AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1111700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111700 MtrunA17_Chr7g0245111 92.593 405 16 4 1 392 1 404 0.0 756
Msa1111700 MtrunA17_Chr7g0245111 77.616 411 36 5 397 755 3 409 0.0 619
Msa1111700 MtrunA17_Chr7g0245121 90.814 381 25 1 22 392 23 403 0.0 715
Msa1111700 MtrunA17_Chr7g0245121 82.195 410 21 2 396 755 1 408 0.0 642
Msa1111700 MtrunA17_Chr6g0478231 64.130 368 120 3 35 392 51 416 3.81e-171 498
Msa1111700 MtrunA17_Chr6g0478231 56.300 373 109 3 431 753 51 419 2.70e-140 419
Msa1111700 MtrunA17_Chr1g0188751 61.765 374 131 3 35 398 43 414 1.13e-166 486
Msa1111700 MtrunA17_Chr1g0188751 54.960 373 114 4 431 753 43 411 2.58e-138 414
Msa1111700 MtrunA17_Chr1g0188761 58.809 403 144 6 9 392 5 404 1.88e-165 483
Msa1111700 MtrunA17_Chr1g0188761 51.589 409 140 5 400 755 6 409 1.74e-137 411
Msa1111700 MtrunA17_Chr3g0128871 55.792 423 153 7 1 392 3 422 9.78e-154 454
Msa1111700 MtrunA17_Chr3g0128871 50.617 405 143 5 402 753 25 425 2.28e-125 381
Msa1111700 MtrunA17_Chr6g0485451 54.054 222 90 3 187 398 1 220 1.04e-74 241
Msa1111700 MtrunA17_Chr6g0485451 56.897 174 71 2 580 753 48 217 7.31e-61 204
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111700 AT5G08380.1 73.267 404 94 3 2 392 3 405 0.0 608
Msa1111700 AT5G08380.1 63.747 411 94 3 397 755 3 410 2.84e-178 516
Msa1111700 AT5G08370.1 60.660 394 136 5 16 399 10 394 2.89e-170 495
Msa1111700 AT5G08370.1 53.634 399 126 5 404 751 1 391 7.50e-141 420
Msa1111700 AT5G08370.2 63.539 373 121 4 37 399 1 368 3.94e-170 494
Msa1111700 AT5G08370.2 56.911 369 105 3 433 751 1 365 9.22e-141 419
Msa1111700 AT5G08380.2 75.478 314 64 2 2 302 3 316 2.09e-169 490
Msa1111700 AT5G08380.2 62.739 314 65 2 397 658 3 316 4.10e-128 384
Msa1111700 AT3G56310.1 57.963 383 146 4 23 392 46 426 2.43e-150 446
Msa1111700 AT3G56310.1 51.289 388 132 4 419 753 46 429 5.83e-124 378
Msa1111700 AT3G56310.2 54.308 383 136 5 23 392 46 402 6.78e-134 402
Msa1111700 AT3G56310.2 47.938 388 121 5 419 753 46 405 2.63e-108 337

Find 192 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAGGCTCCTCTTCTTCT+AGG 0.176848 7_3:+57431877 Msa1111700:intron
TTGCAGGCTCCTCTTCTTCT+AGG 0.179259 7_3:+57427216 Msa1111700:intron
ATATGGGCAGGTCCTCTTTC+AGG 0.182460 7_3:+57427723 Msa1111700:CDS
TTGGAAGCATTGTTGATAAT+TGG 0.188347 7_3:+57432810 Msa1111700:three_prime_UTR
GAGAAATGTATCCAGCTTTA+TGG 0.197296 7_3:+57426586 Msa1111700:CDS
TGGTGACCCTCTTCCATATT+TGG 0.201313 7_3:+57424698 Msa1111700:CDS
ATATGGGCAGGTCCTCTTTC+AGG 0.213190 7_3:+57432364 Msa1111700:CDS
TTGCTTAATAAAGGCATTTC+AGG 0.236059 7_3:+57432406 Msa1111700:CDS
AGATTAATATAACAGCTAAT+TGG 0.255482 7_3:+57432437 Msa1111700:CDS
TGTGTCACTGCTTCATCATT+AGG 0.260692 7_3:+57424727 Msa1111700:CDS
TGTGTCACTGCTTCATCATT+AGG 0.260692 7_3:+57429506 Msa1111700:CDS
ACTTGGCGTACAAGCTAAAA+AGG 0.261316 7_3:+57432061 Msa1111700:CDS
CTTGGAGATAGTTTCTAATA+AGG 0.289560 7_3:+57431930 Msa1111700:CDS
ATATTGATATAACAGCTAAT+TGG 0.300144 7_3:+57427790 Msa1111700:CDS
GTTACTTAGATTGCAGCTTT+TGG 0.303373 7_3:+57432791 Msa1111700:three_prime_UTR
GCTTCTGAAGGCCTCTATTA+AGG 0.306135 7_3:-57427767 None:intergenic
TTCTCTAGGTCATGAGTTCC+AGG 0.308747 7_3:+57426080 Msa1111700:CDS
ATTTGAGATGGTGGTGGTTT+TGG 0.309054 7_3:+57429457 Msa1111700:CDS
AACTATCTCCAAGGTCTCTT+TGG 0.311512 7_3:-57431920 None:intergenic
TGACACAAACCAACCAAATA+TGG 0.315110 7_3:-57424711 None:intergenic
TACCCATGATGCAAAGGTTT+TGG 0.317149 7_3:-57430559 None:intergenic
TACCCATGATGCAAAAGTTT+TGG 0.317269 7_3:-57426106 None:intergenic
TGAACTTAATCGCGATAATA+AGG 0.322256 7_3:+57425741 Msa1111700:CDS
GTGTCACTGCTTCATCATTA+GGG 0.339417 7_3:+57424728 Msa1111700:CDS
GTGTCACTGCTTCATCATTA+GGG 0.339417 7_3:+57429507 Msa1111700:CDS
TTTCCAACCTCAAGCATATC+AGG 0.349661 7_3:-57431514 None:intergenic
AACTATATTATAGGGTAATC+TGG 0.353930 7_3:+57430303 Msa1111700:intron
CATGGAGATAGTCTCTAATA+AGG 0.359543 7_3:+57427269 Msa1111700:CDS
CATTGATGCAGATGATTGTT+GGG 0.365443 7_3:+57430156 Msa1111700:intron
AAGAAATCAACATTTCCTTC+TGG 0.375662 7_3:+57425883 Msa1111700:CDS
AAGAAATCAACATTTCCTTC+TGG 0.375662 7_3:+57430331 Msa1111700:CDS
TTGTTCAAGCAAGAGACCTT+TGG 0.381720 7_3:+57432488 Msa1111700:CDS
TGTCTGTGAGATGGTGGTTT+TGG 0.382248 7_3:+57424678 Msa1111700:CDS
TTGTCCAAGCAAGAGACCTT+TGG 0.388653 7_3:+57427841 Msa1111700:CDS
CATAGCAAGGGTCTTAAACT+TGG 0.389120 7_3:+57425931 Msa1111700:CDS
GAAACACTGATCCGAGAAAC+TGG 0.392281 7_3:+57429848 Msa1111700:CDS
CTGATGACATAAATGATTCA+TGG 0.392813 7_3:+57426640 Msa1111700:CDS
TGTTCAAGCAAGAGACCTTT+GGG 0.394528 7_3:+57432489 Msa1111700:CDS
GCTGTTGTGTTGCTTAATAA+AGG 0.396749 7_3:+57432397 Msa1111700:CDS
ATAAATGTCAACTTGTACAT+TGG 0.398174 7_3:+57432863 Msa1111700:three_prime_UTR
CATAGCAAGGGTCTTAAGAT+TGG 0.403888 7_3:+57430379 Msa1111700:CDS
CCTTGGTAGAACTCCTCCTA+TGG 0.406369 7_3:+57429577 Msa1111700:CDS
GCGTACAAGCTAAGAAAGTT+AGG 0.409733 7_3:+57427406 Msa1111700:CDS
AGAAATGTATCCAGCTTTAT+GGG 0.410094 7_3:+57426587 Msa1111700:CDS
AGGTCCTCTTTCAGGATATA+GGG 0.411330 7_3:+57432372 Msa1111700:CDS
GCTGATGCCCTTGTTTCAAC+TGG 0.414005 7_3:+57429991 Msa1111700:intron
CAGGTCCTCTTTCAGGATAT+AGG 0.414530 7_3:+57432371 Msa1111700:CDS
GATTAATATAACAGCTAATT+GGG 0.415016 7_3:+57432438 Msa1111700:CDS
TATTGATATAACAGCTAATT+GGG 0.420644 7_3:+57427791 Msa1111700:CDS
TGTCCAAGCAAGAGACCTTT+GGG 0.423545 7_3:+57427842 Msa1111700:CDS
TTGTTGCTGCAGATGATTGT+TGG 0.424018 7_3:+57425716 Msa1111700:intron
CCTTGGTAAAACTCCTCCTA+TGG 0.424348 7_3:+57424798 Msa1111700:CDS
CCGAGCAAATACCAGTTTGC+CGG 0.426356 7_3:-57425339 None:intergenic
GACCCTCTTCCATATTTGGT+TGG 0.430247 7_3:+57424702 Msa1111700:CDS
TTAGCTGTTATATTAATCTT+CGG 0.431017 7_3:-57432433 None:intergenic
TCTCTCACTCTCACTGCAAC+TGG 0.432853 7_3:+57424607 Msa1111700:five_prime_UTR
GCTAAAGCACGAGTCATAAC+AGG 0.433773 7_3:-57426440 None:intergenic
TGTTGCTGCAGATGATTGTT+GGG 0.434134 7_3:+57425717 Msa1111700:intron
AGAAGAAACCTTCTTGCTAA+TGG 0.435698 7_3:+57424775 Msa1111700:CDS
AGAAGAAACCTTCTTGCTAA+TGG 0.435698 7_3:+57429554 Msa1111700:CDS
CTTGGAATTTATTCAGATGC+AGG 0.439895 7_3:+57425949 Msa1111700:CDS
AACCTTCTTGCTAATGGCCT+TGG 0.440891 7_3:+57424781 Msa1111700:CDS
AAACCAACCAAACATGCAAA+AGG 0.441393 7_3:-57429484 None:intergenic
CAGGTCCTCTTTCAGGAGAT+AGG 0.444331 7_3:+57427730 Msa1111700:CDS
AACCTTCTTGCTAATGGCCT+TGG 0.447496 7_3:+57429560 Msa1111700:CDS
TTTCCAACCTCAAGCATGTC+AGG 0.449534 7_3:-57426962 None:intergenic
TCTTCTAGAACTCATGCAAC+TGG 0.450734 7_3:-57432758 None:intergenic
TATCGTTCACTTCAGTTTGT+GGG 0.453208 7_3:+57431561 Msa1111700:CDS
ATATCGTTCACTTCAGTTTG+TGG 0.453875 7_3:+57431560 Msa1111700:CDS
AGCTTTATGGGGTGCTAAAG+TGG 0.461428 7_3:+57426599 Msa1111700:CDS
ATTGGAATTTATTCAGATGC+AGG 0.462751 7_3:+57430397 Msa1111700:CDS
CCTCCCAAAGGTCTCTTGCT+TGG 0.464465 7_3:-57427845 None:intergenic
TGCCAAAACCTTTGCATCAT+GGG 0.465099 7_3:+57430557 Msa1111700:CDS
AGCATGCAAGACCTGGTGGC+TGG 0.466104 7_3:+57426825 Msa1111700:CDS
GTGCTAAAGTGGGAAATAGT+TGG 0.469009 7_3:+57426610 Msa1111700:CDS
TGTTGTACCTATGTTAACAT+AGG 0.471345 7_3:-57425592 None:intergenic
TACCAAGGCCATTAGCAAGA+AGG 0.473441 7_3:-57424783 None:intergenic
TCATTGATGCAGATGATTGT+TGG 0.476338 7_3:+57430155 Msa1111700:intron
CTTGGTAGAACTCCTCCTAT+GGG 0.479296 7_3:+57429578 Msa1111700:CDS
