Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393950 | XP_003598262.2 | 82.301 | 226 | 18 | 2 | 1 | 226 | 1 | 204 | 6.86e-124 | 359 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393950 | G7IYL6 | 82.301 | 226 | 18 | 2 | 1 | 226 | 1 | 204 | 3.28e-124 | 359 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0393950 | -0.848192 | 7.166777e-60 | -8.615850e-47 |
| Msa0008410 | Msa0393950 | 0.801352 | 9.377343e-49 | -8.615850e-47 |
| Msa0011720 | Msa0393950 | 0.808103 | 3.649779e-50 | -8.615850e-47 |
| Msa0011850 | Msa0393950 | 0.804285 | 2.324813e-49 | -8.615850e-47 |
| Msa0012440 | Msa0393950 | 0.802672 | 5.019556e-49 | -8.615850e-47 |
| Msa0023830 | Msa0393950 | -0.808865 | 2.510190e-50 | -8.615850e-47 |
| Msa0024680 | Msa0393950 | 0.815028 | 1.140144e-51 | -8.615850e-47 |
| Msa0030000 | Msa0393950 | 0.800595 | 1.338818e-48 | -8.615850e-47 |
| Msa0030310 | Msa0393950 | 0.813397 | 2.612683e-51 | -8.615850e-47 |
| Msa0044020 | Msa0393950 | 0.806146 | 9.475926e-50 | -8.615850e-47 |
| Msa0044710 | Msa0393950 | 0.811790 | 5.868376e-51 | -8.615850e-47 |
| Msa0050430 | Msa0393950 | 0.809702 | 1.660433e-50 | -8.615850e-47 |
| Msa0050730 | Msa0393950 | 0.819709 | 1.007412e-52 | -8.615850e-47 |
| Msa0050760 | Msa0393950 | 0.809118 | 2.215483e-50 | -8.615850e-47 |
| Msa0057140 | Msa0393950 | 0.800782 | 1.226108e-48 | -8.615850e-47 |
| Msa0057240 | Msa0393950 | 0.807579 | 4.717490e-50 | -8.615850e-47 |
| Msa0060600 | Msa0393950 | 0.822241 | 2.632445e-53 | -8.615850e-47 |
| Msa0068760 | Msa0393950 | 0.807188 | 5.709932e-50 | -8.615850e-47 |
| Msa0069260 | Msa0393950 | 0.822669 | 2.092948e-53 | -8.615850e-47 |
| Msa0069280 | Msa0393950 | 0.803683 | 3.101224e-49 | -8.615850e-47 |
| Msa0069310 | Msa0393950 | 0.826926 | 2.074584e-54 | -8.615850e-47 |
| Msa0085360 | Msa0393950 | -0.806864 | 6.686267e-50 | -8.615850e-47 |
| Msa0090590 | Msa0393950 | 0.801123 | 1.044573e-48 | -8.615850e-47 |
| Msa0094100 | Msa0393950 | 0.803382 | 3.580391e-49 | -8.615850e-47 |
| Msa0094920 | Msa0393950 | 0.804126 | 2.508600e-49 | -8.615850e-47 |
| Msa0095010 | Msa0393950 | 0.803516 | 3.358264e-49 | -8.615850e-47 |
| Msa0095380 | Msa0393950 | 0.812307 | 4.528942e-51 | -8.615850e-47 |
| Msa0099510 | Msa0393950 | 0.802890 | 4.526488e-49 | -8.615850e-47 |
| Msa0105340 | Msa0393950 | 0.830962 | 2.185503e-55 | -8.615850e-47 |
| Msa0105420 | Msa0393950 | 0.836854 | 7.330802e-57 | -8.615850e-47 |
| Msa0113160 | Msa0393950 | 0.829610 | 4.674490e-55 | -8.615850e-47 |
| Msa0114540 | Msa0393950 | -0.804944 | 1.693784e-49 | -8.615850e-47 |
| Msa0120330 | Msa0393950 | 0.805911 | 1.061785e-49 | -8.615850e-47 |
| Msa0120340 | Msa0393950 | 0.817820 | 2.704041e-52 | -8.615850e-47 |
| Msa0137040 | Msa0393950 | 0.800658 | 1.299952e-48 | -8.615850e-47 |
| Msa0138970 | Msa0393950 | -0.800152 | 1.647676e-48 | -8.615850e-47 |
| Msa0143080 | Msa0393950 | 0.819798 | 9.612956e-53 | -8.615850e-47 |
| Msa0145950 | Msa0393950 | 0.831493 | 1.617844e-55 | -8.615850e-47 |
| Msa0148120 | Msa0393950 | 0.807249 | 5.542294e-50 | -8.615850e-47 |
| Msa0148340 | Msa0393950 | 0.800844 | 1.190941e-48 | -8.615850e-47 |
| Msa0149560 | Msa0393950 | 0.801126 | 1.042890e-48 | -8.615850e-47 |
| Msa0156650 | Msa0393950 | -0.819989 | 8.692404e-53 | -8.615850e-47 |
| Msa0168100 | Msa0393950 | 0.809640 | 1.712459e-50 | -8.615850e-47 |
| Msa0172350 | Msa0393950 | 0.829399 | 5.261188e-55 | -8.615850e-47 |
| Msa0183590 | Msa0393950 | 0.825081 | 5.692599e-54 | -8.615850e-47 |
| Msa0183620 | Msa0393950 | 0.801215 | 1.000059e-48 | -8.615850e-47 |
| Msa0183830 | Msa0393950 | 0.805341 | 1.399187e-49 | -8.615850e-47 |
| Msa0185590 | Msa0393950 | 0.839661 | 1.386210e-57 | -8.615850e-47 |
| Msa0188630 | Msa0393950 | 0.827328 | 1.662156e-54 | -8.615850e-47 |
| Msa0188680 | Msa0393950 | -0.812640 | 3.829289e-51 | -8.615850e-47 |
| Msa0194970 | Msa0393950 | 0.821627 | 3.652124e-53 | -8.615850e-47 |
| Msa0207000 | Msa0393950 | 0.814078 | 1.849797e-51 | -8.615850e-47 |
| Msa0208520 | Msa0393950 | 0.809120 | 2.213640e-50 | -8.615850e-47 |
| Msa0208630 | Msa0393950 | 0.825849 | 3.744592e-54 | -8.615850e-47 |
| Msa0223100 | Msa0393950 | 0.845469 | 3.983197e-59 | -8.615850e-47 |
| Msa0223290 | Msa0393950 | 0.862644 | 4.380875e-64 | -8.615850e-47 |
| Msa0223380 | Msa0393950 | 0.833338 | 5.648617e-56 | -8.615850e-47 |
| Msa0224730 | Msa0393950 | 0.818357 | 2.044374e-52 | -8.615850e-47 |
| Msa0227510 | Msa0393950 | 0.829922 | 3.925543e-55 | -8.615850e-47 |
| Msa0235890 | Msa0393950 | 0.807976 | 3.885748e-50 | -8.615850e-47 |
| Msa0236980 | Msa0393950 | 0.818532 | 1.866069e-52 | -8.615850e-47 |
| Msa0368660 | Msa0393950 | 0.813843 | 2.084782e-51 | -8.615850e-47 |
| Msa0369570 | Msa0393950 | 0.842985 | 1.850767e-58 | -8.615850e-47 |
| Msa0371070 | Msa0393950 | 0.801439 | 9.001808e-49 | -8.615850e-47 |
| Msa0377530 | Msa0393950 | 0.863712 | 2.047384e-64 | -8.615850e-47 |
| Msa0380040 | Msa0393950 | 0.822483 | 2.312953e-53 | -8.615850e-47 |
| Msa0392070 | Msa0393950 | 0.826811 | 2.210504e-54 | -8.615850e-47 |
| Msa0393950 | Msa0402330 | 0.819041 | 1.430235e-52 | -8.615850e-47 |
| Msa0393950 | Msa0414950 | -0.835896 | 1.285114e-56 | -8.615850e-47 |
| Msa0393950 | Msa0415810 | 0.839733 | 1.328378e-57 | -8.615850e-47 |
| Msa0393950 | Msa0420000 | 0.831373 | 1.732098e-55 | -8.615850e-47 |
| Msa0393950 | Msa0422830 | 0.800325 | 1.519330e-48 | -8.615850e-47 |
| Msa0393950 | Msa0422910 | 0.805450 | 1.326871e-49 | -8.615850e-47 |
| Msa0393950 | Msa0423360 | -0.816027 | 6.834370e-52 | -8.615850e-47 |
| Msa0393950 | Msa0426330 | 0.835229 | 1.894809e-56 | -8.615850e-47 |
| Msa0393950 | Msa0426810 | 0.829004 | 6.559831e-55 | -8.615850e-47 |
| Msa0393950 | Msa0429290 | 0.829248 | 5.722935e-55 | -8.615850e-47 |
| Msa0393950 | Msa0436280 | -0.832338 | 1.000924e-55 | -8.615850e-47 |
| Msa0393950 | Msa0437710 | 0.830119 | 3.514143e-55 | -8.615850e-47 |
| Msa0393950 | Msa0441800 | 0.880446 | 5.453660e-70 | -8.615850e-47 |
| Msa0393950 | Msa0460930 | 0.816277 | 6.007591e-52 | -8.615850e-47 |
| Msa0393950 | Msa0464900 | 0.824821 | 6.556498e-54 | -8.615850e-47 |
| Msa0393950 | Msa0466280 | 0.810880 | 9.251728e-51 | -8.615850e-47 |
| Msa0393950 | Msa0467900 | -0.802836 | 4.642708e-49 | -8.615850e-47 |
| Msa0393950 | Msa0469910 | -0.824085 | 9.768695e-54 | -8.615850e-47 |
| Msa0393950 | Msa0473240 | 0.866055 | 3.770694e-65 | -8.615850e-47 |
