Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0874670 | XP_013451092.1 | 97.214 | 323 | 9 | 0 | 1 | 323 | 1 | 323 | 0.0 | 639 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0874670 | sp|Q8BGF9|S2544_MOUSE | 34.062 | 320 | 174 | 8 | 6 | 310 | 10 | 307 | 6.14e-53 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0874670 | A0A072U628 | 97.214 | 323 | 9 | 0 | 1 | 323 | 1 | 323 | 0.0 | 639 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0874670 | -0.852359 | 4.862631e-61 | -8.615850e-47 |
| Msa0030380 | Msa0874670 | 0.804411 | 2.188686e-49 | -8.615850e-47 |
| Msa0043730 | Msa0874670 | 0.801650 | 8.145175e-49 | -8.615850e-47 |
| Msa0094920 | Msa0874670 | 0.805647 | 1.206435e-49 | -8.615850e-47 |
| Msa0095380 | Msa0874670 | 0.823058 | 1.699299e-53 | -8.615850e-47 |
| Msa0120340 | Msa0874670 | 0.813274 | 2.780623e-51 | -8.615850e-47 |
| Msa0621590 | Msa0874670 | 0.800698 | 1.275529e-48 | -8.615850e-47 |
| Msa0630950 | Msa0874670 | 0.812972 | 3.239699e-51 | -8.615850e-47 |
| Msa0638280 | Msa0874670 | 0.819750 | 9.858569e-53 | -8.615850e-47 |
| Msa0638320 | Msa0874670 | 0.815256 | 1.014800e-51 | -8.615850e-47 |
| Msa0664960 | Msa0874670 | 0.801603 | 8.328899e-49 | -8.615850e-47 |
| Msa0669850 | Msa0874670 | 0.820848 | 5.523053e-53 | -8.615850e-47 |
| Msa0677270 | Msa0874670 | 0.814207 | 1.732552e-51 | -8.615850e-47 |
| Msa0711490 | Msa0874670 | 0.832379 | 9.776825e-56 | -8.615850e-47 |
| Msa0743260 | Msa0874670 | 0.803178 | 3.945323e-49 | -8.615850e-47 |
| Msa0743680 | Msa0874670 | 0.808862 | 2.513869e-50 | -8.615850e-47 |
| Msa0792090 | Msa0874670 | 0.827755 | 1.312820e-54 | -8.615850e-47 |
| Msa0137040 | Msa0874670 | 0.817004 | 4.129363e-52 | -8.615850e-47 |
| Msa0173740 | Msa0874670 | 0.802624 | 5.134814e-49 | -8.615850e-47 |
| Msa0178990 | Msa0874670 | 0.801779 | 7.663176e-49 | -8.615850e-47 |
| Msa0183590 | Msa0874670 | 0.801476 | 8.843436e-49 | -8.615850e-47 |
| Msa0223290 | Msa0874670 | 0.810004 | 1.429711e-50 | -8.615850e-47 |
| Msa0223380 | Msa0874670 | 0.814261 | 1.686099e-51 | -8.615850e-47 |
| Msa0377530 | Msa0874670 | 0.851510 | 8.469227e-61 | -8.615850e-47 |
| Msa0380040 | Msa0874670 | 0.812077 | 5.083644e-51 | -8.615850e-47 |
| Msa0393950 | Msa0874670 | 0.802175 | 6.355622e-49 | -8.615850e-47 |
| Msa0426810 | Msa0874670 | 0.818121 | 2.312931e-52 | -8.615850e-47 |
| Msa0429290 | Msa0874670 | 0.818012 | 2.447103e-52 | -8.615850e-47 |
| Msa0429950 | Msa0874670 | 0.809745 | 1.625845e-50 | -8.615850e-47 |
| Msa0431670 | Msa0874670 | 0.800155 | 1.645877e-48 | -8.615850e-47 |
| Msa0436190 | Msa0874670 | 0.810625 | 1.050230e-50 | -8.615850e-47 |
| Msa0469910 | Msa0874670 | -0.807966 | 3.903634e-50 | -8.615850e-47 |
| Msa0473240 | Msa0874670 | 0.828421 | 9.072932e-55 | -8.615850e-47 |
| Msa0475580 | Msa0874670 | 0.804690 | 1.914293e-49 | -8.615850e-47 |
| Msa0260210 | Msa0874670 | 0.802902 | 4.499542e-49 | -8.615850e-47 |
| Msa0304290 | Msa0874670 | 0.812783 | 3.562853e-51 | -8.615850e-47 |
| Msa0304330 | Msa0874670 | 0.813570 | 2.393515e-51 | -8.615850e-47 |
| Msa0305890 | Msa0874670 | 0.820878 | 5.434041e-53 | -8.615850e-47 |
| Msa0307830 | Msa0874670 | -0.803763 | 2.984467e-49 | -8.615850e-47 |
| Msa0340810 | Msa0874670 | 0.820035 | 8.484218e-53 | -8.615850e-47 |
| Msa0342100 | Msa0874670 | 0.854847 | 9.372347e-62 | -8.615850e-47 |
| Msa0344830 | Msa0874670 | 0.804493 | 2.103965e-49 | -8.615850e-47 |
| Msa0500720 | Msa0874670 | 0.816014 | 6.878939e-52 | -8.615850e-47 |
| Msa0517490 | Msa0874670 | 0.853689 | 2.023483e-61 | -8.615850e-47 |
| Msa0519220 | Msa0874670 | 0.811561 | 6.583407e-51 | -8.615850e-47 |
| Msa0534410 | Msa0874670 | 0.821237 | 4.492677e-53 | -8.615850e-47 |
| Msa0535030 | Msa0874670 | 0.804090 | 2.552277e-49 | -8.615850e-47 |
| Msa0535060 | Msa0874670 | 0.802281 | 6.043825e-49 | -8.615850e-47 |
| Msa0585900 | Msa0874670 | 0.812211 | 4.752460e-51 | -8.615850e-47 |
| Msa0588240 | Msa0874670 | 0.807078 | 6.025623e-50 | -8.615850e-47 |
| Msa0590650 | Msa0874670 | 0.812961 | 3.256981e-51 | -8.615850e-47 |
| Msa0591060 | Msa0874670 | 0.825298 | 5.059366e-54 | -8.615850e-47 |
| Msa0591770 | Msa0874670 | 0.809471 | 1.861615e-50 | -8.615850e-47 |
| Msa0598460 | Msa0874670 | 0.809059 | 2.281789e-50 | -8.615850e-47 |
| Msa0874670 | Msa0939790 | 0.909427 | 5.762449e-82 | -8.615850e-47 |
| Msa0874670 | Msa0945390 | 0.850489 | 1.643018e-60 | -8.615850e-47 |
| Msa0874670 | Msa0959010 | 0.813647 | 2.302134e-51 | -8.615850e-47 |
| Msa0874670 | Msa0993530 | 0.816501 | 5.352205e-52 | -8.615850e-47 |
| Msa0874670 | Msa1026760 | 0.824875 | 6.366858e-54 | -8.615850e-47 |
| Msa0874670 | Msa1026790 | 0.822956 | 1.794886e-53 | -8.615850e-47 |
| Msa0874670 | Msa1037700 | -0.805455 | 1.323731e-49 | -8.615850e-47 |
| Msa0874670 | Msa1089840 | 0.801757 | 7.745731e-49 | -8.615850e-47 |
| Msa0874670 | Msa1111700 | 0.816962 | 4.219923e-52 | -8.615850e-47 |
| Msa0874670 | Msa1127830 | 0.819129 | 1.365467e-52 | -8.615850e-47 |
| Msa0874670 | Msa1130210 | -0.840097 | 1.067281e-57 | -8.615850e-47 |
| Msa0874670 | Msa1217660 | 0.801208 | 1.003599e-48 | -8.615850e-47 |
| Msa0874670 | Msa1217830 | 0.811410 | 7.100461e-51 | -8.615850e-47 |
| Msa0874670 | Msa1233500 | 0.802015 | 6.856785e-49 | -8.615850e-47 |
| Msa0874670 | Msa1267840 | 0.806414 | 8.322773e-50 | -8.615850e-47 |
| Msa0874670 | Msa1269300 | 0.800880 | 1.170956e-48 | -8.615850e-47 |
| Msa0874670 | Msa1303160 | 0.813724 | 2.214159e-51 | -8.615850e-47 |
| Msa0874670 | Msa1306750 | 0.829161 | 6.010003e-55 | -8.615850e-47 |
| Msa0874670 | Msa1362510 | 0.812251 | 4.657319e-51 | -8.615850e-47 |
| Msa0874670 | Msa1369530 | 0.802976 | 4.343657e-49 | -8.615850e-47 |
| Msa0874670 | Msa1403580 | -0.803579 | 3.259552e-49 | -8.615850e-47 |
| Msa0874670 | Msa1443290 | -0.801067 | 1.072632e-48 | -8.615850e-47 |
| Msa0874670 | Msa1452470 | 0.822298 | 2.552463e-53 | -8.615850e-47 |
| Msa0874670 | Msa1454110 | 0.802494 | 5.464249e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0874670 | MtrunA17_Chr6g0455381 | 97.214 | 323 | 9 | 0 | 1 | 323 | 1 | 323 | 0.0 | 639 |
| Msa0874670 | MtrunA17_Chr7g0219891 | 79.739 | 306 | 62 | 0 | 5 | 310 | 9 | 314 | 0.0 | 514 |
| Msa0874670 | MtrunA17_Chr2g0293621 | 47.078 | 308 | 156 | 3 | 5 | 308 | 17 | 321 | 1.16e-103 | 306 |
| Msa0874670 | MtrunA17_Chr8g0343381 | 45.970 | 335 | 151 | 7 | 5 | 313 | 21 | 351 | 7.48e-91 | 275 |
| Msa0874670 | MtrunA17_Chr3g0136041 | 41.566 | 332 | 166 | 5 | 5 | 311 | 20 | 348 | 1.10e-80 | 249 |
| Msa0874670 | MtrunA17_Chr5g0431531 | 29.553 | 291 | 178 | 7 | 2 | 286 | 25 | 294 | 3.38e-31 | 119 |
| Msa0874670 | MtrunA17_Chr5g0431531 | 23.469 | 196 | 141 | 5 | 15 | 206 | 129 | 319 | 1.36e-11 | 64.7 |
| Msa0874670 | MtrunA17_Chr1g0201361 | 30.877 | 285 | 157 | 10 | 26 | 308 | 60 | 306 | 1.56e-29 | 114 |
| Msa0874670 | MtrunA17_Chr6g0463351 | 26.335 | 281 | 172 | 6 | 30 | 300 | 80 | 335 | 2.12e-27 | 110 |
| Msa0874670 | MtrunA17_Chr6g0463351 | 29.310 | 174 | 105 | 4 | 130 | 303 | 79 | 234 | 4.54e-12 | 66.2 |
| Msa0874670 | MtrunA17_Chr6g0463351 | 26.437 | 174 | 113 | 4 | 31 | 198 | 174 | 338 | 1.66e-11 | 64.7 |
| Msa0874670 | MtrunA17_Chr3g0137941 | 29.831 | 295 | 179 | 9 | 21 | 311 | 128 | 398 | 7.38e-25 | 103 |
| Msa0874670 | MtrunA17_Chr3g0137941 | 25.654 | 191 | 135 | 3 | 18 | 208 | 217 | 400 | 4.81e-13 | 69.3 |
| Msa0874670 | MtrunA17_Chr8g0386871 | 28.571 | 280 | 172 | 6 | 27 | 303 | 330 | 584 | 1.16e-24 | 104 |
| Msa0874670 | MtrunA17_Chr8g0386871 | 29.444 | 180 | 114 | 5 | 17 | 194 | 412 | 580 | 2.66e-13 | 70.5 |
