AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0819670


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0819670 MtrunA17_Chr5g0439011 94.545 330 6 1 1 330 1 318 0.0 642
Msa0819670 MtrunA17_Chr3g0121141 82.675 329 41 2 2 330 1 313 0.0 563
Msa0819670 MtrunA17_Chr2g0289341 71.299 331 79 3 2 330 1 317 6.26e-179 497
Msa0819670 MtrunA17_Chr3g0125201 47.368 323 146 4 3 318 1 306 2.47e-102 303
Msa0819670 MtrunA17_Chr6g0488511 45.625 320 147 6 3 318 1 297 7.12e-95 283
Msa0819670 MtrunA17_Chr4g0075471 73.510 151 27 2 155 305 24 161 4.35e-75 228
Msa0819670 MtrunA17_Chr4g0075431 64.634 164 57 1 2 165 1 163 4.51e-69 213
Msa0819670 MtrunA17_Chr5g0437181 36.615 325 179 7 4 318 48 355 2.13e-65 210
Msa0819670 MtrunA17_Chr3g0113641 35.562 329 183 8 3 320 48 358 2.02e-62 202
Msa0819670 MtrunA17_Chr4g0006371 34.154 325 188 6 3 317 60 368 2.79e-61 200
Msa0819670 MtrunA17_Chr7g0242551 34.769 325 186 7 3 317 52 360 4.93e-60 196
Msa0819670 MtrunA17_Chr3g0109041 33.968 315 172 10 5 300 42 339 1.19e-52 177
Msa0819670 MtrunA17_Chr8g0345831 35.855 304 165 10 4 298 41 323 3.69e-52 175
Msa0819670 MtrunA17_Chr8g0375571 33.562 292 157 7 6 281 46 316 2.35e-51 173
Msa0819670 MtrunA17_Chr8g0375671 33.447 293 160 8 2 279 49 321 1.10e-50 172
Msa0819670 MtrunA17_Chr8g0375601 31.447 318 185 9 5 310 48 344 6.01e-50 170
Msa0819670 MtrunA17_Chr5g0423191 30.380 316 194 6 2 310 44 340 8.36e-48 164
Msa0819670 MtrunA17_Chr3g0128001 32.566 304 173 8 4 298 37 317 6.31e-47 161
Msa0819670 MtrunA17_Chr5g0420981 29.299 314 193 7 6 310 54 347 2.95e-46 160
Msa0819670 MtrunA17_Chr8g0371921 35.231 281 155 9 5 274 39 303 2.98e-46 160
Msa0819670 MtrunA17_Chr5g0420951 29.841 315 190 7 6 310 54 347 4.05e-46 160
Msa0819670 MtrunA17_Chr5g0421011 30.128 312 192 6 6 310 48 340 7.47e-46 159
Msa0819670 MtrunA17_Chr7g0220001 32.500 320 181 9 5 316 41 333 7.50e-46 159
Msa0819670 MtrunA17_Chr8g0371931 35.231 281 155 8 5 274 39 303 8.30e-46 159
Msa0819670 MtrunA17_Chr5g0421041 30.159 315 194 6 3 310 43 338 8.37e-46 159
Msa0819670 MtrunA17_Chr1g0184101 32.468 308 178 6 4 302 37 323 8.62e-46 159
Msa0819670 MtrunA17_Chr8g0365241 29.206 315 192 7 6 310 58 351 2.35e-45 158
Msa0819670 MtrunA17_Chr5g0423201 30.990 313 189 6 6 310 48 341 3.89e-45 157
Msa0819670 MtrunA17_Chr5g0412681 33.221 298 166 7 4 290 32 307 5.56e-45 156
Msa0819670 MtrunA17_Chr7g0239111 31.023 303 183 6 5 300 55 338 1.04e-44 156
Msa0819670 MtrunA17_Chr5g0423251 29.747 316 196 6 2 310 44 340 1.10e-44 156
Msa0819670 MtrunA17_Chr5g0420941 30.255 314 191 7 5 310 45 338 2.90e-44 155
Msa0819670 MtrunA17_Chr5g0405411 34.164 281 158 8 5 274 39 303 8.29e-44 154
Msa0819670 MtrunA17_Chr5g0426891 31.475 305 183 9 5 301 39 325 1.62e-43 152
Msa0819670 MtrunA17_Chr5g0421091 30.063 316 190 8 5 310 45 339 9.27e-43 151
Msa0819670 MtrunA17_Chr1g0162191 31.690 284 169 7 5 279 47 314 3.97e-42 149
Msa0819670 MtrunA17_Chr2g0311761 32.740 281 159 6 18 287 83 344 4.08e-42 149
Msa0819670 MtrunA17_Chr1g0184161 31.488 289 165 6 6 282 39 306 4.20e-42 149
Msa0819670 MtrunA17_Chr2g0296371 31.034 319 189 8 4 310 49 348 5.34e-42 149
Msa0819670 MtrunA17_Chr2g0311701 31.132 318 171 11 3 299 67 357 5.82e-42 149
Msa0819670 MtrunA17_Chr2g0314401 29.968 317 196 7 2 310 48 346 6.28e-42 149
Msa0819670 MtrunA17_Chr2g0314381 29.747 316 196 7 3 310 75 372 6.45e-42 149
Msa0819670 MtrunA17_Chr6g0455481 31.928 332 178 9 4 320 41 339 8.03e-42 148
Msa0819670 MtrunA17_Chr5g0423221 27.885 312 200 6 6 310 72 365 1.09e-41 149
Msa0819670 MtrunA17_Chr2g0311681 30.606 330 177 12 3 309 61 361 2.07e-41 147
Msa0819670 MtrunA17_Chr2g0311831 32.051 312 176 9 6 304 69 357 2.83e-41 147
Msa0819670 MtrunA17_Chr2g0311921 31.169 308 181 7 6 302 55 342 5.02e-41 146
Msa0819670 MtrunA17_Chr1g0187831 32.484 314 175 12 3 302 68 358 5.93e-41 147
Msa0819670 MtrunA17_Chr8g0336751 35.156 256 138 7 18 265 109 344 6.22e-41 147
Msa0819670 MtrunA17_Chr2g0311741 32.915 319 168 12 3 304 25 314 7.96e-41 145
Msa0819670 MtrunA17_Chr5g0412671 32.558 301 172 8 4 290 37 320 8.26e-41 145
Msa0819670 MtrunA17_Chr1g0187811 32.907 313 170 13 6 302 189 477 9.19e-41 149
Msa0819670 MtrunA17_Chr8g0348081 31.529 314 178 10 5 304 60 350 1.19e-40 145
Msa0819670 MtrunA17_Chr2g0311711 32.890 301 156 11 1 281 63 337 1.37e-40 145
Msa0819670 MtrunA17_Chr1g0184111 28.664 307 192 8 4 302 36 323 1.83e-40 144
Msa0819670 MtrunA17_Chr7g0239121 30.293 307 181 8 5 300 51 335 1.92e-40 145
Msa0819670 MtrunA17_Chr7g0239821 30.719 306 178 7 6 300 65 347 1.96e-40 145
Msa0819670 MtrunA17_Chr1g0184121 31.119 286 171 7 6 282 38 306 2.21e-40 144
Msa0819670 MtrunA17_Chr3g0102041 32.740 281 162 8 5 274 39 303 2.74e-40 144
Msa0819670 MtrunA17_Chr5g0421101 27.244 312 201 6 6 310 48 340 3.17e-40 144
Msa0819670 MtrunA17_Chr5g0412651 30.794 315 178 9 4 299 37 330 3.81e-40 144
Msa0819670 MtrunA17_Chr5g0420901 29.299 314 194 7 5 310 46 339 5.29e-40 144
Msa0819670 MtrunA17_Chr2g0311691 30.769 325 183 12 3 309 61 361 8.19e-40 144
Msa0819670 MtrunA17_Chr7g0266651 30.818 318 188 9 4 310 58 354 8.29e-40 143
Msa0819670 MtrunA17_Chr7g0239101 29.560 318 188 8 5 310 55 348 9.31e-40 143
Msa0819670 MtrunA17_Chr3g0145171 28.571 287 181 7 3 280 50 321 1.00e-39 143
Msa0819670 MtrunA17_Chr8g0375701 29.831 295 183 5 22 310 71 347 1.01e-39 143
Msa0819670 MtrunA17_Chr2g0319491 31.683 303 166 9 6 298 34 305 1.56e-39 142
Msa0819670 MtrunA17_Chr4g0066121 33.110 299 163 10 5 287 60 337 2.43e-39 142
Msa0819670 MtrunA17_Chr4g0064781 30.515 272 165 6 2 266 47 301 5.01e-39 141
Msa0819670 MtrunA17_Chr1g0184151 32.056 287 170 5 4 282 37 306 6.16e-39 140
Msa0819670 MtrunA17_Chr5g0398291 30.945 307 183 7 6 299 48 338 6.43e-39 140
Msa0819670 MtrunA17_Chr1g0167911 34.084 311 155 11 6 294 55 337 1.70e-38 140
Msa0819670 MtrunA17_Chr2g0311861 33.448 290 155 9 18 304 79 333 2.23e-38 139
Msa0819670 MtrunA17_Chr7g0220011 28.939 311 183 11 4 302 38 322 3.27e-38 138
Msa0819670 MtrunA17_Chr4g0050031 31.562 320 184 10 5 311 62 359 8.92e-38 138
Msa0819670 MtrunA17_Chr1g0179801 31.333 300 173 8 3 287 64 345 1.15e-37 138
Msa0819670 MtrunA17_Chr2g0314391 28.391 317 201 6 2 310 67 365 2.10e-37 137
Msa0819670 MtrunA17_Chr7g0235951 30.183 328 177 13 3 310 65 360 2.50e-37 137
Msa0819670 MtrunA17_Chr8g0375681 29.181 281 174 7 37 310 15 277 2.59e-37 135
Msa0819670 MtrunA17_Chr8g0364471 30.408 319 177 10 3 302 65 357 2.92e-37 137
Msa0819670 MtrunA17_Chr4g0055591 29.063 320 179 10 4 304 57 347 3.16e-37 136
Msa0819670 MtrunA17_Chr8g0336861 30.341 323 178 10 7 310 59 353 3.34e-37 136
Msa0819670 MtrunA17_Chr8g0370711 29.430 316 194 10 6 312 53 348 3.52e-37 136
Msa0819670 MtrunA17_Chr8g0354261 32.013 303 150 12 3 279 66 338 1.04e-36 135
Msa0819670 MtrunA17_Chr8g0336851 29.630 297 175 8 5 287 60 336 1.64e-36 134
Msa0819670 MtrunA17_Chr8g0336781 30.363 303 174 10 1 287 91 372 2.22e-36 135
Msa0819670 MtrunA17_Chr8g0336631 31.561 301 163 11 6 287 61 337 2.95e-36 134
Msa0819670 MtrunA17_Chr3g0087031 29.605 304 188 9 3 299 58 342 3.78e-36 134