TACCAAGGCCATTAGCAAGA+AGG 0.481777 7_3:-57429562 None:intergenic
GACATGCTTGAGGTTGGAAA+TGG 0.481921 7_3:+57426965 Msa1111700:CDS
GCTGATGCCCTTGTTTCCAC+TGG 0.482706 7_3:+57425549 Msa1111700:intron
GCTGTTGTGTTCCTTAATAG+AGG 0.483389 7_3:+57427756 Msa1111700:CDS
TCACATAGCGAAAAGAAGAT+TGG 0.486370 7_3:-57426476 None:intergenic
TTAAGTGTAGTGGTTGCTAA+AGG 0.486832 7_3:+57424634 Msa1111700:five_prime_UTR
ATGCCAAAACCTTTGCATCA+TGG 0.491032 7_3:+57430556 Msa1111700:CDS
TATGATAACTGTAACAATGA+TGG 0.491063 7_3:+57426234 Msa1111700:CDS
ATGCTTGAGGTTGGAAATGG+AGG 0.493055 7_3:+57431520 Msa1111700:CDS
GATATGCTTGAGGTTGGAAA+TGG 0.493237 7_3:+57431517 Msa1111700:CDS
TCCACTGGTCTATCTAAGCT+TGG 0.496660 7_3:+57425564 Msa1111700:CDS
CTTACACGCATGTGATTCTA+CGG 0.504462 7_3:-57432720 None:intergenic
TATCATACAGGTGGAACAGT+TGG 0.505083 7_3:+57425281 Msa1111700:intron
TGCAGATTATGTTCATAGCA+AGG 0.510065 7_3:+57425918 Msa1111700:CDS
TGCAGATTATGTTCATAGCA+AGG 0.510065 7_3:+57430366 Msa1111700:CDS
TAGATAGACCAGTGGAAACA+AGG 0.513187 7_3:-57425557 None:intergenic
TATTATACAGGTGGAACAGT+TGG 0.513743 7_3:+57429801 Msa1111700:intron
TCAACTGGTCTATCTAAGCT+TGG 0.514706 7_3:+57430006 Msa1111700:CDS
CAGTTTGTGGGCCATCTCAA+AGG 0.516032 7_3:+57431573 Msa1111700:CDS
TAAGTGTAGTGGTTGCTAAA+GGG 0.518684 7_3:+57424635 Msa1111700:five_prime_UTR
TACACAATGAGGAGTAGGAT+TGG 0.519358 7_3:+57429434 Msa1111700:CDS
GCAAGACCTGGTGGCTGGAA+TGG 0.519508 7_3:+57426830 Msa1111700:CDS
TGATGACATAAATGATTCAT+GGG 0.521279 7_3:+57426641 Msa1111700:CDS
CTTGGTAAAACTCCTCCTAT+GGG 0.521865 7_3:+57424799 Msa1111700:CDS
AAATGTGACCAAAGAGACCT+TGG 0.529724 7_3:+57431912 Msa1111700:CDS
AGGTCCTCTTTCAGGAGATA+GGG 0.534637 7_3:+57427731 Msa1111700:CDS
TGCAGTGAGAGTGAGAGATA+TGG 0.536602 7_3:-57424602 None:intergenic
GATCCTGATATGCTTGAGGT+TGG 0.538064 7_3:+57431511 Msa1111700:intron
TCATTAGGGAACAACTATGA+TGG 0.538551 7_3:+57424742 Msa1111700:CDS
TCATTAGGGAACAACTATGA+TGG 0.538551 7_3:+57429521 Msa1111700:CDS
TGAAGTAAAGTGAAGTGAAG+TGG 0.539996 7_3:+57429409 Msa1111700:intron
GATTGGATTTGAGATGGTGG+TGG 0.540657 7_3:+57429451 Msa1111700:CDS
GCTAAGAAAGTTAGGATGGA+AGG 0.541248 7_3:+57427414 Msa1111700:CDS
TTTGTTGGATAGATATGGGC+AGG 0.543001 7_3:+57432352 Msa1111700:intron
ACTTTAGCACCCCATAAAGC+TGG 0.545198 7_3:-57426597 None:intergenic
ATCTTGCAAGACCTGGTGGA+TGG 0.545782 7_3:+57431374 Msa1111700:CDS
ACATCACAGCCTAGAAGAAG+AGG 0.546744 7_3:-57431886 None:intergenic
GCAGATTATGTTCATAGCAA+GGG 0.548297 7_3:+57425919 Msa1111700:CDS
GCAGATTATGTTCATAGCAA+GGG 0.548297 7_3:+57430367 Msa1111700:CDS
TAGATAGACCAGTTGAAACA+AGG 0.549426 7_3:-57429999 None:intergenic
TTGAAGTACCCATGATGCAA+AGG 0.550204 7_3:-57430565 None:intergenic
GATCCTGACATGCTTGAGGT+TGG 0.550317 7_3:+57426959 Msa1111700:intron
ACATCACAACCTAGAAGAAG+AGG 0.551396 7_3:-57427225 None:intergenic
AGCTGATGCACAAAATGACT+TGG 0.555556 7_3:-57432940 None:intergenic
ATGCTTGAGGTTGGAAATGG+AGG 0.556365 7_3:+57426968 Msa1111700:CDS
TTGGAATTTATTCAGATGCA+GGG 0.559186 7_3:+57430398 Msa1111700:CDS
GCTACCCTATATCCTGAAAG+AGG 0.563682 7_3:-57432376 None:intergenic
AACCAACCAAACATGCAAAA+GGG 0.563850 7_3:-57429483 None:intergenic
CTTATTAGAGACTATCTCCA+TGG 0.563876 7_3:-57427268 None:intergenic
TATATTATAGGGTAATCTGG+TGG 0.564585 7_3:+57430306 Msa1111700:intron
AAACCAACCAAATATGGAAG+AGG 0.564845 7_3:-57424705 None:intergenic
TGGAGTACACAATGAGGAGT+AGG 0.565957 7_3:+57429429 Msa1111700:CDS
GCTACCCTATCTCCTGAAAG+AGG 0.565978 7_3:-57427735 None:intergenic
GGATACACCTATGTTAACAT+AGG 0.566817 7_3:+57425585 Msa1111700:CDS
ACTTTACCATTCCAGCCACC+AGG 0.567323 7_3:-57426836 None:intergenic
TTGGAATTTATTCAGATGCA+GGG 0.568210 7_3:+57425950 Msa1111700:CDS
ACAAGCTAAGAAAGTTAGGA+TGG 0.568444 7_3:+57427410 Msa1111700:CDS
AACTCATGACCTAGTGAACC+AGG 0.568821 7_3:-57430528 None:intergenic
ATATTATAGGGTAATCTGGT+GGG 0.571411 7_3:+57430307 Msa1111700:intron
TTATATCAATATGCTTCTGA+AGG 0.572424 7_3:-57427779 None:intergenic
TAGGATTGGATTTGAGATGG+TGG 0.572502 7_3:+57429448 Msa1111700:CDS
ACATAAATGATTCATGGGAA+AGG 0.572873 7_3:+57426646 Msa1111700:CDS
GGTTGCTAAAGGGTACAGAA+TGG 0.578751 7_3:+57424645 Msa1111700:exon
ACTCGTGCTTTAGCGAAAGC+AGG 0.578895 7_3:+57426449 Msa1111700:CDS
TTCTAACCATTCCATCCACC+AGG 0.579926 7_3:-57431385 None:intergenic
GGATACACTTATGTCAACAT+AGG 0.580307 7_3:+57430027 Msa1111700:CDS
GCAAGACCTGGTGGATGGAA+TGG 0.580490 7_3:+57431379 Msa1111700:CDS
CTTATTAGAAACTATCTCCA+AGG 0.581265 7_3:-57431929 None:intergenic
AACTCATGACCTAGAGAACC+AGG 0.581401 7_3:-57426075 None:intergenic
TATGCTGATCTTGCAAGACC+TGG 0.581594 7_3:+57431367 Msa1111700:CDS
GCTTTATGGGGTGCTAAAGT+GGG 0.582782 7_3:+57426600 Msa1111700:CDS
TTTATGCAGTATGATTTCAA+GGG 0.593167 7_3:+57426778 Msa1111700:intron
GCTGATCTTGCAAGACCTGG+TGG 0.593354 7_3:+57431370 Msa1111700:CDS
TATCACACGATAGATTCACT+TGG 0.601659 7_3:+57432044 Msa1111700:intron
AAATGTGACTAAAGAGACCA+TGG 0.606791 7_3:+57427251 Msa1111700:CDS
TACAATGAATTACCTCCCAA+AGG 0.608422 7_3:-57427857 None:intergenic
TACAATGAATTACCTCCCAA+AGG 0.608422 7_3:-57432504 None:intergenic
AACAGATCCTGATATGCTTG+AGG 0.609688 7_3:+57431507 Msa1111700:intron
AACAGATCCTGACATGCTTG+AGG 0.610791 7_3:+57426955 Msa1111700:intron
GCAAGAGCTTTGATGCCAGA+AGG 0.611987 7_3:-57425898 None:intergenic
GCAAGAGCTTTGATGCCAGA+AGG 0.611987 7_3:-57430346 None:intergenic
ACAGCTAATTGGGATGACAT+TGG 0.612622 7_3:+57427801 Msa1111700:CDS
ACAGCTAATTGGGATGACAT+TGG 0.612622 7_3:+57432448 Msa1111700:CDS
GAAGTTATTGCAGTTAACCA+AGG 0.614628 7_3:+57427291 Msa1111700:CDS
GAAGTTATTGCAGTTAACCA+AGG 0.614628 7_3:+57431952 Msa1111700:CDS
TAGGATGGAAGGTGATGCTG+AGG 0.614856 7_3:+57427425 Msa1111700:CDS
TAGGATGGAAGGTGATGCTG+AGG 0.614856 7_3:+57432085 Msa1111700:CDS
GAATAATCAAACCTTTGAGA+TGG 0.615401 7_3:-57431584 None:intergenic
TTTATGCAGTATGATTTCAA+GGG 0.627638 7_3:+57431327 Msa1111700:intron
GAGTAGGATTGGATTTGAGA+TGG 0.633817 7_3:+57429445 Msa1111700:CDS
ACATTCACATACCCCATAGG+AGG 0.633947 7_3:-57429590 None:intergenic
TGCTTGAGGTTGGAAATGGA+GGG 0.639239 7_3:+57431521 Msa1111700:CDS
AACCAACCAAATATGGAAGA+GGG 0.641264 7_3:-57424704 None:intergenic
AGATAGACCAGTGGAAACAA+GGG 0.641799 7_3:-57425556 None:intergenic
ATGACATTCACATACCCCAT+AGG 0.643655 7_3:-57429593 None:intergenic
TTTACCACGACAGATTCGCT+TGG 0.645443 7_3:+57427384 Msa1111700:intron
AGATAGACCAGTTGAAACAA+GGG 0.645698 7_3:-57429998 None:intergenic
TTGGTAGAACTCCTCCTATG+GGG 0.646178 7_3:+57429579 Msa1111700:CDS
TATGCTGAGCATGCAAGACC+TGG 0.649983 7_3:+57426818 Msa1111700:CDS
AACTGGAGTATTAAGTGTAG+TGG 0.650007 7_3:+57424624 Msa1111700:five_prime_UTR
GCTGAGCATGCAAGACCTGG+TGG 0.651335 7_3:+57426821 Msa1111700:CDS
AATTTAGTGATATACCCCAT+AGG 0.655568 7_3:-57424814 None:intergenic
TTAGTGATATACCCCATAGG+AGG 0.659380 7_3:-57424811 None:intergenic
GAAATGTATCCAGCTTTATG+GGG 0.666608 7_3:+57426588 Msa1111700:CDS
TGCTTGAGGTTGGAAATGGA+GGG 0.673018 7_3:+57426969 Msa1111700:CDS
TTGGTAAAACTCCTCCTATG+GGG 0.687837 7_3:+57424800 Msa1111700:CDS
TCCAAGCTTAGATAGACCAG+TGG 0.698159 7_3:-57425565 None:intergenic
CCATAGGAGGAGTTCTACCA+AGG 0.702560 7_3:-57429577 None:intergenic
GTGAAGTGGAGTACACAATG+AGG 0.717847 7_3:+57429423 Msa1111700:intron
ATGGATCAAATCCCACTGTG+AGG 0.720541 7_3:+57426253 Msa1111700:CDS
TCAAGCAAGAGACCTTTGGG+AGG 0.722019 7_3:+57432492 Msa1111700:CDS