| Msa0874670 | MtrunA17_Chr8g0383321 | 30.035 | 283 | 160 | 9 | 27 | 308 | 62 | 307 | 1.21e-22 | 96.3 |
| Msa0874670 | MtrunA17_Chr1g0149111 | 28.720 | 289 | 178 | 9 | 21 | 305 | 145 | 409 | 5.37e-21 | 92.8 |
| Msa0874670 | MtrunA17_Chr1g0149111 | 26.087 | 184 | 129 | 3 | 18 | 201 | 234 | 410 | 9.10e-13 | 68.6 |
| Msa0874670 | MtrunA17_Chr4g0004571 | 25.000 | 292 | 194 | 11 | 32 | 317 | 31 | 303 | 1.96e-19 | 87.0 |
| Msa0874670 | MtrunA17_Chr4g0063561 | 25.589 | 297 | 187 | 11 | 21 | 310 | 129 | 398 | 2.37e-19 | 87.8 |
| Msa0874670 | MtrunA17_Chr7g0269701 | 30.159 | 189 | 113 | 4 | 33 | 212 | 139 | 317 | 1.50e-17 | 82.0 |
| Msa0874670 | MtrunA17_Chr7g0269701 | 23.944 | 284 | 189 | 11 | 33 | 305 | 38 | 305 | 3.51e-15 | 75.1 |
| Msa0874670 | MtrunA17_Chr2g0331771 | 25.172 | 290 | 188 | 8 | 21 | 304 | 165 | 431 | 4.31e-17 | 81.6 |
| Msa0874670 | MtrunA17_Chr3g0131501 | 24.918 | 305 | 207 | 7 | 4 | 304 | 192 | 478 | 8.05e-17 | 80.9 |
| Msa0874670 | MtrunA17_Chr3g0086811 | 24.837 | 306 | 180 | 9 | 31 | 304 | 42 | 329 | 1.57e-16 | 79.3 |
| Msa0874670 | MtrunA17_Chr8g0347451 | 24.161 | 298 | 195 | 5 | 30 | 305 | 64 | 352 | 1.73e-16 | 79.3 |
| Msa0874670 | MtrunA17_Chr5g0423111 | 30.348 | 201 | 110 | 7 | 33 | 220 | 135 | 318 | 3.28e-16 | 78.6 |
| Msa0874670 | MtrunA17_Chr5g0423111 | 24.561 | 285 | 192 | 8 | 33 | 308 | 37 | 307 | 3.78e-15 | 75.5 |
| Msa0874670 | MtrunA17_Chr5g0396801 | 25.418 | 299 | 184 | 8 | 30 | 303 | 51 | 335 | 4.16e-16 | 78.2 |
| Msa0874670 | MtrunA17_Chr7g0240341 | 23.154 | 298 | 201 | 5 | 21 | 305 | 31 | 313 | 5.86e-16 | 77.4 |
| Msa0874670 | MtrunA17_Chr4g0028531 | 27.273 | 297 | 175 | 14 | 30 | 305 | 35 | 311 | 6.21e-16 | 77.0 |
| Msa0874670 | MtrunA17_Chr1g0195101 | 28.729 | 181 | 122 | 2 | 33 | 210 | 136 | 312 | 1.82e-15 | 75.9 |
| Msa0874670 | MtrunA17_Chr1g0195101 | 23.264 | 288 | 186 | 11 | 33 | 305 | 35 | 302 | 1.99e-12 | 67.0 |
| Msa0874670 | MtrunA17_Chr2g0296061 | 22.635 | 296 | 193 | 7 | 33 | 300 | 31 | 318 | 2.53e-15 | 75.5 |
| Msa0874670 | MtrunA17_Chr2g0296061 | 25.592 | 211 | 135 | 5 | 109 | 304 | 4 | 207 | 2.16e-11 | 63.9 |
| Msa0874670 | MtrunA17_Chr1g0200171 | 24.161 | 298 | 189 | 8 | 19 | 312 | 526 | 790 | 2.80e-15 | 76.6 |
| Msa0874670 | MtrunA17_Chr4g0008061 | 24.221 | 289 | 188 | 7 | 29 | 305 | 27 | 296 | 5.47e-15 | 74.3 |
| Msa0874670 | MtrunA17_Chr7g0241521 | 23.986 | 296 | 194 | 7 | 29 | 312 | 29 | 305 | 6.75e-15 | 73.9 |
| Msa0874670 | MtrunA17_Chr7g0252401 | 30.102 | 196 | 119 | 5 | 115 | 308 | 208 | 387 | 1.91e-14 | 73.9 |
| Msa0874670 | MtrunA17_Chr7g0252401 | 28.977 | 176 | 107 | 5 | 31 | 201 | 317 | 479 | 6.71e-14 | 72.0 |
| Msa0874670 | MtrunA17_Chr7g0252401 | 22.896 | 297 | 195 | 10 | 17 | 304 | 206 | 477 | 1.36e-13 | 71.2 |
| Msa0874670 | MtrunA17_Chr7g0242311 | 25.862 | 290 | 177 | 11 | 33 | 313 | 103 | 363 | 2.36e-14 | 73.2 |
| Msa0874670 | MtrunA17_Chr4g0067231 | 21.284 | 296 | 199 | 5 | 33 | 300 | 30 | 319 | 2.61e-14 | 72.8 |
| Msa0874670 | MtrunA17_Chr4g0067231 | 25.214 | 234 | 148 | 6 | 101 | 318 | 1 | 223 | 1.40e-11 | 64.7 |
| Msa0874670 | MtrunA17_Chr4g0067231 | 26.000 | 200 | 136 | 3 | 7 | 194 | 119 | 318 | 2.91e-11 | 63.5 |
| Msa0874670 | MtrunA17_Chr1g0196921 | 21.918 | 292 | 186 | 10 | 32 | 305 | 29 | 296 | 2.67e-14 | 72.4 |
| Msa0874670 | MtrunA17_Chr8g0385571 | 27.429 | 175 | 120 | 4 | 29 | 201 | 333 | 502 | 2.76e-14 | 73.6 |
| Msa0874670 | MtrunA17_Chr8g0385571 | 22.654 | 309 | 209 | 9 | 4 | 304 | 214 | 500 | 4.87e-14 | 72.8 |
| Msa0874670 | MtrunA17_Chr8g0385571 | 29.082 | 196 | 119 | 6 | 115 | 308 | 228 | 405 | 3.04e-11 | 64.3 |
| Msa0874670 | MtrunA17_Chr8g0372531 | 24.390 | 287 | 197 | 7 | 31 | 306 | 28 | 305 | 8.59e-14 | 70.9 |
| Msa0874670 | MtrunA17_Chr4g0006851 | 27.875 | 287 | 175 | 11 | 33 | 313 | 105 | 365 | 8.85e-14 | 71.2 |
| Msa0874670 | MtrunA17_Chr6g0488081 | 25.723 | 311 | 188 | 12 | 21 | 310 | 25 | 313 | 3.98e-13 | 68.9 |
| Msa0874670 | MtrunA17_Chr8g0366791 | 25.704 | 284 | 180 | 9 | 32 | 300 | 24 | 291 | 6.29e-13 | 68.2 |
| Msa0874670 | MtrunA17_Chr8g0366791 | 28.191 | 188 | 119 | 5 | 17 | 194 | 109 | 290 | 4.99e-12 | 65.5 |
| Msa0874670 | MtrunA17_Chr5g0411411 | 24.912 | 285 | 181 | 11 | 32 | 300 | 24 | 291 | 6.66e-13 | 68.2 |
| Msa0874670 | MtrunA17_Chr5g0411411 | 29.004 | 231 | 133 | 7 | 107 | 321 | 2 | 217 | 2.63e-11 | 63.5 |
| Msa0874670 | MtrunA17_Chr4g0000261 | 26.347 | 167 | 115 | 4 | 28 | 194 | 188 | 346 | 5.19e-12 | 65.9 |
| Msa0874670 | MtrunA17_Chr4g0046981 | 24.823 | 282 | 175 | 11 | 21 | 283 | 14 | 277 | 7.93e-12 | 65.1 |
| Msa0874670 | MtrunA17_Chr3g0135801 | 24.084 | 191 | 129 | 4 | 17 | 201 | 141 | 321 | 2.29e-11 | 63.9 |
| Msa0874670 | MtrunA17_Chr3g0135861 | 27.972 | 143 | 91 | 3 | 56 | 194 | 188 | 322 | 9.74e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0874670 | AT5G15640.1 | 75.649 | 308 | 73 | 2 | 5 | 310 | 16 | 323 | 4.49e-172 | 480 |
| Msa0874670 | AT5G15640.2 | 75.244 | 307 | 73 | 3 | 6 | 310 | 11 | 316 | 8.66e-168 | 469 |
| Msa0874670 | AT1G72820.1 | 45.509 | 334 | 158 | 5 | 5 | 317 | 19 | 349 | 3.74e-94 | 283 |
| Msa0874670 | AT1G72820.2 | 45.509 | 334 | 158 | 5 | 5 | 317 | 19 | 349 | 3.74e-94 | 283 |
| Msa0874670 | AT5G26200.1 | 44.272 | 323 | 157 | 6 | 5 | 311 | 27 | 342 | 1.21e-87 | 266 |
| Msa0874670 | AT1G07030.1 | 29.066 | 289 | 180 | 6 | 4 | 286 | 27 | 296 | 6.64e-31 | 119 |
| Msa0874670 | AT1G07030.1 | 24.084 | 191 | 137 | 5 | 21 | 207 | 136 | 322 | 5.56e-11 | 63.2 |
| Msa0874670 | AT2G30160.1 | 28.671 | 286 | 176 | 6 | 29 | 305 | 54 | 320 | 1.60e-27 | 110 |
| Msa0874670 | AT2G30160.1 | 24.194 | 186 | 134 | 4 | 21 | 201 | 138 | 321 | 4.17e-11 | 63.5 |
| Msa0874670 | AT1G34065.2 | 30.769 | 286 | 160 | 10 | 27 | 311 | 85 | 333 | 6.14e-27 | 108 |
| Msa0874670 | AT1G34065.1 | 30.769 | 286 | 160 | 10 | 27 | 311 | 92 | 340 | 8.30e-27 | 108 |
| Msa0874670 | AT4G39460.2 | 29.329 | 283 | 162 | 9 | 27 | 308 | 68 | 313 | 3.20e-24 | 100 |
| Msa0874670 | AT4G39460.1 | 29.329 | 283 | 162 | 9 | 27 | 308 | 68 | 313 | 3.20e-24 | 100 |
| Msa0874670 | AT4G39460.3 | 29.329 | 283 | 162 | 9 | 27 | 308 | 68 | 313 | 3.20e-24 | 100 |
| Msa0874670 | AT4G11440.1 | 26.144 | 306 | 204 | 7 | 1 | 303 | 314 | 600 | 9.88e-23 | 99.4 |
| Msa0874670 | AT4G11440.2 | 26.144 | 306 | 204 | 7 | 1 | 303 | 314 | 600 | 9.88e-23 | 99.4 |
| Msa0874670 | AT5G42130.1 | 27.215 | 316 | 185 | 10 | 8 | 304 | 111 | 400 | 1.29e-21 | 95.1 |
| Msa0874670 | AT2G37890.1 | 27.273 | 253 | 163 | 7 | 60 | 305 | 93 | 331 | 2.52e-21 | 93.2 |
| Msa0874670 | AT2G37890.1 | 27.011 | 174 | 119 | 4 | 30 | 201 | 165 | 332 | 8.57e-13 | 68.6 |
| Msa0874670 | AT3G53940.1 | 26.087 | 253 | 166 | 5 | 60 | 305 | 121 | 359 | 1.49e-18 | 85.9 |
| Msa0874670 | AT3G53940.1 | 29.730 | 148 | 96 | 4 | 30 | 175 | 193 | 334 | 9.02e-14 | 71.6 |
| Msa0874670 | AT4G01100.3 | 25.253 | 297 | 189 | 6 | 30 | 303 | 5 | 291 | 2.58e-18 | 84.3 |
| Msa0874670 | AT4G01100.1 | 25.617 | 324 | 206 | 7 | 3 | 303 | 30 | 341 | 2.59e-18 | 84.7 |
| Msa0874670 | AT5G51050.1 | 25.974 | 308 | 197 | 9 | 4 | 304 | 210 | 493 | 3.48e-18 | 85.5 |
| Msa0874670 | AT5G51050.1 | 28.718 | 195 | 117 | 6 | 115 | 305 | 224 | 400 | 2.74e-11 | 64.7 |
| Msa0874670 | AT5G01340.1 | 27.206 | 272 | 167 | 9 | 29 | 288 | 29 | 281 | 5.06e-18 | 83.6 |
| Msa0874670 | AT3G55640.1 | 26.910 | 301 | 191 | 10 | 21 | 309 | 44 | 327 | 8.15e-18 | 83.2 |
| Msa0874670 | AT3G55640.4 | 26.910 | 301 | 191 | 10 | 21 | 309 | 44 | 327 | 8.15e-18 | 83.2 |
| Msa0874670 | AT4G32400.1 | 25.510 | 294 | 193 | 8 | 21 | 311 | 120 | 390 | 2.14e-17 | 82.4 |
| Msa0874670 | AT3G54110.1 | 25.436 | 287 | 185 | 6 | 29 | 304 | 27 | 295 | 3.24e-17 | 81.3 |