| Msa0393950 | Msa0475580 | 0.830655 | 2.598736e-55 | -8.615850e-47 |
| Msa0393950 | Msa0480320 | 0.842392 | 2.658704e-58 | -8.615850e-47 |
| Msa0393950 | Msa0487910 | 0.810508 | 1.113307e-50 | -8.615850e-47 |
| Msa0393950 | Msa0489420 | 0.855512 | 6.001407e-62 | -8.615850e-47 |
| Msa0393950 | Msa0490300 | 0.832142 | 1.119131e-55 | -8.615850e-47 |
| Msa0393950 | Msa0490350 | 0.812801 | 3.530284e-51 | -8.615850e-47 |
| Msa0393950 | Msa0505060 | 0.801045 | 1.083547e-48 | -8.615850e-47 |
| Msa0393950 | Msa0506890 | 0.847201 | 1.343116e-59 | -8.615850e-47 |
| Msa0393950 | Msa0506940 | 0.815812 | 7.630651e-52 | -8.615850e-47 |
| Msa0393950 | Msa0508200 | 0.825463 | 4.623054e-54 | -8.615850e-47 |
| Msa0393950 | Msa0509970 | 0.833089 | 6.513514e-56 | -8.615850e-47 |
| Msa0393950 | Msa0513440 | 0.817617 | 3.004704e-52 | -8.615850e-47 |
| Msa0393950 | Msa0517490 | 0.870092 | 1.893976e-66 | -8.615850e-47 |
| Msa0393950 | Msa0519220 | 0.827768 | 1.303812e-54 | -8.615850e-47 |
| Msa0393950 | Msa0521880 | 0.834189 | 3.460679e-56 | -8.615850e-47 |
| Msa0393950 | Msa0526710 | 0.814733 | 1.325492e-51 | -8.615850e-47 |
| Msa0393950 | Msa0526890 | 0.831625 | 1.501067e-55 | -8.615850e-47 |
| Msa0393950 | Msa0532330 | 0.820114 | 8.138967e-53 | -8.615850e-47 |
| Msa0393950 | Msa0535030 | 0.843943 | 1.026457e-58 | -8.615850e-47 |
| Msa0393950 | Msa0535060 | 0.847781 | 9.306812e-60 | -8.615850e-47 |
| Msa0393950 | Msa0542160 | 0.836796 | 7.583944e-57 | -8.615850e-47 |
| Msa0393950 | Msa0546380 | 0.831609 | 1.515264e-55 | -8.615850e-47 |
| Msa0393950 | Msa0547400 | 0.820221 | 7.693267e-53 | -8.615850e-47 |
| Msa0393950 | Msa0576980 | 0.828022 | 1.132317e-54 | -8.615850e-47 |
| Msa0393950 | Msa0577220 | 0.813218 | 2.861060e-51 | -8.615850e-47 |
| Msa0393950 | Msa0590680 | 0.802349 | 5.852522e-49 | -8.615850e-47 |
| Msa0393950 | Msa0591060 | 0.809415 | 1.913767e-50 | -8.615850e-47 |
| Msa0393950 | Msa0591770 | 0.840521 | 8.272486e-58 | -8.615850e-47 |
| Msa0393950 | Msa0598460 | 0.822700 | 2.059211e-53 | -8.615850e-47 |
| Msa0393950 | Msa0602120 | 0.814421 | 1.553992e-51 | -8.615850e-47 |
| Msa0393950 | Msa0607200 | 0.818270 | 2.139370e-52 | -8.615850e-47 |
| Msa0393950 | Msa0618010 | 0.802047 | 6.752325e-49 | -8.615850e-47 |
| Msa0393950 | Msa0623700 | 0.801251 | 9.834423e-49 | -8.615850e-47 |
| Msa0393950 | Msa0626220 | 0.801317 | 9.533714e-49 | -8.615850e-47 |
| Msa0393950 | Msa0638280 | 0.840073 | 1.082669e-57 | -8.615850e-47 |
| Msa0393950 | Msa0638320 | 0.840975 | 6.289008e-58 | -8.615850e-47 |
| Msa0393950 | Msa0639120 | 0.808687 | 2.740649e-50 | -8.615850e-47 |
| Msa0393950 | Msa0642650 | 0.803878 | 2.824933e-49 | -8.615850e-47 |
| Msa0393950 | Msa0643250 | 0.805203 | 1.495131e-49 | -8.615850e-47 |
| Msa0393950 | Msa0669850 | 0.847047 | 1.480369e-59 | -8.615850e-47 |
| Msa0393950 | Msa0670980 | 0.807782 | 4.271219e-50 | -8.615850e-47 |
| Msa0393950 | Msa0677270 | 0.842972 | 1.865694e-58 | -8.615850e-47 |
| Msa0393950 | Msa0682950 | 0.803679 | 3.106310e-49 | -8.615850e-47 |
| Msa0393950 | Msa0706370 | 0.824498 | 7.812034e-54 | -8.615850e-47 |
| Msa0393950 | Msa0711490 | 0.810827 | 9.499466e-51 | -8.615850e-47 |
| Msa0393950 | Msa0715110 | 0.810969 | 8.847250e-51 | -8.615850e-47 |
| Msa0393950 | Msa0739120 | 0.823749 | 1.171533e-53 | -8.615850e-47 |
| Msa0393950 | Msa0743260 | 0.817910 | 2.580378e-52 | -8.615850e-47 |
| Msa0393950 | Msa0743680 | 0.843416 | 1.420018e-58 | -8.615850e-47 |
| Msa0393950 | Msa0754720 | -0.855993 | 4.345232e-62 | -8.615850e-47 |
| Msa0393950 | Msa0756630 | -0.833071 | 6.582015e-56 | -8.615850e-47 |
| Msa0393950 | Msa0757050 | 0.805728 | 1.160177e-49 | -8.615850e-47 |
| Msa0393950 | Msa0778320 | 0.809030 | 2.314032e-50 | -8.615850e-47 |
| Msa0393950 | Msa0784620 | 0.837295 | 5.653800e-57 | -8.615850e-47 |
| Msa0393950 | Msa0788710 | 0.818155 | 2.271628e-52 | -8.615850e-47 |
| Msa0393950 | Msa0789270 | 0.811509 | 6.756850e-51 | -8.615850e-47 |
| Msa0393950 | Msa0789280 | 0.806541 | 7.825781e-50 | -8.615850e-47 |
| Msa0393950 | Msa0789290 | 0.800711 | 1.267687e-48 | -8.615850e-47 |
| Msa0393950 | Msa0789570 | 0.829036 | 6.443403e-55 | -8.615850e-47 |
| Msa0393950 | Msa0790390 | -0.815602 | 8.500188e-52 | -8.615850e-47 |
| Msa0393950 | Msa0797120 | 0.800289 | 1.545479e-48 | -8.615850e-47 |
| Msa0393950 | Msa0813100 | 0.801097 | 1.057436e-48 | -8.615850e-47 |
| Msa0393950 | Msa0824730 | 0.815213 | 1.037226e-51 | -8.615850e-47 |
| Msa0393950 | Msa0829620 | 0.808498 | 3.007060e-50 | -8.615850e-47 |
| Msa0393950 | Msa0850960 | 0.801522 | 8.653256e-49 | -8.615850e-47 |
| Msa0393950 | Msa0852730 | 0.802279 | 6.048773e-49 | -8.615850e-47 |
| Msa0393950 | Msa0863800 | 0.836639 | 8.315427e-57 | -8.615850e-47 |
| Msa0393950 | Msa0866120 | 0.813947 | 1.977563e-51 | -8.615850e-47 |
| Msa0393950 | Msa0870620 | 0.823794 | 1.143009e-53 | -8.615850e-47 |
| Msa0393950 | Msa0874670 | 0.802175 | 6.355622e-49 | -8.615850e-47 |
| Msa0393950 | Msa0890250 | 0.806805 | 6.881854e-50 | -8.615850e-47 |
| Msa0393950 | Msa0891040 | 0.804035 | 2.620615e-49 | -8.615850e-47 |
| Msa0393950 | Msa0891600 | -0.813217 | 2.861741e-51 | -8.615850e-47 |
| Msa0393950 | Msa0893810 | 0.832434 | 9.476884e-56 | -8.615850e-47 |
| Msa0393950 | Msa0907700 | 0.808766 | 2.635217e-50 | -8.615850e-47 |
| Msa0393950 | Msa0908170 | 0.836405 | 9.540958e-57 | -8.615850e-47 |
| Msa0393950 | Msa0909000 | -0.801862 | 7.368547e-49 | -8.615850e-47 |
| Msa0393950 | Msa0910980 | -0.816286 | 5.981436e-52 | -8.615850e-47 |
| Msa0393950 | Msa0922540 | 0.807951 | 3.933409e-50 | -8.615850e-47 |
| Msa0393950 | Msa0925160 | 0.810800 | 9.625471e-51 | -8.615850e-47 |
| Msa0393950 | Msa0933440 | 0.838948 | 2.123410e-57 | -8.615850e-47 |
| Msa0393950 | Msa0937670 | 0.810142 | 1.335254e-50 | -8.615850e-47 |
| Msa0393950 | Msa0941710 | 0.804413 | 2.185903e-49 | -8.615850e-47 |
| Msa0393950 | Msa0941730 | 0.811900 | 5.555687e-51 | -8.615850e-47 |
| Msa0393950 | Msa0941750 | 0.805215 | 1.486734e-49 | -8.615850e-47 |
| Msa0393950 | Msa0946320 | 0.824146 | 9.455217e-54 | -8.615850e-47 |
| Msa0393950 | Msa0958020 | 0.818418 | 1.981059e-52 | -8.615850e-47 |
| Msa0393950 | Msa0959010 | 0.828000 | 1.146352e-54 | -8.615850e-47 |
| Msa0393950 | Msa0974530 | 0.801507 | 8.716677e-49 | -8.615850e-47 |
| Msa0393950 | Msa0990520 | 0.801699 | 7.959460e-49 | -8.615850e-47 |
| Msa0393950 | Msa0993530 | 0.847053 | 1.474691e-59 | -8.615850e-47 |
