACATTGGGGATCTGATCCTA+GGG | + | chr2_4:21043313-21043332 | None:intergenic | 45.0% | |
| GGAATCAGGTGAAGACATTG+GGG | + | chr2_4:21043327-21043346 | None:intergenic | 45.0% | |
| GTGGAATCAGGTGAAGACAT+TGG | + | chr2_4:21043329-21043348 | None:intergenic | 45.0% | |
| ACTAGGATTTGCAAGGTTGG+AGG | - | chr2_4:21043768-21043787 | Msa0320500:intron | 45.0% | |
| ! | CATTTGAGTTAGGAAGGTGG+AGG | - | chr2_4:21043964-21043983 | Msa0320500:intron | 45.0% |
| ! | TTTGAGTTAGGAAGGTGGAG+GGG | - | chr2_4:21043966-21043985 | Msa0320500:intron | 45.0% |
| AGAGAAAACCCCTCTAGTCT+CGG | - | chr2_4:21044009-21044028 | Msa0320500:intron | 45.0% | |
| CCCTCTAGTCTCGGAAATTT+AGG | - | chr2_4:21044018-21044037 | Msa0320500:intron | 45.0% | |
| CCCTAAATTTCCGAGACTAG+AGG | + | chr2_4:21044022-21044041 | None:intergenic | 45.0% | |
| CTGATAATCTCTCCTCCACT+TGG | + | chr2_4:21044212-21044231 | None:intergenic | 45.0% | |
| GCCCTCTCAAACAAAGTCTT+AGG | - | chr2_4:21044234-21044253 | Msa0320500:intron | 45.0% | |
| !! | TTTGATTTGGCAGTGGGAGA+AGG | + | chr2_4:21044402-21044421 | None:intergenic | 45.0% |
| !! | TGGCTGTTTGATTTGGCAGT+GGG | + | chr2_4:21044408-21044427 | None:intergenic | 45.0% |
| AGTCAGCATAGCGTTACAGA+TGG | + | chr2_4:21044530-21044549 | None:intergenic | 45.0% | |
| ! | TCTGTAACGCTATGCTGACT+TGG | - | chr2_4:21044530-21044549 | Msa0320500:intron | 45.0% |
| !! | CTGTAACGCTATGCTGACTT+GGG | - | chr2_4:21044531-21044550 | Msa0320500:intron | 45.0% |
| CAAGCCAAACACCATCACTT+TGG | + | chr2_4:21044886-21044905 | None:intergenic | 45.0% | |
| GGGCAACAGCAAACTAAAGA+GGG | + | chr2_4:21045150-21045169 | None:intergenic | 45.0% | |
| TGGGCAACAGCAAACTAAAG+AGG | + | chr2_4:21045151-21045170 | None:intergenic | 45.0% | |
| !! | GTTGCCCACGTTTGCTATAA+AGG | - | chr2_4:21045163-21045182 | Msa0320500:intron | 45.0% |
| !! | CTTTCTTTCAGGGGAGCATT+TGG | - | chr2_4:21045262-21045281 | Msa0320500:intron | 45.0% |
| AGCAGAGTGAAATGTAGGGA+CGG | - | chr2_4:21045583-21045602 | Msa0320500:intron | 45.0% | |
| ACTAAGTAGGATCAGCTACG+TGG | + | chr2_4:21046321-21046340 | None:intergenic | 45.0% | |
| ACGTAGCTGATCCTACTTAG+TGG | - | chr2_4:21046320-21046339 | Msa0320500:CDS | 45.0% | |
| CGTAGCTGATCCTACTTAGT+GGG | - | chr2_4:21046321-21046340 | Msa0320500:CDS | 45.0% | |
| GTGTTTGATTCTGTTCTCGC+AGG | - | chr2_4:21046412-21046431 | Msa0320500:intron | 45.0% | |
| AGAGCAGCCAGTATTACCAA+AGG | - | chr2_4:21046807-21046826 | Msa0320500:exon | 45.0% | |