| Msa0874670 | AT5G46800.2 | 28.767 | 292 | 170 | 10 | 32 | 303 | 23 | 296 | 3.67e-17 | 80.9 |
| Msa0874670 | AT5G46800.2 | 30.918 | 207 | 113 | 6 | 134 | 321 | 24 | 219 | 1.56e-15 | 76.3 |
| Msa0874670 | AT5G46800.2 | 25.258 | 194 | 120 | 6 | 17 | 194 | 108 | 292 | 5.74e-12 | 65.9 |
| Msa0874670 | AT5G46800.3 | 28.767 | 292 | 170 | 10 | 32 | 303 | 23 | 296 | 3.67e-17 | 80.9 |
| Msa0874670 | AT5G46800.3 | 30.918 | 207 | 113 | 6 | 134 | 321 | 24 | 219 | 1.56e-15 | 76.3 |
| Msa0874670 | AT5G46800.3 | 25.258 | 194 | 120 | 6 | 17 | 194 | 108 | 292 | 5.74e-12 | 65.9 |
| Msa0874670 | AT5G46800.1 | 28.767 | 292 | 170 | 10 | 32 | 303 | 23 | 296 | 3.67e-17 | 80.9 |
| Msa0874670 | AT5G46800.1 | 30.918 | 207 | 113 | 6 | 134 | 321 | 24 | 219 | 1.56e-15 | 76.3 |
| Msa0874670 | AT5G46800.1 | 25.258 | 194 | 120 | 6 | 17 | 194 | 108 | 292 | 5.74e-12 | 65.9 |
| Msa0874670 | AT2G26360.1 | 25.362 | 276 | 174 | 7 | 31 | 304 | 129 | 374 | 8.36e-17 | 80.9 |
| Msa0874670 | AT2G35800.1 | 24.407 | 295 | 193 | 6 | 19 | 312 | 546 | 811 | 8.60e-17 | 81.6 |
| Msa0874670 | AT1G79900.1 | 24.638 | 276 | 172 | 11 | 32 | 300 | 31 | 277 | 1.15e-16 | 79.3 |
| Msa0874670 | AT4G01100.2 | 25.588 | 340 | 200 | 10 | 3 | 303 | 30 | 355 | 1.70e-16 | 79.7 |
| Msa0874670 | AT1G14140.1 | 24.221 | 289 | 184 | 9 | 32 | 305 | 31 | 299 | 7.32e-16 | 77.4 |
| Msa0874670 | AT3G51870.1 | 27.055 | 292 | 179 | 10 | 33 | 317 | 107 | 371 | 3.16e-15 | 76.3 |
| Msa0874670 | AT2G47490.1 | 25.524 | 286 | 181 | 9 | 33 | 305 | 33 | 299 | 4.33e-15 | 75.1 |
| Msa0874670 | AT2G47490.1 | 25.000 | 192 | 125 | 4 | 29 | 211 | 129 | 310 | 1.55e-12 | 67.8 |
| Msa0874670 | AT5G66380.1 | 26.263 | 297 | 197 | 10 | 24 | 309 | 18 | 303 | 1.70e-14 | 73.2 |
| Msa0874670 | AT5G07320.1 | 22.939 | 279 | 189 | 8 | 33 | 309 | 225 | 479 | 1.93e-14 | 74.3 |
| Msa0874670 | AT5G61810.2 | 26.299 | 308 | 183 | 12 | 13 | 309 | 61 | 335 | 2.30e-14 | 73.2 |
| Msa0874670 | AT3G20240.1 | 26.131 | 199 | 135 | 5 | 3 | 201 | 153 | 339 | 2.49e-14 | 73.2 |
| Msa0874670 | AT3G20240.1 | 26.493 | 268 | 163 | 10 | 31 | 282 | 66 | 315 | 3.19e-11 | 63.9 |
| Msa0874670 | AT5G61810.1 | 26.299 | 308 | 183 | 12 | 13 | 309 | 204 | 478 | 4.33e-14 | 73.2 |
| Msa0874670 | AT1G74240.1 | 24.333 | 300 | 184 | 9 | 31 | 303 | 50 | 333 | 5.57e-14 | 72.4 |
| Msa0874670 | AT1G74240.2 | 24.333 | 300 | 184 | 9 | 31 | 303 | 2 | 285 | 5.64e-14 | 72.0 |
| Msa0874670 | AT4G26180.2 | 22.662 | 278 | 176 | 6 | 30 | 288 | 34 | 291 | 1.16e-13 | 70.9 |
| Msa0874670 | AT4G26180.2 | 28.641 | 206 | 120 | 7 | 120 | 311 | 24 | 216 | 2.95e-12 | 66.6 |
| Msa0874670 | AT1G25380.1 | 29.756 | 205 | 123 | 6 | 28 | 218 | 132 | 329 | 1.92e-13 | 70.9 |
| Msa0874670 | AT1G25380.1 | 22.456 | 285 | 193 | 7 | 33 | 305 | 37 | 305 | 4.11e-13 | 69.7 |
| Msa0874670 | AT1G25380.2 | 29.756 | 205 | 123 | 6 | 28 | 218 | 132 | 329 | 1.92e-13 | 70.9 |
| Msa0874670 | AT1G25380.2 | 22.456 | 285 | 193 | 7 | 33 | 305 | 37 | 305 | 4.11e-13 | 69.7 |
| Msa0874670 | AT5G48970.1 | 24.127 | 315 | 195 | 9 | 19 | 301 | 27 | 329 | 2.04e-13 | 70.5 |
| Msa0874670 | AT4G26180.1 | 23.247 | 271 | 169 | 6 | 30 | 281 | 34 | 284 | 2.07e-13 | 70.5 |
| Msa0874670 | AT4G26180.1 | 28.641 | 206 | 120 | 7 | 120 | 311 | 24 | 216 | 2.81e-12 | 67.0 |
| Msa0874670 | AT2G33820.4 | 26.396 | 197 | 119 | 5 | 119 | 303 | 19 | 201 | 2.40e-13 | 69.7 |
| Msa0874670 | AT2G33820.1 | 26.396 | 197 | 119 | 5 | 119 | 303 | 19 | 201 | 2.55e-13 | 70.1 |
| Msa0874670 | AT2G33820.1 | 24.430 | 307 | 199 | 10 | 15 | 305 | 16 | 305 | 4.52e-11 | 63.2 |
| Msa0874670 | AT4G03115.3 | 26.667 | 225 | 118 | 6 | 118 | 322 | 71 | 268 | 2.76e-13 | 70.1 |
| Msa0874670 | AT4G03115.1 | 26.667 | 225 | 118 | 6 | 118 | 322 | 39 | 236 | 3.16e-13 | 69.7 |
| Msa0874670 | AT5G56450.1 | 27.083 | 192 | 122 | 6 | 17 | 201 | 145 | 325 | 5.34e-13 | 69.3 |
| Msa0874670 | AT5G48970.2 | 22.963 | 270 | 165 | 8 | 58 | 301 | 6 | 258 | 1.82e-12 | 67.0 |
| Msa0874670 | AT5G58970.1 | 23.311 | 296 | 182 | 11 | 33 | 309 | 32 | 301 | 1.83e-12 | 67.4 |
| Msa0874670 | AT3G21390.1 | 22.635 | 296 | 195 | 7 | 33 | 300 | 35 | 324 | 1.11e-11 | 65.5 |
| Msa0874670 | AT3G21390.2 | 22.635 | 296 | 195 | 7 | 33 | 300 | 57 | 346 | 1.69e-11 | 64.7 |
| Msa0874670 | AT5G01500.1 | 25.517 | 290 | 174 | 11 | 33 | 311 | 135 | 393 | 2.61e-11 | 64.7 |
Find 100 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTTCCCTATGATAATTA+AGG | 0.127947 | 6_1:-10468156 | None:intergenic |
| GAAACTCAATTTACATAGTT+TGG | 0.162384 | 6_1:+10462919 | None:intergenic |
| TACCTGTCCCAGTTGATTTC+GGG | 0.231208 | 6_1:+10468034 | None:intergenic |
| GGCATTCGTGGTTTGTATAA+AGG | 0.257870 | 6_1:-10466438 | Msa0874670:CDS |
| GTAGTTTCAGATAGTTTAAA+TGG | 0.289394 | 6_1:+10466321 | None:intergenic |
| TTTGTGGGATGAGTTGATTT+TGG | 0.293978 | 6_1:-10462895 | Msa0874670:three_prime_UTR |
| ATACCTGTCCCAGTTGATTT+CGG | 0.301520 | 6_1:+10468033 | None:intergenic |
| TTAGACAATTATCTTGGATT+AGG | 0.301617 | 6_1:-10462684 | Msa0874670:three_prime_UTR |
| TAGTCTGCCAAAGATTGTTT+TGG | 0.312137 | 6_1:-10464351 | Msa0874670:CDS |
| ACCCTTGCACCATCAACTTT+TGG | 0.312637 | 6_1:+10465278 | None:intergenic |
| ATGGGGTACTTCAATGATAT+TGG | 0.313800 | 6_1:-10463544 | Msa0874670:CDS |
| AGGAGTACCTTTCTCAGATT+TGG | 0.314142 | 6_1:+10464373 | None:intergenic |
| GCCTGAACCAAAACAATCTT+TGG | 0.320437 | 6_1:+10464344 | None:intergenic |
| AAAGGTTTATATAGAGGATT+AGG | 0.325908 | 6_1:-10463591 | Msa0874670:CDS |
| GCTCAAGTCAACGCTTCTTA+TGG | 0.333157 | 6_1:-10465111 | Msa0874670:CDS |
| CTCTTCCCTATGATAATTAA+GGG | 0.338101 | 6_1:-10468155 | None:intergenic |
| AAACTCAATTTACATAGTTT+GGG | 0.343066 | 6_1:+10462920 | None:intergenic |
| TCAGATTAGCCAAAAGTTGA+TGG | 0.349779 | 6_1:-10465287 | Msa0874670:intron |
| TGGCTGCTCCCGAAATCAAC+TGG | 0.354331 | 6_1:-10468042 | Msa0874670:CDS |
| GCATTCGTGGTTTGTATAAA+GGG | 0.363110 | 6_1:-10466437 | Msa0874670:CDS |
| GATGTGGGATGAGTTGATTT+TGG | 0.365754 | 6_1:-10462873 | Msa0874670:three_prime_UTR |
| AATTAACCCATAACAATGTT+AGG | 0.366683 | 6_1:+10462650 | None:intergenic |
| TACAATCAAGACTCGGTTAC+AGG | 0.372914 | 6_1:-10464267 | Msa0874670:intron |
| TCAACTGATTAGCCAAGATA+TGG | 0.373942 | 6_1:-10462944 | Msa0874670:exon |
| CATAGTTTGGGACCATATCT+TGG | 0.375572 | 6_1:+10462932 | None:intergenic |
| GCTGACATGCTGACAAATCT+TGG | 0.376196 | 6_1:+10463567 | None:intergenic |
| TGATAAGGTCTGAGGGAATC+CGG | 0.376535 | 6_1:-10465207 | Msa0874670:CDS |
| AATTATCGTACCACGTCAAT+TGG | 0.383684 | 6_1:+10466231 | None:intergenic |
| AAATCCAATGTTCAAGTTGT+AGG | 0.385322 | 6_1:+10462820 | None:intergenic |
| CGTGGTTTGTATAAAGGGTT+TGG | 0.386999 | 6_1:-10466432 | Msa0874670:CDS |
| GGCAGTGAGAAATATGATTC+TGG | 0.390248 | 6_1:+10466383 | None:intergenic |
| TGGGTTAATTATTGTACAAT+GGG | 0.393887 | 6_1:-10462637 | Msa0874670:three_prime_UTR |
| TGCTCCTACAACTTGAACAT+TGG | 0.400067 | 6_1:-10462824 | Msa0874670:three_prime_UTR |
| ATTCACCATCTAGCGCTGTT+TGG | 0.406563 | 6_1:-10465147 | Msa0874670:CDS |
| CACCATCTAGCGCTGTTTGG+TGG | 0.425293 | 6_1:-10465144 | Msa0874670:CDS |
| TAAAACAAAATTCTATGTAG+TGG | 0.425595 | 6_1:-10466595 | Msa0874670:CDS |
| TCAGGAAATAATCATTGGAT+TGG | 0.432268 | 6_1:-10462757 | Msa0874670:three_prime_UTR |
| GGTTGGAAAGGTTTATATAG+AGG | 0.447603 | 6_1:-10463597 | Msa0874670:CDS |
| GATAAGGTCTGAGGGAATCC+GGG | 0.449548 | 6_1:-10465206 | Msa0874670:CDS |
| GAAGCGTTTGGTCAGCAATC+TGG | 0.451010 | 6_1:-10462974 | Msa0874670:CDS |
| GCCCACCAAACAGCGCTAGA+TGG | 0.463527 | 6_1:+10465142 | None:intergenic |
| ATGGGTTAATTATTGTACAA+TGG | 0.465694 | 6_1:-10462638 | Msa0874670:three_prime_UTR |