ATGATTCAAAGCCCACTGTG+AGG 0.728024 7_3:+57430708 Msa1111700:CDS
CCAAGCAAGAGACCTTTGGG+AGG 0.733936 7_3:+57427845 Msa1111700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTCTATTATGAATTA+TGG + chr7_3:57424950-57424969 Msa1111700:intron 10.0%
!!! ATATTGTGTTTTATTTATAA+GGG + chr7_3:57428525-57428544 Msa1111700:intron 10.0%
!!! AACAAAATATTTTAATGTTA+GGG - chr7_3:57428660-57428679 None:intergenic 10.0%
!!! TAACAAAATATTTTAATGTT+AGG - chr7_3:57428661-57428680 None:intergenic 10.0%
!! AATCTATAAGAAATAAATAT+AGG + chr7_3:57429036-57429055 Msa1111700:intron 10.0%
!!! AACATTTTTTTTTATTATAC+AGG + chr7_3:57429789-57429808 Msa1111700:intron 10.0%
!! TATCATATAAACTATATTAT+AGG + chr7_3:57430294-57430313 Msa1111700:intron 10.0%
!! ATCATATAAACTATATTATA+GGG + chr7_3:57430295-57430314 Msa1111700:intron 10.0%
!! AAAATAAAATAAAATACAAG+GGG - chr7_3:57430443-57430462 None:intergenic 10.0%
!! GAAAAATAAAATAAAATACA+AGG - chr7_3:57430445-57430464 None:intergenic 10.0%
!!! TCATTTTTTCAAATTATTAT+CGG + chr7_3:57431019-57431038 Msa1111700:intron 10.0%
!! TAAATTAATTATAATGATCT+TGG + chr7_3:57431748-57431767 Msa1111700:intron 10.0%
!!! TCAATTTTTTTTACTTTGTA+AGG + chr7_3:57425653-57425672 Msa1111700:intron 15.0%
!! TAATTATAAGCAAAAACTTT+CGG - chr7_3:57425817-57425836 None:intergenic 15.0%
!!! ATAGATTTTGTCTAATAATT+TGG + chr7_3:57427649-57427668 Msa1111700:intron 15.0%
!!! CATATTGTGTTTTATTTATA+AGG + chr7_3:57428524-57428543 Msa1111700:intron 15.0%
!!! ATAAGGGATTATAATTATTT+TGG + chr7_3:57428541-57428560 Msa1111700:intron 15.0%
!!! TTAAAATTTTGATACATTGA+AGG - chr7_3:57428599-57428618 None:intergenic 15.0%
!!! AAGTCCATTATTTTTTTAAA+TGG + chr7_3:57428896-57428915 Msa1111700:intron 15.0%
!!! AGTCCATTATTTTTTTAAAT+GGG + chr7_3:57428897-57428916 Msa1111700:intron 15.0%
!! TATCCCATTTAAAAAAATAA+TGG - chr7_3:57428903-57428922 None:intergenic 15.0%
!!! TTATTTTTTTAAATGGGATA+AGG + chr7_3:57428903-57428922 Msa1111700:intron 15.0%
!!! AATAATAGGAGTATTAAAAT+TGG - chr7_3:57429173-57429192 None:intergenic 15.0%
!! TAAATGGAAAGTAAATAAAA+TGG - chr7_3:57429726-57429745 None:intergenic 15.0%
!!! ATTTTTTTTTATTATACAGG+TGG + chr7_3:57429792-57429811 Msa1111700:intron 15.0%
!! TTTCTAACTAATATTTATTC+TGG + chr7_3:57430470-57430489 Msa1111700:intron 15.0%
!! TTTAGTGAATTCAAAATAAA+AGG + chr7_3:57432226-57432245 Msa1111700:intron 15.0%
!! TCTAAAGATTTATGATACTA+AGG + chr7_3:57425239-57425258 Msa1111700:intron 20.0%
!!! AACATTTTTTTCTATCATAC+AGG + chr7_3:57425269-57425288 Msa1111700:intron 20.0%
!! AAATTGATGAAAAAATCATC+CGG + chr7_3:57425320-57425339 Msa1111700:CDS 20.0%
!!! TCCAAATATTGTTATGTTTT+AGG + chr7_3:57425846-57425865 Msa1111700:intron 20.0%
!!! CCAAATATTGTTATGTTTTA+GGG + chr7_3:57425847-57425866 Msa1111700:intron 20.0%
!! TGATAAGATAAAAGTCTATT+AGG - chr7_3:57426330-57426349 None:intergenic 20.0%
!! ACAAACAAATAAAGTTTCAT+TGG - chr7_3:57426561-57426580 None:intergenic 20.0%
!!! TGAAACTTTATTTGTTTGTT+AGG + chr7_3:57426562-57426581 Msa1111700:intron 20.0%
!!! GAAACTTTATTTGTTTGTTA+GGG + chr7_3:57426563-57426582 Msa1111700:intron 20.0%
!!! AAACTTTATTTGTTTGTTAG+GGG + chr7_3:57426564-57426583 Msa1111700:intron 20.0%
!!! AATTAAGTTGTTTATCCAAA+CGG - chr7_3:57427082-57427101 None:intergenic 20.0%
!!! TCAATTTTCACATAAATCAA+AGG - chr7_3:57427150-57427169 None:intergenic 20.0%
!! ATTTCCTAATCATTGTAATA+TGG + chr7_3:57427340-57427359 Msa1111700:intron 20.0%
!!! ATGTTTTTTTGGTTAGATAT+GGG + chr7_3:57427707-57427726 Msa1111700:intron 20.0%
!! ATATTGATATAACAGCTAAT+TGG + chr7_3:57427790-57427809 Msa1111700:CDS 20.0%
!! TATTGATATAACAGCTAATT+GGG + chr7_3:57427791-57427810 Msa1111700:CDS 20.0%
!! ATTGTTACTCCTTATATATT+CGG - chr7_3:57428570-57428589 None:intergenic 20.0%
!!! CATCCTAATAATTTTGATTT+GGG - chr7_3:57428988-57429007 None:intergenic 20.0%
!!! TCATCCTAATAATTTTGATT+TGG - chr7_3:57428989-57429008 None:intergenic 20.0%
!! AAATCAAAATTATTAGGATG+AGG + chr7_3:57428988-57429007 Msa1111700:intron 20.0%
!! GATCTATATAGCTTAATAAT+AGG - chr7_3:57429187-57429206 None:intergenic 20.0%
!! GTAAATAACAAACAATACAT+TGG + chr7_3:57429210-57429229 Msa1111700:intron 20.0%
!! TTTGGCTATAAATAAAGATA+AGG + chr7_3:57429365-57429384 Msa1111700:intron 20.0%
!! TTGGCTATAAATAAAGATAA+GGG + chr7_3:57429366-57429385 Msa1111700:intron 20.0%
!!! ATTTCTTCTCTTAATTTTGT+TGG + chr7_3:57429619-57429638 Msa1111700:intron 20.0%
!! AGATGCATGTAAAATATAAA+TGG - chr7_3:57429742-57429761 None:intergenic 20.0%
!!! TATACTAGCATTTGATTTTT+AGG + chr7_3:57429939-57429958 Msa1111700:intron 20.0%
!! AATCAAGTACTAAAACATAA+TGG - chr7_3:57430232-57430251 None:intergenic 20.0%
!!! TATTTATTCTGGTTTTTTGT+AGG + chr7_3:57430481-57430500 Msa1111700:intron 20.0%
!! TAATCAAGTAAAATAACCAT+TGG - chr7_3:57430648-57430667 None:intergenic 20.0%
!!! TGGTTATTTTACTTGATTAT+AGG + chr7_3:57430649-57430668 Msa1111700:intron 20.0%
!!! GGTTATTTTACTTGATTATA+GGG + chr7_3:57430650-57430669 Msa1111700:intron 20.0%
!!! ATACATGATTTTGAAAAACA+TGG + chr7_3:57430814-57430833 Msa1111700:intron 20.0%
!!! ATTAAAGGAGTACTTAAAAT+TGG - chr7_3:57431074-57431093 None:intergenic 20.0%
!! AACAAAGAAAGTTTGATTAA+AGG - chr7_3:57431089-57431108 None:intergenic 20.0%
!! TTAGCTGTTATATTAATCTT+CGG - chr7_3:57432436-57432455 None:intergenic 20.0%
!! AGATTAATATAACAGCTAAT+TGG + chr7_3:57432437-57432456 Msa1111700:CDS 20.0%
!! GATTAATATAACAGCTAATT+GGG + chr7_3:57432438-57432457 Msa1111700:CDS 20.0%
!!! AATTCCTTCTCTTAATTTGT+TGG + chr7_3:57424833-57424852 Msa1111700:intron 25.0%
! TAGCAATACTTTAATTAGCA+AGG + chr7_3:57424879-57424898 Msa1111700:intron 25.0%
! CGAACTAATCTCTTATATAT+AGG - chr7_3:57425108-57425127 None:intergenic 25.0%
! ATCAGCTATAATTAGTTGAT+AGG - chr7_3:57425179-57425198 None:intergenic 25.0%
! AGATGCATGTAAAATATCAA+TGG - chr7_3:57425222-57425241 None:intergenic 25.0%
!!! ATTTTTTTCTATCATACAGG+TGG + chr7_3:57425272-57425291 Msa1111700:intron 25.0%
! CCCTAAAACATAACAATATT+TGG - chr7_3:57425850-57425869 None:intergenic 25.0%
!! AATGAAAAAAGTGCACATAT+GGG - chr7_3:57425995-57426014 None:intergenic 25.0%
!! TAATGAAAAAAGTGCACATA+TGG - chr7_3:57425996-57426015 None:intergenic 25.0%
!!! TATTTATGCTGTTTTTTCGT+AGG + chr7_3:57426028-57426047 Msa1111700:intron 25.0%
! TAATCAAGCAAAATAACCAT+TGG - chr7_3:57426193-57426212 None:intergenic 25.0%
!!! TGGTTATTTTGCTTGATTAT+AGG + chr7_3:57426194-57426213 Msa1111700:intron 25.0%
!!! GGTTATTTTGCTTGATTATA+GGG + chr7_3:57426195-57426214 Msa1111700:intron 25.0%
! TATGATAACTGTAACAATGA+TGG + chr7_3:57426234-57426253 Msa1111700:CDS 25.0%
!! TCATACGTAATTTTGAACTT+TGG + chr7_3:57426347-57426366 Msa1111700:intron 25.0%
!!! TGATTTGAGTTGAAGATTAA+AGG - chr7_3:57426383-57426402 None:intergenic 25.0%
! ACCATGACATTCTTATATAT+AGG + chr7_3:57426414-57426433 Msa1111700:intron 25.0%
! ACCTATATATAAGAATGTCA+TGG - chr7_3:57426418-57426437 None:intergenic 25.0%
! TGATGACATAAATGATTCAT+GGG + chr7_3:57426641-57426660 Msa1111700:CDS 25.0%
!!! AGTTTTATTACTAGTAGCTA+AGG - chr7_3:57426751-57426770 None:intergenic 25.0%
!! TTTTATGCAGTATGATTTCA+AGG + chr7_3:57426777-57426796 Msa1111700:intron 25.0%
! TTTATGCAGTATGATTTCAA+GGG + chr7_3:57426778-57426797 Msa1111700:intron 25.0%
! GTTAAATGAATATCTTGACT+CGG - chr7_3:57426925-57426944 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+GGG - chr7_3:57427081-57427100 None:intergenic 25.0%