| ! | TCCTCCTCCTTTGGTAATAC+TGG | + | chr2_4:21046817-21046836 | None:intergenic | 45.0% |
| ! | TTGGCATTTTCCTCCTCCTT+TGG | + | chr2_4:21046826-21046845 | None:intergenic | 45.0% |
| !! | AATTAATTAATAATAAAATG+AGG | + | chr2_4:21043524-21043543 | None:intergenic | 5.0% |
| !! | TTTAAAAAAAAAAATGTTAA+CGG | - | chr2_4:21044812-21044831 | Msa0320500:intron | 5.0% |
| TCATCCATCACCGACCAACA+AGG | - | chr2_4:21043236-21043255 | Msa0320500:three_prime_UTR | 50.0% | |
| GACATTGGGGATCTGATCCT+AGG | + | chr2_4:21043314-21043333 | None:intergenic | 50.0% | |
| AGAGAAGGAGCTGTGGAATC+AGG | + | chr2_4:21043341-21043360 | None:intergenic | 50.0% | |
| GACTCACAGTGGATGAGAGA+GGG | + | chr2_4:21043364-21043383 | None:intergenic | 50.0% | |
| GAATCAAGGTCCGAGCTTCT+TGG | - | chr2_4:21043619-21043638 | Msa0320500:intron | 50.0% | |
| GCAAGGTTGGAGGTCAAAGT+TGG | - | chr2_4:21043778-21043797 | Msa0320500:intron | 50.0% | |
| AAGGTGGAGGGGAATGCATT+TGG | - | chr2_4:21043977-21043996 | Msa0320500:intron | 50.0% | |
| AGGTGGAGGGGAATGCATTT+GGG | - | chr2_4:21043978-21043997 | Msa0320500:intron | 50.0% | |
| AGGGGAATGCATTTGGGGAA+AGG | - | chr2_4:21043984-21044003 | Msa0320500:intron | 50.0% | |
| GGGGAATGCATTTGGGGAAA+GGG | - | chr2_4:21043985-21044004 | Msa0320500:intron | 50.0% | |
| GGGAATGCATTTGGGGAAAG+GGG | - | chr2_4:21043986-21044005 | Msa0320500:intron | 50.0% | |
| ! | GTAACTGTTGGTGAGACGTG+TGG | + | chr2_4:21044328-21044347 | None:intergenic | 50.0% |
| !! | GTGGCTGTTTGATTTGGCAG+TGG | + | chr2_4:21044409-21044428 | None:intergenic | 50.0% |
| TAACGGCTCCTAGAATTGGG+TGG | - | chr2_4:21044829-21044848 | Msa0320500:intron | 50.0% | |
| CTCTTGTTGCTGCTGAAGAG+TGG | + | chr2_4:21046598-21046617 | None:intergenic | 50.0% | |
| CACTCTTCAGCAGCAACAAG+AGG | - | chr2_4:21046596-21046615 | Msa0320500:intron | 50.0% | |
| GCAGCCAGTATTACCAAAGG+AGG | - | chr2_4:21046810-21046829 | Msa0320500:exon | 50.0% | |
| GCCAGTATTACCAAAGGAGG+AGG | - | chr2_4:21046813-21046832 | Msa0320500:exon | 50.0% | |
| ! | GTTGCCTTGTTGGTCGGTGA+TGG | + | chr2_4:21043243-21043262 | None:intergenic | 55.0% |
| GTGGATGAGAGAGGGAGAGA+AGG | + | chr2_4:21043356-21043375 | None:intergenic | 55.0% | |
| GGACTCACAGTGGATGAGAG+AGG | + | chr2_4:21043365-21043384 | None:intergenic | 55.0% | |
| GGTGGAGGGGAATGCATTTG+GGG | - | chr2_4:21043979-21043998 | Msa0320500:intron | 55.0% | |
| CGCAGCCGCAGAAACAAACA+TGG | + | chr2_4:21044289-21044308 | None:intergenic | 55.0% | |