| CTCAAGACAGATGGCATTCG+TGG | 0.467371 | 6_1:-10466450 | Msa0874670:CDS |
| CTAGTCTTCACAACAGAGAC+AGG | 0.467783 | 6_1:+10466534 | None:intergenic |
| ATGTTGCTCGTAAGTTGATA+AGG | 0.474358 | 6_1:-10465222 | Msa0874670:CDS |
| AATTGATCAGTGAGGATGGT+TGG | 0.475537 | 6_1:-10463614 | Msa0874670:CDS |
| GGCAGGAATTGCTCCGGTGA+CGG | 0.476552 | 6_1:+10466404 | None:intergenic |
| AAATGGTTCAAGCATCTTGA+AGG | 0.482454 | 6_1:+10466338 | None:intergenic |
| AAATTCTATGTAGTGGGAGC+TGG | 0.484600 | 6_1:-10466588 | Msa0874670:CDS |
| CTCCCGAAATCAACTGGGAC+AGG | 0.489215 | 6_1:-10468036 | Msa0874670:intron |
| ATCAGTGAGGATGGTTGGAA+AGG | 0.492374 | 6_1:-10463609 | Msa0874670:CDS |
| TCAGGCCATGCCCAATATAG+TGG | 0.508347 | 6_1:-10465253 | Msa0874670:CDS |
| GATTTGTCAGCATGTCAGCA+TGG | 0.509157 | 6_1:-10463563 | Msa0874670:CDS |
| GCTGTTTGGTGGGCAAGTTA+CGG | 0.509649 | 6_1:-10465133 | Msa0874670:CDS |
| CTGTCTCTGTTGTGAAGACT+AGG | 0.510659 | 6_1:-10466533 | Msa0874670:CDS |
| GCAAAAGATGAAGAAGCGTT+TGG | 0.511322 | 6_1:-10462986 | Msa0874670:CDS |
| GGGTTTGGCACTGCCGTCAC+CGG | 0.512242 | 6_1:-10466417 | Msa0874670:CDS |
| ACCATCTAGCGCTGTTTGGT+GGG | 0.512623 | 6_1:-10465143 | Msa0874670:CDS |
| AAAACAATCTTTGGCAGACT+AGG | 0.516654 | 6_1:+10464353 | None:intergenic |
| GTGATGGGACATGGAAAGAA+AGG | 0.519328 | 6_1:-10463660 | Msa0874670:CDS |
| ATTTGTCAGCATGTCAGCAT+GGG | 0.524386 | 6_1:-10463562 | Msa0874670:CDS |
| GGCTGCTCCCGAAATCAACT+GGG | 0.527795 | 6_1:-10468041 | Msa0874670:CDS |
| AGCCAAAAGTTGATGGTGCA+AGG | 0.530699 | 6_1:-10465280 | Msa0874670:CDS |
| GCCATAGCGAATGGCATTGG+TGG | 0.530848 | 6_1:-10466291 | Msa0874670:CDS |
| AAAACAAAATTCTATGTAGT+GGG | 0.534149 | 6_1:-10466594 | Msa0874670:CDS |
| TTGATGGTGCAAGGGTACTC+AGG | 0.535278 | 6_1:-10465271 | Msa0874670:CDS |
| CGAGTCTTGATTGTATCCAA+TGG | 0.544870 | 6_1:+10464275 | None:intergenic |
| TGCCTTAGAGACCACAAAAG+TGG | 0.546512 | 6_1:-10466364 | Msa0874670:CDS |
| GCCACCAATGCCATTCGCTA+TGG | 0.548089 | 6_1:+10466290 | None:intergenic |
| GCACCACAGGTGATGGGACA+TGG | 0.548711 | 6_1:-10463669 | Msa0874670:intron |
| GCTGCCATAGCGAATGGCAT+TGG | 0.561150 | 6_1:-10466294 | Msa0874670:CDS |
| GTGAGAAATATGATTCTGGC+AGG | 0.562074 | 6_1:+10466387 | None:intergenic |
| TGTTGTGAAGACTAGGATGC+AGG | 0.567417 | 6_1:-10466526 | Msa0874670:CDS |
| CAGGCCATGCCCAATATAGT+GGG | 0.571964 | 6_1:-10465252 | Msa0874670:CDS |
| TTGCTTGCACCACAGGTGAT+GGG | 0.584312 | 6_1:-10463675 | Msa0874670:intron |
| GATTCTGGCAGGAATTGCTC+CGG | 0.586094 | 6_1:+10466398 | None:intergenic |
| ATCGTGCATTACAACTCCAT+TGG | 0.587880 | 6_1:-10464291 | Msa0874670:CDS |
| GTTAATTATTGTACAATGGG+AGG | 0.588794 | 6_1:-10462634 | Msa0874670:three_prime_UTR |
| CAAGTCAACGCTTCTTATGG+AGG | 0.592490 | 6_1:-10465108 | Msa0874670:intron |
| GCCAAAAGTTGATGGTGCAA+GGG | 0.597627 | 6_1:-10465279 | Msa0874670:CDS |
| AGTGCATTGTCTGTTGTGAA+AGG | 0.598153 | 6_1:-10466477 | Msa0874670:CDS |
| GATGACGCCAAATCTGAGAA+AGG | 0.599009 | 6_1:-10464380 | Msa0874670:CDS |
| TCGTAAGTTGATAAGGTCTG+AGG | 0.600329 | 6_1:-10465215 | Msa0874670:CDS |
| AAAGAATTGATCAGTGAGGA+TGG | 0.605272 | 6_1:-10463618 | Msa0874670:CDS |
| CGTAAGTTGATAAGGTCTGA+GGG | 0.606397 | 6_1:-10465214 | Msa0874670:CDS |
| ATAAGGTCTGAGGGAATCCG+GGG | 0.614856 | 6_1:-10465205 | Msa0874670:CDS |
| CAAACCCTCGGTATAACCCC+CGG | 0.615429 | 6_1:+10465188 | None:intergenic |
| AAAGGATTACTCAAGACAGA+TGG | 0.621271 | 6_1:-10466459 | Msa0874670:CDS |
| TAAACTATCTGAAACTACAC+AGG | 0.624945 | 6_1:-10466316 | Msa0874670:CDS |
| ACACAGGCTGCCATAGCGAA+TGG | 0.640012 | 6_1:-10466300 | Msa0874670:CDS |
| CATTGGATACAATCAAGACT+CGG | 0.643386 | 6_1:-10464274 | Msa0874670:CDS |
| TGACAGATAAACCAAACCCT+CGG | 0.648443 | 6_1:+10465176 | None:intergenic |
| GGCCATGCCCAATATAGTGG+GGG | 0.648455 | 6_1:-10465250 | Msa0874670:CDS |
| AGGCCATGCCCAATATAGTG+GGG | 0.649235 | 6_1:-10465251 | Msa0874670:CDS |
| TGTTAAAGAATTGATCAGTG+AGG | 0.667195 | 6_1:-10463622 | Msa0874670:CDS |
| TTTGTCAGCATGTCAGCATG+GGG | 0.695351 | 6_1:-10463561 | Msa0874670:CDS |
| TGTGTTTGTTCCAATTGACG+TGG | 0.709166 | 6_1:-10466241 | Msa0874670:intron |
| TAGTCTTCACAACAGAGACA+GGG | 0.714360 | 6_1:+10466535 | None:intergenic |
| TAAGGTCTGAGGGAATCCGG+GGG | 0.742890 | 6_1:-10465204 | Msa0874670:CDS |
| GGTTGCTTCAAACCATACTG+CGG | 0.743023 | 6_1:-10466505 | Msa0874670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATAACTATTTGATAA+TGG | - | chr6_1:10462950-10462969 | Msa0874670:exon | 10.0% |
| !!! | TATCTACTTTTTTTTTTTTT+TGG | + | chr6_1:10463216-10463235 | None:intergenic | 10.0% |
| !! | TATAAGAATACAATAAAAAA+GGG | + | chr6_1:10463965-10463984 | None:intergenic | 10.0% |
| !! | ATATAAGAATACAATAAAAA+AGG | + | chr6_1:10463966-10463985 | None:intergenic | 10.0% |
| !! | GAAAGTTAAAAAAAAAAAAT+TGG | - | chr6_1:10464552-10464571 | Msa0874670:intron | 10.0% |
| !!! | CTTTTTAAAAAAAGAATATT+TGG | - | chr6_1:10465221-10465240 | Msa0874670:CDS | 10.0% |
| !! | AAAAAAAAAAAAAGTTGAAA+AGG | + | chr6_1:10466214-10466233 | None:intergenic | 10.0% |
| !!! | ATATTTTACTAATAATGATT+TGG | - | chr6_1:10466517-10466536 | Msa0874670:CDS | 10.0% |
| !!! | ATTTGATAATGGTTATTATA+AGG | - | chr6_1:10462961-10462980 | Msa0874670:CDS | 15.0% |
| !!! | ATTTTACTATTTTGAGAATA+TGG | - | chr6_1:10463313-10463332 | Msa0874670:intron | 15.0% |
| !! | AAGAATACATAAAAAAAGAA+GGG | + | chr6_1:10463752-10463771 | None:intergenic | 15.0% |
| !! | TAAGAATACATAAAAAAAGA+AGG | + | chr6_1:10463753-10463772 | None:intergenic | 15.0% |
| !! | AATATGACATTAAATTCATA+TGG | + | chr6_1:10465330-10465349 | None:intergenic | 15.0% |
| !! | AATGAATAAGTATTCAATTT+AGG | - | chr6_1:10465665-10465684 | Msa0874670:intron | 15.0% |
| !!! | CTCTTTTTTGAAATAAATTA+AGG | - | chr6_1:10466903-10466922 | Msa0874670:intron | 15.0% |
| !!! | GAAAATAATATTTTTCCAAT+AGG | + | chr6_1:10468024-10468043 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAGACAATTATCT+TGG | - | chr6_1:10468044-10468063 | Msa0874670:CDS | 15.0% |
| !! | ATTAAAAATGTAGTGATTAG+TGG | - | chr6_1:10462927-10462946 | Msa0874670:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTTGGTAGATAGAT+TGG | + | chr6_1:10463204-10463223 | None:intergenic | 20.0% |
| !!! | GTTGTTAAAACATTGATTTT+GGG | - | chr6_1:10463558-10463577 | Msa0874670:CDS | 20.0% |
| !! | TTATAAGGATGTAATTGTAA+CGG | - | chr6_1:10463650-10463669 | Msa0874670:CDS | 20.0% |
| !! | TTATATGTTCAAATAATCTG+TGG | - | chr6_1:10463980-10463999 | Msa0874670:intron | 20.0% |
| !! | TAAAACAAAATTCTATGTAG+TGG | - | chr6_1:10464139-10464158 | Msa0874670:intron | 20.0% |
| !! | AAAACAAAATTCTATGTAGT+GGG | - | chr6_1:10464140-10464159 | Msa0874670:intron | 20.0% |
| !! | TAACTTTCTGTGTATAATAA+AGG | + | chr6_1:10464540-10464559 | None:intergenic | 20.0% |
| !! | AAGGAAATAAGAAATTTACT+TGG | + | chr6_1:10465100-10465119 | None:intergenic | 20.0% |
| !! | AAAGTTATAACATTTGGATA+AGG | + | chr6_1:10465382-10465401 | None:intergenic | 20.0% |
| !! | TTGATGAAAGTTATAACATT+TGG | + | chr6_1:10465388-10465407 | None:intergenic | 20.0% |
| !! | TGATATAATACAGAAACTAA+AGG | + | chr6_1:10465711-10465730 | None:intergenic | 20.0% |
| !!! | CAAAATCTGTATTTGATTTT+AGG | + | chr6_1:10466017-10466036 | None:intergenic | 20.0% |
| !! | AAAGGAAAAAAAACTAATCT+CGG | + | chr6_1:10466196-10466215 | None:intergenic | 20.0% |
| !! | TATGCATACTATCAATATTA+AGG | - | chr6_1:10466294-10466313 | Msa0874670:CDS | 20.0% |
| !! | GATAAATGATAGTATTATAC+AGG | + | chr6_1:10467663-10467682 | None:intergenic | 20.0% |
| !! | AAACTCAATTTACATAGTTT+GGG | + | chr6_1:10467817-10467836 | None:intergenic | 20.0% |