Msa0819670 MtrunA17_Chr7g0239071 28.664 307 190 8 12 310 8 293 3.91e-36 132
Msa0819670 MtrunA17_Chr1g0187821 31.529 314 177 11 3 302 65 354 7.28e-36 133
Msa0819670 MtrunA17_Chr5g0424201 31.699 306 180 10 3 299 42 327 7.35e-36 132
Msa0819670 MtrunA17_Chr1g0162361 29.836 305 175 9 6 290 28 313 8.29e-36 132
Msa0819670 MtrunA17_Chr8g0336761 31.229 301 164 10 7 287 59 336 8.42e-36 132
Msa0819670 MtrunA17_Chr8g0354241 32.423 293 162 12 3 279 66 338 1.12e-35 132
Msa0819670 MtrunA17_Chr3g0126741 31.058 293 171 7 1 281 55 328 2.62e-35 131
Msa0819670 MtrunA17_Chr4g0045451 28.754 313 177 8 6 290 27 321 3.48e-35 130
Msa0819670 MtrunA17_Chr4g0045441 28.197 305 183 7 6 290 33 321 4.56e-35 130
Msa0819670 MtrunA17_Chr4g0045471 29.936 314 173 11 6 290 27 322 5.37e-35 130
Msa0819670 MtrunA17_Chr7g0232161 31.102 254 147 5 2 248 62 294 7.27e-35 129
Msa0819670 MtrunA17_Chr3g0093751 32.166 314 168 12 4 302 55 338 7.94e-35 130
Msa0819670 MtrunA17_Chr5g0423211 27.358 318 197 9 5 310 47 342 8.11e-35 130
Msa0819670 MtrunA17_Chr1g0162351 27.619 315 184 8 4 290 68 366 1.14e-34 130
Msa0819670 MtrunA17_Chr7g0247991 29.968 317 175 13 3 299 65 354 3.32e-34 129
Msa0819670 MtrunA17_Chr5g0420721 31.020 245 149 4 68 310 16 242 3.46e-34 126
Msa0819670 MtrunA17_Chr8g0370721 28.622 283 178 7 6 279 53 320 4.24e-34 128
Msa0819670 MtrunA17_Chr3g0093761 31.210 314 170 13 4 302 55 337 5.11e-34 127
Msa0819670 MtrunA17_Chr1g0167951 31.864 295 171 8 4 287 52 327 6.13e-34 127
Msa0819670 MtrunA17_Chr7g0250511 31.410 312 181 10 4 304 48 337 7.44e-34 127
Msa0819670 MtrunA17_Chr1g0162321 27.215 316 184 8 4 290 68 366 9.12e-34 128
Msa0819670 MtrunA17_Chr3g0105281 29.412 289 159 8 23 298 45 301 1.01e-33 126
Msa0819670 MtrunA17_Chr7g0265221 26.910 301 191 5 3 287 65 352 1.17e-33 127
Msa0819670 MtrunA17_Chr8g0335411 30.341 323 188 13 3 310 65 365 1.71e-33 127
Msa0819670 MtrunA17_Chr3g0093741 31.546 317 166 13 4 302 55 338 1.87e-33 126
Msa0819670 MtrunA17_Chr2g0332191 28.065 310 187 9 6 303 53 338 3.15e-33 126
Msa0819670 MtrunA17_Chr2g0311631 28.615 325 191 11 4 311 54 354 3.42e-33 125
Msa0819670 MtrunA17_Chr4g0045411 30.272 294 168 9 6 278 31 308 3.81e-33 125
Msa0819670 MtrunA17_Chr4g0066991 30.225 311 172 10 3 304 65 339 4.51e-33 125
Msa0819670 MtrunA17_Chr1g0167961 31.734 271 157 8 4 265 68 319 1.31e-32 124
Msa0819670 MtrunA17_Chr3g0114861 30.449 312 184 9 3 301 38 329 1.43e-32 123
Msa0819670 MtrunA17_Chr5g0424211 30.137 292 172 10 3 281 40 312 3.52e-32 122
Msa0819670 MtrunA17_Chr7g0265351 29.618 314 170 11 4 299 38 318 4.83e-32 122
Msa0819670 MtrunA17_Chr6g0472861 30.284 317 177 14 3 302 68 357 5.36e-32 122
Msa0819670 MtrunA17_Chr1g0184241 28.707 317 183 9 2 304 66 353 1.67e-31 121
Msa0819670 MtrunA17_Chr2g0313111 28.866 291 181 7 16 298 33 305 2.12e-31 120
Msa0819670 MtrunA17_Chr1g0161041 28.438 320 163 13 6 299 97 376 2.73e-31 121
Msa0819670 MtrunA17_Chr3g0145181 25.862 290 180 7 22 293 69 341 3.11e-31 120
Msa0819670 MtrunA17_Chr7g0225881 30.483 269 157 10 6 265 68 315 7.41e-31 119
Msa0819670 MtrunA17_Chr1g0167931 31.439 264 128 7 4 265 53 265 9.70e-31 118
Msa0819670 MtrunA17_Chr3g0092531 29.010 293 182 7 21 308 26 297 1.84e-30 117
Msa0819670 MtrunA17_Chr1g0161111 29.503 322 176 11 6 311 133 419 5.11e-30 118
Msa0819670 MtrunA17_Chr4g0011311 30.932 236 139 8 2 224 64 288 6.46e-30 115
Msa0819670 MtrunA17_Chr1g0148771 28.159 277 171 7 6 275 64 319 3.19e-29 115
Msa0819670 MtrunA17_Chr3g0145201 26.022 269 171 6 22 279 704 955 4.68e-29 117
Msa0819670 MtrunA17_Chr1g0161081 27.707 314 175 11 5 299 73 353 6.75e-29 114
Msa0819670 MtrunA17_Chr2g0285931 27.215 316 177 9 13 300 25 315 1.61e-28 112
Msa0819670 MtrunA17_Chr7g0236011 29.193 322 181 12 3 304 65 359 2.85e-28 112
Msa0819670 MtrunA17_Chr7g0239091 28.481 316 201 8 4 318 159 450 7.56e-28 112
Msa0819670 MtrunA17_Chr4g0045431 28.671 286 152 8 22 279 49 310 8.10e-28 111
Msa0819670 MtrunA17_Chr8g0351101 25.077 323 201 10 20 323 72 372 1.29e-27 110
Msa0819670 MtrunA17_Chr4g0045461 29.514 288 168 8 22 290 49 320 2.81e-27 110
Msa0819670 MtrunA17_Chr7g0235981 30.924 249 133 7 36 271 55 277 8.36e-27 107
Msa0819670 MtrunA17_Chr5g0394071 31.892 185 101 4 114 298 4 163 3.42e-26 102
Msa0819670 MtrunA17_Chr1g0204181 28.076 317 178 11 3 295 57 347 3.46e-26 107
Msa0819670 MtrunA17_Chr8g0358941 27.329 322 202 9 16 321 32 337 1.27e-25 104
Msa0819670 MtrunA17_Chr3g0114871 31.416 226 144 6 8 224 42 265 1.49e-25 103
Msa0819670 MtrunA17_Chr2g0314371 27.381 252 150 5 3 224 50 298 1.99e-25 104
Msa0819670 MtrunA17_Chr3g0126761 36.471 170 94 3 112 281 44 199 2.22e-25 102
Msa0819670 MtrunA17_Chr5g0420881 34.228 149 83 2 163 311 4 137 4.73e-25 98.6
Msa0819670 MtrunA17_Chr8g0384461 24.127 315 203 12 3 301 45 339 9.81e-25 102
Msa0819670 MtrunA17_Chr3g0125421 27.703 296 171 13 25 301 59 330 1.98e-24 102
Msa0819670 MtrunA17_Chr8g0384481 24.919 309 199 10 3 297 57 346 2.79e-24 101
Msa0819670 MtrunA17_Chr6g0474391 25.625 320 182 9 3 295 62 352 2.92e-24 101
Msa0819670 MtrunA17_Chr1g0191201 25.478 314 196 14 6 301 54 347 1.04e-23 100
Msa0819670 MtrunA17_Chr4g0052251 25.085 295 176 8 25 298 43 313 1.34e-23 99.4
Msa0819670 MtrunA17_Chr8g0336801 39.062 128 62 4 163 287 14 128 9.51e-23 92.8
Msa0819670 MtrunA17_Chr8g0362741 31.373 204 115 8 33 224 83 273 1.39e-22 95.5
Msa0819670 MtrunA17_Chr4g0068891 24.765 319 196 10 5 307 20 310 2.72e-22 95.5
Msa0819670 MtrunA17_Chr5g0407781 24.768 323 198 11 1 311 1 290 5.37e-22 94.4
Msa0819670 MtrunA17_Chr4g0064771 31.472 197 116 5 113 304 27 209 7.52e-22 91.7
Msa0819670 MtrunA17_Chr3g0130391 24.922 321 199 12 6 304 67 367 1.70e-21 94.0
Msa0819670 MtrunA17_Chr8g0348951 25.466 322 192 10 1 301 1 295 1.82e-21 93.2
Msa0819670 MtrunA17_Chr7g0233661 33.333 162 83 4 137 298 1 137 2.66e-21 89.0
Msa0819670 MtrunA17_Chr1g0158011 29.740 269 153 13 42 300 1 243 3.78e-21 91.3
Msa0819670 MtrunA17_Chr8g0389941 27.950 322 180 14 22 311 48 349 1.24e-20 91.3
Msa0819670 MtrunA17_Chr7g0247741 26.712 292 169 11 28 301 31 295 2.24e-20 90.1
Msa0819670 MtrunA17_Chr6g0486831 28.280 343 188 16 5 311 18 338 2.48e-20 90.1
Msa0819670 MtrunA17_Chr1g0194321 26.061 330 194 12 3 307 18 322 3.69e-20 89.7
Msa0819670 MtrunA17_Chr4g0053251 25.455 275 167 8 20 274 33 289 4.06e-20 89.4
Msa0819670 MtrunA17_Chr2g0319521 35.652 115 70 2 110 224 14 124 4.59e-20 85.1
Msa0819670 MtrunA17_Chr4g0037611 33.918 171 87 5 129 298 8 153 1.48e-19 84.7
Msa0819670 MtrunA17_Chr1g0170631 27.570 214 133 5 112 323 3 196 1.10e-18 82.8
Msa0819670 MtrunA17_Chr8g0364171 36.522 115 65 3 112 224 18 126 3.41e-18 80.1
Msa0819670 MtrunA17_Chr4g0055871 27.526 287 169 12 3 272 7 271 3.83e-18 83.6
Msa0819670 MtrunA17_Chr1g0167921 34.247 146 82 4 88 223 15 156 1.69e-17 79.0
Msa0819670 MtrunA17_Chr8g0336871 34.337 166 84 5 125 287 3 146 1.55e-16 76.3
Msa0819670 MtrunA17_Chr3g0092581 27.273 187 118 5 122 308 1 169 1.74e-16 76.6
Msa0819670 MtrunA17_Chr1g0158021 28.155 206 134 9 17 216 64 261 1.81e-16 78.2
Msa0819670 MtrunA17_Chr8g0375581 46.774 62 33 0 159 220 24 85 2.32e-16 73.2