| Msa0393950 | Msa1000940 | 0.800883 | 1.169374e-48 | -8.615850e-47 |
| Msa0393950 | Msa1015060 | 0.838345 | 3.039345e-57 | -8.615850e-47 |
| Msa0393950 | Msa1018790 | 0.811120 | 8.208027e-51 | -8.615850e-47 |
| Msa0393950 | Msa1026760 | 0.817900 | 2.593540e-52 | -8.615850e-47 |
| Msa0393950 | Msa1026790 | 0.821119 | 4.783832e-53 | -8.615850e-47 |
| Msa0393950 | Msa1033560 | 0.827039 | 1.949749e-54 | -8.615850e-47 |
| Msa0393950 | Msa1037700 | -0.817811 | 2.717123e-52 | -8.615850e-47 |
| Msa0393950 | Msa1040890 | 0.821848 | 3.245539e-53 | -8.615850e-47 |
| Msa0393950 | Msa1046300 | 0.830780 | 2.422187e-55 | -8.615850e-47 |
| Msa0393950 | Msa1047720 | 0.804085 | 2.558230e-49 | -8.615850e-47 |
| Msa0393950 | Msa1053260 | 0.809146 | 2.185330e-50 | -8.615850e-47 |
| Msa0393950 | Msa1069660 | -0.823282 | 1.506328e-53 | -8.615850e-47 |
| Msa0393950 | Msa1072460 | -0.808367 | 3.206546e-50 | -8.615850e-47 |
| Msa0393950 | Msa1077670 | 0.807737 | 4.366495e-50 | -8.615850e-47 |
| Msa0393950 | Msa1082700 | 0.812458 | 4.197236e-51 | -8.615850e-47 |
| Msa0393950 | Msa1083210 | 0.823419 | 1.399174e-53 | -8.615850e-47 |
| Msa0393950 | Msa1087470 | 0.817410 | 3.346479e-52 | -8.615850e-47 |
| Msa0393950 | Msa1089840 | 0.801485 | 8.805678e-49 | -8.615850e-47 |
| Msa0393950 | Msa1092820 | 0.844469 | 7.414759e-59 | -8.615850e-47 |
| Msa0393950 | Msa1097380 | 0.807162 | 5.784293e-50 | -8.615850e-47 |
| Msa0393950 | Msa1106810 | 0.803715 | 3.054534e-49 | -8.615850e-47 |
| Msa0393950 | Msa1109570 | 0.811826 | 5.764564e-51 | -8.615850e-47 |
| Msa0393950 | Msa1111810 | 0.810007 | 1.427800e-50 | -8.615850e-47 |
| Msa0393950 | Msa1113200 | 0.822115 | 2.814906e-53 | -8.615850e-47 |
| Msa0393950 | Msa1124310 | 0.812284 | 4.580808e-51 | -8.615850e-47 |
| Msa0393950 | Msa1127830 | 0.834755 | 2.494598e-56 | -8.615850e-47 |
| Msa0393950 | Msa1130210 | -0.848075 | 7.722513e-60 | -8.615850e-47 |
| Msa0393950 | Msa1160400 | 0.808269 | 3.365110e-50 | -8.615850e-47 |
| Msa0393950 | Msa1172590 | 0.806515 | 7.922652e-50 | -8.615850e-47 |
| Msa0393950 | Msa1193950 | -0.806635 | 7.474082e-50 | -8.615850e-47 |
| Msa0393950 | Msa1217660 | 0.801346 | 9.403224e-49 | -8.615850e-47 |
| Msa0393950 | Msa1217830 | 0.809183 | 2.146497e-50 | -8.615850e-47 |
| Msa0393950 | Msa1217860 | 0.844324 | 8.113168e-59 | -8.615850e-47 |
| Msa0393950 | Msa1218650 | 0.802324 | 5.921712e-49 | -8.615850e-47 |
| Msa0393950 | Msa1221900 | 0.803687 | 3.095583e-49 | -8.615850e-47 |
| Msa0393950 | Msa1233500 | 0.810188 | 1.305292e-50 | -8.615850e-47 |
| Msa0393950 | Msa1236070 | -0.819911 | 9.057431e-53 | -8.615850e-47 |
| Msa0393950 | Msa1237030 | 0.816785 | 4.623386e-52 | -8.615850e-47 |
| Msa0393950 | Msa1246530 | -0.808403 | 3.151031e-50 | -8.615850e-47 |
| Msa0393950 | Msa1249870 | 0.812204 | 4.769106e-51 | -8.615850e-47 |
| Msa0393950 | Msa1249920 | 0.825959 | 3.527179e-54 | -8.615850e-47 |
| Msa0393950 | Msa1265070 | 0.805504 | 1.292961e-49 | -8.615850e-47 |
| Msa0393950 | Msa1265960 | 0.809338 | 1.988059e-50 | -8.615850e-47 |
| Msa0393950 | Msa1267260 | 0.803776 | 2.966797e-49 | -8.615850e-47 |
| Msa0393950 | Msa1269300 | 0.807230 | 5.594734e-50 | -8.615850e-47 |
| Msa0393950 | Msa1269580 | -0.834896 | 2.298865e-56 | -8.615850e-47 |
| Msa0393950 | Msa1280130 | 0.804307 | 2.300380e-49 | -8.615850e-47 |
| Msa0393950 | Msa1291350 | 0.808482 | 3.031362e-50 | -8.615850e-47 |
| Msa0393950 | Msa1323190 | 0.821714 | 3.485822e-53 | -8.615850e-47 |
| Msa0393950 | Msa1337730 | 0.838513 | 2.750270e-57 | -8.615850e-47 |
| Msa0393950 | Msa1362510 | 0.858058 | 1.068763e-62 | -8.615850e-47 |
| Msa0393950 | Msa1365150 | 0.801665 | 8.090135e-49 | -8.615850e-47 |
| Msa0393950 | Msa1382310 | 0.811791 | 5.868225e-51 | -8.615850e-47 |
| Msa0393950 | Msa1385620 | 0.814517 | 1.479792e-51 | -8.615850e-47 |
| Msa0393950 | Msa1390230 | 0.827809 | 1.274128e-54 | -8.615850e-47 |
| Msa0393950 | Msa1390310 | 0.827246 | 1.739602e-54 | -8.615850e-47 |
| Msa0393950 | Msa1398860 | 0.817321 | 3.504296e-52 | -8.615850e-47 |
| Msa0393950 | Msa1403580 | -0.818979 | 1.477115e-52 | -8.615850e-47 |
| Msa0393950 | Msa1403930 | -0.825935 | 3.573244e-54 | -8.615850e-47 |
| Msa0393950 | Msa1408790 | 0.817471 | 3.242342e-52 | -8.615850e-47 |
| Msa0393950 | Msa1416390 | 0.801017 | 1.098173e-48 | -8.615850e-47 |
| Msa0393950 | Msa1427760 | 0.812029 | 5.206006e-51 | -8.615850e-47 |
| Msa0393950 | Msa1427830 | 0.801987 | 6.945268e-49 | -8.615850e-47 |
| Msa0393950 | Msa1429360 | -0.828207 | 1.022019e-54 | -8.615850e-47 |
| Msa0393950 | Msa1429420 | 0.807229 | 5.597509e-50 | -8.615850e-47 |
| Msa0393950 | Msa1431000 | 0.809256 | 2.069855e-50 | -8.615850e-47 |
| Msa0393950 | Msa1435750 | 0.802951 | 4.397017e-49 | -8.615850e-47 |
| Msa0393950 | Msa1436040 | 0.808543 | 2.941065e-50 | -8.615850e-47 |
| Msa0393950 | Msa1439960 | 0.849246 | 3.656392e-60 | -8.615850e-47 |
| Msa0393950 | Msa1440600 | 0.810952 | 8.922333e-51 | -8.615850e-47 |
| Msa0393950 | Msa1442220 | -0.819288 | 1.256554e-52 | -8.615850e-47 |
| Msa0393950 | Msa1443290 | -0.818181 | 2.241028e-52 | -8.615850e-47 |
| Msa0393950 | Msa1452470 | 0.808063 | 3.722624e-50 | -8.615850e-47 |
| Msa0393950 | Msa1454110 | 0.823096 | 1.664437e-53 | -8.615850e-47 |
| Msa0393950 | Msa1456650 | 0.834070 | 3.706859e-56 | -8.615850e-47 |
| Msa0246310 | Msa0393950 | 0.802356 | 5.833597e-49 | -8.615850e-47 |
| Msa0251250 | Msa0393950 | 0.820515 | 6.584722e-53 | -8.615850e-47 |
| Msa0252180 | Msa0393950 | 0.811328 | 7.396631e-51 | -8.615850e-47 |
| Msa0265820 | Msa0393950 | 0.810963 | 8.874557e-51 | -8.615850e-47 |
| Msa0267760 | Msa0393950 | 0.821529 | 3.845870e-53 | -8.615850e-47 |
| Msa0270220 | Msa0393950 | -0.810429 | 1.157758e-50 | -8.615850e-47 |
| Msa0270270 | Msa0393950 | 0.804145 | 2.485808e-49 | -8.615850e-47 |
| Msa0275030 | Msa0393950 | 0.807299 | 5.408602e-50 | -8.615850e-47 |
| Msa0275400 | Msa0393950 | -0.829331 | 5.464909e-55 | -8.615850e-47 |
| Msa0280490 | Msa0393950 | 0.823164 | 1.604721e-53 | -8.615850e-47 |
| Msa0288240 | Msa0393950 | 0.805738 | 1.154540e-49 | -8.615850e-47 |
| Msa0288730 | Msa0393950 | 0.826470 | 2.665013e-54 | -8.615850e-47 |
| Msa0291520 | Msa0393950 | 0.800939 | 1.138940e-48 | -8.615850e-47 |
| Msa0292180 | Msa0393950 | 0.808713 | 2.705365e-50 | -8.615850e-47 |
| Msa0296760 | Msa0393950 | 0.847881 | 8.732791e-60 | -8.615850e-47 |