| !!! | ATTTTTCAGGAAATAATCAT+TGG | - | chr6_1:10467972-10467991 | Msa0874670:intron | 20.0% |
| !!! | AGATATGAAATTTTTCCTAT+TGG | - | chr6_1:10468006-10468025 | Msa0874670:intron | 20.0% |
| ! | TGAATGATGAAGAATGAAAT+CGG | + | chr6_1:10462750-10462769 | None:intergenic | 25.0% |
| !!! | ATTTGTTGACTCATTTTTAC+TGG | - | chr6_1:10462904-10462923 | Msa0874670:three_prime_UTR | 25.0% |
| !!! | TGATAATGGTTATTATAAGG+TGG | - | chr6_1:10462964-10462983 | Msa0874670:CDS | 25.0% |
| ! | CAAGATTTATTCAAGATTCT+AGG | - | chr6_1:10463246-10463265 | Msa0874670:intron | 25.0% |
| !!! | GAGAATATGGTTTTAAATTG+TGG | - | chr6_1:10463326-10463345 | Msa0874670:intron | 25.0% |
| !!! | GGTTGTTAAAACATTGATTT+TGG | - | chr6_1:10463557-10463576 | Msa0874670:CDS | 25.0% |
| ! | TATAAAGCAGAAAAAATCAC+AGG | + | chr6_1:10463635-10463654 | None:intergenic | 25.0% |
| !!! | GTGATTTTTTCTGCTTTATA+AGG | - | chr6_1:10463635-10463654 | Msa0874670:CDS | 25.0% |
| ! | AATACATAAAAAAAGAAGGG+AGG | + | chr6_1:10463749-10463768 | None:intergenic | 25.0% |
| ! | ATACAATAAAAAAGGGAAGT+GGG | + | chr6_1:10463958-10463977 | None:intergenic | 25.0% |
| ! | AATACAATAAAAAAGGGAAG+TGG | + | chr6_1:10463959-10463978 | None:intergenic | 25.0% |
| ! | GTAGTTTCAGATAGTTTAAA+TGG | + | chr6_1:10464416-10464435 | None:intergenic | 25.0% |
| ! | AAAAAAATTGGACTCATTGA+TGG | - | chr6_1:10464564-10464583 | Msa0874670:intron | 25.0% |
| ! | AGTACACTTTAATACATATG+TGG | - | chr6_1:10464620-10464639 | Msa0874670:intron | 25.0% |
| ! | GTACACTTTAATACATATGT+GGG | - | chr6_1:10464621-10464640 | Msa0874670:intron | 25.0% |
| ! | TTTCTAACTATGTCAGATAT+TGG | - | chr6_1:10464663-10464682 | Msa0874670:intron | 25.0% |
| !! | TGGAATTTGAAATACATTCA+CGG | - | chr6_1:10464683-10464702 | Msa0874670:intron | 25.0% |
| !!! | GTTTACTTTTGAACACTATT+TGG | - | chr6_1:10464762-10464781 | Msa0874670:intron | 25.0% |
| ! | TAGAGCTTGAATCAAAATAA+GGG | + | chr6_1:10464790-10464809 | None:intergenic | 25.0% |
| ! | GTTGGGGAATATAATTAAAA+TGG | - | chr6_1:10464838-10464857 | Msa0874670:intron | 25.0% |
| !! | TAAAATGGTATGTTTAGTTC+TGG | - | chr6_1:10464853-10464872 | Msa0874670:intron | 25.0% |
| !! | TCAAAATTTTCAGATGCATA+AGG | + | chr6_1:10464883-10464902 | None:intergenic | 25.0% |
| !! | TATGCATCTGAAAATTTTGA+AGG | - | chr6_1:10464883-10464902 | Msa0874670:intron | 25.0% |
| !!! | TTTTAACTAGCAAGTGTATT+CGG | - | chr6_1:10464964-10464983 | Msa0874670:intron | 25.0% |
| ! | TGTATTATCACTCTTAAAGA+AGG | + | chr6_1:10465007-10465026 | None:intergenic | 25.0% |
| ! | TTTCTCAATCAGAATATCAA+CGG | + | chr6_1:10465140-10465159 | None:intergenic | 25.0% |
| ! | TAATAGCTAATCCAAACAAT+CGG | - | chr6_1:10465250-10465269 | Msa0874670:CDS | 25.0% |
| ! | CTGAAAATCATTCAATGTAA+GGG | + | chr6_1:10465431-10465450 | None:intergenic | 25.0% |
| ! | TCTGAAAATCATTCAATGTA+AGG | + | chr6_1:10465432-10465451 | None:intergenic | 25.0% |
| ! | AATACAGAAACTAAAGGAAA+AGG | + | chr6_1:10465705-10465724 | None:intergenic | 25.0% |
| ! | TATTAATTGATGAACCTAAC+TGG | + | chr6_1:10465899-10465918 | None:intergenic | 25.0% |
| ! | AAGGAAAAAAAACTAATCTC+GGG | + | chr6_1:10466195-10466214 | None:intergenic | 25.0% |
| !!! | GCTACTGAAATTTTATTTCT+CGG | + | chr6_1:10466269-10466288 | None:intergenic | 25.0% |
| ! | TATTAAGGAGAATATTTCAC+TGG | - | chr6_1:10466309-10466328 | Msa0874670:CDS | 25.0% |
| ! | AATATAACAAACAACCAACA+AGG | + | chr6_1:10466502-10466521 | None:intergenic | 25.0% |
| ! | ACAGTCACTAAATTTATACT+GGG | + | chr6_1:10466874-10466893 | None:intergenic | 25.0% |
| ! | TACAGTCACTAAATTTATAC+TGG | + | chr6_1:10466875-10466894 | None:intergenic | 25.0% |
| ! | ATTAAGGAATGACAACTAAA+TGG | - | chr6_1:10466919-10466938 | Msa0874670:intron | 25.0% |
| ! | GAGCTAAAGTAAATACAATT+GGG | + | chr6_1:10467008-10467027 | None:intergenic | 25.0% |
| ! | CAATTGAGTCAGAAAAAATT+AGG | + | chr6_1:10467042-10467061 | None:intergenic | 25.0% |
| ! | AAAGGTTTATATAGAGGATT+AGG | - | chr6_1:10467143-10467162 | Msa0874670:intron | 25.0% |
| ! | ATTCAATTAAAACTCATGTC+TGG | - | chr6_1:10467352-10467371 | Msa0874670:intron | 25.0% |
| !! | TTTTGTCTGTATGAAGATAT+TGG | - | chr6_1:10467606-10467625 | Msa0874670:intron | 25.0% |
| ! | GAAACTCAATTTACATAGTT+TGG | + | chr6_1:10467818-10467837 | None:intergenic | 25.0% |
| !! | TGTAAATTGAGTTTCTTTTG+TGG | - | chr6_1:10467823-10467842 | Msa0874670:intron | 25.0% |
| !! | GTAAATTGAGTTTCTTTTGT+GGG | - | chr6_1:10467824-10467843 | Msa0874670:intron | 25.0% |
| ! | TTAGACAATTATCTTGGATT+AGG | - | chr6_1:10468050-10468069 | Msa0874670:exon | 25.0% |
| !! | TTCTTTTCCTAACATTGTTA+TGG | - | chr6_1:10468077-10468096 | Msa0874670:five_prime_UTR | 25.0% |
| !! | TCTTTTCCTAACATTGTTAT+GGG | - | chr6_1:10468078-10468097 | Msa0874670:five_prime_UTR | 25.0% |
| ! | AATTAACCCATAACAATGTT+AGG | + | chr6_1:10468087-10468106 | None:intergenic | 25.0% |
| !! | ATGGGTTAATTATTGTACAA+TGG | - | chr6_1:10468096-10468115 | Msa0874670:five_prime_UTR | 25.0% |
| ! | TGGGTTAATTATTGTACAAT+GGG | - | chr6_1:10468097-10468116 | Msa0874670:five_prime_UTR | 25.0% |
| ATGAAATCGGAAATGAAGAA+AGG | + | chr6_1:10462737-10462756 | None:intergenic | 30.0% | |
| ATAAACTCACAAACACAAAG+TGG | + | chr6_1:10463155-10463174 | None:intergenic | 30.0% | |
| TTGTGTTTGTGAGTTTATGA+TGG | - | chr6_1:10463157-10463176 | Msa0874670:intron | 30.0% | |
| TATCTCTGTAACCGTAATTA+CGG | - | chr6_1:10463349-10463368 | Msa0874670:intron | 30.0% | |
| TTCAATTGGTTGAAGTTGAA+CGG | - | chr6_1:10463427-10463446 | Msa0874670:intron | 30.0% | |
| !! | ATTGATTTTGGGTAAGTATG+TGG | - | chr6_1:10463569-10463588 | Msa0874670:CDS | 30.0% |
| TTATATGTTCAAATCATCCG+TGG | - | chr6_1:10463770-10463789 | Msa0874670:intron | 30.0% | |
| TACAATAAAAAAGGGAAGTG+GGG | + | chr6_1:10463957-10463976 | None:intergenic | 30.0% | |
| ATGTTCAAATAATCTGTGGA+AGG | - | chr6_1:10463984-10464003 | Msa0874670:intron | 30.0% | |
| AGCGCTATAAAAAATGTTGA+TGG | + | chr6_1:10464049-10464068 | None:intergenic | 30.0% | |
| ACGTGAACATAATAAGGATA+AGG | + | chr6_1:10464098-10464117 | None:intergenic | 30.0% | |
| ACATACACGTGAACATAATA+AGG | + | chr6_1:10464104-10464123 | None:intergenic | 30.0% | |
| ! | TAAACTATCTGAAACTACAC+AGG | - | chr6_1:10464418-10464437 | Msa0874670:intron | 30.0% |
| CTAGAGCTTGAATCAAAATA+AGG | + | chr6_1:10464791-10464810 | None:intergenic | 30.0% | |
| !! | TTTTGATTCAAGCTCTAGTT+TGG | - | chr6_1:10464793-10464812 | Msa0874670:intron | 30.0% |
| ! | TTATCCTTCTGTTTGATAGT+TGG | - | chr6_1:10464820-10464839 | Msa0874670:intron | 30.0% |
| ! | TATCCTTCTGTTTGATAGTT+GGG | - | chr6_1:10464821-10464840 | Msa0874670:intron | 30.0% |
| GTGATTTATTTGCAGACATA+AGG | - | chr6_1:10464931-10464950 | Msa0874670:intron | 30.0% | |
| ATTTATTTGCAGACATAAGG+TGG | - | chr6_1:10464934-10464953 | Msa0874670:intron | 30.0% | |
| TTCTCAATCAGAATATCAAC+GGG | + | chr6_1:10465139-10465158 | None:intergenic | 30.0% | |
| !! | GTTTGGATTAGCTATTATGA+AGG | + | chr6_1:10465247-10465266 | None:intergenic | 30.0% |
| ATCAGATATATGAGCTACTT+TGG | + | chr6_1:10465963-10465982 | None:intergenic | 30.0% | |
| AAGTGTAATTCAATCCTTTG+AGG | + | chr6_1:10466078-10466097 | None:intergenic | 30.0% | |
| CTTGCTTGAAATACATGAAT+TGG | - | chr6_1:10466095-10466114 | Msa0874670:intron | 30.0% | |
| !! | ATTTGGTTCAAGCTTTTGAT+AGG | + | chr6_1:10466169-10466188 | None:intergenic | 30.0% |
| AAACTAATCTCGGGTAAATT+TGG | + | chr6_1:10466186-10466205 | None:intergenic | 30.0% | |
| TGTTAAAATGACAACTGCAA+TGG | - | chr6_1:10466540-10466559 | Msa0874670:CDS | 30.0% | |
| CAGTCACTAAATTTATACTG+GGG | + | chr6_1:10466873-10466892 | None:intergenic | 30.0% | |