Msa0819670 MtrunA17_Chr1g0158031 33.129 163 87 7 122 280 1 145 2.62e-15 73.2
Msa0819670 MtrunA17_Chr4g0004071 25.796 314 191 12 5 302 9 296 7.61e-15 73.9
Msa0819670 MtrunA17_Chr2g0293931 27.500 200 123 7 115 307 10 194 8.43e-14 69.3
Msa0819670 MtrunA17_Chr2g0311611 42.029 69 32 2 163 224 4 71 1.60e-13 65.1
Msa0819670 MtrunA17_Chr7g0219991 34.545 110 68 1 113 222 249 354 3.29e-13 69.7
Msa0819670 MtrunA17_Chr8g0336831 29.412 170 102 6 24 183 82 243 5.81e-13 67.8
Msa0819670 MtrunA17_Chr3g0138351 27.136 199 124 7 111 306 125 305 1.57e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0819670 AT1G05010.1 70.571 333 80 5 2 328 1 321 1.79e-172 481
Msa0819670 AT1G12010.1 66.566 332 92 3 1 330 3 317 6.96e-168 470
Msa0819670 AT1G62380.1 65.758 330 94 3 3 330 5 317 9.32e-167 467
Msa0819670 AT2G19590.1 45.768 319 147 5 3 319 9 303 1.95e-101 301
Msa0819670 AT1G77330.1 46.933 326 142 6 3 318 1 305 2.39e-95 285
Msa0819670 AT2G19590.2 46.341 287 128 5 35 319 26 288 4.05e-90 271
Msa0819670 AT5G05600.1 34.098 305 175 6 4 298 61 349 2.61e-54 182
Msa0819670 AT3G11180.2 33.333 327 184 8 3 313 93 401 1.24e-53 181
Msa0819670 AT3G11180.1 33.435 329 188 8 3 323 93 398 1.31e-53 181
Msa0819670 AT2G38240.1 32.353 306 183 6 3 301 46 334 5.54e-53 178
Msa0819670 AT4G10490.1 34.084 311 181 8 4 307 41 334 1.23e-52 177
Msa0819670 AT5G24530.1 33.007 306 176 7 4 300 37 322 4.17e-52 175
Msa0819670 AT4G16330.2 35.959 292 153 9 23 300 80 351 1.95e-50 172
Msa0819670 AT3G55970.1 33.101 287 169 5 4 279 51 325 1.22e-48 167
Msa0819670 AT4G10500.1 32.026 306 175 8 4 298 43 326 1.60e-47 164
Msa0819670 AT1G78550.1 30.032 313 193 7 6 310 54 348 1.95e-46 161
Msa0819670 AT3G51240.1 35.587 281 154 8 5 274 38 302 3.09e-46 160
Msa0819670 AT1G17010.1 31.229 301 171 6 1 286 50 329 3.22e-43 152
Msa0819670 AT1G06620.1 32.390 318 179 9 3 307 60 354 5.33e-42 149
Msa0819670 AT1G17020.1 30.592 304 187 6 3 298 51 338 1.60e-41 148
Msa0819670 AT5G20400.1 29.450 309 194 7 3 302 43 336 5.95e-41 146
Msa0819670 AT4G25310.1 31.930 285 167 6 22 299 70 334 1.03e-40 146
Msa0819670 AT4G16330.1 38.356 219 113 6 85 300 46 245 1.23e-40 143
Msa0819670 AT4G25300.1 29.703 303 188 6 4 298 51 336 2.36e-40 145
Msa0819670 AT1G49390.1 28.571 301 192 6 3 294 43 329 5.38e-39 141
Msa0819670 AT5G08640.2 30.921 304 180 9 6 298 41 325 6.32e-39 140
Msa0819670 AT5G08640.1 30.921 304 180 9 6 298 41 325 6.32e-39 140
Msa0819670 AT4G21200.1 33.574 277 151 10 6 272 43 296 6.60e-39 140
Msa0819670 AT3G12900.1 30.492 305 173 10 8 299 59 337 7.75e-39 141
Msa0819670 AT2G30830.1 33.216 283 158 8 16 287 68 330 1.90e-38 140
Msa0819670 AT5G05600.2 33.333 231 143 4 4 224 61 290 2.62e-38 138
Msa0819670 AT3G55970.2 32.328 232 146 4 4 224 51 282 6.56e-38 137
Msa0819670 AT5G43450.1 29.721 323 191 12 1 311 57 355 2.33e-37 137
Msa0819670 AT4G22880.1 29.693 293 180 6 18 300 63 339 2.44e-37 137
Msa0819670 AT4G22880.2 29.693 293 180 6 18 300 63 339 2.44e-37 137
Msa0819670 AT4G22880.3 29.693 293 180 6 18 300 63 339 2.44e-37 137
Msa0819670 AT1G78550.2 28.873 284 177 6 34 310 5 270 2.75e-37 135
Msa0819670 AT5G59540.1 30.892 314 181 11 3 302 59 350 4.03e-37 137
Msa0819670 AT1G03410.2 32.673 303 163 13 3 287 55 334 4.09e-37 136
Msa0819670 AT1G03410.1 32.673 303 163 13 3 287 92 371 8.42e-37 136
Msa0819670 AT5G20550.1 29.310 290 181 6 2 281 42 317 1.00e-36 135
Msa0819670 AT3G19010.1 30.719 306 175 7 6 290 29 318 1.01e-36 135
Msa0819670 AT3G19010.4 30.719 306 175 7 6 290 29 318 1.01e-36 135
Msa0819670 AT5G59530.1 30.818 318 177 11 3 302 56 348 1.52e-36 135
Msa0819670 AT3G61400.1 32.595 316 176 13 3 304 65 357 1.78e-36 135
Msa0819670 AT3G21420.1 29.720 286 175 7 6 280 56 326 2.73e-36 134
Msa0819670 AT1G55290.1 28.710 310 181 11 4 300 61 343 2.88e-36 134
Msa0819670 AT5G43440.1 30.514 331 176 12 3 311 60 358 3.53e-36 134
Msa0819670 AT1G15550.1 28.065 310 192 8 4 304 56 343 4.16e-36 134
Msa0819670 AT1G04350.1 31.419 296 171 11 6 289 59 334 9.13e-36 133
Msa0819670 AT3G13610.1 28.767 292 173 9 23 302 77 345 1.19e-35 132
Msa0819670 AT5G63590.1 31.270 307 179 10 3 298 12 297 1.71e-35 131
Msa0819670 AT2G36690.2 27.744 328 201 8 3 320 59 360 8.35e-35 130
Msa0819670 AT2G36690.1 27.744 328 201 8 3 320 59 360 8.35e-35 130
Msa0819670 AT1G06650.2 28.261 322 185 12 2 304 61 355 1.02e-34 130
Msa0819670 AT3G19000.1 31.013 316 177 10 6 299 33 329 1.24e-34 130
Msa0819670 AT5G54000.2 28.826 281 177 7 3 274 44 310 1.34e-34 129
Msa0819670 AT1G80340.1 28.720 289 181 7 25 304 64 336 5.51e-34 128
Msa0819670 AT2G30840.1 31.333 300 172 11 16 304 72 348 7.21e-34 128
Msa0819670 AT5G63595.1 31.387 274 148 10 4 272 24 262 3.56e-33 124
Msa0819670 AT3G51240.2 38.342 193 99 5 86 274 42 218 4.77e-33 124
Msa0819670 AT1G04380.1 31.949 313 168 12 6 302 46 329 8.45e-33 124
Msa0819670 AT1G49390.2 28.409 264 168 5 38 294 1 250 1.14e-32 122
Msa0819670 AT1G06640.1 29.348 276 163 8 2 265 61 316 5.40e-32 123
Msa0819670 AT2G25450.1 31.959 291 163 11 6 281 56 326 2.25e-31 121
Msa0819670 AT2G30840.3 30.667 300 168 11 16 304 72 342 2.39e-31 121
Msa0819670 AT1G06620.2 32.468 231 138 6 4 224 61 283 3.28e-31 119
Msa0819670 AT5G54000.1 29.508 244 151 6 38 274 1 230 1.15e-30 117
Msa0819670 AT1G03400.1 33.203 256 136 10 22 265 67 299 1.46e-30 119
Msa0819670 AT1G06645.1 28.840 319 184 13 2 304 74 365 2.38e-30 119
Msa0819670 AT3G19010.3 29.693 293 167 9 5 290 28 288 3.63e-30 117
Msa0819670 AT3G19000.2 30.400 250 148 8 6 233 33 278 1.61e-29 114
Msa0819670 AT5G63600.1 28.772 285 175 8 22 299 47 310 1.78e-29 115
Msa0819670 AT5G43450.2 30.603 232 143 8 1 223 57 279 2.22e-29 114
Msa0819670 AT5G63600.2 28.772 285 176 8 22 299 47 311 2.99e-29 114
Msa0819670 AT3G61400.2 33.621 232 136 9 3 224 65 288 6.27e-29 113
Msa0819670 AT4G25310.2 28.421 285 149 6 22 299 70 306 9.07e-29 113
Msa0819670 AT1G60980.1 27.365 296 172 9 25 301 80 351 1.69e-28 114
Msa0819670 AT1G44090.1 28.344 314 193 9 3 301 61 357 1.74e-28 114
Msa0819670 AT3G19010.2 30.864 243 143 6 6 227 29 267 2.31e-28 112
Msa0819670 AT3G60290.1 28.896 308 186 11 3 299 50 335 3.53e-28 112
Msa0819670 AT5G07200.1 27.414 321 190 12 3 301 56 355 3.93e-28 112
Msa0819670 AT1G50960.1 27.778 270 173 6 3 266 38 291 1.29e-27 110
Msa0819670 AT1G80330.1 27.331 311 191 9 4 301 48 336 2.14e-27 110
Msa0819670 AT4G25300.2 32.275 189 111 3 111 299 72 243 2.46e-27 108
Msa0819670 AT2G44800.1 26.829 328 208 10 4 321 51 356 2.75e-27 110
Msa0819670 AT1G06650.1 28.063 253 154 9 2 240 61 299 2.77e-27 109
Msa0819670 AT5G07480.1 30.389 283 158 11 6 269 45 307 3.12e-27 110
Msa0819670 AT1G03400.2 31.136 273 149 11 21 265 66 327 6.28e-27 109
Msa0819670 AT1G06640.2 28.750 240 152 6 6 234 65 296 1.05e-26 107
Msa0819670 AT2G30840.2 31.481 216 132 6 16 223 72 279 1.27e-26 107
Msa0819670 AT4G21690.1 26.263 297 183 9 25 304 61 338 2.59e-26 107
Msa0819670 AT5G59540.2 30.043 233 145 8 3 224 59 284 4.83e-26 105
Msa0819670 AT5G43440.2 30.000 240 132 8 3 223 60 282 6.50e-26 105
Msa0819670 AT1G06640.3 29.130 230 144 6 2 220 61 282 1.59e-25 103