! TTGAAATCATGTATTGTATC+TGG + chr7_3:57427166-57427185 Msa1111700:intron 25.0%
! AGTACCATATTACAATGATT+AGG - chr7_3:57427347-57427366 None:intergenic 25.0%
! TAGTATTATTTGTAGGGAAT+TGG + chr7_3:57427484-57427503 Msa1111700:intron 25.0%
!! TTTTGCGAAGTCAAAAAATA+AGG + chr7_3:57427570-57427589 Msa1111700:intron 25.0%
!!! TTCTTATCTGCATGTTTTTT+TGG + chr7_3:57427696-57427715 Msa1111700:intron 25.0%
!!! CATGTTTTTTTGGTTAGATA+TGG + chr7_3:57427706-57427725 Msa1111700:intron 25.0%
! TTATATCAATATGCTTCTGA+AGG - chr7_3:57427782-57427801 None:intergenic 25.0%
! AACAAAATGCAGTAAAACAT+AGG - chr7_3:57427956-57427975 None:intergenic 25.0%
!! TATGTTTTACTGCATTTTGT+TGG + chr7_3:57427955-57427974 Msa1111700:intron 25.0%
!! TTGTAAGCATTGTTGTTAAT+TGG + chr7_3:57428158-57428177 Msa1111700:intron 25.0%
!! CATTGTTGTTAATTGGAAAT+AGG + chr7_3:57428165-57428184 Msa1111700:intron 25.0%
! TTGTTACTCCTTATATATTC+GGG - chr7_3:57428569-57428588 None:intergenic 25.0%
!!! TTTTTTTAAATGGGATAAGG+AGG + chr7_3:57428906-57428925 Msa1111700:intron 25.0%
!!! TTTTTTAAATGGGATAAGGA+GGG + chr7_3:57428907-57428926 Msa1111700:intron 25.0%
! ACTCCCAAATCAAAATTATT+AGG + chr7_3:57428982-57429001 Msa1111700:intron 25.0%
! AACAAACAATACATTGGATT+TGG + chr7_3:57429216-57429235 Msa1111700:intron 25.0%
!!! ACTAGTCTTGTCTATTTTTT+TGG + chr7_3:57429347-57429366 Msa1111700:intron 25.0%
! TAGTAGTACTTTAATTAGCA+AGG + chr7_3:57429660-57429679 Msa1111700:intron 25.0%
! TCTAAAGATTTATGATACTG+AGG + chr7_3:57429759-57429778 Msa1111700:intron 25.0%
! TAAGAAAAATACCAGTTTCT+CGG - chr7_3:57429862-57429881 None:intergenic 25.0%
! CAATGAAAATTTGTGGATAA+AGG - chr7_3:57430141-57430160 None:intergenic 25.0%
! AACTATATTATAGGGTAATC+TGG + chr7_3:57430303-57430322 Msa1111700:intron 25.0%
! TATAAGATGCAGTTCTATTA+GGG - chr7_3:57430787-57430806 None:intergenic 25.0%
! TTATAAGATGCAGTTCTATT+AGG - chr7_3:57430788-57430807 None:intergenic 25.0%
!! TCAAACTTTCTTTGTTTGTT+AGG + chr7_3:57431093-57431112 Msa1111700:intron 25.0%
!! CAAACTTTCTTTGTTTGTTA+GGG + chr7_3:57431094-57431113 Msa1111700:intron 25.0%
!! AAACTTTCTTTGTTTGTTAG+GGG + chr7_3:57431095-57431114 Msa1111700:intron 25.0%
!! ATTTTATTAGCTAGTAGCTA+AGG - chr7_3:57431299-57431318 None:intergenic 25.0%
!! TTTTATGCAGTATGATTTCA+AGG + chr7_3:57426777-57426796 Msa1111700:intron 25.0%
! TTTATGCAGTATGATTTCAA+GGG + chr7_3:57426778-57426797 Msa1111700:intron 25.0%
! TACATGCTTTCACATAAATA+CGG - chr7_3:57431624-57431643 None:intergenic 25.0%
! AATGATTGTGCCTAATAATT+TGG + chr7_3:57432290-57432309 Msa1111700:intron 25.0%
! AAACATAGTGCCAAATTATT+AGG - chr7_3:57427662-57427681 None:intergenic 25.0%
!!! ATGTTTTGTTGGATAGATAT+GGG + chr7_3:57432348-57432367 Msa1111700:intron 25.0%
!!! ACATTTTGTGAATAAGTTGA+GGG + chr7_3:57428042-57428061 Msa1111700:CDS 25.0%
! ATAAATGTCAACTTGTACAT+TGG + chr7_3:57432863-57432882 Msa1111700:three_prime_UTR 25.0%
AAGAAAAAATGTCTGTGAGA+TGG + chr7_3:57424669-57424688 Msa1111700:CDS 30.0%
AATTTAGTGATATACCCCAT+AGG - chr7_3:57424817-57424836 None:intergenic 30.0%
GAATCCAACAAATTAAGAGA+AGG - chr7_3:57424840-57424859 None:intergenic 30.0%
! TTTATAGACTTCTGAGAAAC+TGG + chr7_3:57425452-57425471 Msa1111700:intron 30.0%
! CTGATTGTAAATTTTCTGCA+TGG + chr7_3:57425519-57425538 Msa1111700:intron 30.0%
TGTTGTACCTATGTTAACAT+AGG - chr7_3:57425595-57425614 None:intergenic 30.0%
CAACAAAAAATCGTGGATAA+AGG - chr7_3:57425702-57425721 None:intergenic 30.0%
TGAACTTAATCGCGATAATA+AGG + chr7_3:57425741-57425760 Msa1111700:CDS 30.0%
!!! TATGTTTTAGGGTAATCTAG+TGG + chr7_3:57425858-57425877 Msa1111700:intron 30.0%
!!! ATGTTTTAGGGTAATCTAGT+GGG + chr7_3:57425859-57425878 Msa1111700:intron 30.0%
AAGAAATCAACATTTCCTTC+TGG + chr7_3:57425883-57425902 Msa1111700:CDS 30.0%
TTGGAATTTATTCAGATGCA+GGG + chr7_3:57425950-57425969 Msa1111700:CDS 30.0%
! ATGAAAAAAGTGCACATATG+GGG - chr7_3:57425994-57426013 None:intergenic 30.0%
TTGGTTACATAGCAATTGAT+TGG - chr7_3:57426174-57426193 None:intergenic 30.0%
ATCAATTGCTATGTAACCAA+TGG + chr7_3:57426174-57426193 Msa1111700:intron 30.0%
! GCATACTTTAAGCATTGTAT+CGG + chr7_3:57426511-57426530 Msa1111700:intron 30.0%
CAAATAAAGTTTCATTGGAG+AGG - chr7_3:57426556-57426575 None:intergenic 30.0%
! AGAAATGTATCCAGCTTTAT+GGG + chr7_3:57426587-57426606 Msa1111700:CDS 30.0%
CTGATGACATAAATGATTCA+TGG + chr7_3:57426640-57426659 Msa1111700:CDS 30.0%
ACATAAATGATTCATGGGAA+AGG + chr7_3:57426646-57426665 Msa1111700:CDS 30.0%
ATATTGTTCACTTCAGTTTG+TGG + chr7_3:57427008-57427027 Msa1111700:intron 30.0%
TATTGTTCACTTCAGTTTGT+GGG + chr7_3:57427009-57427028 Msa1111700:intron 30.0%
! TTAAGTTGTTTATCCAAACG+GGG - chr7_3:57427080-57427099 None:intergenic 30.0%
TCGTCTCTAGTATTATTTGT+AGG + chr7_3:57427477-57427496 Msa1111700:intron 30.0%
CGTCTCTAGTATTATTTGTA+GGG + chr7_3:57427478-57427497 Msa1111700:intron 30.0%
GGATACTGAGGTTATAAATA+AGG + chr7_3:57427976-57427995 Msa1111700:intron 30.0%
TAGAACACAGTTACATAGAT+TGG + chr7_3:57428130-57428149 Msa1111700:intron 30.0%
TGTTACTCCTTATATATTCG+GGG - chr7_3:57428568-57428587 None:intergenic 30.0%
!! TGGACTTGTTAGATTTGAAA+TGG - chr7_3:57428883-57428902 None:intergenic 30.0%
TCAAGAACAAATTGAATCTC+AGG + chr7_3:57428945-57428964 Msa1111700:intron 30.0%
TCTGCATCAATGAAAATTTG+TGG - chr7_3:57430148-57430167 None:intergenic 30.0%
TATATTATAGGGTAATCTGG+TGG + chr7_3:57430306-57430325 Msa1111700:intron 30.0%
ATATTATAGGGTAATCTGGT+GGG + chr7_3:57430307-57430326 Msa1111700:intron 30.0%
AAGAAATCAACATTTCCTTC+TGG + chr7_3:57425883-57425902 Msa1111700:CDS 30.0%
ATTGGAATTTATTCAGATGC+AGG + chr7_3:57430397-57430416 Msa1111700:CDS 30.0%
TTGGAATTTATTCAGATGCA+GGG + chr7_3:57425950-57425969 Msa1111700:CDS 30.0%
TTGGTTACATAGCAATTGAT+TGG - chr7_3:57426174-57426193 None:intergenic 30.0%
ATCAATTGCTATGTAACCAA+TGG + chr7_3:57426174-57426193 Msa1111700:intron 30.0%
!! AAAAACATGGCCTTATGTAT+AGG + chr7_3:57430827-57430846 Msa1111700:intron 30.0%
TAACAGGATACCTATACATA+AGG - chr7_3:57430840-57430859 None:intergenic 30.0%
TCACATAACGAAAAGAAGAT+TGG - chr7_3:57430892-57430911 None:intergenic 30.0%
! TCTTCTTTTCGTTATGTGAA+TGG + chr7_3:57430893-57430912 Msa1111700:intron 30.0%
TGGTGACATAACTGATAATT+GGG + chr7_3:57431172-57431191 Msa1111700:intron 30.0%
ACATAACTGATAATTGGGAA+AGG + chr7_3:57431177-57431196 Msa1111700:intron 30.0%
! GAATAATCAAACCTTTGAGA+TGG - chr7_3:57431587-57431606 None:intergenic 30.0%
TTCACATAAATACGGATGTA+TGG - chr7_3:57431616-57431635 None:intergenic 30.0%
! ATGTGAAAGCATGTATTGTA+CGG + chr7_3:57431629-57431648 Msa1111700:intron 30.0%
CTTATTAGAAACTATCTCCA+AGG - chr7_3:57431932-57431951 None:intergenic 30.0%
CTTGGAGATAGTTTCTAATA+AGG + chr7_3:57431930-57431949 Msa1111700:CDS 30.0%
! TTCTTATCTGCATGTTTTGT+TGG + chr7_3:57432337-57432356 Msa1111700:intron 30.0%
!! CATGTTTTGTTGGATAGATA+TGG + chr7_3:57432347-57432366 Msa1111700:intron 30.0%
!! TTGCTTAATAAAGGCATTTC+AGG + chr7_3:57432406-57432425 Msa1111700:CDS 30.0%
CAAGTTTCATTGTACTTTGT+TGG + chr7_3:57432603-57432622 Msa1111700:intron 30.0%
TACTGCTGAGGTTATAAATA+AGG + chr7_3:57432627-57432646 Msa1111700:intron 30.0%
! CACATTTTGTGAATAAGTTG+AGG + chr7_3:57428041-57428060 Msa1111700:CDS 30.0%
!! TTGGAAGCATTGTTGATAAT+TGG + chr7_3:57432810-57432829 Msa1111700:three_prime_UTR 30.0%
TCAATCAAAAAAGAAGCAGA+TGG - chr7_3:57432914-57432933 None:intergenic 30.0%