| CGAGCTAAAGTAAATACAAT+TGG | + | chr6_1:10467009-10467028 | None:intergenic | 30.0% | |
| AGTCAGAAAAAATTAGGAGT+CGG | + | chr6_1:10467036-10467055 | None:intergenic | 30.0% | |
| TGTTAAAGAATTGATCAGTG+AGG | - | chr6_1:10467112-10467131 | Msa0874670:intron | 30.0% | |
| ! | AGTTCAAATAATCATCGACT+TGG | - | chr6_1:10467412-10467431 | Msa0874670:intron | 30.0% |
| AAATTATATGCATGCCAGAT+AGG | - | chr6_1:10467510-10467529 | Msa0874670:intron | 30.0% | |
| TGGCAGATTATCTGAATATA+AGG | + | chr6_1:10467546-10467565 | None:intergenic | 30.0% | |
| ATCTTCCAAAAGGTAAAGTA+TGG | + | chr6_1:10467566-10467585 | None:intergenic | 30.0% | |
| ATATTGGCAGTAAACAAATC+AGG | - | chr6_1:10467622-10467641 | Msa0874670:intron | 30.0% | |
| !!! | GATGAGTTGATTTTGGATAA+TGG | - | chr6_1:10467868-10467887 | Msa0874670:intron | 30.0% |
| !! | AAATCCAATGTTCAAGTTGT+AGG | + | chr6_1:10467917-10467936 | None:intergenic | 30.0% |
| !! | GCTATTCTAACTGATTTTTC+AGG | - | chr6_1:10467959-10467978 | Msa0874670:intron | 30.0% |
| TCAGGAAATAATCATTGGAT+TGG | - | chr6_1:10467977-10467996 | Msa0874670:intron | 30.0% | |
| GTTAATTATTGTACAATGGG+AGG | - | chr6_1:10468100-10468119 | Msa0874670:five_prime_UTR | 30.0% | |
| AACAATTTCGGCATATTTGC+CGG | + | chr6_1:10463093-10463112 | None:intergenic | 35.0% | |
| GCAAATATGCCGAAATTGTT+AGG | - | chr6_1:10463093-10463112 | Msa0874670:intron | 35.0% | |
| ATATGCCGAAATTGTTAGGT+CGG | - | chr6_1:10463097-10463116 | Msa0874670:intron | 35.0% | |
| AGATTGGTAGATAGATGAGA+TGG | + | chr6_1:10463188-10463207 | None:intergenic | 35.0% | |
| ! | ACAATTTTCCGCCGTAATTA+CGG | + | chr6_1:10463363-10463382 | None:intergenic | 35.0% |
| !!! | GTTTTAAAAATCGAGCCGAA+TGG | - | chr6_1:10463399-10463418 | Msa0874670:intron | 35.0% |
| AACCAAACCGTATATAGTGA+CGG | + | chr6_1:10463457-10463476 | None:intergenic | 35.0% | |
| !! | TATATACGGTTTGGTTATCG+TGG | - | chr6_1:10463461-10463480 | Msa0874670:intron | 35.0% |
| GCGCATATTTATTGCAATTG+TGG | - | chr6_1:10463594-10463613 | Msa0874670:CDS | 35.0% | |
| GGGTTGAAAACAAATTGCAT+TGG | - | chr6_1:10464019-10464038 | Msa0874670:intron | 35.0% | |
| ! | TTCACGTGTATGTTTTCTGT+AGG | - | chr6_1:10464111-10464130 | Msa0874670:intron | 35.0% |
| AAAGGATTACTCAAGACAGA+TGG | - | chr6_1:10464275-10464294 | Msa0874670:CDS | 35.0% | |
| ! | GCATTCGTGGTTTGTATAAA+GGG | - | chr6_1:10464297-10464316 | Msa0874670:CDS | 35.0% |
| AAATGGTTCAAGCATCTTGA+AGG | + | chr6_1:10464399-10464418 | None:intergenic | 35.0% | |
| AATTATCGTACCACGTCAAT+TGG | + | chr6_1:10464506-10464525 | None:intergenic | 35.0% | |
| ! | ATCCTTCTGTTTGATAGTTG+GGG | - | chr6_1:10464822-10464841 | Msa0874670:intron | 35.0% |
| GGGCATAAATGAACATCATA+AGG | + | chr6_1:10465119-10465138 | None:intergenic | 35.0% | |
| AGACTTGTAATCCGATTGTT+TGG | + | chr6_1:10465264-10465283 | None:intergenic | 35.0% | |
| TAAGGTAGAAGATGAGAGAA+GGG | + | chr6_1:10465364-10465383 | None:intergenic | 35.0% | |
| ATAAGGTAGAAGATGAGAGA+AGG | + | chr6_1:10465365-10465384 | None:intergenic | 35.0% | |
| ! | TCAGATTAGCCAAAAGTTGA+TGG | - | chr6_1:10465447-10465466 | Msa0874670:intron | 35.0% |
| !! | ATGTTGCTCGTAAGTTGATA+AGG | - | chr6_1:10465512-10465531 | Msa0874670:intron | 35.0% |
| ATTCCGTCTATTAAACTGCT+AGG | - | chr6_1:10465766-10465785 | Msa0874670:intron | 35.0% | |
| CAAATGGCATAATAACCTAC+CGG | + | chr6_1:10465792-10465811 | None:intergenic | 35.0% | |
| TCTGATTTCGTTGTATTCCA+AGG | - | chr6_1:10465977-10465996 | Msa0874670:intron | 35.0% | |
| GAATAACCCATTACATGATC+TGG | + | chr6_1:10466053-10466072 | None:intergenic | 35.0% | |
| ! | GAATATTTCACTGGTTGCTT+TGG | - | chr6_1:10466318-10466337 | Msa0874670:CDS | 35.0% |
| AAAACAATCTTTGGCAGACT+AGG | + | chr6_1:10466384-10466403 | None:intergenic | 35.0% | |
| ! | TAGTCTGCCAAAGATTGTTT+TGG | - | chr6_1:10466383-10466402 | Msa0874670:CDS | 35.0% |
| CATTGGATACAATCAAGACT+CGG | - | chr6_1:10466460-10466479 | Msa0874670:CDS | 35.0% | |
| ACAGGTATTCATAACCTTGT+TGG | - | chr6_1:10466485-10466504 | Msa0874670:CDS | 35.0% | |
| GAAGAAAACAGTTGTCTACA+GGG | + | chr6_1:10466625-10466644 | None:intergenic | 35.0% | |
| AGAAGAAAACAGTTGTCTAC+AGG | + | chr6_1:10466626-10466645 | None:intergenic | 35.0% | |
| AAAGAATTGATCAGTGAGGA+TGG | - | chr6_1:10467116-10467135 | Msa0874670:intron | 35.0% | |
| GGTTGGAAAGGTTTATATAG+AGG | - | chr6_1:10467137-10467156 | Msa0874670:intron | 35.0% | |
| ! | ATGGGGTACTTCAATGATAT+TGG | - | chr6_1:10467190-10467209 | Msa0874670:intron | 35.0% |
| TATCTCAGAACCACAAAACT+GGG | + | chr6_1:10467465-10467484 | None:intergenic | 35.0% | |
| ATATCTCAGAACCACAAAAC+TGG | + | chr6_1:10467466-10467485 | None:intergenic | 35.0% | |
| ! | ATCTGCCATACTTTACCTTT+TGG | - | chr6_1:10467558-10467577 | Msa0874670:intron | 35.0% |
| ! | TCAACTGATTAGCCAAGATA+TGG | - | chr6_1:10467790-10467809 | Msa0874670:intron | 35.0% |
| !!! | TTTGTGGGATGAGTTGATTT+TGG | - | chr6_1:10467839-10467858 | Msa0874670:intron | 35.0% |
| !!! | GATGAGTTGATTTTGGATGT+GGG | - | chr6_1:10467846-10467865 | Msa0874670:intron | 35.0% |
| !!! | CTCAACACTCGCTTTTTCAA+TGG | - | chr6_1:10462672-10462691 | Msa0874670:three_prime_UTR | 40.0% |
| ! | ATACCTGTCCCAGTTGATTT+CGG | + | chr6_1:10462704-10462723 | None:intergenic | 40.0% |
| CTCATAAGTCCTAGCTTAAC+CGG | - | chr6_1:10463071-10463090 | Msa0874670:intron | 40.0% | |
| TATGCCGAAATTGTTAGGTC+GGG | - | chr6_1:10463098-10463117 | Msa0874670:intron | 40.0% | |
| !! | AAACACAAAGTGGAGGTATC+GGG | + | chr6_1:10463145-10463164 | None:intergenic | 40.0% |
| ! | CAAACACAAAGTGGAGGTAT+CGG | + | chr6_1:10463146-10463165 | None:intergenic | 40.0% |
| AACTCACAAACACAAAGTGG+AGG | + | chr6_1:10463152-10463171 | None:intergenic | 40.0% | |
| TAAAAATCGAGCCGAATGGT+AGG | - | chr6_1:10463403-10463422 | Msa0874670:intron | 40.0% | |
| AAAAATCGAGCCGAATGGTA+GGG | - | chr6_1:10463404-10463423 | Msa0874670:intron | 40.0% | |
| ACCAATTGAACCCTACCATT+CGG | + | chr6_1:10463417-10463436 | None:intergenic | 40.0% | |
| AACCGTCACTATATACGGTT+TGG | - | chr6_1:10463452-10463471 | Msa0874670:intron | 40.0% | |
| !! | CGCTGGATTGATGTTTTGTT+CGG | - | chr6_1:10463536-10463555 | Msa0874670:CDS | 40.0% |
| ! | AAATTCTATGTAGTGGGAGC+TGG | - | chr6_1:10464146-10464165 | Msa0874670:intron | 40.0% |
| !!! | ACTCTTTTCGAGTGTTACTG+TGG | - | chr6_1:10464169-10464188 | Msa0874670:intron | 40.0% |
| TAGTCTTCACAACAGAGACA+GGG | + | chr6_1:10464202-10464221 | None:intergenic | 40.0% | |
| AGTGCATTGTCTGTTGTGAA+AGG | - | chr6_1:10464257-10464276 | Msa0874670:intron | 40.0% | |
| ! | GGCATTCGTGGTTTGTATAA+AGG | - | chr6_1:10464296-10464315 | Msa0874670:CDS | 40.0% |
| ! | CGTGGTTTGTATAAAGGGTT+TGG | - | chr6_1:10464302-10464321 | Msa0874670:CDS | 40.0% |
| GTGAGAAATATGATTCTGGC+AGG | + | chr6_1:10464350-10464369 | None:intergenic | 40.0% | |
| GGCAGTGAGAAATATGATTC+TGG | + | chr6_1:10464354-10464373 | None:intergenic | 40.0% | |
| TGTGTTTGTTCCAATTGACG+TGG | - | chr6_1:10464493-10464512 | Msa0874670:intron | 40.0% | |
| TTCCCCAACTATCAAACAGA+AGG | + | chr6_1:10464827-10464846 | None:intergenic | 40.0% | |
| !! | TCGTAAGTTGATAAGGTCTG+AGG | - | chr6_1:10465519-10465538 | Msa0874670:intron | 40.0% |
| !! | CGTAAGTTGATAAGGTCTGA+GGG | - | chr6_1:10465520-10465539 | Msa0874670:intron | 40.0% |
| TGACAGATAAACCAAACCCT+CGG | + | chr6_1:10465561-10465580 | None:intergenic | 40.0% | |
| CAACACACACATGCAACAAA+TGG | + | chr6_1:10465808-10465827 | None:intergenic | 40.0% | |
| !! | TCTGATTTGTGGTGCTACAT+AGG | + | chr6_1:10465832-10465851 | None:intergenic | 40.0% |
| AGCACCACAAATCAGATTGT+AGG | - | chr6_1:10465836-10465855 | Msa0874670:intron | 40.0% | |
| ! | CATGCCTACAATCTGATTTG+TGG | + | chr6_1:10465843-10465862 | None:intergenic | 40.0% |