Msa0819670 AT1G78440.1 26.214 309 192 10 5 298 15 302 2.52e-25 104
Msa0819670 AT5G51810.1 25.949 316 193 10 3 301 61 352 1.17e-24 103
Msa0819670 AT4G25420.1 24.921 317 199 9 3 301 59 354 1.53e-24 102
Msa0819670 AT3G47190.1 29.252 294 155 11 3 272 30 294 6.11e-24 100
Msa0819670 AT4G23340.1 27.609 297 160 10 28 301 30 294 8.56e-24 100
Msa0819670 AT5G63580.2 32.759 232 142 7 1 224 15 240 5.04e-23 96.3
Msa0819670 AT5G63580.1 32.609 230 141 7 1 222 15 238 7.32e-23 95.9
Msa0819670 AT1G04380.2 30.736 231 135 8 6 224 46 263 7.55e-23 96.3
Msa0819670 AT5G12270.1 38.889 144 70 5 163 302 214 343 3.52e-22 95.9
Msa0819670 AT1G30040.1 26.923 286 181 10 24 298 44 312 5.43e-22 95.1
Msa0819670 AT5G43935.1 28.136 295 155 11 28 306 39 292 9.26e-22 94.0
Msa0819670 AT5G58660.1 26.490 302 168 12 3 272 32 311 2.34e-21 93.6
Msa0819670 AT3G49620.1 26.578 301 183 9 20 299 59 342 3.78e-21 93.2
Msa0819670 AT5G51310.1 24.847 326 193 12 1 301 1 299 1.89e-20 90.9
Msa0819670 AT2G34555.1 26.159 302 170 10 20 298 36 307 2.90e-20 90.5
Msa0819670 AT3G50210.4 24.026 308 188 8 20 299 33 322 7.91e-20 89.0
Msa0819670 AT3G50210.1 24.026 308 188 8 20 299 33 322 7.91e-20 89.0
Msa0819670 AT3G50210.3 24.026 308 188 8 20 299 33 322 7.91e-20 89.0
Msa0819670 AT1G02400.1 26.126 333 200 15 4 318 23 327 1.64e-19 88.2
Msa0819670 AT5G07480.2 32.039 206 105 7 74 269 18 198 2.35e-19 86.3
Msa0819670 AT3G49630.1 25.914 301 185 9 20 299 34 317 5.52e-19 86.7
Msa0819670 AT3G49630.3 25.914 301 185 9 20 299 30 313 5.55e-19 86.7
Msa0819670 AT5G58660.2 25.692 253 147 10 3 224 32 274 5.63e-17 80.1
Msa0819670 AT1G47990.1 24.085 328 192 11 4 307 14 308 2.03e-16 79.3
Msa0819670 AT4G23340.2 31.443 194 108 8 115 301 1 176 3.06e-16 76.6
Msa0819670 AT5G51810.2 26.446 242 152 8 3 227 61 293 3.37e-16 78.2
Msa0819670 AT1G14130.1 24.127 315 211 8 3 311 4 296 3.83e-16 78.2
Msa0819670 AT3G49630.2 29.703 202 121 6 102 299 60 244 2.08e-15 75.5
Msa0819670 AT3G50210.2 26.829 205 129 5 102 299 50 240 1.45e-13 70.1
Msa0819670 AT1G35190.1 25.321 312 175 12 2 276 1 291 7.73e-13 68.9
Msa0819670 AT1G14120.2 24.291 247 162 6 23 263 23 250 1.52e-12 67.8
Msa0819670 AT1G14120.1 24.291 247 162 6 23 263 23 250 1.52e-12 67.8
Msa0819670 AT1G14120.3 24.291 247 162 6 23 263 23 250 1.52e-12 67.8
Msa0819670 AT3G46500.7 24.060 266 166 10 21 266 30 279 3.47e-11 63.5

Find 101 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTCTTCAAACACAAATTT+TGG 0.052810 5_3:+56426138 None:intergenic
GAAAGAATCAAATGTTAATT+TGG 0.112620 5_3:-56426058 Msa0819670:CDS
AATTAACATTTGATTCTTTC+AGG 0.123673 5_3:+56426061 None:intergenic
AGTTTCCCCAAGCTAATAAT+TGG 0.192930 5_3:+56427817 None:intergenic
CCCTTCACCAGCTCTGGATT+TGG 0.233913 5_3:+56427051 None:intergenic
ATCTCTGAAATGTTTGATTC+AGG 0.255183 5_3:+56427433 None:intergenic
GAAACTAGCAGAAGAGCTTT+TGG 0.259764 5_3:-56427181 Msa0819670:CDS
TTTCATTAAACAATTACTAT+TGG 0.275044 5_3:+56426033 None:intergenic
ATGCATGGAGCATAGGTTTA+AGG 0.281531 5_3:-56427542 Msa0819670:CDS
AAATGGTAATAATAATAATT+AGG 0.288540 5_3:-56425965 Msa0819670:three_prime_UTR
TCTTTCAGGGCTTCAAATCT+TGG 0.295919 5_3:+56426075 None:intergenic
TAAGGATGCTTGTGAGAATT+GGG 0.296497 5_3:-56427758 Msa0819670:CDS
AGAGAAAGGTTACCTTAAAA+AGG 0.302113 5_3:-56427133 Msa0819670:CDS
TGGTATACCCCATGACCTTA+TGG 0.305963 5_3:-56427602 Msa0819670:CDS
TTAAGGATGCTTGTGAGAAT+TGG 0.311709 5_3:-56427759 Msa0819670:CDS
CCTTCACCAGCTCTGGATTT+GGG 0.325710 5_3:+56427052 None:intergenic
GCATTTCCTATAGTGCTCTT+TGG 0.346722 5_3:+56427561 None:intergenic
GGATCAAGAGGACCAACTTT+TGG 0.347061 5_3:-56427102 Msa0819670:CDS
CCAAACTGAGGTCAAAGATA+TGG 0.350187 5_3:-56427488 Msa0819670:CDS
CCATATCTTTGACCTCAGTT+TGG 0.352945 5_3:+56427488 None:intergenic
AATTTCCCAATTATTAGCTT+GGG 0.353546 5_3:-56427823 Msa0819670:CDS
CAACAATAGAGTGGCGCATT+GGG 0.358833 5_3:+56426926 None:intergenic
AAAGAATCAAATGTTAATTT+GGG 0.360868 5_3:-56426057 Msa0819670:CDS
AGACACCATGGAGAAAATTA+AGG 0.373733 5_3:-56427776 Msa0819670:CDS
AACAAAATATAAGACATTTA+CGG 0.378807 5_3:+56425932 None:intergenic
AGGAATCATCCTTCTCTTCC+AGG 0.379674 5_3:-56427004 Msa0819670:CDS
AATTATTATACTTTCTATGA+TGG 0.393940 5_3:-56425705 Msa0819670:three_prime_UTR
TAAATAAGTAAAATAAATAT+AGG 0.395570 5_3:-56426008 Msa0819670:three_prime_UTR
GAATTTCCCAATTATTAGCT+TGG 0.397293 5_3:-56427824 Msa0819670:CDS
TGAGAATTGGGGATTCTTTG+AGG 0.409466 5_3:-56427746 Msa0819670:intron
CGAAGACCCTTCACCAGCTC+TGG 0.409771 5_3:+56427045 None:intergenic
ATTTGGGCATTGAGGGTAGT+TGG 0.418782 5_3:+56427068 None:intergenic
GGTTGACCAAAGAGCACTAT+AGG 0.423088 5_3:-56427567 Msa0819670:CDS
TTGAGGGTAGTTGGCTACTT+TGG 0.423692 5_3:+56427077 None:intergenic
TGTACAACTTTGTAACTTGA+AGG 0.431335 5_3:-56425799 Msa0819670:three_prime_UTR
TGCTTTGAAATTTCATGCTA+AGG 0.438558 5_3:-56426100 Msa0819670:CDS
CCTTCTCTTCCAGGATGATA+AGG 0.441979 5_3:-56426995 Msa0819670:CDS
GTTTCCCCAAGCTAATAATT+GGG 0.442224 5_3:+56427818 None:intergenic
CTGAGGTCAAAGATATGGAT+TGG 0.449050 5_3:-56427483 Msa0819670:CDS
GATTTGTTATGTGAGAATCT+TGG 0.452104 5_3:-56427159 Msa0819670:CDS
ATTAACATTTGATTCTTTCA+GGG 0.452549 5_3:+56426062 None:intergenic
GCTCTGGATTTGGGCATTGA+GGG 0.456238 5_3:+56427061 None:intergenic
TCTCTGAAATGTTTGATTCA+GGG 0.461275 5_3:+56427434 None:intergenic
ACTATATTTATCATATATGT+TGG 0.464707 5_3:+56425621 None:intergenic
ATATGCATGTGTTTCTCAAA+TGG 0.466981 5_3:-56425982 Msa0819670:three_prime_UTR
TACAAACAGGTAATAACAAA+TGG 0.471726 5_3:-56426348 Msa0819670:intron
GCTACTTTGGTGCCAAAAGT+TGG 0.477560 5_3:+56427090 None:intergenic
ACCTCTCCAATGTGTCCATA+AGG 0.477763 5_3:+56427587 None:intergenic
AGCTCTGGATTTGGGCATTG+AGG 0.479340 5_3:+56427060 None:intergenic
CTGATCTCAGTGATGAATAC+AGG 0.479662 5_3:-56427408 Msa0819670:intron
ATTAGCTTGGGGAAACTCAA+TGG 0.480588 5_3:-56427811 Msa0819670:CDS
CACTCTATTGTTGTCAACCT+TGG 0.486458 5_3:-56426916 Msa0819670:CDS
CTTCGTGCTCACACCGATGC+CGG 0.487587 5_3:-56427027 Msa0819670:CDS
TTACCCTGCTCCAGAACTGT+TGG 0.490800 5_3:-56426193 Msa0819670:CDS
CGTGTGATAGCACAAACAAA+TGG 0.493222 5_3:-56426267 Msa0819670:CDS
TGAGGTCAAAGATATGGATT+GGG 0.504452 5_3:-56427482 Msa0819670:CDS
CCAATGTGTCCATAAGGTCA+TGG 0.507048 5_3:+56427593 None:intergenic
GAAACGAATTTACCTCAAGT+TGG 0.510428 5_3:+56426890 None:intergenic
CAATGTGTCCATAAGGTCAT+GGG 0.512658 5_3:+56427594 None:intergenic
ACAACAATAGAGTGGCGCAT+TGG 0.513038 5_3:+56426925 None:intergenic
AAGGATGCTTGTGAGAATTG+GGG 0.513241 5_3:-56427757 Msa0819670:CDS
CTGTATTCATCACTGAGATC+AGG 0.514220 5_3:+56427409 None:intergenic
AAACTCTAGCTGGTGAATCA+TGG 0.516202 5_3:-56427622 Msa0819670:intron
GTGGTACAGGAAAGTGATGA+AGG 0.524670 5_3:-56427223 Msa0819670:intron
GAAGAGAAGGATGATTCCTC+CGG 0.529315 5_3:+56427008 None:intergenic
CCTTATCATCCTGGAAGAGA+AGG 0.530340 5_3:+56426995 None:intergenic
ATAGCATCATTCTACAACCC+TGG 0.534295 5_3:-56426231 Msa0819670:CDS
GGTCTACAATTGCTCAAAGA+TGG 0.538315 5_3:-56426967 Msa0819670:CDS
CATTTGTTTGTGCTATCACA+CGG 0.538854 5_3:+56426268 None:intergenic
TAAATGACAGCATCACTCCC+AGG 0.539894 5_3:+56426213 None:intergenic