! AACTGGAGTATTAAGTGTAG+TGG + chr7_3:57424624-57424643 Msa1111700:five_prime_UTR 35.0%
TTAAGTGTAGTGGTTGCTAA+AGG + chr7_3:57424634-57424653 Msa1111700:five_prime_UTR 35.0%
TAAGTGTAGTGGTTGCTAAA+GGG + chr7_3:57424635-57424654 Msa1111700:five_prime_UTR 35.0%
AAAAAATGTCTGTGAGATGG+TGG + chr7_3:57424672-57424691 Msa1111700:CDS 35.0%
AACCAACCAAATATGGAAGA+GGG - chr7_3:57424707-57424726 None:intergenic 35.0%
AAACCAACCAAATATGGAAG+AGG - chr7_3:57424708-57424727 None:intergenic 35.0%
TGACACAAACCAACCAAATA+TGG - chr7_3:57424714-57424733 None:intergenic 35.0%
TCATTAGGGAACAACTATGA+TGG + chr7_3:57424742-57424761 Msa1111700:CDS 35.0%
AGAAGAAACCTTCTTGCTAA+TGG + chr7_3:57424775-57424794 Msa1111700:CDS 35.0%
GGATACACCTATGTTAACAT+AGG + chr7_3:57425585-57425604 Msa1111700:CDS 35.0%
TGCAGATTATGTTCATAGCA+AGG + chr7_3:57425918-57425937 Msa1111700:CDS 35.0%
GCAGATTATGTTCATAGCAA+GGG + chr7_3:57425919-57425938 Msa1111700:CDS 35.0%
CTTGGAATTTATTCAGATGC+AGG + chr7_3:57425949-57425968 Msa1111700:CDS 35.0%
ACATGTAGCAAAAAAATGCC+TGG + chr7_3:57426057-57426076 Msa1111700:CDS 35.0%
! AAAAAAATGCCTGGTTCTCT+AGG + chr7_3:57426066-57426085 Msa1111700:CDS 35.0%
! ATGCCAAAACTTTTGCATCA+TGG + chr7_3:57426103-57426122 Msa1111700:CDS 35.0%
! TGCCAAAACTTTTGCATCAT+GGG + chr7_3:57426104-57426123 Msa1111700:CDS 35.0%
! TACCCATGATGCAAAAGTTT+TGG - chr7_3:57426109-57426128 None:intergenic 35.0%
!! ATTTTTGACTACCTCACAGT+GGG - chr7_3:57426267-57426286 None:intergenic 35.0%
!! TATTTTTGACTACCTCACAG+TGG - chr7_3:57426268-57426287 None:intergenic 35.0%
TCACATAGCGAAAAGAAGAT+TGG - chr7_3:57426479-57426498 None:intergenic 35.0%
! TCTTCTTTTCGCTATGTGAA+TGG + chr7_3:57426480-57426499 Msa1111700:CDS 35.0%
GAGAAATGTATCCAGCTTTA+TGG + chr7_3:57426586-57426605 Msa1111700:CDS 35.0%
! GAAATGTATCCAGCTTTATG+GGG + chr7_3:57426588-57426607 Msa1111700:CDS 35.0%
AAACCATGCACTCAATTTGT+TGG + chr7_3:57426672-57426691 Msa1111700:intron 35.0%
TACTAGTAGCTAAGGATAGT+AGG - chr7_3:57426743-57426762 None:intergenic 35.0%
! GAATGACAGAACCTTTGAAA+TGG - chr7_3:57427035-57427054 None:intergenic 35.0%
AAATGTGACTAAAGAGACCA+TGG + chr7_3:57427251-57427270 Msa1111700:CDS 35.0%
CTTATTAGAGACTATCTCCA+TGG - chr7_3:57427271-57427290 None:intergenic 35.0%
CATGGAGATAGTCTCTAATA+AGG + chr7_3:57427269-57427288 Msa1111700:CDS 35.0%
GAAGTTATTGCAGTTAACCA+AGG + chr7_3:57427291-57427310 Msa1111700:CDS 35.0%
ACAAGCTAAGAAAGTTAGGA+TGG + chr7_3:57427410-57427429 Msa1111700:CDS 35.0%
!!! TTTTTTGGTTAGATATGGGC+AGG + chr7_3:57427711-57427730 Msa1111700:intron 35.0%
TACAATGAATTACCTCCCAA+AGG - chr7_3:57427860-57427879 None:intergenic 35.0%
! TCATTTAGAACTCATGCTAC+TGG - chr7_3:57428109-57428128 None:intergenic 35.0%
! GTTTTCACAAGTTTTGCACA+AGG + chr7_3:57428474-57428493 Msa1111700:intron 35.0%
! TTTTGGTCCCCGAATATATA+AGG + chr7_3:57428558-57428577 Msa1111700:intron 35.0%
TGACTACGTGTTACACATTT+AGG + chr7_3:57428797-57428816 Msa1111700:intron 35.0%
GACTACGTGTTACACATTTA+GGG + chr7_3:57428798-57428817 Msa1111700:intron 35.0%
ACAAATTGAATCTCAGGATG+AGG + chr7_3:57428951-57428970 Msa1111700:intron 35.0%
TTCAGTTGAAATGAGAGAGA+GGG - chr7_3:57429393-57429412 None:intergenic 35.0%
TGAAGTAAAGTGAAGTGAAG+TGG + chr7_3:57429409-57429428 Msa1111700:intron 35.0%
AACCAACCAAACATGCAAAA+GGG - chr7_3:57429486-57429505 None:intergenic 35.0%
AAACCAACCAAACATGCAAA+AGG - chr7_3:57429487-57429506 None:intergenic 35.0%
TCATTAGGGAACAACTATGA+TGG + chr7_3:57424742-57424761 Msa1111700:CDS 35.0%
AGAAGAAACCTTCTTGCTAA+TGG + chr7_3:57424775-57424794 Msa1111700:CDS 35.0%
TATTATACAGGTGGAACAGT+TGG + chr7_3:57429801-57429820 Msa1111700:intron 35.0%
AGATAGACCAGTTGAAACAA+GGG - chr7_3:57430001-57430020 None:intergenic 35.0%
TAGATAGACCAGTTGAAACA+AGG - chr7_3:57430002-57430021 None:intergenic 35.0%
GGATACACTTATGTCAACAT+AGG + chr7_3:57430027-57430046 Msa1111700:CDS 35.0%
TGTGCTTATGATACTTTGCT+AGG - chr7_3:57430109-57430128 None:intergenic 35.0%
TCATTGATGCAGATGATTGT+TGG + chr7_3:57430155-57430174 Msa1111700:intron 35.0%
CATTGATGCAGATGATTGTT+GGG + chr7_3:57430156-57430175 Msa1111700:intron 35.0%
TGCAGATTATGTTCATAGCA+AGG + chr7_3:57425918-57425937 Msa1111700:CDS 35.0%
GCAGATTATGTTCATAGCAA+GGG + chr7_3:57425919-57425938 Msa1111700:CDS 35.0%
!! ATTTTTGACTACCTCACAGT+GGG - chr7_3:57426267-57426286 None:intergenic 35.0%
!! TATTTTTGACTACCTCACAG+TGG - chr7_3:57426268-57426287 None:intergenic 35.0%
ATAGGTATCCTGTTATGACT+CGG + chr7_3:57426432-57426451 Msa1111700:intron 35.0%
! TATGACTCGGGCTTTAATAA+AGG + chr7_3:57430858-57430877 Msa1111700:intron 35.0%
ATCGGTGTATATGTCAGTAT+CGG + chr7_3:57431037-57431056 Msa1111700:intron 35.0%
AGATATGCATCCAGCTAAAT+GGG + chr7_3:57431118-57431137 Msa1111700:intron 35.0%
CTGGTGACATAACTGATAAT+TGG + chr7_3:57431171-57431190 Msa1111700:intron 35.0%
GTAAAAACCATGCACTCAAT+TGG + chr7_3:57426668-57426687 Msa1111700:intron 35.0%
ATATCGTTCACTTCAGTTTG+TGG + chr7_3:57431560-57431579 Msa1111700:CDS 35.0%
TATCGTTCACTTCAGTTTGT+GGG + chr7_3:57431561-57431580 Msa1111700:CDS 35.0%
ATTTGTACAGCAGTGAATTC+AGG - chr7_3:57431656-57431675 None:intergenic 35.0%
!! CTTGGTTGTTGATTTGCAAT+TGG + chr7_3:57431766-57431785 Msa1111700:intron 35.0%
TGTGACACAGTTATAGATCT+TGG - chr7_3:57431799-57431818 None:intergenic 35.0%
! GAAAAAAGCACAGCACAATA+CGG - chr7_3:57431834-57431853 None:intergenic 35.0%
GAAGTTATTGCAGTTAACCA+AGG + chr7_3:57427291-57427310 Msa1111700:CDS 35.0%
TATCACACGATAGATTCACT+TGG + chr7_3:57432044-57432063 Msa1111700:intron 35.0%
ACAAGCTAAAAAGGTTAGGA+TGG + chr7_3:57432070-57432089 Msa1111700:CDS 35.0%
ACGGAATCGTATGTTGTATT+CGG - chr7_3:57432122-57432141 None:intergenic 35.0%
!! GCTGTTGTGTTGCTTAATAA+AGG + chr7_3:57432397-57432416 Msa1111700:CDS 35.0%
! CTTGCTTGAACAACAGTTTT+TGG - chr7_3:57432481-57432500 None:intergenic 35.0%
TACAATGAATTACCTCCCAA+AGG - chr7_3:57427860-57427879 None:intergenic 35.0%
! GTTACTTAGATTGCAGCTTT+TGG + chr7_3:57432791-57432810 Msa1111700:three_prime_UTR 35.0%
! TGTGTCACTGCTTCATCATT+AGG + chr7_3:57424727-57424746 Msa1111700:CDS 40.0%
! GTGTCACTGCTTCATCATTA+GGG + chr7_3:57424728-57424747 Msa1111700:CDS 40.0%
CTTGGTAAAACTCCTCCTAT+GGG + chr7_3:57424799-57424818 Msa1111700:CDS 40.0%
TTGGTAAAACTCCTCCTATG+GGG + chr7_3:57424800-57424819 Msa1111700:CDS 40.0%
TTAGTGATATACCCCATAGG+AGG - chr7_3:57424814-57424833 None:intergenic 40.0%
TATCATACAGGTGGAACAGT+TGG + chr7_3:57425281-57425300 Msa1111700:intron 40.0%
GAAAAAATCATCCGGCAAAC+TGG + chr7_3:57425328-57425347 Msa1111700:CDS 40.0%
AGATAGACCAGTGGAAACAA+GGG - chr7_3:57425559-57425578 None:intergenic 40.0%
TAGATAGACCAGTGGAAACA+AGG - chr7_3:57425560-57425579 None:intergenic 40.0%
TCTGCAGCAACAAAAAATCG+TGG - chr7_3:57425709-57425728 None:intergenic 40.0%
TTGTTGCTGCAGATGATTGT+TGG + chr7_3:57425716-57425735 Msa1111700:intron 40.0%
TGTTGCTGCAGATGATTGTT+GGG + chr7_3:57425717-57425736 Msa1111700:intron 40.0%
CATAGCAAGGGTCTTAAACT+TGG + chr7_3:57425931-57425950 Msa1111700:CDS 40.0%
!! ATGCAAAAGTTTTGGCATCC+TGG - chr7_3:57426101-57426120 None:intergenic 40.0%
! TGTATCGGTCTTCCAATGTT+AGG + chr7_3:57426526-57426545 Msa1111700:intron 40.0%
GTGCTAAAGTGGGAAATAGT+TGG + chr7_3:57426610-57426629 Msa1111700:CDS 40.0%
GTACCAACAAATTGAGTGCA+TGG - chr7_3:57426678-57426697 None:intergenic 40.0%
GCGCAGAAACTAATTCAAAC+AGG + chr7_3:57427124-57427143 Msa1111700:intron 40.0%