| Msa0302650 | Msa0393950 | 0.858856 | 6.182244e-63 | -8.615850e-47 |
| Msa0304290 | Msa0393950 | 0.808597 | 2.864937e-50 | -8.615850e-47 |
| Msa0304330 | Msa0393950 | 0.806519 | 7.906823e-50 | -8.615850e-47 |
| Msa0305890 | Msa0393950 | 0.805286 | 1.436272e-49 | -8.615850e-47 |
| Msa0307110 | Msa0393950 | 0.810554 | 1.088309e-50 | -8.615850e-47 |
| Msa0307830 | Msa0393950 | -0.823387 | 1.423774e-53 | -8.615850e-47 |
| Msa0315240 | Msa0393950 | 0.847660 | 1.004929e-59 | -8.615850e-47 |
| Msa0316850 | Msa0393950 | 0.811658 | 6.269583e-51 | -8.615850e-47 |
| Msa0319200 | Msa0393950 | 0.811558 | 6.593500e-51 | -8.615850e-47 |
| Msa0320100 | Msa0393950 | 0.805812 | 1.114130e-49 | -8.615850e-47 |
| Msa0326670 | Msa0393950 | 0.816075 | 6.664684e-52 | -8.615850e-47 |
| Msa0328210 | Msa0393950 | 0.844667 | 6.560768e-59 | -8.615850e-47 |
| Msa0335040 | Msa0393950 | 0.817042 | 4.048897e-52 | -8.615850e-47 |
| Msa0344870 | Msa0393950 | 0.837314 | 5.591542e-57 | -8.615850e-47 |
| Msa0347360 | Msa0393950 | 0.824907 | 6.257824e-54 | -8.615850e-47 |
| Msa0351080 | Msa0393950 | 0.815503 | 8.941079e-52 | -8.615850e-47 |
| Msa0355270 | Msa0393950 | 0.813899 | 2.026542e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393950 | MtrunA17_Chr3g0079511 | 90.000 | 160 | 13 | 1 | 67 | 226 | 1 | 157 | 2.86e-99 | 285 |
| Msa0393950 | MtrunA17_Chr3g0079501 | 75.806 | 62 | 15 | 0 | 1 | 62 | 1 | 62 | 1.13e-26 | 98.2 |
| Msa0393950 | MtrunA17_Chr4g0033921 | 34.266 | 143 | 87 | 4 | 83 | 223 | 74 | 211 | 3.38e-20 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393950 | AT2G30695.2 | 57.343 | 143 | 57 | 2 | 84 | 226 | 59 | 197 | 2.67e-50 | 162 |
| Msa0393950 | AT2G30695.3 | 57.343 | 143 | 57 | 2 | 84 | 226 | 59 | 197 | 2.67e-50 | 162 |
| Msa0393950 | AT2G30695.1 | 57.343 | 143 | 57 | 2 | 84 | 226 | 59 | 197 | 2.67e-50 | 162 |
| Msa0393950 | AT2G30695.4 | 52.381 | 63 | 29 | 1 | 84 | 146 | 59 | 120 | 1.15e-13 | 66.2 |
Find 57 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATGATGTGTTTCAGAAAA+TGG | 0.139014 | 3_2:+8258092 | Msa0393950:CDS |
| TGAAATCCGTTTCTATTTAT+AGG | 0.218013 | 3_2:+8256961 | Msa0393950:CDS |
| TAACAGTTATGTTATCTTAC+AGG | 0.237471 | 3_2:+8255832 | Msa0393950:five_prime_UTR |
| CCTACTGCTTCTGTGTTATC+AGG | 0.250342 | 3_2:+8257002 | Msa0393950:CDS |
| GAAATCCGTTTCTATTTATA+GGG | 0.263808 | 3_2:+8256962 | Msa0393950:CDS |
| ACCTCTAATAAAATGTCTTT+TGG | 0.275489 | 3_2:-8258931 | None:intergenic |
| GGAGAAACACAAATGTTCTT+TGG | 0.276961 | 3_2:-8260563 | None:intergenic |
| CCAGGATTTCGTAGAGTAAA+AGG | 0.298327 | 3_2:+8258135 | Msa0393950:CDS |
| CAGATAAGCATCGAGGTATC+TGG | 0.342280 | 3_2:+8258048 | Msa0393950:intron |
| ATGGAGTGACATTGCTTCTT+CGG | 0.375429 | 3_2:+8260017 | Msa0393950:three_prime_UTR |
| TTTATATGTTAAAATCTTAC+CGG | 0.375682 | 3_2:+8259994 | Msa0393950:three_prime_UTR |
| AATACTATTTGAACGCACTT+TGG | 0.397464 | 3_2:-8260482 | None:intergenic |
| CTACAAAATGAATTTAACTT+TGG | 0.404253 | 3_2:+8260377 | Msa0393950:three_prime_UTR |
| TCTGTCTTTCTTTGAAGCAT+GGG | 0.424747 | 3_2:+8256193 | Msa0393950:CDS |
| TTCTGTCTTTCTTTGAAGCA+TGG | 0.425898 | 3_2:+8256192 | Msa0393950:CDS |
| TTGCTTAAATCAAGTGTTTG+AGG | 0.431774 | 3_2:+8255897 | Msa0393950:five_prime_UTR |
| CTGTGGTGTTCACCATCATT+AGG | 0.438728 | 3_2:-8260192 | None:intergenic |
| GAACATTTGTGTTTCTCCAT+AGG | 0.469255 | 3_2:+8260568 | Msa0393950:three_prime_UTR |
| AGATCTTGAAACTACATTTG+AGG | 0.477759 | 3_2:+8259912 | Msa0393950:CDS |
| AAAATCACGGTGGCATTTCG+CGG | 0.495444 | 3_2:+8260119 | Msa0393950:three_prime_UTR |
| CTTTCTTTGAAGCATGGGCA+CGG | 0.495628 | 3_2:+8256198 | Msa0393950:CDS |
| CTCAGCTGTGGCTGAGTATG+TGG | 0.496065 | 3_2:+8259002 | Msa0393950:CDS |
| CTCTAACACTCACTCTCCTA+TGG | 0.497232 | 3_2:-8260584 | None:intergenic |
| AGAAGCAATGTCACTCCATC+CGG | 0.498714 | 3_2:-8260013 | None:intergenic |
| ACATTGTTTCCTCCTAATGA+TGG | 0.504607 | 3_2:+8260180 | Msa0393950:three_prime_UTR |
| TTGTTCCCTATAAATAGAAA+CGG | 0.506405 | 3_2:-8256967 | None:intergenic |
| ACAACACAGAATTTCAAATG+AGG | 0.522251 | 3_2:-8255948 | None:intergenic |
| GCTTCAAAAGTAGAATTGAC+AGG | 0.524464 | 3_2:+8259969 | Msa0393950:exon |
| TATGTTAAAATCTTACCGGA+TGG | 0.533410 | 3_2:+8259998 | Msa0393950:three_prime_UTR |
| TGATGATGTTAGAGAACTAA+AGG | 0.538789 | 3_2:+8257186 | Msa0393950:CDS |
| GGACGTCACTCTACAAACTC+TGG | 0.539252 | 3_2:+8260330 | Msa0393950:three_prime_UTR |
| ACTCTACGAAATCCTGGGAT+CGG | 0.550289 | 3_2:-8258129 | None:intergenic |
| CTTGAAACTACATTTGAGGA+AGG | 0.550589 | 3_2:+8259916 | Msa0393950:CDS |
| AACAGTTATGTTATCTTACA+GGG | 0.557820 | 3_2:+8255833 | Msa0393950:five_prime_UTR |
| GTGGTTATTATCACATATAG+AGG | 0.558010 | 3_2:+8255921 | Msa0393950:five_prime_UTR |
| GATAAAACACAGGCAGAGAG+TGG | 0.567975 | 3_2:+8256134 | Msa0393950:CDS |
| TGCTTCTTCGGTCTGAACCA+AGG | 0.577590 | 3_2:+8260029 | Msa0393950:three_prime_UTR |
| AAAGCTGCACAACCGATCCC+AGG | 0.580477 | 3_2:+8258117 | Msa0393950:CDS |
| ATCTCTTGAAAGCAATGTAG+TGG | 0.582364 | 3_2:+8260408 | Msa0393950:three_prime_UTR |
| TCTCTTAAAATGATTCAAAG+TGG | 0.591059 | 3_2:+8260054 | Msa0393950:three_prime_UTR |
| CTGATTGCTATGAATCATCA+TGG | 0.598147 | 3_2:+8260528 | Msa0393950:three_prime_UTR |
| TACAAACTCTGGAGCAGCCG+CGG | 0.613220 | 3_2:+8260341 | Msa0393950:three_prime_UTR |
| GGAAATAATCAACTCAGCTG+TGG | 0.621226 | 3_2:+8258990 | Msa0393950:CDS |
| TGTGGCTGAGTATGTGGAGA+AGG | 0.630529 | 3_2:+8259008 | Msa0393950:CDS |
| TAAATCAAGTGTTTGAGGTG+TGG | 0.633895 | 3_2:+8255902 | Msa0393950:five_prime_UTR |
| CCTGATAACACAGAAGCAGT+AGG | 0.648015 | 3_2:-8257002 | None:intergenic |
| TGGTGTTCACCATCATTAGG+AGG | 0.649027 | 3_2:-8260189 | None:intergenic |
| GCTTGCAGATGATAAAACAC+AGG | 0.649255 | 3_2:+8256124 | Msa0393950:intron |
| ATCAATGCGTGAGAAAACAT+AGG | 0.655741 | 3_2:+8260309 | Msa0393950:three_prime_UTR |
| TGTCATCTAAGTGAAAATCA+CGG | 0.658079 | 3_2:+8260106 | Msa0393950:three_prime_UTR |
| GTAGTTCTCAAAATCAACCG+CGG | 0.706727 | 3_2:-8260358 | None:intergenic |
| AGCATGGGCACGGTGCAGCG+AGG | 0.712524 | 3_2:+8256208 | Msa0393950:CDS |
| TTCTGTCCAGATAAGCATCG+AGG | 0.718719 | 3_2:+8258041 | Msa0393950:intron |
| GGATTTCGTAGAGTAAAAGG+AGG | 0.718882 | 3_2:+8258138 | Msa0393950:CDS |
| AGTTATGTTATCTTACAGGG+TGG | 0.719636 | 3_2:+8255836 | Msa0393950:five_prime_UTR |
| CATCTAAGTGAAAATCACGG+TGG | 0.807475 | 3_2:+8260109 | Msa0393950:three_prime_UTR |