GACCACTGACCTTATCATCC+TGG 0.548790 5_3:+56426986 None:intergenic
CCCAAATCCAGAGCTGGTGA+AGG 0.554109 5_3:-56427052 Msa0819670:CDS
ATTCAGGGAGGTGACGAACA+TGG 0.554465 5_3:+56427449 None:intergenic
ATAGGAAATGCATGGAGCAT+AGG 0.560098 5_3:-56427549 Msa0819670:CDS
GAGAATCTTGGACTAGAGAA+AGG 0.561460 5_3:-56427147 Msa0819670:CDS
AAGGATGATTCCTCCGGCAT+CGG 0.565016 5_3:+56427014 None:intergenic
ATTTCCCAATTATTAGCTTG+GGG 0.571073 5_3:-56427822 Msa0819670:CDS
CCATGACCTTATGGACACAT+TGG 0.572011 5_3:-56427593 Msa0819670:CDS
AACAATAGAGTGGCGCATTG+GGG 0.574691 5_3:+56426927 None:intergenic
TAGCATCATTCTACAACCCT+GGG 0.578286 5_3:-56426230 Msa0819670:CDS
AGGGTTGTAGAATGATGCTA+TGG 0.587289 5_3:+56426233 None:intergenic
TTTCCAACAGTTCTGGAGCA+GGG 0.587837 5_3:+56426190 None:intergenic
TCAATGCCCAAATCCAGAGC+TGG 0.593557 5_3:-56427058 Msa0819670:CDS
CAACCTTGGTGACCAACTTG+AGG 0.598103 5_3:-56426902 Msa0819670:intron
AAGGAAGTAATATCAAGCAA+AGG 0.598298 5_3:-56427523 Msa0819670:CDS
AGGGAGGTGACGAACATGGA+AGG 0.611334 5_3:+56427453 None:intergenic
AAATGACAGCATCACTCCCA+GGG 0.625659 5_3:+56426214 None:intergenic
CCAAATCCAGAGCTGGTGAA+GGG 0.626529 5_3:-56427051 Msa0819670:CDS
AAATGGCAAGTACAAGAGTG+TGG 0.628137 5_3:-56426295 Msa0819670:CDS
AGAGCACTATAGGAAATGCA+TGG 0.631438 5_3:-56427557 Msa0819670:CDS
TTACCTCAAGTTGGTCACCA+AGG 0.638590 5_3:+56426899 None:intergenic
TTCCAGGATGATAAGGTCAG+TGG 0.641108 5_3:-56426988 Msa0819670:CDS
CGTGCTCACACCGATGCCGG+AGG 0.645285 5_3:-56427024 Msa0819670:CDS
ACAATAGAGTGGCGCATTGG+GGG 0.650237 5_3:+56426928 None:intergenic
AATTGCTCAAAGATGGCCAG+TGG 0.660439 5_3:-56426960 Msa0819670:CDS
CAAGGTTGACAACAATAGAG+TGG 0.673016 5_3:+56426917 None:intergenic
CTTAGATGCTGTCCAAACTG+AGG 0.673374 5_3:-56427500 Msa0819670:CDS
CTGAAATGTTTGATTCAGGG+AGG 0.675587 5_3:+56427437 None:intergenic
ACCTTATGGACACATTGGAG+AGG 0.684850 5_3:-56427588 Msa0819670:CDS
AATGTGTCCATAAGGTCATG+GGG 0.688791 5_3:+56427595 None:intergenic
TGTTGAGAGAAAAGACACCA+TGG 0.692596 5_3:-56427788 Msa0819670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTCAAAAAAAAAAAAAAAA+TGG - chr5_3:56427152-56427171 Msa0819670:CDS 10.0%
!! AAATGGTAATAATAATAATT+AGG - chr5_3:56427499-56427518 Msa0819670:CDS 10.0%
!! TCTCAAAAAAAAAAAAAAAA+TGG - chr5_3:56427152-56427171 Msa0819670:CDS 10.0%
!! AAATGGTAATAATAATAATT+AGG - chr5_3:56427499-56427518 Msa0819670:CDS 10.0%
!!! ATATTAGTGTCTAATATTTT+TGG + chr5_3:56427000-56427019 None:intergenic 15.0%
!! AAAGAATCAAATGTTAATTT+GGG - chr5_3:56427407-56427426 Msa0819670:intron 15.0%
!! TTTCATTAAACAATTACTAT+TGG + chr5_3:56427434-56427453 None:intergenic 15.0%
!! AACAAAATATAAGACATTTA+CGG + chr5_3:56427535-56427554 None:intergenic 15.0%
!! AATTATTATACTTTCTATGA+TGG - chr5_3:56427759-56427778 Msa0819670:CDS 15.0%
!! ACTATATTTATCATATATGT+TGG + chr5_3:56427846-56427865 None:intergenic 15.0%
!!! ATATTAGTGTCTAATATTTT+TGG + chr5_3:56427000-56427019 None:intergenic 15.0%
!! AAAGAATCAAATGTTAATTT+GGG - chr5_3:56427407-56427426 Msa0819670:intron 15.0%
!! TTTCATTAAACAATTACTAT+TGG + chr5_3:56427434-56427453 None:intergenic 15.0%
!! AACAAAATATAAGACATTTA+CGG + chr5_3:56427535-56427554 None:intergenic 15.0%
!! AATTATTATACTTTCTATGA+TGG - chr5_3:56427759-56427778 Msa0819670:CDS 15.0%
!! ACTATATTTATCATATATGT+TGG + chr5_3:56427846-56427865 None:intergenic 15.0%
!! TCATGATTCTAAATTTCTTA+TGG - chr5_3:56426213-56426232 Msa0819670:CDS 20.0%
!! TAAATTTCTTATGGTAATTG+TGG - chr5_3:56426222-56426241 Msa0819670:CDS 20.0%
!! CTAAATCTTGATTATATTGA+CGG - chr5_3:56426749-56426768 Msa0819670:intron 20.0%
!!! ATGTGTTAATTTTTTTTTGC+AGG + chr5_3:56426802-56426821 None:intergenic 20.0%
!! AAAATACCAAGTTTGAAAAT+TGG + chr5_3:56426841-56426860 None:intergenic 20.0%
!! CTAATATGAAAAATCATCTA+AGG - chr5_3:56427013-56427032 Msa0819670:CDS 20.0%
!! ATTAACATTTGATTCTTTCA+GGG + chr5_3:56427405-56427424 None:intergenic 20.0%
!! AATTAACATTTGATTCTTTC+AGG + chr5_3:56427406-56427425 None:intergenic 20.0%
!! GAAAGAATCAAATGTTAATT+TGG - chr5_3:56427406-56427425 Msa0819670:intron 20.0%
!!! AACGTTGTAAACTTTTTTTA+CGG - chr5_3:56427641-56427660 Msa0819670:intron 20.0%
!! TCATGATTCTAAATTTCTTA+TGG - chr5_3:56426213-56426232 Msa0819670:CDS 20.0%
!! TAAATTTCTTATGGTAATTG+TGG - chr5_3:56426222-56426241 Msa0819670:CDS 20.0%
!! CTAAATCTTGATTATATTGA+CGG - chr5_3:56426749-56426768 Msa0819670:intron 20.0%
!!! ATGTGTTAATTTTTTTTTGC+AGG + chr5_3:56426802-56426821 None:intergenic 20.0%
!! AAAATACCAAGTTTGAAAAT+TGG + chr5_3:56426841-56426860 None:intergenic 20.0%
!! CTAATATGAAAAATCATCTA+AGG - chr5_3:56427013-56427032 Msa0819670:CDS 20.0%
!! ATTAACATTTGATTCTTTCA+GGG + chr5_3:56427405-56427424 None:intergenic 20.0%
!! AATTAACATTTGATTCTTTC+AGG + chr5_3:56427406-56427425 None:intergenic 20.0%
!! GAAAGAATCAAATGTTAATT+TGG - chr5_3:56427406-56427425 Msa0819670:intron 20.0%
!!! AACGTTGTAAACTTTTTTTA+CGG - chr5_3:56427641-56427660 Msa0819670:intron 20.0%
!! AATTTCCCAATTATTAGCTT+GGG - chr5_3:56425641-56425660 Msa0819670:three_prime_UTR 25.0%
!!! GTTAGATAATGTTACTTTCT+TGG - chr5_3:56425792-56425811 Msa0819670:three_prime_UTR 25.0%
!!! TACCTTAAAAAGGCATTTTA+TGG - chr5_3:56426341-56426360 Msa0819670:CDS 25.0%
!! ATCCATAAAATGCCTTTTTA+AGG + chr5_3:56426346-56426365 None:intergenic 25.0%
! AAGGGTTGTTAAACAATTTA+TGG + chr5_3:56426692-56426711 None:intergenic 25.0%
!! AAAGATCCAATTTTCAAACT+TGG - chr5_3:56426832-56426851 Msa0819670:intron 25.0%
!!! CTAATATTTTTGGTCACATT+AGG + chr5_3:56426990-56427009 None:intergenic 25.0%
! TGAAAAATCATCTAAGGATA+CGG - chr5_3:56427019-56427038 Msa0819670:CDS 25.0%
! TACAAACAGGTAATAACAAA+TGG - chr5_3:56427116-56427135 Msa0819670:CDS 25.0%
!! ACTCTTCAAACACAAATTTT+GGG + chr5_3:56427328-56427347 None:intergenic 25.0%
!! TACTCTTCAAACACAAATTT+TGG + chr5_3:56427329-56427348 None:intergenic 25.0%
!! AGAAAAAACTCGCATTTTAT+AGG - chr5_3:56427593-56427612 Msa0819670:CDS 25.0%
!!! ACGTTGTAAACTTTTTTTAC+GGG - chr5_3:56427642-56427661 Msa0819670:intron 25.0%
!! AATTTCCCAATTATTAGCTT+GGG - chr5_3:56425641-56425660 Msa0819670:three_prime_UTR 25.0%
!!! GTTAGATAATGTTACTTTCT+TGG - chr5_3:56425792-56425811 Msa0819670:three_prime_UTR 25.0%
!!! TACCTTAAAAAGGCATTTTA+TGG - chr5_3:56426341-56426360 Msa0819670:CDS 25.0%
!! ATCCATAAAATGCCTTTTTA+AGG + chr5_3:56426346-56426365 None:intergenic 25.0%
! AAGGGTTGTTAAACAATTTA+TGG + chr5_3:56426692-56426711 None:intergenic 25.0%
!! AAAGATCCAATTTTCAAACT+TGG - chr5_3:56426832-56426851 Msa0819670:intron 25.0%
!!! CTAATATTTTTGGTCACATT+AGG + chr5_3:56426990-56427009 None:intergenic 25.0%
! TGAAAAATCATCTAAGGATA+CGG - chr5_3:56427019-56427038 Msa0819670:CDS 25.0%
! TACAAACAGGTAATAACAAA+TGG - chr5_3:56427116-56427135 Msa0819670:CDS 25.0%
!! ACTCTTCAAACACAAATTTT+GGG + chr5_3:56427328-56427347 None:intergenic 25.0%
!! TACTCTTCAAACACAAATTT+TGG + chr5_3:56427329-56427348 None:intergenic 25.0%
!! AGAAAAAACTCGCATTTTAT+AGG - chr5_3:56427593-56427612 Msa0819670:CDS 25.0%
!!! ACGTTGTAAACTTTTTTTAC+GGG - chr5_3:56427642-56427661 Msa0819670:intron 25.0%
GAATTTCCCAATTATTAGCT+TGG - chr5_3:56425640-56425659 Msa0819670:three_prime_UTR 30.0%