| !! | CGCTATGCTGACTTGGGAGT+TGG | - | chr2_4:21044537-21044556 | Msa0320500:intron | 55.0% |
| GAGAGGGAGAGAAGGAGCTG+TGG | + | chr2_4:21043348-21043367 | None:intergenic | 60.0% | |
| !! | GTTTGTTTCTGCGGCTGCGC+TGG | - | chr2_4:21044290-21044309 | Msa0320500:intron | 60.0% |
| TCTGCGGCTGCGCTGGAATA+CGG | - | chr2_4:21044297-21044316 | Msa0320500:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 21043081 | 21047061 | 21043081 | ID=Msa0320500;Name=Msa0320500 |
| chr2_4 | mRNA | 21043081 | 21047061 | 21043081 | ID=Msa0320500-mRNA-1;Parent=Msa0320500;Name=Msa0320500-mRNA-1;_AED=0.11;_eAED=0.11;_QI=248|1|1|1|1|1|7|200|147 |
| chr2_4 | exon | 21043081 | 21043406 | 21043081 | ID=Msa0320500-mRNA-1:exon:7729;Parent=Msa0320500-mRNA-1 |
| chr2_4 | exon | 21043495 | 21043566 | 21043495 | ID=Msa0320500-mRNA-1:exon:7728;Parent=Msa0320500-mRNA-1 |
| chr2_4 | exon | 21043655 | 21043708 | 21043655 | ID=Msa0320500-mRNA-1:exon:7727;Parent=Msa0320500-mRNA-1 |
| chr2_4 | exon | 21046316 | 21046369 | 21046316 | ID=Msa0320500-mRNA-1:exon:7726;Parent=Msa0320500-mRNA-1 |
| chr2_4 | exon | 21046479 | 21046532 | 21046479 | ID=Msa0320500-mRNA-1:exon:7725;Parent=Msa0320500-mRNA-1 |
| chr2_4 | exon | 21046630 | 21046665 | 21046630 | ID=Msa0320500-mRNA-1:exon:7724;Parent=Msa0320500-mRNA-1 |
| chr2_4 | exon | 21046766 | 21047061 | 21046766 | ID=Msa0320500-mRNA-1:exon:7723;Parent=Msa0320500-mRNA-1 |
| chr2_4 | five_prime_UTR | 21046814 | 21047061 | 21046814 | ID=Msa0320500-mRNA-1:five_prime_utr;Parent=Msa0320500-mRNA-1 |
| chr2_4 | CDS | 21046766 | 21046813 | 21046766 | ID=Msa0320500-mRNA-1:cds;Parent=Msa0320500-mRNA-1 |
| chr2_4 | CDS | 21046630 | 21046665 | 21046630 | ID=Msa0320500-mRNA-1:cds;Parent=Msa0320500-mRNA-1 |
| chr2_4 | CDS | 21046479 | 21046532 | 21046479 | ID=Msa0320500-mRNA-1:cds;Parent=Msa0320500-mRNA-1 |
| chr2_4 | CDS | 21046316 | 21046369 | 21046316 | ID=Msa0320500-mRNA-1:cds;Parent=Msa0320500-mRNA-1 |
| chr2_4 | CDS | 21043655 | 21043708 | 21043655 | ID=Msa0320500-mRNA-1:cds;Parent=Msa0320500-mRNA-1 |
| chr2_4 | CDS | 21043495 | 21043566 | 21043495 | ID=Msa0320500-mRNA-1:cds;Parent=Msa0320500-mRNA-1 |
| chr2_4 | CDS | 21043281 | 21043406 | 21043281 | ID=Msa0320500-mRNA-1:cds;Parent=Msa0320500-mRNA-1 |
| chr2_4 | three_prime_UTR | 21043081 | 21043280 | 21043081 | ID=Msa0320500-mRNA-1:three_prime_utr;Parent=Msa0320500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