CACCTGTGAAGATTTATTGC+AGG + chr7_3:57427200-57427219 Msa1111700:intron 40.0%
AGCCTGCAATAAATCTTCAC+AGG - chr7_3:57427205-57427224 None:intergenic 40.0%
ACATCACAACCTAGAAGAAG+AGG - chr7_3:57427228-57427247 None:intergenic 40.0%
TATTGCAGTTAACCAAGGTG+AGG + chr7_3:57427296-57427315 Msa1111700:intron 40.0%
ACTCAAATTATGCCTCACCT+TGG - chr7_3:57427311-57427330 None:intergenic 40.0%
GCGTACAAGCTAAGAAAGTT+AGG + chr7_3:57427406-57427425 Msa1111700:CDS 40.0%
GCTAAGAAAGTTAGGATGGA+AGG + chr7_3:57427414-57427433 Msa1111700:CDS 40.0%
GAATTGGATTCTCTGCTGTT+AGG + chr7_3:57427500-57427519 Msa1111700:intron 40.0%
GTAATGCATTCAAGGGATCT+CGG - chr7_3:57427616-57427635 None:intergenic 40.0%
GCACACTGTAATGCATTCAA+GGG - chr7_3:57427623-57427642 None:intergenic 40.0%
AGCACACTGTAATGCATTCA+AGG - chr7_3:57427624-57427643 None:intergenic 40.0%
GCTGTTGTGTTCCTTAATAG+AGG + chr7_3:57427756-57427775 Msa1111700:CDS 40.0%
ACAGCTAATTGGGATGACAT+TGG + chr7_3:57427801-57427820 Msa1111700:CDS 40.0%
! CTTGCTTGGACAACAGTTTT+TGG - chr7_3:57427834-57427853 None:intergenic 40.0%
! CTGCATTTTGTTGGATACTG+AGG + chr7_3:57427964-57427983 Msa1111700:intron 40.0%
GTGTACAAGCTCAAGTGATT+TGG + chr7_3:57428300-57428319 Msa1111700:intron 40.0%
!! ATCTAGACATTTGGTGCACA+TGG + chr7_3:57428349-57428368 Msa1111700:intron 40.0%
!! TCTAGACATTTGGTGCACAT+GGG + chr7_3:57428350-57428369 Msa1111700:intron 40.0%
ACTAGCAAAGTGCACAATCA+AGG - chr7_3:57428628-57428647 None:intergenic 40.0%
GTTCTTGATCATGATCTTCC+AGG - chr7_3:57428933-57428952 None:intergenic 40.0%
ACTGCAAATCTACACGTGAA+AGG + chr7_3:57429059-57429078 Msa1111700:intron 40.0%
TCTACACGTGAAAGGATTCA+TGG + chr7_3:57429067-57429086 Msa1111700:intron 40.0%
ACTGAATACGACATTCACTC+AGG + chr7_3:57429092-57429111 Msa1111700:intron 40.0%
CTTCAGTTGAAATGAGAGAG+AGG - chr7_3:57429394-57429413 None:intergenic 40.0%
TACACAATGAGGAGTAGGAT+TGG + chr7_3:57429434-57429453 Msa1111700:CDS 40.0%
GAGTAGGATTGGATTTGAGA+TGG + chr7_3:57429445-57429464 Msa1111700:CDS 40.0%
! TAGGATTGGATTTGAGATGG+TGG + chr7_3:57429448-57429467 Msa1111700:CDS 40.0%
!!! ATTTGAGATGGTGGTGGTTT+TGG + chr7_3:57429457-57429476 Msa1111700:CDS 40.0%
! TGTGTCACTGCTTCATCATT+AGG + chr7_3:57424727-57424746 Msa1111700:CDS 40.0%
! GTGTCACTGCTTCATCATTA+GGG + chr7_3:57424728-57424747 Msa1111700:CDS 40.0%
! TCAACTGGTCTATCTAAGCT+TGG + chr7_3:57430006-57430025 Msa1111700:CDS 40.0%
CATAGCAAGGGTCTTAAGAT+TGG + chr7_3:57430379-57430398 Msa1111700:CDS 40.0%
ACATGTAGCAAAAAGATGCC+TGG + chr7_3:57430510-57430529 Msa1111700:CDS 40.0%
AAAAAGATGCCTGGTTCACT+AGG + chr7_3:57430519-57430538 Msa1111700:CDS 40.0%
!! ATGCAAAGGTTTTGGCATCT+TGG - chr7_3:57430554-57430573 None:intergenic 40.0%
ATGCCAAAACCTTTGCATCA+TGG + chr7_3:57430556-57430575 Msa1111700:CDS 40.0%
TGCCAAAACCTTTGCATCAT+GGG + chr7_3:57430557-57430576 Msa1111700:CDS 40.0%
! TACCCATGATGCAAAGGTTT+TGG - chr7_3:57430562-57430581 None:intergenic 40.0%
! TTGAAGTACCCATGATGCAA+AGG - chr7_3:57430568-57430587 None:intergenic 40.0%
TAGGTATCCTGTTATGACTC+GGG + chr7_3:57426433-57426452 Msa1111700:intron 40.0%
ATTAAAGCCCGAGTCATAAC+AGG - chr7_3:57430856-57430875 None:intergenic 40.0%
GTAGCACATATTGACATGTG+TGG + chr7_3:57430957-57430976 Msa1111700:intron 40.0%
! GTATATGTCAGTATCGGATC+TGG + chr7_3:57431043-57431062 Msa1111700:intron 40.0%
GAGATATGCATCCAGCTAAA+TGG + chr7_3:57431117-57431136 Msa1111700:intron 40.0%
GATATGCATCCAGCTAAATG+GGG + chr7_3:57431119-57431138 Msa1111700:intron 40.0%
GTGCTAAAGTGGGAAATAGT+TGG + chr7_3:57426610-57426629 Msa1111700:CDS 40.0%
GGAAATAGTTGGAGAACTAC+TGG + chr7_3:57426621-57426640 Msa1111700:CDS 40.0%
AAACCATGCACTCAATTGGT+TGG + chr7_3:57431203-57431222 Msa1111700:intron 40.0%
AGCTAGTAGCTAAGGATAGT+AGG - chr7_3:57431291-57431310 None:intergenic 40.0%
AACAGATCCTGATATGCTTG+AGG + chr7_3:57431507-57431526 Msa1111700:intron 40.0%
TTTCCAACCTCAAGCATATC+AGG - chr7_3:57431517-57431536 None:intergenic 40.0%
GATATGCTTGAGGTTGGAAA+TGG + chr7_3:57431517-57431536 Msa1111700:CDS 40.0%
AAATGTGACCAAAGAGACCT+TGG + chr7_3:57431912-57431931 Msa1111700:CDS 40.0%
AACTATCTCCAAGGTCTCTT+TGG - chr7_3:57431923-57431942 None:intergenic 40.0%
AAAACGACAATGCATCACCT+TGG - chr7_3:57431972-57431991 None:intergenic 40.0%
ACTTGGCGTACAAGCTAAAA+AGG + chr7_3:57432061-57432080 Msa1111700:CDS 40.0%
GCGTACAAGCTAAAAAGGTT+AGG + chr7_3:57432066-57432085 Msa1111700:CDS 40.0%
GCTAAAAAGGTTAGGATGGA+AGG + chr7_3:57432074-57432093 Msa1111700:CDS 40.0%
TTTGTTGGATAGATATGGGC+AGG + chr7_3:57432352-57432371 Msa1111700:intron 40.0%
AGGTCCTCTTTCAGGATATA+GGG + chr7_3:57432372-57432391 Msa1111700:CDS 40.0%
ACAGCTAATTGGGATGACAT+TGG + chr7_3:57427801-57427820 Msa1111700:CDS 40.0%
!! GCTTGAACAACAGTTTTTGG+AGG - chr7_3:57432478-57432497 None:intergenic 40.0%
TTGTTCAAGCAAGAGACCTT+TGG + chr7_3:57432488-57432507 Msa1111700:CDS 40.0%
TGTTCAAGCAAGAGACCTTT+GGG + chr7_3:57432489-57432508 Msa1111700:CDS 40.0%
TACTTTGTTGGATACTGCTG+AGG + chr7_3:57432615-57432634 Msa1111700:intron 40.0%
CTTACACGCATGTGATTCTA+CGG - chr7_3:57432723-57432742 None:intergenic 40.0%
!! TCTTCTAGAACTCATGCAAC+TGG - chr7_3:57432761-57432780 None:intergenic 40.0%
AGCTGATGCACAAAATGACT+TGG - chr7_3:57432943-57432962 None:intergenic 40.0%
TGCAGTGAGAGTGAGAGATA+TGG - chr7_3:57424605-57424624 None:intergenic 45.0%
! GGTTGCTAAAGGGTACAGAA+TGG + chr7_3:57424645-57424664 Msa1111700:exon 45.0%
!! TGTCTGTGAGATGGTGGTTT+TGG + chr7_3:57424678-57424697 Msa1111700:CDS 45.0%
TGGTGACCCTCTTCCATATT+TGG + chr7_3:57424698-57424717 Msa1111700:CDS 45.0%
GACCCTCTTCCATATTTGGT+TGG + chr7_3:57424702-57424721 Msa1111700:CDS 45.0%
AACCTTCTTGCTAATGGCCT+TGG + chr7_3:57424781-57424800 Msa1111700:CDS 45.0%
TACCAAGGCCATTAGCAAGA+AGG - chr7_3:57424786-57424805 None:intergenic 45.0%
! CCATAGGAGGAGTTTTACCA+AGG - chr7_3:57424801-57424820 None:intergenic 45.0%
CCTTGGTAAAACTCCTCCTA+TGG + chr7_3:57424798-57424817 Msa1111700:CDS 45.0%
! TCCACTGGTCTATCTAAGCT+TGG + chr7_3:57425564-57425583 Msa1111700:CDS 45.0%
TCCAAGCTTAGATAGACCAG+TGG - chr7_3:57425568-57425587 None:intergenic 45.0%
AACTCATGACCTAGAGAACC+AGG - chr7_3:57426078-57426097 None:intergenic 45.0%
TTCTCTAGGTCATGAGTTCC+AGG + chr7_3:57426080-57426099 Msa1111700:CDS 45.0%
ATGGATCAAATCCCACTGTG+AGG + chr7_3:57426253-57426272 Msa1111700:CDS 45.0%
GCTAAAGCACGAGTCATAAC+AGG - chr7_3:57426443-57426462 None:intergenic 45.0%
!! TGGAGAGGAGTACCTAACAT+TGG - chr7_3:57426541-57426560 None:intergenic 45.0%
ACTTTAGCACCCCATAAAGC+TGG - chr7_3:57426600-57426619 None:intergenic 45.0%
! AGCTTTATGGGGTGCTAAAG+TGG + chr7_3:57426599-57426618 Msa1111700:CDS 45.0%
! GCTTTATGGGGTGCTAAAGT+GGG + chr7_3:57426600-57426619 Msa1111700:CDS 45.0%
AACAGATCCTGACATGCTTG+AGG + chr7_3:57426955-57426974 Msa1111700:intron 45.0%
TTTCCAACCTCAAGCATGTC+AGG - chr7_3:57426965-57426984 None:intergenic 45.0%
GACATGCTTGAGGTTGGAAA+TGG + chr7_3:57426965-57426984 Msa1111700:CDS 45.0%
ATGCTTGAGGTTGGAAATGG+AGG + chr7_3:57426968-57426987 Msa1111700:CDS 45.0%
TGCTTGAGGTTGGAAATGGA+GGG + chr7_3:57426969-57426988 Msa1111700:CDS 45.0%
CAGTTTGTGGGCCATTTCAA+AGG + chr7_3:57427021-57427040 Msa1111700:intron 45.0%
TTTACCACGACAGATTCGCT+TGG + chr7_3:57427384-57427403 Msa1111700:intron 45.0%
AGGTCCTCTTTCAGGAGATA+GGG + chr7_3:57427731-57427750 Msa1111700:CDS 45.0%
! GCTTCTGAAGGCCTCTATTA+AGG - chr7_3:57427770-57427789 None:intergenic 45.0%