! ATTTCCCAATTATTAGCTTG+GGG - chr5_3:56425642-56425661 Msa0819670:three_prime_UTR 30.0%
! TTTGATTTCAAAACTCTAGC+TGG - chr5_3:56425832-56425851 Msa0819670:three_prime_UTR 30.0%
AAGGAAGTAATATCAAGCAA+AGG - chr5_3:56425941-56425960 Msa0819670:three_prime_UTR 30.0%
!! TCTCTGAAATGTTTGATTCA+GGG + chr5_3:56426033-56426052 None:intergenic 30.0%
!! ATCTCTGAAATGTTTGATTC+AGG + chr5_3:56426034-56426053 None:intergenic 30.0%
! TGATGAAGGAATTTTCTTTG+AGG - chr5_3:56426255-56426274 Msa0819670:CDS 30.0%
!! GATTTGTTATGTGAGAATCT+TGG - chr5_3:56426305-56426324 Msa0819670:CDS 30.0%
AGAGAAAGGTTACCTTAAAA+AGG - chr5_3:56426331-56426350 Msa0819670:CDS 30.0%
TTTGATGAATTGAGATCAGA+CGG + chr5_3:56426901-56426920 None:intergenic 30.0%
TCTCAATTCATCAAAATACG+TGG - chr5_3:56426906-56426925 Msa0819670:CDS 30.0%
CGTAAAAAATTTGACTGCAA+AGG - chr5_3:56426932-56426951 Msa0819670:CDS 30.0%
CTTATGTCAAATCTTGTGTA+TGG + chr5_3:56426960-56426979 None:intergenic 30.0%
ATCTTTCATGTGCAAAAAAC+AGG - chr5_3:56427070-56427089 Msa0819670:CDS 30.0%
! TGACACTATTTTGTACAAAC+AGG - chr5_3:56427103-56427122 Msa0819670:CDS 30.0%
!! TGCTTTGAAATTTCATGCTA+AGG - chr5_3:56427364-56427383 Msa0819670:intron 30.0%
ATATGCATGTGTTTCTCAAA+TGG - chr5_3:56427482-56427501 Msa0819670:CDS 30.0%
TGTACAACTTTGTAACTTGA+AGG - chr5_3:56427665-56427684 Msa0819670:intron 30.0%
GAATTTCCCAATTATTAGCT+TGG - chr5_3:56425640-56425659 Msa0819670:three_prime_UTR 30.0%
! ATTTCCCAATTATTAGCTTG+GGG - chr5_3:56425642-56425661 Msa0819670:three_prime_UTR 30.0%
! TTTGATTTCAAAACTCTAGC+TGG - chr5_3:56425832-56425851 Msa0819670:three_prime_UTR 30.0%
AAGGAAGTAATATCAAGCAA+AGG - chr5_3:56425941-56425960 Msa0819670:three_prime_UTR 30.0%
!! TCTCTGAAATGTTTGATTCA+GGG + chr5_3:56426033-56426052 None:intergenic 30.0%
!! ATCTCTGAAATGTTTGATTC+AGG + chr5_3:56426034-56426053 None:intergenic 30.0%
! TGATGAAGGAATTTTCTTTG+AGG - chr5_3:56426255-56426274 Msa0819670:CDS 30.0%
!! GATTTGTTATGTGAGAATCT+TGG - chr5_3:56426305-56426324 Msa0819670:CDS 30.0%
AGAGAAAGGTTACCTTAAAA+AGG - chr5_3:56426331-56426350 Msa0819670:CDS 30.0%
TTTGATGAATTGAGATCAGA+CGG + chr5_3:56426901-56426920 None:intergenic 30.0%
TCTCAATTCATCAAAATACG+TGG - chr5_3:56426906-56426925 Msa0819670:CDS 30.0%
CGTAAAAAATTTGACTGCAA+AGG - chr5_3:56426932-56426951 Msa0819670:CDS 30.0%
CTTATGTCAAATCTTGTGTA+TGG + chr5_3:56426960-56426979 None:intergenic 30.0%
ATCTTTCATGTGCAAAAAAC+AGG - chr5_3:56427070-56427089 Msa0819670:CDS 30.0%
! TGACACTATTTTGTACAAAC+AGG - chr5_3:56427103-56427122 Msa0819670:CDS 30.0%
!! TGCTTTGAAATTTCATGCTA+AGG - chr5_3:56427364-56427383 Msa0819670:intron 30.0%
ATATGCATGTGTTTCTCAAA+TGG - chr5_3:56427482-56427501 Msa0819670:CDS 30.0%
TGTACAACTTTGTAACTTGA+AGG - chr5_3:56427665-56427684 Msa0819670:intron 30.0%
GTTTCCCCAAGCTAATAATT+GGG + chr5_3:56425649-56425668 None:intergenic 35.0%
AGTTTCCCCAAGCTAATAAT+TGG + chr5_3:56425650-56425669 None:intergenic 35.0%
AGACACCATGGAGAAAATTA+AGG - chr5_3:56425688-56425707 Msa0819670:three_prime_UTR 35.0%
! AGCATCCTTAATTTTCTCCA+TGG + chr5_3:56425696-56425715 None:intergenic 35.0%
TTAAGGATGCTTGTGAGAAT+TGG - chr5_3:56425705-56425724 Msa0819670:three_prime_UTR 35.0%
TAAGGATGCTTGTGAGAATT+GGG - chr5_3:56425706-56425725 Msa0819670:three_prime_UTR 35.0%
TGAGGTCAAAGATATGGATT+GGG - chr5_3:56425982-56426001 Msa0819670:three_prime_UTR 35.0%
TCTTATGGTAATTGTGGTAC+AGG - chr5_3:56426228-56426247 Msa0819670:CDS 35.0%
!! AAGGCATTTTATGGATCAAG+AGG - chr5_3:56426350-56426369 Msa0819670:intron 35.0%
GAAACGAATTTACCTCAAGT+TGG + chr5_3:56426577-56426596 None:intergenic 35.0%
! AATGAGAGTTGACTTAGCAA+AGG + chr5_3:56426599-56426618 None:intergenic 35.0%
GTGTAAAGTGAGAAAGTCAA+GGG + chr5_3:56426710-56426729 None:intergenic 35.0%
AGTGTAAAGTGAGAAAGTCA+AGG + chr5_3:56426711-56426730 None:intergenic 35.0%
!!! TTTTTTGCAGGCTACGATAT+GGG + chr5_3:56426790-56426809 None:intergenic 35.0%
!!! TTTTTTTGCAGGCTACGATA+TGG + chr5_3:56426791-56426810 None:intergenic 35.0%
CATTTGTTTGTGCTATCACA+CGG + chr5_3:56427199-56427218 None:intergenic 35.0%
GTTTCCCCAAGCTAATAATT+GGG + chr5_3:56425649-56425668 None:intergenic 35.0%
AGTTTCCCCAAGCTAATAAT+TGG + chr5_3:56425650-56425669 None:intergenic 35.0%
AGACACCATGGAGAAAATTA+AGG - chr5_3:56425688-56425707 Msa0819670:three_prime_UTR 35.0%
! AGCATCCTTAATTTTCTCCA+TGG + chr5_3:56425696-56425715 None:intergenic 35.0%
TTAAGGATGCTTGTGAGAAT+TGG - chr5_3:56425705-56425724 Msa0819670:three_prime_UTR 35.0%
TAAGGATGCTTGTGAGAATT+GGG - chr5_3:56425706-56425725 Msa0819670:three_prime_UTR 35.0%
TGAGGTCAAAGATATGGATT+GGG - chr5_3:56425982-56426001 Msa0819670:three_prime_UTR 35.0%
TCTTATGGTAATTGTGGTAC+AGG - chr5_3:56426228-56426247 Msa0819670:CDS 35.0%
!! AAGGCATTTTATGGATCAAG+AGG - chr5_3:56426350-56426369 Msa0819670:intron 35.0%
GAAACGAATTTACCTCAAGT+TGG + chr5_3:56426577-56426596 None:intergenic 35.0%
! AATGAGAGTTGACTTAGCAA+AGG + chr5_3:56426599-56426618 None:intergenic 35.0%
GTGTAAAGTGAGAAAGTCAA+GGG + chr5_3:56426710-56426729 None:intergenic 35.0%
AGTGTAAAGTGAGAAAGTCA+AGG + chr5_3:56426711-56426730 None:intergenic 35.0%
!!! TTTTTTGCAGGCTACGATAT+GGG + chr5_3:56426790-56426809 None:intergenic 35.0%
!!! TTTTTTTGCAGGCTACGATA+TGG + chr5_3:56426791-56426810 None:intergenic 35.0%
CATTTGTTTGTGCTATCACA+CGG + chr5_3:56427199-56427218 None:intergenic 35.0%
! ATTAGCTTGGGGAAACTCAA+TGG - chr5_3:56425653-56425672 Msa0819670:three_prime_UTR 40.0%
TGTTGAGAGAAAAGACACCA+TGG - chr5_3:56425676-56425695 Msa0819670:three_prime_UTR 40.0%
AAGGATGCTTGTGAGAATTG+GGG - chr5_3:56425707-56425726 Msa0819670:three_prime_UTR 40.0%
TGAGAATTGGGGATTCTTTG+AGG - chr5_3:56425718-56425737 Msa0819670:three_prime_UTR 40.0%
AAACTCTAGCTGGTGAATCA+TGG - chr5_3:56425842-56425861 Msa0819670:three_prime_UTR 40.0%
AATGTGTCCATAAGGTCATG+GGG + chr5_3:56425872-56425891 None:intergenic 40.0%
CAATGTGTCCATAAGGTCAT+GGG + chr5_3:56425873-56425892 None:intergenic 40.0%
GCATTTCCTATAGTGCTCTT+TGG + chr5_3:56425906-56425925 None:intergenic 40.0%
! AGAGCACTATAGGAAATGCA+TGG - chr5_3:56425907-56425926 Msa0819670:three_prime_UTR 40.0%
ATAGGAAATGCATGGAGCAT+AGG - chr5_3:56425915-56425934 Msa0819670:three_prime_UTR 40.0%
ATGCATGGAGCATAGGTTTA+AGG - chr5_3:56425922-56425941 Msa0819670:three_prime_UTR 40.0%
CCATATCTTTGACCTCAGTT+TGG + chr5_3:56425979-56425998 None:intergenic 40.0%
CCAAACTGAGGTCAAAGATA+TGG - chr5_3:56425976-56425995 Msa0819670:three_prime_UTR 40.0%
CTGAGGTCAAAGATATGGAT+TGG - chr5_3:56425981-56426000 Msa0819670:three_prime_UTR 40.0%
CTGAAATGTTTGATTCAGGG+AGG + chr5_3:56426030-56426049 None:intergenic 40.0%
CTGTATTCATCACTGAGATC+AGG + chr5_3:56426058-56426077 None:intergenic 40.0%
CTGATCTCAGTGATGAATAC+AGG - chr5_3:56426056-56426075 Msa0819670:CDS 40.0%
! GAAACTAGCAGAAGAGCTTT+TGG - chr5_3:56426283-56426302 Msa0819670:CDS 40.0%
! GAGAATCTTGGACTAGAGAA+AGG - chr5_3:56426317-56426336 Msa0819670:CDS 40.0%
GGTCTACAATTGCTCAAAGA+TGG - chr5_3:56426497-56426516 Msa0819670:intron 40.0%
CAAGGTTGACAACAATAGAG+TGG + chr5_3:56426550-56426569 None:intergenic 40.0%
CACTCTATTGTTGTCAACCT+TGG - chr5_3:56426548-56426567 Msa0819670:intron 40.0%