| AATCAGATTGTAGGCATGTC+TGG | - | chr6_1:10465845-10465864 | Msa0874670:intron | 40.0% | |
| TTGTACTCCACTAACCAGTT+AGG | - | chr6_1:10465882-10465901 | Msa0874670:intron | 40.0% | |
| TGATGAACCTAACTGGTTAG+TGG | + | chr6_1:10465892-10465911 | None:intergenic | 40.0% | |
| TTCGTTGTATTCCAAGGACA+TGG | - | chr6_1:10465983-10466002 | Msa0874670:intron | 40.0% | |
| !! | AATGGGTTATTCAGCCTCAA+AGG | - | chr6_1:10466061-10466080 | Msa0874670:intron | 40.0% |
| AACTTTCCTCAGTTCAACAC+AGG | + | chr6_1:10466123-10466142 | None:intergenic | 40.0% | |
| !! | AGGAGTACCTTTCTCAGATT+TGG | + | chr6_1:10466364-10466383 | None:intergenic | 40.0% |
| !!! | GCCAAAGATTGTTTTGGTTC+AGG | - | chr6_1:10466389-10466408 | Msa0874670:CDS | 40.0% |
| GCCTGAACCAAAACAATCTT+TGG | + | chr6_1:10466393-10466412 | None:intergenic | 40.0% | |
| ATCGTGCATTACAACTCCAT+TGG | - | chr6_1:10466443-10466462 | Msa0874670:CDS | 40.0% | |
| CGAGTCTTGATTGTATCCAA+TGG | + | chr6_1:10466462-10466481 | None:intergenic | 40.0% | |
| ! | TACAATCAAGACTCGGTTAC+AGG | - | chr6_1:10466467-10466486 | Msa0874670:CDS | 40.0% |
| TATTATGAACGCAACCCACT+TGG | - | chr6_1:10466696-10466715 | Msa0874670:intron | 40.0% | |
| ATTATGAACGCAACCCACTT+GGG | - | chr6_1:10466697-10466716 | Msa0874670:intron | 40.0% | |
| ! | ATTCTCTCTGGTGCCAATTT+AGG | - | chr6_1:10466781-10466800 | Msa0874670:intron | 40.0% |
| AATTGATCAGTGAGGATGGT+TGG | - | chr6_1:10467120-10467139 | Msa0874670:intron | 40.0% | |
| ATTTGTCAGCATGTCAGCAT+GGG | - | chr6_1:10467172-10467191 | Msa0874670:intron | 40.0% | |
| ! | ATTACCACATCCCAGTTTTG+TGG | - | chr6_1:10467452-10467471 | Msa0874670:intron | 40.0% |
| AAGGTTGAATCACACCTATC+TGG | + | chr6_1:10467527-10467546 | None:intergenic | 40.0% | |
| ! | CTTCTTCATCTTTTGCGCAT+AGG | + | chr6_1:10467744-10467763 | None:intergenic | 40.0% |
| !! | GCAAAAGATGAAGAAGCGTT+TGG | - | chr6_1:10467748-10467767 | Msa0874670:intron | 40.0% |
| ! | CATAGTTTGGGACCATATCT+TGG | + | chr6_1:10467805-10467824 | None:intergenic | 40.0% |
| !!! | GGATGAGTTGATTTTGGATG+TGG | - | chr6_1:10467845-10467864 | Msa0874670:intron | 40.0% |
| !!! | GATGTGGGATGAGTTGATTT+TGG | - | chr6_1:10467861-10467880 | Msa0874670:intron | 40.0% |
| TGCTCCTACAACTTGAACAT+TGG | - | chr6_1:10467910-10467929 | Msa0874670:intron | 40.0% | |
| ! | TACCTGTCCCAGTTGATTTC+GGG | + | chr6_1:10462703-10462722 | None:intergenic | 45.0% |
| ! | GCATATTTGCCGGTTAAGCT+AGG | + | chr6_1:10463083-10463102 | None:intergenic | 45.0% |
| !! | AACACAAAGTGGAGGTATCG+GGG | + | chr6_1:10463144-10463163 | None:intergenic | 45.0% |
| CTCTGTAACCGTAATTACGG+CGG | - | chr6_1:10463352-10463371 | Msa0874670:intron | 45.0% | |
| CGGTGAACCGTCACTATATA+CGG | - | chr6_1:10463447-10463466 | Msa0874670:intron | 45.0% | |
| CATCCGTGGAAGCTAGATAT+TGG | - | chr6_1:10463784-10463803 | Msa0874670:intron | 45.0% | |
| ! | CCACCAATATCTAGCTTCCA+CGG | + | chr6_1:10463790-10463809 | None:intergenic | 45.0% |
| CGTGGAAGCTAGATATTGGT+GGG | - | chr6_1:10463788-10463807 | Msa0874670:intron | 45.0% | |
| GTGGAAGCTAGATATTGGTG+GGG | - | chr6_1:10463789-10463808 | Msa0874670:intron | 45.0% | |
| TCTGTGGAAGGTAGATCTTG+TGG | - | chr6_1:10463996-10464015 | Msa0874670:intron | 45.0% | |
| CTGTGGAAGGTAGATCTTGT+GGG | - | chr6_1:10463997-10464016 | Msa0874670:intron | 45.0% | |
| TGTGGAAGGTAGATCTTGTG+GGG | - | chr6_1:10463998-10464017 | Msa0874670:intron | 45.0% | |
| ! | CTAGTCTTCACAACAGAGAC+AGG | + | chr6_1:10464203-10464222 | None:intergenic | 45.0% |
| CTGTCTCTGTTGTGAAGACT+AGG | - | chr6_1:10464201-10464220 | Msa0874670:intron | 45.0% | |
| TGTTGTGAAGACTAGGATGC+AGG | - | chr6_1:10464208-10464227 | Msa0874670:intron | 45.0% | |
| GGTTGCTTCAAACCATACTG+CGG | - | chr6_1:10464229-10464248 | Msa0874670:intron | 45.0% | |
| TGCCTTAGAGACCACAAAAG+TGG | - | chr6_1:10464370-10464389 | Msa0874670:CDS | 45.0% | |
| !!! | AGCCACTTTTGTGGTCTCTA+AGG | + | chr6_1:10464375-10464394 | None:intergenic | 45.0% |
| !!! | CTTGAAGGAAGCCACTTTTG+TGG | + | chr6_1:10464384-10464403 | None:intergenic | 45.0% |
| GTATTCGGTCTACGTTGTCT+CGG | - | chr6_1:10464979-10464998 | Msa0874670:intron | 45.0% | |
| ACTTGGCACGATGAAAGACA+GGG | + | chr6_1:10465083-10465102 | None:intergenic | 45.0% | |
| TACTTGGCACGATGAAAGAC+AGG | + | chr6_1:10465084-10465103 | None:intergenic | 45.0% | |
| !! | AGCCAAAAGTTGATGGTGCA+AGG | - | chr6_1:10465454-10465473 | Msa0874670:intron | 45.0% |
| !! | GCCAAAAGTTGATGGTGCAA+GGG | - | chr6_1:10465455-10465474 | Msa0874670:intron | 45.0% |
| ! | ACCCTTGCACCATCAACTTT+TGG | + | chr6_1:10465459-10465478 | None:intergenic | 45.0% |
| ATCCAAGCCCCCACTATATT+GGG | + | chr6_1:10465494-10465513 | None:intergenic | 45.0% | |
| TGATAAGGTCTGAGGGAATC+CGG | - | chr6_1:10465527-10465546 | Msa0874670:intron | 45.0% | |
| ATTCACCATCTAGCGCTGTT+TGG | - | chr6_1:10465587-10465606 | Msa0874670:intron | 45.0% | |
| GCTCAAGTCAACGCTTCTTA+TGG | - | chr6_1:10465623-10465642 | Msa0874670:intron | 45.0% | |
| CAAGTCAACGCTTCTTATGG+AGG | - | chr6_1:10465626-10465645 | Msa0874670:intron | 45.0% | |
| CTTCTTATGGAGGTGAGACA+TGG | - | chr6_1:10465636-10465655 | Msa0874670:intron | 45.0% | |
| CGGCCTAGCAGTTTAATAGA+CGG | + | chr6_1:10465772-10465791 | None:intergenic | 45.0% | |
| CGTCTATTAAACTGCTAGGC+CGG | - | chr6_1:10465770-10465789 | Msa0874670:intron | 45.0% | |
| TATTAAACTGCTAGGCCGGT+AGG | - | chr6_1:10465774-10465793 | Msa0874670:intron | 45.0% | |
| !! | AGGTAGTTTTGCCATGTCCT+TGG | + | chr6_1:10465997-10466016 | None:intergenic | 45.0% |
| AGCCTTGCCAGATCATGTAA+TGG | - | chr6_1:10466043-10466062 | Msa0874670:intron | 45.0% | |
| GCCTTGCCAGATCATGTAAT+GGG | - | chr6_1:10466044-10466063 | Msa0874670:intron | 45.0% | |
| ACCCATTACATGATCTGGCA+AGG | + | chr6_1:10466048-10466067 | None:intergenic | 45.0% | |
| TTGGTACCTGTGTTGAACTG+AGG | - | chr6_1:10466114-10466133 | Msa0874670:intron | 45.0% | |
| GATGACGCCAAATCTGAGAA+AGG | - | chr6_1:10466354-10466373 | Msa0874670:CDS | 45.0% | |
| !!! | ATTGTTTTGGTTCAGGCAGC+AGG | - | chr6_1:10466396-10466415 | Msa0874670:CDS | 45.0% |
| !!! | TTGTTTTGGTTCAGGCAGCA+GGG | - | chr6_1:10466397-10466416 | Msa0874670:CDS | 45.0% |
| ! | TCTCTGGTGCCAATTTAGGT+GGG | - | chr6_1:10466785-10466804 | Msa0874670:intron | 45.0% |
| GCTAAACAGCCCACCTAAAT+TGG | + | chr6_1:10466797-10466816 | None:intergenic | 45.0% | |
| ! | GTGATGGGACATGGAAAGAA+AGG | - | chr6_1:10467074-10467093 | Msa0874670:intron | 45.0% |
| ATCAGTGAGGATGGTTGGAA+AGG | - | chr6_1:10467125-10467144 | Msa0874670:intron | 45.0% | |
| GCTGACATGCTGACAAATCT+TGG | + | chr6_1:10467170-10467189 | None:intergenic | 45.0% | |
| GATTTGTCAGCATGTCAGCA+TGG | - | chr6_1:10467171-10467190 | Msa0874670:intron | 45.0% | |
| TTTGTCAGCATGTCAGCATG+GGG | - | chr6_1:10467173-10467192 | Msa0874670:intron | 45.0% | |
| AGAACCACAAAACTGGGATG+TGG | + | chr6_1:10467459-10467478 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTGTAA+TGG | - | chr6_1:10466228-10466247 | Msa0874670:intron | 5.0% |
| GACGCCCGACCTAACAATTT+CGG | + | chr6_1:10463105-10463124 | None:intergenic | 50.0% | |
| GCCGAATGGTAGGGTTCAAT+TGG | - | chr6_1:10463413-10463432 | Msa0874670:intron | 50.0% | |
| ACAGTCTAATCGTGCCACGT+AGG | - | chr6_1:10463510-10463529 | Msa0874670:intron | 50.0% | |
| TCAATCCAGCGAAACCTACG+TGG | + | chr6_1:10463527-10463546 | None:intergenic | 50.0% | |
| CCGTGGAAGCTAGATATTGG+TGG | - | chr6_1:10463787-10463806 | Msa0874670:intron | 50.0% | |
| GTGGAAGGTAGATCTTGTGG+GGG | - | chr6_1:10463999-10464018 | Msa0874670:intron | 50.0% | |
| ATGCACTTCTCTCCGCAGTA+TGG | + | chr6_1:10464244-10464263 | None:intergenic | 50.0% | |