| TATCTGGAAACAGAACACTG+AGG | 0.863332 | 3_2:+8258064 | Msa0393950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTATTTTTTTAATTAT+AGG | + | chr3_2:8259548-8259567 | Msa0393950:intron | 0.0% |
| !!! | TATTATTATCATTTTCTATT+TGG | - | chr3_2:8258372-8258391 | None:intergenic | 10.0% |
| !! | AAATAGAAAATGATAATAAT+AGG | + | chr3_2:8258371-8258390 | Msa0393950:intron | 10.0% |
| !! | AACTATAAAAACATAAAAAT+AGG | - | chr3_2:8258626-8258645 | None:intergenic | 10.0% |
| !!! | TTGTTTAATATTTCATTTTC+CGG | + | chr3_2:8256772-8256791 | Msa0393950:intron | 15.0% |
| !! | ATAGCTGATAAAATTATAAA+TGG | + | chr3_2:8257330-8257349 | Msa0393950:intron | 15.0% |
| !! | TAGCTGATAAAATTATAAAT+GGG | + | chr3_2:8257331-8257350 | Msa0393950:intron | 15.0% |
| !!! | TATTTATGTGGATTTTAAAT+TGG | + | chr3_2:8258166-8258185 | Msa0393950:intron | 15.0% |
| !!! | AGAAGATTAATTCATTTTTA+TGG | + | chr3_2:8258879-8258898 | Msa0393950:intron | 15.0% |
| !!! | TTTCAAGTATTTTTTTTCAT+TGG | + | chr3_2:8259581-8259600 | Msa0393950:intron | 15.0% |
| !! | TTTATATGTTAAAATCTTAC+CGG | + | chr3_2:8259994-8260013 | Msa0393950:three_prime_UTR | 15.0% |
| !! | GGAAGAAAAAAACAATAAAA+AGG | - | chr3_2:8256057-8256076 | None:intergenic | 20.0% |
| !! | TTTGGATAAACAACTTAATT+AGG | + | chr3_2:8256365-8256384 | Msa0393950:intron | 20.0% |
| !! | TAATTTCAACTTAAATGAGA+AGG | + | chr3_2:8256717-8256736 | Msa0393950:intron | 20.0% |
| !! | CACAAAATAATGAGTAAATT+TGG | - | chr3_2:8256821-8256840 | None:intergenic | 20.0% |
| !! | TAACATGTAAATTATGATCT+AGG | - | chr3_2:8257075-8257094 | None:intergenic | 20.0% |
| !! | TGATAAAATTATAAATGGGA+CGG | + | chr3_2:8257335-8257354 | Msa0393950:intron | 20.0% |
| !! | TCTGAAAATGAGTTTATAAA+TGG | + | chr3_2:8257554-8257573 | Msa0393950:intron | 20.0% |
| !! | CTGAAAATGAGTTTATAAAT+GGG | + | chr3_2:8257555-8257574 | Msa0393950:intron | 20.0% |
| !! | TAAATTCTAAGTAGACTATA+TGG | + | chr3_2:8257630-8257649 | Msa0393950:intron | 20.0% |
| !! | TAAATATGATGTGTACATAA+CGG | - | chr3_2:8257764-8257783 | None:intergenic | 20.0% |
| !! | CTAAAAAAGTAAATAGTTTC+TGG | - | chr3_2:8258251-8258270 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTCCTTATATCAA+AGG | + | chr3_2:8258483-8258502 | Msa0393950:intron | 20.0% |
| !! | AAAGAAAGAAAACTTACATT+TGG | - | chr3_2:8258575-8258594 | None:intergenic | 20.0% |
| !!! | TTAATGTCTCTTTTAAAGTT+TGG | + | chr3_2:8258710-8258729 | Msa0393950:intron | 20.0% |
| !!! | ATGATTTTTCTTGAATTGTA+AGG | + | chr3_2:8258761-8258780 | Msa0393950:intron | 20.0% |
| !!! | TGATTTTTCTTGAATTGTAA+GGG | + | chr3_2:8258762-8258781 | Msa0393950:intron | 20.0% |
| !!! | GATAACTTGTTTAAAAACAT+TGG | - | chr3_2:8258968-8258987 | None:intergenic | 20.0% |
| !!! | TGTTTTTAAACAAGTTATCA+AGG | + | chr3_2:8258969-8258988 | Msa0393950:CDS | 20.0% |
| !! | GAAATACTATAATTAGCAAA+CGG | - | chr3_2:8259041-8259060 | None:intergenic | 20.0% |
| !!! | ACAATGTTTTAGTGTATATT+CGG | - | chr3_2:8260167-8260186 | None:intergenic | 20.0% |
| !!! | CTACAAAATGAATTTAACTT+TGG | + | chr3_2:8260377-8260396 | Msa0393950:three_prime_UTR | 20.0% |
| ! | TAACAGTTATGTTATCTTAC+AGG | + | chr3_2:8255832-8255851 | Msa0393950:five_prime_UTR | 25.0% |
| ! | AACAGTTATGTTATCTTACA+GGG | + | chr3_2:8255833-8255852 | Msa0393950:five_prime_UTR | 25.0% |
| ! | AAACAATAAAAAGGAGAAAG+AGG | - | chr3_2:8256048-8256067 | None:intergenic | 25.0% |
| !! | TTCTTGAATTAGGACATTTT+TGG | + | chr3_2:8256347-8256366 | Msa0393950:intron | 25.0% |
| !!! | CTTATTTCTATAAGTTCTGT+AGG | - | chr3_2:8256435-8256454 | None:intergenic | 25.0% |
| ! | AGATTATTTGAGAGAACTTA+CGG | - | chr3_2:8256493-8256512 | None:intergenic | 25.0% |
| !!! | GAGGGGTTTTTAATTAAAAT+AGG | + | chr3_2:8256587-8256606 | Msa0393950:intron | 25.0% |
| !! | ATAGTTTTCCACTTATGAAA+AGG | + | chr3_2:8256613-8256632 | Msa0393950:intron | 25.0% |
| !! | TATAAAGACCTTTTCATAAG+TGG | - | chr3_2:8256624-8256643 | None:intergenic | 25.0% |
| ! | CTTATGAAAAGGTCTTTATA+AGG | + | chr3_2:8256624-8256643 | Msa0393950:intron | 25.0% |
| ! | TATAAGGTTATAGATGTTCA+TGG | + | chr3_2:8256640-8256659 | Msa0393950:intron | 25.0% |
| ! | ATTTCTCAACATTAACTTAC+CGG | - | chr3_2:8256794-8256813 | None:intergenic | 25.0% |
| ! | TCAAATAAAAATCACATGCA+TGG | - | chr3_2:8256913-8256932 | None:intergenic | 25.0% |
| ! | TGAAATCCGTTTCTATTTAT+AGG | + | chr3_2:8256961-8256980 | Msa0393950:CDS | 25.0% |
| ! | GAAATCCGTTTCTATTTATA+GGG | + | chr3_2:8256962-8256981 | Msa0393950:CDS | 25.0% |
| ! | TTGTTCCCTATAAATAGAAA+CGG | - | chr3_2:8256970-8256989 | None:intergenic | 25.0% |
| ! | GATAAAATTATAAATGGGAC+GGG | + | chr3_2:8257336-8257355 | Msa0393950:intron | 25.0% |
| ! | ATAAAATTATAAATGGGACG+GGG | + | chr3_2:8257337-8257356 | Msa0393950:intron | 25.0% |
| !!! | TTACATATTCCATTTGGTTT+TGG | - | chr3_2:8257670-8257689 | None:intergenic | 25.0% |
| ! | TTCAACTTACATATTCCATT+TGG | - | chr3_2:8257676-8257695 | None:intergenic | 25.0% |
| ! | AATGTCAATCCTTTGATATA+AGG | - | chr3_2:8258495-8258514 | None:intergenic | 25.0% |
| ! | ATATTGCTGCAAAAAAATTG+AGG | + | chr3_2:8258533-8258552 | Msa0393950:intron | 25.0% |
| ! | AATGAAGACATGCATAAAAA+TGG | + | chr3_2:8258683-8258702 | Msa0393950:intron | 25.0% |
| ! | AGAAAAATCATGTCTTAACA+TGG | - | chr3_2:8258752-8258771 | None:intergenic | 25.0% |
| !! | GATTTTTCTTGAATTGTAAG+GGG | + | chr3_2:8258763-8258782 | Msa0393950:intron | 25.0% |
| !! | AATACACAGTTTAGTTTAAC+AGG | + | chr3_2:8258825-8258844 | Msa0393950:intron | 25.0% |
| !! | ACCAAAAGACATTTTATTAG+AGG | + | chr3_2:8258930-8258949 | Msa0393950:CDS | 25.0% |
| !! | ACCTCTAATAAAATGTCTTT+TGG | - | chr3_2:8258934-8258953 | None:intergenic | 25.0% |
| ! | ACTTGTTTAAAAACATTGGA+AGG | - | chr3_2:8258964-8258983 | None:intergenic | 25.0% |
| ! | AACATAGCTATGTAATTTAC+TGG | - | chr3_2:8259079-8259098 | None:intergenic | 25.0% |
| ! | AGAACATAAAAGATCACAAA+AGG | - | chr3_2:8259323-8259342 | None:intergenic | 25.0% |
| ! | TGACAAATTTGAATGTGTAT+TGG | - | chr3_2:8259422-8259441 | None:intergenic | 25.0% |
| ! | AGAAGGATATAAACCAATAA+TGG | - | chr3_2:8259450-8259469 | None:intergenic | 25.0% |
| !!! | ATTATTGGTTTATATCCTTC+TGG | + | chr3_2:8259449-8259468 | Msa0393950:intron | 25.0% |
| !!! | TTTTTAGTACAGTTAGTGTT+TGG | + | chr3_2:8259474-8259493 | Msa0393950:intron | 25.0% |
| ! | ACAGTGAAGATTTAATTGAA+TGG | - | chr3_2:8259512-8259531 | None:intergenic | 25.0% |
| !! | TTTTGCTTGTTCTGTTAAAA+CGG | + | chr3_2:8259817-8259836 | Msa0393950:intron | 25.0% |