TCCATATTAGTCCTTCGATC+TGG - chr5_3:56426644-56426663 Msa0819670:intron 40.0%
! TTTTTGCAGGCTACGATATG+GGG + chr5_3:56426789-56426808 None:intergenic 40.0%
AAATGGCAAGTACAAGAGTG+TGG - chr5_3:56427169-56427188 Msa0819670:CDS 40.0%
CGTGTGATAGCACAAACAAA+TGG - chr5_3:56427197-56427216 Msa0819670:CDS 40.0%
AGGGTTGTAGAATGATGCTA+TGG + chr5_3:56427234-56427253 None:intergenic 40.0%
ATAGCATCATTCTACAACCC+TGG - chr5_3:56427233-56427252 Msa0819670:intron 40.0%
TAGCATCATTCTACAACCCT+GGG - chr5_3:56427234-56427253 Msa0819670:intron 40.0%
TCTTTCAGGGCTTCAAATCT+TGG + chr5_3:56427392-56427411 None:intergenic 40.0%
! ATTAGCTTGGGGAAACTCAA+TGG - chr5_3:56425653-56425672 Msa0819670:three_prime_UTR 40.0%
TGTTGAGAGAAAAGACACCA+TGG - chr5_3:56425676-56425695 Msa0819670:three_prime_UTR 40.0%
AAGGATGCTTGTGAGAATTG+GGG - chr5_3:56425707-56425726 Msa0819670:three_prime_UTR 40.0%
TGAGAATTGGGGATTCTTTG+AGG - chr5_3:56425718-56425737 Msa0819670:three_prime_UTR 40.0%
AAACTCTAGCTGGTGAATCA+TGG - chr5_3:56425842-56425861 Msa0819670:three_prime_UTR 40.0%
AATGTGTCCATAAGGTCATG+GGG + chr5_3:56425872-56425891 None:intergenic 40.0%
CAATGTGTCCATAAGGTCAT+GGG + chr5_3:56425873-56425892 None:intergenic 40.0%
GCATTTCCTATAGTGCTCTT+TGG + chr5_3:56425906-56425925 None:intergenic 40.0%
! AGAGCACTATAGGAAATGCA+TGG - chr5_3:56425907-56425926 Msa0819670:three_prime_UTR 40.0%
ATAGGAAATGCATGGAGCAT+AGG - chr5_3:56425915-56425934 Msa0819670:three_prime_UTR 40.0%
ATGCATGGAGCATAGGTTTA+AGG - chr5_3:56425922-56425941 Msa0819670:three_prime_UTR 40.0%
CCATATCTTTGACCTCAGTT+TGG + chr5_3:56425979-56425998 None:intergenic 40.0%
CCAAACTGAGGTCAAAGATA+TGG - chr5_3:56425976-56425995 Msa0819670:three_prime_UTR 40.0%
CTGAGGTCAAAGATATGGAT+TGG - chr5_3:56425981-56426000 Msa0819670:three_prime_UTR 40.0%
CTGAAATGTTTGATTCAGGG+AGG + chr5_3:56426030-56426049 None:intergenic 40.0%
CTGTATTCATCACTGAGATC+AGG + chr5_3:56426058-56426077 None:intergenic 40.0%
CTGATCTCAGTGATGAATAC+AGG - chr5_3:56426056-56426075 Msa0819670:CDS 40.0%
! GAAACTAGCAGAAGAGCTTT+TGG - chr5_3:56426283-56426302 Msa0819670:CDS 40.0%
! GAGAATCTTGGACTAGAGAA+AGG - chr5_3:56426317-56426336 Msa0819670:CDS 40.0%
GGTCTACAATTGCTCAAAGA+TGG - chr5_3:56426497-56426516 Msa0819670:intron 40.0%
CAAGGTTGACAACAATAGAG+TGG + chr5_3:56426550-56426569 None:intergenic 40.0%
CACTCTATTGTTGTCAACCT+TGG - chr5_3:56426548-56426567 Msa0819670:intron 40.0%
TCCATATTAGTCCTTCGATC+TGG - chr5_3:56426644-56426663 Msa0819670:intron 40.0%
! TTTTTGCAGGCTACGATATG+GGG + chr5_3:56426789-56426808 None:intergenic 40.0%
AAATGGCAAGTACAAGAGTG+TGG - chr5_3:56427169-56427188 Msa0819670:CDS 40.0%
CGTGTGATAGCACAAACAAA+TGG - chr5_3:56427197-56427216 Msa0819670:CDS 40.0%
AGGGTTGTAGAATGATGCTA+TGG + chr5_3:56427234-56427253 None:intergenic 40.0%
ATAGCATCATTCTACAACCC+TGG - chr5_3:56427233-56427252 Msa0819670:intron 40.0%
TAGCATCATTCTACAACCCT+GGG - chr5_3:56427234-56427253 Msa0819670:intron 40.0%
TCTTTCAGGGCTTCAAATCT+TGG + chr5_3:56427392-56427411 None:intergenic 40.0%
TGGTATACCCCATGACCTTA+TGG - chr5_3:56425862-56425881 Msa0819670:three_prime_UTR 45.0%
CCAATGTGTCCATAAGGTCA+TGG + chr5_3:56425874-56425893 None:intergenic 45.0%
CCATGACCTTATGGACACAT+TGG - chr5_3:56425871-56425890 Msa0819670:three_prime_UTR 45.0%
ACCTTATGGACACATTGGAG+AGG - chr5_3:56425876-56425895 Msa0819670:three_prime_UTR 45.0%
ACCTCTCCAATGTGTCCATA+AGG + chr5_3:56425880-56425899 None:intergenic 45.0%
!! GGTTGACCAAAGAGCACTAT+AGG - chr5_3:56425897-56425916 Msa0819670:three_prime_UTR 45.0%
CTTAGATGCTGTCCAAACTG+AGG - chr5_3:56425964-56425983 Msa0819670:three_prime_UTR 45.0%
GTGGTACAGGAAAGTGATGA+AGG - chr5_3:56426241-56426260 Msa0819670:CDS 45.0%
! GGATCAAGAGGACCAACTTT+TGG - chr5_3:56426362-56426381 Msa0819670:intron 45.0%
!! GCTACTTTGGTGCCAAAAGT+TGG + chr5_3:56426377-56426396 None:intergenic 45.0%
TTGAGGGTAGTTGGCTACTT+TGG + chr5_3:56426390-56426409 None:intergenic 45.0%
!! ATTTGGGCATTGAGGGTAGT+TGG + chr5_3:56426399-56426418 None:intergenic 45.0%
GAAGAGAAGGATGATTCCTC+CGG + chr5_3:56426459-56426478 None:intergenic 45.0%
AGGAATCATCCTTCTCTTCC+AGG - chr5_3:56426460-56426479 Msa0819670:intron 45.0%
CCTTATCATCCTGGAAGAGA+AGG + chr5_3:56426472-56426491 None:intergenic 45.0%
CCTTCTCTTCCAGGATGATA+AGG - chr5_3:56426469-56426488 Msa0819670:intron 45.0%
TTCCAGGATGATAAGGTCAG+TGG - chr5_3:56426476-56426495 Msa0819670:intron 45.0%
AATTGCTCAAAGATGGCCAG+TGG - chr5_3:56426504-56426523 Msa0819670:intron 45.0%
AACAATAGAGTGGCGCATTG+GGG + chr5_3:56426540-56426559 None:intergenic 45.0%
CAACAATAGAGTGGCGCATT+GGG + chr5_3:56426541-56426560 None:intergenic 45.0%
ACAACAATAGAGTGGCGCAT+TGG + chr5_3:56426542-56426561 None:intergenic 45.0%
!! TTACCTCAAGTTGGTCACCA+AGG + chr5_3:56426568-56426587 None:intergenic 45.0%
GCCAGATCGAAGGACTAATA+TGG + chr5_3:56426648-56426667 None:intergenic 45.0%
! TTCGATCTGGCTCCTCTAAA+GGG - chr5_3:56426657-56426676 Msa0819670:intron 45.0%
AAATGACAGCATCACTCCCA+GGG + chr5_3:56427253-56427272 None:intergenic 45.0%
TAAATGACAGCATCACTCCC+AGG + chr5_3:56427254-56427273 None:intergenic 45.0%
!! TTTCCAACAGTTCTGGAGCA+GGG + chr5_3:56427277-56427296 None:intergenic 45.0%
!!! TTTTCCAACAGTTCTGGAGC+AGG + chr5_3:56427278-56427297 None:intergenic 45.0%
! GCGTGTTTTTCCAACAGTTC+TGG + chr5_3:56427284-56427303 None:intergenic 45.0%
ACTGTTGGAAAAACACGCAG+AGG - chr5_3:56427286-56427305 Msa0819670:intron 45.0%
TGGTATACCCCATGACCTTA+TGG - chr5_3:56425862-56425881 Msa0819670:three_prime_UTR 45.0%
CCAATGTGTCCATAAGGTCA+TGG + chr5_3:56425874-56425893 None:intergenic 45.0%
CCATGACCTTATGGACACAT+TGG - chr5_3:56425871-56425890 Msa0819670:three_prime_UTR 45.0%
ACCTTATGGACACATTGGAG+AGG - chr5_3:56425876-56425895 Msa0819670:three_prime_UTR 45.0%
ACCTCTCCAATGTGTCCATA+AGG + chr5_3:56425880-56425899 None:intergenic 45.0%
!! GGTTGACCAAAGAGCACTAT+AGG - chr5_3:56425897-56425916 Msa0819670:three_prime_UTR 45.0%
CTTAGATGCTGTCCAAACTG+AGG - chr5_3:56425964-56425983 Msa0819670:three_prime_UTR 45.0%
GTGGTACAGGAAAGTGATGA+AGG - chr5_3:56426241-56426260 Msa0819670:CDS 45.0%
! GGATCAAGAGGACCAACTTT+TGG - chr5_3:56426362-56426381 Msa0819670:intron 45.0%
!! GCTACTTTGGTGCCAAAAGT+TGG + chr5_3:56426377-56426396 None:intergenic 45.0%
TTGAGGGTAGTTGGCTACTT+TGG + chr5_3:56426390-56426409 None:intergenic 45.0%
!! ATTTGGGCATTGAGGGTAGT+TGG + chr5_3:56426399-56426418 None:intergenic 45.0%
GAAGAGAAGGATGATTCCTC+CGG + chr5_3:56426459-56426478 None:intergenic 45.0%
AGGAATCATCCTTCTCTTCC+AGG - chr5_3:56426460-56426479 Msa0819670:intron 45.0%
CCTTATCATCCTGGAAGAGA+AGG + chr5_3:56426472-56426491 None:intergenic 45.0%
CCTTCTCTTCCAGGATGATA+AGG - chr5_3:56426469-56426488 Msa0819670:intron 45.0%
TTCCAGGATGATAAGGTCAG+TGG - chr5_3:56426476-56426495 Msa0819670:intron 45.0%
AATTGCTCAAAGATGGCCAG+TGG - chr5_3:56426504-56426523 Msa0819670:intron 45.0%
AACAATAGAGTGGCGCATTG+GGG + chr5_3:56426540-56426559 None:intergenic 45.0%
CAACAATAGAGTGGCGCATT+GGG + chr5_3:56426541-56426560 None:intergenic 45.0%
ACAACAATAGAGTGGCGCAT+TGG + chr5_3:56426542-56426561 None:intergenic 45.0%