| CTCAAGACAGATGGCATTCG+TGG | - | chr6_1:10464284-10464303 | Msa0874670:CDS | 50.0% | |
| GATTCTGGCAGGAATTGCTC+CGG | + | chr6_1:10464339-10464358 | None:intergenic | 50.0% | |
| !! | TTGATGGTGCAAGGGTACTC+AGG | - | chr6_1:10465463-10465482 | Msa0874670:intron | 50.0% |
| TCAGGCCATGCCCAATATAG+TGG | - | chr6_1:10465481-10465500 | Msa0874670:intron | 50.0% | |
| CAGGCCATGCCCAATATAGT+GGG | - | chr6_1:10465482-10465501 | Msa0874670:intron | 50.0% | |
| AGGCCATGCCCAATATAGTG+GGG | - | chr6_1:10465483-10465502 | Msa0874670:intron | 50.0% | |
| CATCCAAGCCCCCACTATAT+TGG | + | chr6_1:10465495-10465514 | None:intergenic | 50.0% | |
| GATAAGGTCTGAGGGAATCC+GGG | - | chr6_1:10465528-10465547 | Msa0874670:intron | 50.0% | |
| ATAAGGTCTGAGGGAATCCG+GGG | - | chr6_1:10465529-10465548 | Msa0874670:intron | 50.0% | |
| ACCATCTAGCGCTGTTTGGT+GGG | - | chr6_1:10465591-10465610 | Msa0874670:intron | 50.0% | |
| ! | GCTGTTTGGTGGGCAAGTTA+CGG | - | chr6_1:10465601-10465620 | Msa0874670:intron | 50.0% |
| !!! | TGTTTTGGTTCAGGCAGCAG+GGG | - | chr6_1:10466398-10466417 | Msa0874670:CDS | 50.0% |
| GAGAGAGAGAGAGAGAGAGA+CGG | + | chr6_1:10466572-10466591 | None:intergenic | 50.0% | |
| !! | GTGGTATTGGCTTGGGTCTT+GGG | - | chr6_1:10466728-10466747 | Msa0874670:intron | 50.0% |
| GAATCGAACCTGAGACCTTG+CGG | + | chr6_1:10466765-10466784 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+TGG | - | chr6_1:10466769-10466788 | Msa0874670:intron | 50.0% | |
| ! | CTCTCTGGTGCCAATTTAGG+TGG | - | chr6_1:10466784-10466803 | Msa0874670:intron | 50.0% |
| GACTCAATTGCTTGCACCAC+AGG | - | chr6_1:10467052-10467071 | Msa0874670:intron | 50.0% | |
| ATTGCTTGCACCACAGGTGA+TGG | - | chr6_1:10467058-10467077 | Msa0874670:intron | 50.0% | |
| TTGCTTGCACCACAGGTGAT+GGG | - | chr6_1:10467059-10467078 | Msa0874670:intron | 50.0% | |
| TTTCCATGTCCCATCACCTG+TGG | + | chr6_1:10467071-10467090 | None:intergenic | 50.0% | |
| ! | GAAGCGTTTGGTCAGCAATC+TGG | - | chr6_1:10467760-10467779 | Msa0874670:intron | 50.0% |
| TGGCTGCTCCCGAAATCAAC+TGG | - | chr6_1:10462692-10462711 | Msa0874670:three_prime_UTR | 55.0% | |
| GGCTGCTCCCGAAATCAACT+GGG | - | chr6_1:10462693-10462712 | Msa0874670:three_prime_UTR | 55.0% | |
| CTCCCGAAATCAACTGGGAC+AGG | - | chr6_1:10462698-10462717 | Msa0874670:three_prime_UTR | 55.0% | |
| ACACAGGCTGCCATAGCGAA+TGG | - | chr6_1:10464434-10464453 | Msa0874670:intron | 55.0% | |
| GCTGCCATAGCGAATGGCAT+TGG | - | chr6_1:10464440-10464459 | Msa0874670:intron | 55.0% | |
| ! | GCCATAGCGAATGGCATTGG+TGG | - | chr6_1:10464443-10464462 | Msa0874670:intron | 55.0% |
| GCCACCAATGCCATTCGCTA+TGG | + | chr6_1:10464447-10464466 | None:intergenic | 55.0% | |
| GGCCATGCCCAATATAGTGG+GGG | - | chr6_1:10465484-10465503 | Msa0874670:intron | 55.0% | |
| AGCCCCCACTATATTGGGCA+TGG | + | chr6_1:10465489-10465508 | None:intergenic | 55.0% | |
| ! | TGCCCAATATAGTGGGGGCT+TGG | - | chr6_1:10465489-10465508 | Msa0874670:intron | 55.0% |
| TAAGGTCTGAGGGAATCCGG+GGG | - | chr6_1:10465530-10465549 | Msa0874670:intron | 55.0% | |
| GAATCCGGGGGTTATACCGA+GGG | - | chr6_1:10465542-10465561 | Msa0874670:intron | 55.0% | |
| CAAACCCTCGGTATAACCCC+CGG | + | chr6_1:10465549-10465568 | None:intergenic | 55.0% | |
| CACCATCTAGCGCTGTTTGG+TGG | - | chr6_1:10465590-10465609 | Msa0874670:intron | 55.0% | |
| !!! | GTTTTGGTTCAGGCAGCAGG+GGG | - | chr6_1:10466399-10466418 | Msa0874670:CDS | 55.0% |
| !! | GCAGCAGGGGGTATTATTGC+TGG | - | chr6_1:10466411-10466430 | Msa0874670:CDS | 55.0% |
| TGAACGCAACCCACTTGGGT+TGG | - | chr6_1:10466701-10466720 | Msa0874670:intron | 55.0% | |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | - | chr6_1:10466715-10466734 | Msa0874670:intron | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | - | chr6_1:10466720-10466739 | Msa0874670:intron | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | - | chr6_1:10466721-10466740 | Msa0874670:intron | 55.0% |
| AGACCCAAGCCAATACCACC+AGG | + | chr6_1:10466727-10466746 | None:intergenic | 55.0% | |
| !! | GGTGGTATTGGCTTGGGTCT+TGG | - | chr6_1:10466727-10466746 | Msa0874670:intron | 55.0% |
| GTTAGGTCGGGCGTCATGAC+CGG | - | chr6_1:10463110-10463129 | Msa0874670:intron | 60.0% | |
| TTAGGTCGGGCGTCATGACC+GGG | - | chr6_1:10463111-10463130 | Msa0874670:intron | 60.0% | |
| !! | AGGTATCGGGGTTCGAACCC+CGG | + | chr6_1:10463132-10463151 | None:intergenic | 60.0% |
| TCGTGCCACGTAGGTTTCGC+TGG | - | chr6_1:10463519-10463538 | Msa0874670:intron | 60.0% | |
| GGCAGGAATTGCTCCGGTGA+CGG | + | chr6_1:10464333-10464352 | None:intergenic | 60.0% | |
| GGAATCCGGGGGTTATACCG+AGG | - | chr6_1:10465541-10465560 | Msa0874670:intron | 60.0% | |
| CGGGGGTTATACCGAGGGTT+TGG | - | chr6_1:10465547-10465566 | Msa0874670:intron | 60.0% | |
| GCCCACCAAACAGCGCTAGA+TGG | + | chr6_1:10465595-10465614 | None:intergenic | 60.0% | |
| ACCACCAGGCCAACCCAAGT+GGG | + | chr6_1:10466713-10466732 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | + | chr6_1:10466714-10466733 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTTGCGG+AGG | + | chr6_1:10466762-10466781 | None:intergenic | 60.0% | |
| !! | GCACCACAGGTGATGGGACA+TGG | - | chr6_1:10467065-10467084 | Msa0874670:intron | 60.0% |
| TAGGTCGGGCGTCATGACCG+GGG | - | chr6_1:10463112-10463131 | Msa0874670:intron | 65.0% | |
| GGGTTTGGCACTGCCGTCAC+CGG | - | chr6_1:10464317-10464336 | Msa0874670:CDS | 65.0% | |
| !! | GCAACCCACTTGGGTTGGCC+TGG | - | chr6_1:10466706-10466725 | Msa0874670:intron | 65.0% |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | - | chr6_1:10466709-10466728 | Msa0874670:intron | 65.0% |
| ! | TGGGAGTGTGCTCCTCCGCA+AGG | - | chr6_1:10466747-10466766 | Msa0874670:intron | 65.0% |
| GTGCTCCTCCGCAAGGTCTC+AGG | - | chr6_1:10466754-10466773 | Msa0874670:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 10462589 | 10468167 | 10462589 | ID=Msa0874670;Name=Msa0874670 |
| chr6_1 | mRNA | 10462589 | 10468167 | 10462589 | ID=Msa0874670-mRNA-1;Parent=Msa0874670;Name=Msa0874670-mRNA-1;_AED=0.05;_eAED=0.05;_QI=102|1|1|1|1|1|6|366|323 |
| chr6_1 | exon | 10462589 | 10463019 | 10462589 | ID=Msa0874670-mRNA-1:exon:3232;Parent=Msa0874670-mRNA-1 |
| chr6_1 | exon | 10463529 | 10463682 | 10463529 | ID=Msa0874670-mRNA-1:exon:3231;Parent=Msa0874670-mRNA-1 |
| chr6_1 | exon | 10464268 | 10464412 | 10464268 | ID=Msa0874670-mRNA-1:exon:3230;Parent=Msa0874670-mRNA-1 |
| chr6_1 | exon | 10465109 | 10465305 | 10465109 | ID=Msa0874670-mRNA-1:exon:3229;Parent=Msa0874670-mRNA-1 |
| chr6_1 | exon | 10466242 | 10466623 | 10466242 | ID=Msa0874670-mRNA-1:exon:3228;Parent=Msa0874670-mRNA-1 |
| chr6_1 | exon | 10468037 | 10468167 | 10468037 | ID=Msa0874670-mRNA-1:exon:3227;Parent=Msa0874670-mRNA-1 |
| chr6_1 | five_prime_UTR | 10468066 | 10468167 | 10468066 | ID=Msa0874670-mRNA-1:five_prime_utr;Parent=Msa0874670-mRNA-1 |
| chr6_1 | CDS | 10468037 | 10468065 | 10468037 | ID=Msa0874670-mRNA-1:cds;Parent=Msa0874670-mRNA-1 |
| chr6_1 | CDS | 10466242 | 10466623 | 10466242 | ID=Msa0874670-mRNA-1:cds;Parent=Msa0874670-mRNA-1 |
| chr6_1 | CDS | 10465109 | 10465305 | 10465109 | ID=Msa0874670-mRNA-1:cds;Parent=Msa0874670-mRNA-1 |
| chr6_1 | CDS | 10464268 | 10464412 | 10464268 | ID=Msa0874670-mRNA-1:cds;Parent=Msa0874670-mRNA-1 |
| chr6_1 | CDS | 10463529 | 10463682 | 10463529 | ID=Msa0874670-mRNA-1:cds;Parent=Msa0874670-mRNA-1 |
| chr6_1 | CDS | 10462955 | 10463019 | 10462955 | ID=Msa0874670-mRNA-1:cds;Parent=Msa0874670-mRNA-1 |
| chr6_1 | three_prime_UTR | 10462589 | 10462954 | 10462589 | ID=Msa0874670-mRNA-1:three_prime_utr;Parent=Msa0874670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