| !!! | AATCATTTTAAGAGATTCCT+TGG | - | chr3_2:8260049-8260068 | None:intergenic | 25.0% |
| ! | TCTCTTAAAATGATTCAAAG+TGG | + | chr3_2:8260054-8260073 | Msa0393950:three_prime_UTR | 25.0% |
| !! | TTTTCAGCATGCATATTTTA+AGG | + | chr3_2:8260268-8260287 | Msa0393950:three_prime_UTR | 25.0% |
| !! | AATGTAGTGGTATTTTCTTT+TGG | + | chr3_2:8260421-8260440 | Msa0393950:three_prime_UTR | 25.0% |
| TTGCTTAAATCAAGTGTTTG+AGG | + | chr3_2:8255897-8255916 | Msa0393950:five_prime_UTR | 30.0% | |
| GTGGTTATTATCACATATAG+AGG | + | chr3_2:8255921-8255940 | Msa0393950:five_prime_UTR | 30.0% | |
| ACAACACAGAATTTCAAATG+AGG | - | chr3_2:8255951-8255970 | None:intergenic | 30.0% | |
| ! | CATTTTAAATCTAACTCCAC+AGG | + | chr3_2:8256012-8256031 | Msa0393950:CDS | 30.0% |
| TAAAAAGGAGAAAGAGGAAA+AGG | - | chr3_2:8256042-8256061 | None:intergenic | 30.0% | |
| TACCATAAAGAACAAGACAA+CGG | - | chr3_2:8256078-8256097 | None:intergenic | 30.0% | |
| !!! | GTGGAAGATTTTGTTTTGTA+TGG | + | chr3_2:8256153-8256172 | Msa0393950:CDS | 30.0% |
| GAACGTGATATTCTTGAATT+AGG | + | chr3_2:8256337-8256356 | Msa0393950:intron | 30.0% | |
| AATAAGCAGAAAACAACTCA+TGG | + | chr3_2:8256449-8256468 | Msa0393950:intron | 30.0% | |
| TATAATCCAAACAGTTCTGT+AGG | + | chr3_2:8256537-8256556 | Msa0393950:intron | 30.0% | |
| GCTTAAAGCTAATCCAAAAA+GGG | - | chr3_2:8256563-8256582 | None:intergenic | 30.0% | |
| AGCTTAAAGCTAATCCAAAA+AGG | - | chr3_2:8256564-8256583 | None:intergenic | 30.0% | |
| !! | GATTAGCTTTAAGCTTATGA+GGG | + | chr3_2:8256569-8256588 | Msa0393950:intron | 30.0% |
| !! | ATTAGCTTTAAGCTTATGAG+GGG | + | chr3_2:8256570-8256589 | Msa0393950:intron | 30.0% |
| ATGTTCATGGAGAAGTTAAA+CGG | + | chr3_2:8256653-8256672 | Msa0393950:intron | 30.0% | |
| GTTCAAAAACTTCATAGTTG+TGG | + | chr3_2:8256744-8256763 | Msa0393950:intron | 30.0% | |
| ! | TGATGATGTTAGAGAACTAA+AGG | + | chr3_2:8257186-8257205 | Msa0393950:CDS | 30.0% |
| ACGTTTAAATAGTAAGAGAG+AGG | + | chr3_2:8257231-8257250 | Msa0393950:intron | 30.0% | |
| CGTTTAAATAGTAAGAGAGA+GGG | + | chr3_2:8257232-8257251 | Msa0393950:intron | 30.0% | |
| GGAGAAAAATCATAGAAGAT+AGG | + | chr3_2:8257265-8257284 | Msa0393950:intron | 30.0% | |
| AATCATAGAAGATAGGCAAA+AGG | + | chr3_2:8257272-8257291 | Msa0393950:intron | 30.0% | |
| ATCATAGAAGATAGGCAAAA+GGG | + | chr3_2:8257273-8257292 | Msa0393950:intron | 30.0% | |
| AAAACCAACTTCTATAGTGA+GGG | - | chr3_2:8257374-8257393 | None:intergenic | 30.0% | |
| !!! | ACTATAGAAGTTGGTTTTGT+TGG | + | chr3_2:8257376-8257395 | Msa0393950:intron | 30.0% |
| TTCTAGCCATCTTATAACTT+CGG | - | chr3_2:8257418-8257437 | None:intergenic | 30.0% | |
| ! | ATGTGGATTTTAAATTGGCA+TGG | + | chr3_2:8258171-8258190 | Msa0393950:intron | 30.0% |
| ACGTTAGTAGATATCATGAA+AGG | + | chr3_2:8258286-8258305 | Msa0393950:intron | 30.0% | |
| !! | TAGATATCATGAAAGGTACT+TGG | + | chr3_2:8258293-8258312 | Msa0393950:intron | 30.0% |
| !! | AGATATCATGAAAGGTACTT+GGG | + | chr3_2:8258294-8258313 | Msa0393950:intron | 30.0% |
| ! | AATATCTGGTTAGTCAAACT+TGG | - | chr3_2:8258326-8258345 | None:intergenic | 30.0% |
| ATGATTATTATCAGACTTGC+TGG | - | chr3_2:8258408-8258427 | None:intergenic | 30.0% | |
| ! | ATGTAAAGTACAAAGTACTC+TGG | - | chr3_2:8259177-8259196 | None:intergenic | 30.0% |
| ! | AAGGAAAAACTGACAGATTT+TGG | - | chr3_2:8259304-8259323 | None:intergenic | 30.0% |
| ATTTGTCACATCACCATTAT+TGG | + | chr3_2:8259434-8259453 | Msa0393950:intron | 30.0% | |
| ACTGTACTAAAAAAACCAGA+AGG | - | chr3_2:8259467-8259486 | None:intergenic | 30.0% | |
| ! | AAAATACTTGAAAGAGCACA+TGG | - | chr3_2:8259574-8259593 | None:intergenic | 30.0% |
| ! | TGCTGATTGTAGAAAATAGT+GGG | - | chr3_2:8259758-8259777 | None:intergenic | 30.0% |
| ! | TTGCTGATTGTAGAAAATAG+TGG | - | chr3_2:8259759-8259778 | None:intergenic | 30.0% |
| AGATCTTGAAACTACATTTG+AGG | + | chr3_2:8259912-8259931 | Msa0393950:CDS | 30.0% | |
| TATGTTAAAATCTTACCGGA+TGG | + | chr3_2:8259998-8260017 | Msa0393950:three_prime_UTR | 30.0% | |
| TGTCATCTAAGTGAAAATCA+CGG | + | chr3_2:8260106-8260125 | Msa0393950:three_prime_UTR | 30.0% | |
| ! | CTTTTCATAAACTGAAACTG+TGG | - | chr3_2:8260212-8260231 | None:intergenic | 30.0% |
| AATACTATTTGAACGCACTT+TGG | - | chr3_2:8260485-8260504 | None:intergenic | 30.0% | |
| AGTTATGTTATCTTACAGGG+TGG | + | chr3_2:8255836-8255855 | Msa0393950:five_prime_UTR | 35.0% | |
| ! | TAAATCAAGTGTTTGAGGTG+TGG | + | chr3_2:8255902-8255921 | Msa0393950:five_prime_UTR | 35.0% |
| ! | TTCCGTTGTCTTGTTCTTTA+TGG | + | chr3_2:8256073-8256092 | Msa0393950:intron | 35.0% |
| !! | TTCTGTCTTTCTTTGAAGCA+TGG | + | chr3_2:8256192-8256211 | Msa0393950:CDS | 35.0% |
| !! | TCTGTCTTTCTTTGAAGCAT+GGG | + | chr3_2:8256193-8256212 | Msa0393950:CDS | 35.0% |
| ATACTATGTAACATGACCTG+AGG | + | chr3_2:8256305-8256324 | Msa0393950:intron | 35.0% | |
| TACTATGTAACATGACCTGA+GGG | + | chr3_2:8256306-8256325 | Msa0393950:intron | 35.0% | |
| !! | GGATTAGCTTTAAGCTTATG+AGG | + | chr3_2:8256568-8256587 | Msa0393950:intron | 35.0% |
| TGTTCATGGAGAAGTTAAAC+GGG | + | chr3_2:8256654-8256673 | Msa0393950:intron | 35.0% | |
| TCACATTCTTTGATTGCTCA+GGG | + | chr3_2:8256867-8256886 | Msa0393950:intron | 35.0% | |
| ! | AATTTCTTCTGCTCGTTTTG+AGG | + | chr3_2:8257138-8257157 | Msa0393950:CDS | 35.0% |
| TTAAATAGTAAGAGAGAGGG+AGG | + | chr3_2:8257235-8257254 | Msa0393950:intron | 35.0% | |
| TAAATAGTAAGAGAGAGGGA+GGG | + | chr3_2:8257236-8257255 | Msa0393950:intron | 35.0% | |
| ! | AGGGAATCAAAGGCATAATA+CGG | + | chr3_2:8257292-8257311 | Msa0393950:intron | 35.0% |
| CAAAACCAACTTCTATAGTG+AGG | - | chr3_2:8257375-8257394 | None:intergenic | 35.0% | |
| AAAGTCCATCAAAGATCCAT+TGG | + | chr3_2:8257436-8257455 | Msa0393950:intron | 35.0% | |
| AAGTCCATCAAAGATCCATT+GGG | + | chr3_2:8257437-8257456 | Msa0393950:intron | 35.0% | |
| AATCCTACCAAATAGACTTG+TGG | - | chr3_2:8257595-8257614 | None:intergenic | 35.0% | |
| TGAGTTAGACCAAAACCAAA+TGG | + | chr3_2:8257658-8257677 | Msa0393950:intron | 35.0% | |
| ! | TAAGTTGAAGTACAGCTGAT+TGG | + | chr3_2:8257687-8257706 | Msa0393950:intron | 35.0% |
| GTCATCACATCTAACTTCTA+AGG | + | chr3_2:8257964-8257983 | Msa0393950:intron | 35.0% | |
| CGATGATGTGTTTCAGAAAA+TGG | + | chr3_2:8258092-8258111 | Msa0393950:CDS | 35.0% | |
| ! | CTTTTACTCTACGAAATCCT+GGG | - | chr3_2:8258137-8258156 | None:intergenic | 35.0% |
| ! | AAGGAGGTGAAGTATTTATG+TGG | + | chr3_2:8258154-8258173 | Msa0393950:intron | 35.0% |