!! TTACCTCAAGTTGGTCACCA+AGG + chr5_3:56426568-56426587 None:intergenic 45.0%
GCCAGATCGAAGGACTAATA+TGG + chr5_3:56426648-56426667 None:intergenic 45.0%
! TTCGATCTGGCTCCTCTAAA+GGG - chr5_3:56426657-56426676 Msa0819670:intron 45.0%
AAATGACAGCATCACTCCCA+GGG + chr5_3:56427253-56427272 None:intergenic 45.0%
TAAATGACAGCATCACTCCC+AGG + chr5_3:56427254-56427273 None:intergenic 45.0%
!! TTTCCAACAGTTCTGGAGCA+GGG + chr5_3:56427277-56427296 None:intergenic 45.0%
!!! TTTTCCAACAGTTCTGGAGC+AGG + chr5_3:56427278-56427297 None:intergenic 45.0%
! GCGTGTTTTTCCAACAGTTC+TGG + chr5_3:56427284-56427303 None:intergenic 45.0%
ACTGTTGGAAAAACACGCAG+AGG - chr5_3:56427286-56427305 Msa0819670:intron 45.0%
!! TAAATAAGTAAAATAAATAT+AGG - chr5_3:56427456-56427475 Msa0819670:CDS 5.0%
!! TAAATAAGTAAAATAAATAT+AGG - chr5_3:56427456-56427475 Msa0819670:CDS 5.0%
ATTCAGGGAGGTGACGAACA+TGG + chr5_3:56426018-56426037 None:intergenic 50.0%
!! GCTCTGGATTTGGGCATTGA+GGG + chr5_3:56426406-56426425 None:intergenic 50.0%
!! AGCTCTGGATTTGGGCATTG+AGG + chr5_3:56426407-56426426 None:intergenic 50.0%
TCAATGCCCAAATCCAGAGC+TGG - chr5_3:56426406-56426425 Msa0819670:intron 50.0%
!! CCTTCACCAGCTCTGGATTT+GGG + chr5_3:56426415-56426434 None:intergenic 50.0%
CCAAATCCAGAGCTGGTGAA+GGG - chr5_3:56426413-56426432 Msa0819670:intron 50.0%
AAGGATGATTCCTCCGGCAT+CGG + chr5_3:56426453-56426472 None:intergenic 50.0%
GACCACTGACCTTATCATCC+TGG + chr5_3:56426481-56426500 None:intergenic 50.0%
TTGGGGGAACATCAATCCAC+TGG + chr5_3:56426523-56426542 None:intergenic 50.0%
ACAATAGAGTGGCGCATTGG+GGG + chr5_3:56426539-56426558 None:intergenic 50.0%
! CAACCTTGGTGACCAACTTG+AGG - chr5_3:56426562-56426581 Msa0819670:intron 50.0%
! CTTTAGAGGAGCCAGATCGA+AGG + chr5_3:56426658-56426677 None:intergenic 50.0%
! CTTCGATCTGGCTCCTCTAA+AGG - chr5_3:56426656-56426675 Msa0819670:intron 50.0%
!! TGGTTTGCTGTGCCCTTTAG+AGG + chr5_3:56426672-56426691 None:intergenic 50.0%
TTACCCTGCTCCAGAACTGT+TGG - chr5_3:56427271-56427290 Msa0819670:intron 50.0%
ATTCAGGGAGGTGACGAACA+TGG + chr5_3:56426018-56426037 None:intergenic 50.0%
!! GCTCTGGATTTGGGCATTGA+GGG + chr5_3:56426406-56426425 None:intergenic 50.0%
!! AGCTCTGGATTTGGGCATTG+AGG + chr5_3:56426407-56426426 None:intergenic 50.0%
TCAATGCCCAAATCCAGAGC+TGG - chr5_3:56426406-56426425 Msa0819670:intron 50.0%
!! CCTTCACCAGCTCTGGATTT+GGG + chr5_3:56426415-56426434 None:intergenic 50.0%
CCAAATCCAGAGCTGGTGAA+GGG - chr5_3:56426413-56426432 Msa0819670:intron 50.0%
AAGGATGATTCCTCCGGCAT+CGG + chr5_3:56426453-56426472 None:intergenic 50.0%
GACCACTGACCTTATCATCC+TGG + chr5_3:56426481-56426500 None:intergenic 50.0%
TTGGGGGAACATCAATCCAC+TGG + chr5_3:56426523-56426542 None:intergenic 50.0%
ACAATAGAGTGGCGCATTGG+GGG + chr5_3:56426539-56426558 None:intergenic 50.0%
! CAACCTTGGTGACCAACTTG+AGG - chr5_3:56426562-56426581 Msa0819670:intron 50.0%
! CTTTAGAGGAGCCAGATCGA+AGG + chr5_3:56426658-56426677 None:intergenic 50.0%
! CTTCGATCTGGCTCCTCTAA+AGG - chr5_3:56426656-56426675 Msa0819670:intron 50.0%
!! TGGTTTGCTGTGCCCTTTAG+AGG + chr5_3:56426672-56426691 None:intergenic 50.0%
TTACCCTGCTCCAGAACTGT+TGG - chr5_3:56427271-56427290 Msa0819670:intron 50.0%
AGGGAGGTGACGAACATGGA+AGG + chr5_3:56426014-56426033 None:intergenic 55.0%
CCCAAATCCAGAGCTGGTGA+AGG - chr5_3:56426412-56426431 Msa0819670:intron 55.0%
!! CCCTTCACCAGCTCTGGATT+TGG + chr5_3:56426416-56426435 None:intergenic 55.0%
TTGCAGGCTACGATATGGGG+AGG + chr5_3:56426786-56426805 None:intergenic 55.0%
AGGGAGGTGACGAACATGGA+AGG + chr5_3:56426014-56426033 None:intergenic 55.0%
CCCAAATCCAGAGCTGGTGA+AGG - chr5_3:56426412-56426431 Msa0819670:intron 55.0%
!! CCCTTCACCAGCTCTGGATT+TGG + chr5_3:56426416-56426435 None:intergenic 55.0%
TTGCAGGCTACGATATGGGG+AGG + chr5_3:56426786-56426805 None:intergenic 55.0%
CGAAGACCCTTCACCAGCTC+TGG + chr5_3:56426422-56426441 None:intergenic 60.0%
CTTCGTGCTCACACCGATGC+CGG - chr5_3:56426437-56426456 Msa0819670:intron 60.0%
CAGGCTACGATATGGGGAGG+AGG + chr5_3:56426783-56426802 None:intergenic 60.0%
CGAAGACCCTTCACCAGCTC+TGG + chr5_3:56426422-56426441 None:intergenic 60.0%
CTTCGTGCTCACACCGATGC+CGG - chr5_3:56426437-56426456 Msa0819670:intron 60.0%
CAGGCTACGATATGGGGAGG+AGG + chr5_3:56426783-56426802 None:intergenic 60.0%
CGTGCTCACACCGATGCCGG+AGG - chr5_3:56426440-56426459 Msa0819670:intron 70.0%
CGTGCTCACACCGATGCCGG+AGG - chr5_3:56426440-56426459 Msa0819670:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 56425559 56427927 56425559 ID=Msa0819670;Name=Msa0819670
chr5_3 mRNA 56425559 56427927 56425559 ID=Msa0819670-mRNA-1;Parent=Msa0819670;Name=Msa0819670-mRNA-1;_AED=0.15;_eAED=0.15;_QI=73|1|1|1|1|1|4|479|330
chr5_3 exon 56425559 56426361 56425559 ID=Msa0819670-mRNA-1:exon:17063;Parent=Msa0819670-mRNA-1
chr5_3 exon 56426903 56427236 56426903 ID=Msa0819670-mRNA-1:exon:17062;Parent=Msa0819670-mRNA-1
chr5_3 exon 56427409 56427635 56427409 ID=Msa0819670-mRNA-1:exon:17061;Parent=Msa0819670-mRNA-1
chr5_3 exon 56427747 56427927 56427747 ID=Msa0819670-mRNA-1:exon:17060;Parent=Msa0819670-mRNA-1
chr5_3 five_prime_UTR 56427855 56427927 56427855 ID=Msa0819670-mRNA-1:five_prime_utr;Parent=Msa0819670-mRNA-1
chr5_3 CDS 56427747 56427854 56427747 ID=Msa0819670-mRNA-1:cds;Parent=Msa0819670-mRNA-1
chr5_3 CDS 56427409 56427635 56427409 ID=Msa0819670-mRNA-1:cds;Parent=Msa0819670-mRNA-1
chr5_3 CDS 56426903 56427236 56426903 ID=Msa0819670-mRNA-1:cds;Parent=Msa0819670-mRNA-1
chr5_3 CDS 56426038 56426361 56426038 ID=Msa0819670-mRNA-1:cds;Parent=Msa0819670-mRNA-1
chr5_3 three_prime_UTR 56425559 56426037 56425559 ID=Msa0819670-mRNA-1:three_prime_utr;Parent=Msa0819670-mRNA-1
Gene Sequence

>Msa0819670

ATGATGATGAATTTCCCAATTATTAGCTTGGGGAAACTCAATGGTGTTGAGAGAAAAGACACCATGGAGAAAATTAAGGATGCTTGTGAGAATTGGGGATTCTTTGAGCTGGTGAATCATGGTATACCCCATGACCTTATGGACACATTGGAGAGGTTGACCAAAGAGCACTATAGGAAATGCATGGAGCATAGGTTTAAGGAAGTAATATCAAGCAAAGGCTTAGATGCTGTCCAAACTGAGGTCAAAGATATGGATTGGGAAAGCACCTTCCATGTTCGTCACCTCCCTGAATCAAACATTTCAGAGATACCTGATCTCAGTGATGAATACAGGAAAGTGATGAAGGAATTTTCTTTGAGGTTAGAGAAACTAGCAGAAGAGCTTTTGGATTTGTTATGTGAGAATCTTGGACTAGAGAAAGGTTACCTTAAAAAGGCATTTTATGGATCAAGAGGACCAACTTTTGGCACCAAAGTAGCCAACTACCCTCAATGCCCAAATCCAGAGCTGGTGAAGGGTCTTCGTGCTCACACCGATGCCGGAGGAATCATCCTTCTCTTCCAGGATGATAAGGTCAGTGGTCTACAATTGCTCAAAGATGGCCAGTGGATTGATGTTCCCCCAATGCGCCACTCTATTGTTGTCAACCTTGGTGACCAACTTGAGGTAATAACAAATGGCAAGTACAAGATCTCTCAAAAAAAAAAAAAAAATGGCAAGTACAAGAGTGTGGAACACCGTGTGATAGCACAAACAAATGGAACAAGAATGTCCATAGCATCATTCTACAACCCTGGGAGTGATGCTGTCATTTACCCTGCTCCAGAACTGTTGGAAAAACACGCAGAGGAAAAACACAATGTGTACCCAAAATTTGTGTTTGAAGAGTACATGAAGATCTATGCTGCTTTGAAATTTCATGCTAAGGAACCAAGATTTGAAGCCCTGAAAGAATCAAATGTTAATTTGGGTCCAATAGTAATTGTTTAA

Protein sequence

>Msa0819670

MMMNFPIISLGKLNGVERKDTMEKIKDACENWGFFELVNHGIPHDLMDTLERLTKEHYRKCMEHRFKEVISSKGLDAVQTEVKDMDWESTFHVRHLPESNISEIPDLSDEYRKVMKEFSLRLEKLAEELLDLLCENLGLEKGYLKKAFYGSRGPTFGTKVANYPQCPNPELVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKISQKKKKNGKYKSVEHRVIAQTNGTRMSIASFYNPGSDAVIYPAPELLEKHAEEKHNVYPKFVFEEYMKIYAALKFHAKEPRFEALKESNVNLGPIVIV*