!! GCTTGGACAACAGTTTTTGG+TGG - chr7_3:57427831-57427850 None:intergenic 45.0%
TTGTCCAAGCAAGAGACCTT+TGG + chr7_3:57427841-57427860 Msa1111700:CDS 45.0%
TGTCCAAGCAAGAGACCTTT+GGG + chr7_3:57427842-57427861 Msa1111700:CDS 45.0%
!! TGATTTGGTTGATGTGTGCC+TGG + chr7_3:57428315-57428334 Msa1111700:intron 45.0%
! GATTTGGTTGATGTGTGCCT+GGG + chr7_3:57428316-57428335 Msa1111700:intron 45.0%
!! CTAGACATTTGGTGCACATG+GGG + chr7_3:57428351-57428370 Msa1111700:intron 45.0%
GGTGCACATGGGGATAAAAT+CGG + chr7_3:57428361-57428380 Msa1111700:intron 45.0%
!! GCACAAGGTTGTTGACTTGT+TGG + chr7_3:57428489-57428508 Msa1111700:intron 45.0%
GTGAAGTGGAGTACACAATG+AGG + chr7_3:57429423-57429442 Msa1111700:intron 45.0%
TGGAGTACACAATGAGGAGT+AGG + chr7_3:57429429-57429448 Msa1111700:CDS 45.0%
! GATTGGATTTGAGATGGTGG+TGG + chr7_3:57429451-57429470 Msa1111700:CDS 45.0%
! TGGTGACCCTTTTGCATGTT+TGG + chr7_3:57429477-57429496 Msa1111700:CDS 45.0%
! GACCCTTTTGCATGTTTGGT+TGG + chr7_3:57429481-57429500 Msa1111700:CDS 45.0%
AACCTTCTTGCTAATGGCCT+TGG + chr7_3:57424781-57424800 Msa1111700:CDS 45.0%
TACCAAGGCCATTAGCAAGA+AGG - chr7_3:57424786-57424805 None:intergenic 45.0%
GAAACACTGATCCGAGAAAC+TGG + chr7_3:57429848-57429867 Msa1111700:CDS 45.0%
!! AAACAAGGGCATCAGCTGTA+AGG - chr7_3:57425545-57425564 None:intergenic 45.0%
AACTCATGACCTAGTGAACC+AGG - chr7_3:57430531-57430550 None:intergenic 45.0%
ATGATTCAAAGCCCACTGTG+AGG + chr7_3:57430708-57430727 Msa1111700:CDS 45.0%
! ACTCGGGCTTTAATAAAGGC+AGG + chr7_3:57430862-57430881 Msa1111700:intron 45.0%
ACTTTAGCACCCCATTTAGC+TGG - chr7_3:57431131-57431150 None:intergenic 45.0%
! AGCTAAATGGGGTGCTAAAG+TGG + chr7_3:57431130-57431149 Msa1111700:intron 45.0%
! GCTAAATGGGGTGCTAAAGT+GGG + chr7_3:57431131-57431150 Msa1111700:intron 45.0%
GTACCAACCAATTGAGTGCA+TGG - chr7_3:57431209-57431228 None:intergenic 45.0%
TATGCTGATCTTGCAAGACC+TGG + chr7_3:57431367-57431386 Msa1111700:CDS 45.0%
TTCTAACCATTCCATCCACC+AGG - chr7_3:57431388-57431407 None:intergenic 45.0%
GATCCTGATATGCTTGAGGT+TGG + chr7_3:57431511-57431530 Msa1111700:intron 45.0%
ATGCTTGAGGTTGGAAATGG+AGG + chr7_3:57426968-57426987 Msa1111700:CDS 45.0%
TGCTTGAGGTTGGAAATGGA+GGG + chr7_3:57426969-57426988 Msa1111700:CDS 45.0%
!!! TTGTGCTGTGCTTTTTTCGC+TGG + chr7_3:57431836-57431855 Msa1111700:intron 45.0%
!!! TGCTTTTTTCGCTGGTTCAC+CGG + chr7_3:57431844-57431863 Msa1111700:intron 45.0%
ACATCACAGCCTAGAAGAAG+AGG - chr7_3:57431889-57431908 None:intergenic 45.0%
AAATCCATACACGCTCGAGA+CGG - chr7_3:57432141-57432160 None:intergenic 45.0%
GGCGTACCATCTTAATCCAA+CGG + chr7_3:57432247-57432266 Msa1111700:intron 45.0%
TCTCAGCCGTTGGATTAAGA+TGG - chr7_3:57432256-57432275 None:intergenic 45.0%
CAGGTCCTCTTTCAGGATAT+AGG + chr7_3:57432371-57432390 Msa1111700:CDS 45.0%
GCTACCCTATATCCTGAAAG+AGG - chr7_3:57432379-57432398 None:intergenic 45.0%
!! AAAAATAAAATAAAATACAA+GGG - chr7_3:57430444-57430463 None:intergenic 5.0%
TCTCTCACTCTCACTGCAAC+TGG + chr7_3:57424607-57424626 Msa1111700:five_prime_UTR 50.0%
CCGAGCAAATACCAGTTTGC+CGG - chr7_3:57425342-57425361 None:intergenic 50.0%
CCGGCAAACTGGTATTTGCT+CGG + chr7_3:57425339-57425358 Msa1111700:intron 50.0%
! GCAAGAGCTTTGATGCCAGA+AGG - chr7_3:57425901-57425920 None:intergenic 50.0%
ACTCGTGCTTTAGCGAAAGC+AGG + chr7_3:57426449-57426468 Msa1111700:CDS 50.0%
TATGCTGAGCATGCAAGACC+TGG + chr7_3:57426818-57426837 Msa1111700:CDS 50.0%
ACTTTACCATTCCAGCCACC+AGG - chr7_3:57426839-57426858 None:intergenic 50.0%
GATCCTGACATGCTTGAGGT+TGG + chr7_3:57426959-57426978 Msa1111700:intron 50.0%
CATGTATCTTGAGCCCCGTT+TGG + chr7_3:57427064-57427083 Msa1111700:intron 50.0%
TTGCAGGCTCCTCTTCTTCT+AGG + chr7_3:57427216-57427235 Msa1111700:intron 50.0%
TAGGATGGAAGGTGATGCTG+AGG + chr7_3:57427425-57427444 Msa1111700:CDS 50.0%
ATATGGGCAGGTCCTCTTTC+AGG + chr7_3:57427723-57427742 Msa1111700:CDS 50.0%
CAGGTCCTCTTTCAGGAGAT+AGG + chr7_3:57427730-57427749 Msa1111700:CDS 50.0%
GCTACCCTATCTCCTGAAAG+AGG - chr7_3:57427738-57427757 None:intergenic 50.0%
TTGATGTGTGCCTGGGTCAA+GGG + chr7_3:57428323-57428342 Msa1111700:intron 50.0%
CAAGGGCGGATCTAGACATT+TGG + chr7_3:57428340-57428359 Msa1111700:intron 50.0%
TAAATGGGATAAGGAGGGCC+TGG + chr7_3:57428912-57428931 Msa1111700:intron 50.0%
! GCTGATGCCCTTGTTTCAAC+TGG + chr7_3:57429991-57430010 Msa1111700:intron 50.0%
! GCAAGAGCTTTGATGCCAGA+AGG - chr7_3:57425901-57425920 None:intergenic 50.0%
ATCTTGCAAGACCTGGTGGA+TGG + chr7_3:57431374-57431393 Msa1111700:CDS 50.0%
CAGTTTGTGGGCCATCTCAA+AGG + chr7_3:57431573-57431592 Msa1111700:CDS 50.0%
AGCCTGCAACAAACCTTCAC+CGG - chr7_3:57431866-57431885 None:intergenic 50.0%
TTGCAGGCTCCTCTTCTTCT+AGG + chr7_3:57427216-57427235 Msa1111700:intron 50.0%
TAGGATGGAAGGTGATGCTG+AGG + chr7_3:57427425-57427444 Msa1111700:CDS 50.0%
GTCTCGAGCGTGTATGGATT+TGG + chr7_3:57432140-57432159 Msa1111700:intron 50.0%
ATATGGGCAGGTCCTCTTTC+AGG + chr7_3:57427723-57427742 Msa1111700:CDS 50.0%
TCAAGCAAGAGACCTTTGGG+AGG + chr7_3:57432492-57432511 Msa1111700:CDS 50.0%
! GCTGATGCCCTTGTTTCCAC+TGG + chr7_3:57425549-57425568 Msa1111700:intron 55.0%
TACGCCAAGCGAATCTGTCG+TGG - chr7_3:57427391-57427410 None:intergenic 55.0%
CCTCCCAAAGGTCTCTTGCT+TGG - chr7_3:57427848-57427867 None:intergenic 55.0%
CCAAGCAAGAGACCTTTGGG+AGG + chr7_3:57427845-57427864 Msa1111700:CDS 55.0%
GTTGATGTGTGCCTGGGTCA+AGG + chr7_3:57428322-57428341 Msa1111700:intron 55.0%
GCTGATCTTGCAAGACCTGG+TGG + chr7_3:57431370-57431389 Msa1111700:CDS 55.0%
! GCAAGACCTGGTGGATGGAA+TGG + chr7_3:57431379-57431398 Msa1111700:CDS 55.0%
!! TTTCGCTGGTTCACCGGTGA+AGG + chr7_3:57431850-57431869 Msa1111700:intron 55.0%
!! CACCGGTGAAGGTTTGTTGC+AGG + chr7_3:57431861-57431880 Msa1111700:intron 55.0%
GATTCCGTCTCGAGCGTGTA+TGG + chr7_3:57432134-57432153 Msa1111700:intron 55.0%
AAGCACACTGTCTCAGCCGT+TGG - chr7_3:57432266-57432285 None:intergenic 55.0%
GCTGAGCATGCAAGACCTGG+TGG + chr7_3:57426821-57426840 Msa1111700:CDS 60.0%
AGCATGCAAGACCTGGTGGC+TGG + chr7_3:57426825-57426844 Msa1111700:CDS 60.0%
GCAAGACCTGGTGGCTGGAA+TGG + chr7_3:57426830-57426849 Msa1111700:CDS 60.0%
ATGTGTGCCTGGGTCAAGGG+CGG + chr7_3:57428326-57428345 Msa1111700:intron 60.0%
TCTAGATCCGCCCTTGACCC+AGG - chr7_3:57428336-57428355 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 57424594 57432965 57424594 ID=Msa1111700;Name=Msa1111700
chr7_3 mRNA 57424594 57432965 57424594 ID=Msa1111700-mRNA-1;Parent=Msa1111700;Name=Msa1111700-mRNA-1;_AED=0.24;_eAED=0.24;_QI=70|0.88|0.85|1|0.88|0.89|28|196|755
chr7_3 exon 57424594 57424821 57424594 ID=Msa1111700-mRNA-1:exon:12389;Parent=Msa1111700-mRNA-1
chr7_3 exon 57425291 57425349 57425291 ID=Msa1111700-mRNA-1:exon:12390;Parent=Msa1111700-mRNA-1
chr7_3 exon 57425550 57425606 57425550 ID=Msa1111700-mRNA-1:exon:12391;Parent=Msa1111700-mRNA-1
chr7_3 exon 57425728 57425762 57425728 ID=Msa1111700-mRNA-1:exon:12392;Parent=Msa1111700-mRNA-1
chr7_3 exon 57425868 57425971 57425868 ID=Msa1111700-mRNA-1:exon:12393;Parent=Msa1111700-mRNA-1
chr7_3 exon 57426050 57426125 57426050 ID=Msa1111700-mRNA-1:exon:12394;Parent=Msa1111700-mRNA-1
chr7_3 exon 57426216 57426274 57426216 ID=Msa1111700-mRNA-1:exon:12395;Parent=Msa1111700-mRNA-1
chr7_3 exon 57426436 57426501 57426436 ID=Msa1111700-mRNA-1:exon:12396;Parent=Msa1111700-mRNA-1
chr7_3 exon 57426584 57426667 57426584 ID=Msa1111700-mRNA-1:exon:12397;Parent=Msa1111700-mRNA-1