| ! | TGTTCTCTTTTCCTTTGCTA+AGG | - | chr3_2:8258217-8258236 | None:intergenic | 35.0% |
| !! | GATATCATGAAAGGTACTTG+GGG | + | chr3_2:8258295-8258314 | Msa0393950:intron | 35.0% |
| ! | TTCGAAAGAAAACCGTTTTG+AGG | - | chr3_2:8258458-8258477 | None:intergenic | 35.0% |
| CAAAAAAATTGAGGACAACC+AGG | + | chr3_2:8258542-8258561 | Msa0393950:intron | 35.0% | |
| !!! | GACATTTTATTAGAGGTGCT+TGG | + | chr3_2:8258937-8258956 | Msa0393950:CDS | 35.0% |
| AGAACATCTTCTGTTGTCTA+AGG | + | chr3_2:8259273-8259292 | Msa0393950:intron | 35.0% | |
| TGTGTATTGGAAACCCTATT+CGG | - | chr3_2:8259409-8259428 | None:intergenic | 35.0% | |
| !! | CACAAAGTGTTGTCAAATAG+TGG | + | chr3_2:8259688-8259707 | Msa0393950:intron | 35.0% |
| TTGTCAAATAGTGGCTATAG+CGG | + | chr3_2:8259697-8259716 | Msa0393950:intron | 35.0% | |
| CTGTTAAAACGGATATTTGC+TGG | + | chr3_2:8259828-8259847 | Msa0393950:intron | 35.0% | |
| TTTGCTGGAAAATTCTTTGC+AGG | + | chr3_2:8259843-8259862 | Msa0393950:intron | 35.0% | |
| CTTGAAACTACATTTGAGGA+AGG | + | chr3_2:8259916-8259935 | Msa0393950:CDS | 35.0% | |
| GCTTCAAAAGTAGAATTGAC+AGG | + | chr3_2:8259969-8259988 | Msa0393950:exon | 35.0% | |
| ACATTGTTTCCTCCTAATGA+TGG | + | chr3_2:8260180-8260199 | Msa0393950:three_prime_UTR | 35.0% | |
| ! | TATGTTTTCTCACGCATTGA+TGG | - | chr3_2:8260310-8260329 | None:intergenic | 35.0% |
| ATCAATGCGTGAGAAAACAT+AGG | + | chr3_2:8260309-8260328 | Msa0393950:three_prime_UTR | 35.0% | |
| ATCTCTTGAAAGCAATGTAG+TGG | + | chr3_2:8260408-8260427 | Msa0393950:three_prime_UTR | 35.0% | |
| CTGATTGCTATGAATCATCA+TGG | + | chr3_2:8260528-8260547 | Msa0393950:three_prime_UTR | 35.0% | |
| GGAGAAACACAAATGTTCTT+TGG | - | chr3_2:8260566-8260585 | None:intergenic | 35.0% | |
| GAACATTTGTGTTTCTCCAT+AGG | + | chr3_2:8260568-8260587 | Msa0393950:three_prime_UTR | 35.0% | |
| AAGAGGAAAAGGTTAACCTG+TGG | - | chr3_2:8256031-8256050 | None:intergenic | 40.0% | |
| GCTTGCAGATGATAAAACAC+AGG | + | chr3_2:8256124-8256143 | Msa0393950:intron | 40.0% | |
| CTCACATTCTTTGATTGCTC+AGG | + | chr3_2:8256866-8256885 | Msa0393950:intron | 40.0% | |
| GCAGACAGAGAAAGAAAAAC+TGG | - | chr3_2:8257030-8257049 | None:intergenic | 40.0% | |
| GATAGGCAAAAGGGAATCAA+AGG | + | chr3_2:8257282-8257301 | Msa0393950:intron | 40.0% | |
| ! | GAATCAAAGGCATAATACGG+TGG | + | chr3_2:8257295-8257314 | Msa0393950:intron | 40.0% |
| TTATAAATGGGACGGGGTTA+TGG | + | chr3_2:8257343-8257362 | Msa0393950:intron | 40.0% | |
| TCAACCCTCACTATAGAAGT+TGG | + | chr3_2:8257367-8257386 | Msa0393950:intron | 40.0% | |
| GCCATCTTATAACTTCGGTT+GGG | - | chr3_2:8257413-8257432 | None:intergenic | 40.0% | |
| AGCCATCTTATAACTTCGGT+TGG | - | chr3_2:8257414-8257433 | None:intergenic | 40.0% | |
| GTGTGTTACGAGTTCTACAT+TGG | + | chr3_2:8257520-8257539 | Msa0393950:intron | 40.0% | |
| CAAATAGACTTGTGGAGAGA+GGG | - | chr3_2:8257587-8257606 | None:intergenic | 40.0% | |
| TCTCCACAAGTCTATTTGGT+AGG | + | chr3_2:8257589-8257608 | Msa0393950:intron | 40.0% | |
| TTGAAGTACAGCTGATTGGT+AGG | + | chr3_2:8257691-8257710 | Msa0393950:intron | 40.0% | |
| CGACAAAAGATCGAATTGCA+AGG | + | chr3_2:8257865-8257884 | Msa0393950:intron | 40.0% | |
| TATCTGGAAACAGAACACTG+AGG | + | chr3_2:8258064-8258083 | Msa0393950:CDS | 40.0% | |
| ! | CCTTTTACTCTACGAAATCC+TGG | - | chr3_2:8258138-8258157 | None:intergenic | 40.0% |
| CCAGGATTTCGTAGAGTAAA+AGG | + | chr3_2:8258135-8258154 | Msa0393950:CDS | 40.0% | |
| GGATTTCGTAGAGTAAAAGG+AGG | + | chr3_2:8258138-8258157 | Msa0393950:CDS | 40.0% | |
| ! | CAGATTGATAGCCTTAGCAA+AGG | + | chr3_2:8258203-8258222 | Msa0393950:intron | 40.0% |
| GACTAACCAGATATTACGTG+CGG | + | chr3_2:8258331-8258350 | Msa0393950:intron | 40.0% | |
| AAACTTCCGCACGTAATATC+TGG | - | chr3_2:8258340-8258359 | None:intergenic | 40.0% | |
| !!! | ATCAGACTTGCTGGTGATTT+TGG | - | chr3_2:8258399-8258418 | None:intergenic | 40.0% |
| TGTCATCTGACTCCTCAAAA+CGG | + | chr3_2:8258443-8258462 | Msa0393950:intron | 40.0% | |
| ! | GACATTTTTCACGTGCTTCT+TGG | + | chr3_2:8258509-8258528 | Msa0393950:intron | 40.0% |
| ! | CTTACATTTGGCGTTTTTCC+TGG | - | chr3_2:8258563-8258582 | None:intergenic | 40.0% |
| ! | TTCATTGATACACACCGACT+TGG | - | chr3_2:8258669-8258688 | None:intergenic | 40.0% |
| GGAAATAATCAACTCAGCTG+TGG | + | chr3_2:8258990-8259009 | Msa0393950:CDS | 40.0% | |
| !! | ACCATGCTTGCTATTACACA+AGG | + | chr3_2:8259144-8259163 | Msa0393950:intron | 40.0% |
| TCCTTGTGTAATAGCAAGCA+TGG | - | chr3_2:8259148-8259167 | None:intergenic | 40.0% | |
| ATGCTACCTAAAAGGCTTCA+AGG | - | chr3_2:8259217-8259236 | None:intergenic | 40.0% | |
| !! | GAAGCCTTTTAGGTAGCATT+TGG | + | chr3_2:8259218-8259237 | Msa0393950:intron | 40.0% |
| ACATCTTCTGTTGTCTAAGG+TGG | + | chr3_2:8259276-8259295 | Msa0393950:intron | 40.0% | |
| AAATATCCTGCCTACCGAAT+AGG | + | chr3_2:8259392-8259411 | Msa0393950:intron | 40.0% | |
| AATATCCTGCCTACCGAATA+GGG | + | chr3_2:8259393-8259412 | Msa0393950:intron | 40.0% | |
| TATTGGAAACCCTATTCGGT+AGG | - | chr3_2:8259405-8259424 | None:intergenic | 40.0% | |
| TGGTCAGAGTTGTCAAATAG+TGG | + | chr3_2:8259601-8259620 | Msa0393950:intron | 40.0% | |
| GCTATAGCACTATAGTACAG+TGG | + | chr3_2:8259625-8259644 | Msa0393950:intron | 40.0% | |
| ! | TTTGTGCTGATGGCATATAG+CGG | - | chr3_2:8259674-8259693 | None:intergenic | 40.0% |
| TTGACAACACTTTGTGCTGA+TGG | - | chr3_2:8259684-8259703 | None:intergenic | 40.0% | |
| ATGGAGTGACATTGCTTCTT+CGG | + | chr3_2:8260017-8260036 | Msa0393950:three_prime_UTR | 40.0% | |
| CATCTAAGTGAAAATCACGG+TGG | + | chr3_2:8260109-8260128 | Msa0393950:three_prime_UTR | 40.0% | |
| GTAGTTCTCAAAATCAACCG+CGG | - | chr3_2:8260361-8260380 | None:intergenic | 40.0% | |
| GATAAAACACAGGCAGAGAG+TGG | + | chr3_2:8256134-8256153 | Msa0393950:CDS | 45.0% | |
| !! | CTTTCTTTGAAGCATGGGCA+CGG | + | chr3_2:8256198-8256217 | Msa0393950:CDS | 45.0% |
| !! | GTGCAGCGAGGATTTTGAAA+AGG | + | chr3_2:8256220-8256239 | Msa0393950:CDS | 45.0% |
| AAAGGGCCTACAGAACTGTT+TGG | - | chr3_2:8256546-8256565 | None:intergenic | 45.0% | |
| ! | ACAGTTCTGTAGGCCCTTTT+TGG | + | chr3_2:8256547-8256566 | Msa0393950:intron | 45.0% |
| GAGAAGTTAAACGGGACTAC+AGG | + | chr3_2:8256662-8256681 | Msa0393950:intron | 45.0% | |
| CCTGATAACACAGAAGCAGT+AGG | - | chr3_2:8257005-8257024 | None:intergenic | 45.0% | |
| CCTACTGCTTCTGTGTTATC+AGG | + | chr3_2:8257002-8257021 | Msa0393950:CDS | 45.0% | |
| GCCCAACCGAAGTTATAAGA+TGG | + | chr3_2:8257409-8257428 | Msa0393950:intron | 45.0% | |
| GTGTCCCAATGGATCTTTGA+TGG | - | chr3_2:8257444-8257463 | None:intergenic | 45.0% | |
| CCAAATAGACTTGTGGAGAG+AGG | - | chr3_2:8257588-8257607 | None:intergenic | 45.0% | |
| CCTCTCTCCACAAGTCTATT+TGG | + | chr3_2:8257585-8257604 | Msa0393950:intron | 45.0% | |
| ! | TTCTGTCCAGATAAGCATCG+AGG | + | chr3_2:8258041-8258060 | Msa0393950:intron | 45.0% |
| CAGATACCTCGATGCTTATC+TGG | - | chr3_2:8258050-8258069 | None:intergenic | 45.0% | |
| !! | CAGATAAGCATCGAGGTATC+TGG | + | chr3_2:8258048-8258067 | Msa0393950:intron | 45.0% |
| ACTCTACGAAATCCTGGGAT+CGG | - | chr3_2:8258132-8258151 | None:intergenic | 45.0% | |
| ! | ACGTGCGGAAGTTTTCTGTT+TGG | + | chr3_2:8258346-8258365 | Msa0393950:intron | 45.0% |
| !! | ATTGATACACACCGACTTGG+TGG | - | chr3_2:8258666-8258685 | None:intergenic | 45.0% |
| AAAAGGCTTCAAGGTGGCTA+TGG | - | chr3_2:8259208-8259227 | None:intergenic | 45.0% | |
| ! | TAGCCACCTTGAAGCCTTTT+AGG | + | chr3_2:8259208-8259227 | Msa0393950:intron | 45.0% |
| CTACCTAAAAGGCTTCAAGG+TGG | - | chr3_2:8259214-8259233 | None:intergenic | 45.0% | |
| CACGCCAAATGCTACCTAAA+AGG | - | chr3_2:8259225-8259244 | None:intergenic | 45.0% | |
| AGAAGCAATGTCACTCCATC+CGG | - | chr3_2:8260016-8260035 | None:intergenic | 45.0% | |
| AAAATCACGGTGGCATTTCG+CGG | + | chr3_2:8260119-8260138 | Msa0393950:three_prime_UTR | 45.0% | |
| TGGTGTTCACCATCATTAGG+AGG | - | chr3_2:8260192-8260211 | None:intergenic | 45.0% | |
| CTGTGGTGTTCACCATCATT+AGG | - | chr3_2:8260195-8260214 | None:intergenic | 45.0% | |
| CACATGCATGGTGACATGTG+AGG | - | chr3_2:8256901-8256920 | None:intergenic | 50.0% | |
| ATAGTAAGAGAGAGGGAGGG+AGG | + | chr3_2:8257239-8257258 | Msa0393950:intron | 50.0% | |
| TAGTAAGAGAGAGGGAGGGA+GGG | + | chr3_2:8257240-8257259 | Msa0393950:intron | 50.0% | |
| TCCATTGGGACACCCACTAT+CGG | + | chr3_2:8257451-8257470 | Msa0393950:intron | 50.0% | |
| TGCTCCAGATGTCCAATCCT+AGG | + | chr3_2:8257487-8257506 | Msa0393950:intron | 50.0% | |
| ATGTCCAATCCTAGGCGTGA+GGG | + | chr3_2:8257495-8257514 | Msa0393950:intron | 50.0% | |
| AGCAACCTTGACCACCAAGT+CGG | + | chr3_2:8258652-8258671 | Msa0393950:intron | 50.0% | |
| TGTGGCTGAGTATGTGGAGA+AGG | + | chr3_2:8259008-8259027 | Msa0393950:CDS | 50.0% | |
| TGCTTCTTCGGTCTGAACCA+AGG | + | chr3_2:8260029-8260048 | Msa0393950:three_prime_UTR | 50.0% | |
| GGACGTCACTCTACAAACTC+TGG | + | chr3_2:8260330-8260349 | Msa0393950:three_prime_UTR | 50.0% | |
| GTAACATGACCTGAGGGCTG+AGG | + | chr3_2:8256312-8256331 | Msa0393950:intron | 55.0% | |
| CCATTGGGACACCCACTATC+GGG | + | chr3_2:8257452-8257471 | Msa0393950:intron | 55.0% | |
| CACGCCTAGGATTGGACATC+TGG | - | chr3_2:8257494-8257513 | None:intergenic | 55.0% | |
| GATGTCCAATCCTAGGCGTG+AGG | + | chr3_2:8257494-8257513 | Msa0393950:intron | 55.0% | |
| TGTCCAATCCTAGGCGTGAG+GGG | + | chr3_2:8257496-8257515 | Msa0393950:intron | 55.0% | |
| AAAGCTGCACAACCGATCCC+AGG | + | chr3_2:8258117-8258136 | Msa0393950:CDS | 55.0% | |
| !! | ACACACCGACTTGGTGGTCA+AGG | - | chr3_2:8258660-8258679 | None:intergenic | 55.0% |
| CTCAGCTGTGGCTGAGTATG+TGG | + | chr3_2:8259002-8259021 | Msa0393950:CDS | 55.0% | |
| GGAAACCCTATTCGGTAGGC+AGG | - | chr3_2:8259401-8259420 | None:intergenic | 55.0% | |
| !! | TACAAACTCTGGAGCAGCCG+CGG | + | chr3_2:8260341-8260360 | Msa0393950:three_prime_UTR | 55.0% |
| TAAGAGAGAGGGAGGGAGGG+AGG | + | chr3_2:8257243-8257262 | Msa0393950:intron | 60.0% | |
| AAGAGAGAGGGAGGGAGGGA+GGG | + | chr3_2:8257244-8257263 | Msa0393950:intron | 60.0% | |
| !! | CCCGATAGTGGGTGTCCCAA+TGG | - | chr3_2:8257455-8257474 | None:intergenic | 60.0% |
| GACCTGAGCAGCCCGATAGT+GGG | - | chr3_2:8257466-8257485 | None:intergenic | 60.0% | |
| TGACCTGAGCAGCCCGATAG+TGG | - | chr3_2:8257467-8257486 | None:intergenic | 60.0% | |
| ACACCCCTCACGCCTAGGAT+TGG | - | chr3_2:8257502-8257521 | None:intergenic | 60.0% | |
| AACACACACCCCTCACGCCT+AGG | - | chr3_2:8257507-8257526 | None:intergenic | 60.0% | |
| CACGTTCAGCCTCAGCCCTC+AGG | - | chr3_2:8256324-8256343 | None:intergenic | 65.0% | |
| CACCCACTATCGGGCTGCTC+AGG | + | chr3_2:8257461-8257480 | Msa0393950:intron | 65.0% | |
| AGCATGGGCACGGTGCAGCG+AGG | + | chr3_2:8256208-8256227 | Msa0393950:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 8255825 | 8260594 | 8255825 | ID=Msa0393950;Name=Msa0393950 |
| chr3_2 | mRNA | 8255825 | 8260594 | 8255825 | ID=Msa0393950-mRNA-1;Parent=Msa0393950;Name=Msa0393950-mRNA-1;_AED=0.17;_eAED=0.17;_QI=164|0.71|0.62|1|0.57|0.62|8|613|226 |
| chr3_2 | exon | 8255825 | 8256033 | 8255825 | ID=Msa0393950-mRNA-1:exon:2143;Parent=Msa0393950-mRNA-1 |
| chr3_2 | exon | 8256132 | 8256268 | 8256132 | ID=Msa0393950-mRNA-1:exon:2144;Parent=Msa0393950-mRNA-1 |
| chr3_2 | exon | 8256953 | 8257023 | 8256953 | ID=Msa0393950-mRNA-1:exon:2145;Parent=Msa0393950-mRNA-1 |
| chr3_2 | exon | 8257131 | 8257207 | 8257131 | ID=Msa0393950-mRNA-1:exon:2146;Parent=Msa0393950-mRNA-1 |
| chr3_2 | exon | 8258051 | 8258159 | 8258051 | ID=Msa0393950-mRNA-1:exon:2147;Parent=Msa0393950-mRNA-1 |
| chr3_2 | exon | 8258555 | 8258577 | 8258555 | ID=Msa0393950-mRNA-1:exon:2148;Parent=Msa0393950-mRNA-1 |
| chr3_2 | exon | 8258928 | 8259029 | 8258928 | ID=Msa0393950-mRNA-1:exon:2149;Parent=Msa0393950-mRNA-1 |
| chr3_2 | exon | 8259865 | 8260594 | 8259865 | ID=Msa0393950-mRNA-1:exon:2150;Parent=Msa0393950-mRNA-1 |
| chr3_2 | five_prime_UTR | 8255825 | 8255988 | 8255825 | ID=Msa0393950-mRNA-1:five_prime_utr;Parent=Msa0393950-mRNA-1 |
| chr3_2 | CDS | 8255989 | 8256033 | 8255989 | ID=Msa0393950-mRNA-1:cds;Parent=Msa0393950-mRNA-1 |
| chr3_2 | CDS | 8256132 | 8256268 | 8256132 | ID=Msa0393950-mRNA-1:cds;Parent=Msa0393950-mRNA-1 |
| chr3_2 | CDS | 8256953 | 8257023 | 8256953 | ID=Msa0393950-mRNA-1:cds;Parent=Msa0393950-mRNA-1 |
| chr3_2 | CDS | 8257131 | 8257207 | 8257131 | ID=Msa0393950-mRNA-1:cds;Parent=Msa0393950-mRNA-1 |
| chr3_2 | CDS | 8258051 | 8258159 | 8258051 | ID=Msa0393950-mRNA-1:cds;Parent=Msa0393950-mRNA-1 |
| chr3_2 | CDS | 8258555 | 8258577 | 8258555 | ID=Msa0393950-mRNA-1:cds;Parent=Msa0393950-mRNA-1 |
| chr3_2 | CDS | 8258928 | 8259029 | 8258928 | ID=Msa0393950-mRNA-1:cds;Parent=Msa0393950-mRNA-1 |
| chr3_2 | CDS | 8259865 | 8259981 | 8259865 | ID=Msa0393950-mRNA-1:cds;Parent=Msa0393950-mRNA-1 |
| chr3_2 | three_prime_UTR | 8259982 | 8260594 | 8259982 | ID=Msa0393950-mRNA-1:three_prime_utr;Parent=Msa0393950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