chr7_3 exon 57426787 57426851 57426787 ID=Msa1111700-mRNA-1:exon:12398;Parent=Msa1111700-mRNA-1
chr7_3 exon 57426960 57427012 57426960 ID=Msa1111700-mRNA-1:exon:12399;Parent=Msa1111700-mRNA-1
chr7_3 exon 57427222 57427312 57427222 ID=Msa1111700-mRNA-1:exon:12400;Parent=Msa1111700-mRNA-1
chr7_3 exon 57427397 57427446 57427397 ID=Msa1111700-mRNA-1:exon:12401;Parent=Msa1111700-mRNA-1
chr7_3 exon 57427723 57427866 57427723 ID=Msa1111700-mRNA-1:exon:12402;Parent=Msa1111700-mRNA-1
chr7_3 exon 57428025 57428092 57428025 ID=Msa1111700-mRNA-1:exon:12403;Parent=Msa1111700-mRNA-1
chr7_3 exon 57429424 57429600 57429424 ID=Msa1111700-mRNA-1:exon:12404;Parent=Msa1111700-mRNA-1
chr7_3 exon 57429811 57429869 57429811 ID=Msa1111700-mRNA-1:exon:12405;Parent=Msa1111700-mRNA-1
chr7_3 exon 57429992 57430048 57429992 ID=Msa1111700-mRNA-1:exon:12406;Parent=Msa1111700-mRNA-1
chr7_3 exon 57430167 57430201 57430167 ID=Msa1111700-mRNA-1:exon:12407;Parent=Msa1111700-mRNA-1
chr7_3 exon 57430316 57430419 57430316 ID=Msa1111700-mRNA-1:exon:12408;Parent=Msa1111700-mRNA-1
chr7_3 exon 57430503 57430578 57430503 ID=Msa1111700-mRNA-1:exon:12409;Parent=Msa1111700-mRNA-1
chr7_3 exon 57430671 57430729 57430671 ID=Msa1111700-mRNA-1:exon:12410;Parent=Msa1111700-mRNA-1
chr7_3 exon 57431336 57431400 57431336 ID=Msa1111700-mRNA-1:exon:12411;Parent=Msa1111700-mRNA-1
chr7_3 exon 57431512 57431594 57431512 ID=Msa1111700-mRNA-1:exon:12412;Parent=Msa1111700-mRNA-1
chr7_3 exon 57431883 57431973 57431883 ID=Msa1111700-mRNA-1:exon:12413;Parent=Msa1111700-mRNA-1
chr7_3 exon 57432057 57432106 57432057 ID=Msa1111700-mRNA-1:exon:12414;Parent=Msa1111700-mRNA-1
chr7_3 exon 57432364 57432513 57432364 ID=Msa1111700-mRNA-1:exon:12415;Parent=Msa1111700-mRNA-1
chr7_3 exon 57432677 57432965 57432677 ID=Msa1111700-mRNA-1:exon:12416;Parent=Msa1111700-mRNA-1
chr7_3 five_prime_UTR 57424594 57424663 57424594 ID=Msa1111700-mRNA-1:five_prime_utr;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57424664 57424821 57424664 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57425291 57425349 57425291 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57425550 57425606 57425550 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57425728 57425762 57425728 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57425868 57425971 57425868 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57426050 57426125 57426050 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57426216 57426274 57426216 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57426436 57426501 57426436 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57426584 57426667 57426584 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57426787 57426851 57426787 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57426960 57427012 57426960 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57427222 57427312 57427222 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57427397 57427446 57427397 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57427723 57427866 57427723 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57428025 57428092 57428025 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57429424 57429600 57429424 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57429811 57429869 57429811 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57429992 57430048 57429992 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57430167 57430201 57430167 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57430316 57430419 57430316 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57430503 57430578 57430503 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57430671 57430729 57430671 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57431336 57431400 57431336 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57431512 57431594 57431512 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57431883 57431973 57431883 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57432057 57432106 57432057 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57432364 57432513 57432364 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 CDS 57432677 57432769 57432677 ID=Msa1111700-mRNA-1:cds;Parent=Msa1111700-mRNA-1
chr7_3 three_prime_UTR 57432770 57432965 57432770 ID=Msa1111700-mRNA-1:three_prime_utr;Parent=Msa1111700-mRNA-1
Gene Sequence

>Msa1111700

ATGGAAAGAAAAAATGTCTGTGAGATGGTGGTTTTGGTGACCCTCTTCCATATTTGGTTGGTTTGTGTCACTGCTTCATCATTAGGGAACAACTATGATGGAGAGCATCTCAGAAGAAACCTTCTTGCTAATGGCCTTGGTAAAACTCCTCCTATGGGGTGGAACAGTTGGAATCATTTCAGTTGTCAAATTGATGAAAAAATCATCCGGCAAACTGCTGATGCCCTTGTTTCCACTGGTCTATCTAAGCTTGGATACACCTATGTTAACATAGATGATTGTTGGGCTGAACTTAATCGCGATAATAAGGGTAATCTAGTGGGAAAGAAATCAACATTTCCTTCTGGCATCAAAGCTCTTGCAGATTATGTTCATAGCAAGGGTCTTAAACTTGGAATTTATTCAGATGCAGGGTATTTTACATGTAGCAAAAAAATGCCTGGTTCTCTAGGTCATGAGTTCCAGGATGCCAAAACTTTTGCATCATGGGGCATTGATTATTTGAAGTATGATAACTGTAACAATGATGGATCAAATCCCACTGTGAGGTATCCTGTTATGACTCGTGCTTTAGCGAAAGCAGGTCGTCCAATCTTCTTTTCGCTATGTGAATGGGGAGAAATGTATCCAGCTTTATGGGGTGCTAAAGTGGGAAATAGTTGGAGAACTACTGATGACATAAATGATTCATGGGAAAGTATGATTTCAAGGGCTGACATGAATGAAGTTTATGCTGAGCATGCAAGACCTGGTGGCTGGAATGATCCTGACATGCTTGAGGTTGGAAATGGAGGGATGACAAAAAATGAATATATTGCTCCTCTTCTTCTAGGTTGTGATGTTAGAAATGTGACTAAAGAGACCATGGAGATAGTCTCTAATAAGGAAGTTATTGCAGTTAACCAAGATTCGCTTGGCGTACAAGCTAAGAAAGTTAGGATGGAAGGTGATGCTGAGATATGGGCAGGTCCTCTTTCAGGAGATAGGGTAGCTGTTGTGTTCCTTAATAGAGGCCTTCAGAAGCATATTGATATAACAGCTAATTGGGATGACATTGGCATTCCACCAAAAACTGTTGTCCAAGCAAGAGACCTTTGGGAGCACAAGACATTGAAGACACATTTTGTGAATAAGTTGAGTGCAACAGTAGAATCACATGCGTGTAAAATTGAAGTGGAGTACACAATGAGGAGTAGGATTGGATTTGAGATGGTGGTGGTTTTGGTGACCCTTTTGCATGTTTGGTTGGTTTGTGTCACTGCTTCATCATTAGGGAACAACTATGATGGAGAGCATCTCAGAAGAAACCTTCTTGCTAATGGCCTTGGTAGAACTCCTCCTATGGGGTGGAACAGTTGGAATCATTTCTACTGTCAAATTAATGAAACACTGATCCGAGAAACTGCTGATGCCCTTGTTTCAACTGGTCTATCTAAGCTTGGATACACTTATGTCAACATAGATGATTGTTGGGCTGAACAATATCGCGATAAAAATGGTAATCTGGTGGGAAAGAAATCAACATTTCCTTCTGGCATCAAAGCTCTTGCAGATTATGTTCATAGCAAGGGTCTTAAGATTGGAATTTATTCAGATGCAGGGTATTTTACATGTAGCAAAAAGATGCCTGGTTCACTAGGTCATGAGTTCCAAGATGCCAAAACCTTTGCATCATGGGGCATTGATTATTTGAAGTATGATAACTGTTACAATGATGATTCAAAGCCCACTGTGAGTATGATTTCAAGGGCAGACATGAATGAAGTTTATGCTGATCTTGCAAGACCTGGTGGATGGAATGATCCTGATATGCTTGAGGTTGGAAATGGAGGGATGACAAAAAATGAGTATATCGTTCACTTCAGTTTGTGGGCCATCTCAAAGGCTCCTCTTCTTCTAGGCTGTGATGTTAGAAATGTGACCAAAGAGACCTTGGAGATAGTTTCTAATAAGGAAGTTATTGCAGTTAACCAAGATTCACTTGGCGTACAAGCTAAAAAGGTTAGGATGGAAGGTGATGCTGAGATATGGGCAGGTCCTCTTTCAGGATATAGGGTAGCTGTTGTGTTGCTTAATAAAGGCATTTCAGGTGCTCCGAAGATTAATATAACAGCTAATTGGGATGACATTGGCATTCCTCCAAAAACTGTTGTTCAAGCAAGAGACCTTTGGGAGCACAAGACATTGAAGACACATTTTGTGAATAAGTTGAGGGTAACCGTAGAATCACATGCGTGTAAGATGTTCGTGTTGAAACCAGTTGCATGA

Protein sequence

>Msa1111700

MERKNVCEMVVLVTLFHIWLVCVTASSLGNNYDGEHLRRNLLANGLGKTPPMGWNSWNHFSCQIDEKIIRQTADALVSTGLSKLGYTYVNIDDCWAELNRDNKGNLVGKKSTFPSGIKALADYVHSKGLKLGIYSDAGYFTCSKKMPGSLGHEFQDAKTFASWGIDYLKYDNCNNDGSNPTVRYPVMTRALAKAGRPIFFSLCEWGEMYPALWGAKVGNSWRTTDDINDSWESMISRADMNEVYAEHARPGGWNDPDMLEVGNGGMTKNEYIAPLLLGCDVRNVTKETMEIVSNKEVIAVNQDSLGVQAKKVRMEGDAEIWAGPLSGDRVAVVFLNRGLQKHIDITANWDDIGIPPKTVVQARDLWEHKTLKTHFVNKLSATVESHACKIEVEYTMRSRIGFEMVVVLVTLLHVWLVCVTASSLGNNYDGEHLRRNLLANGLGRTPPMGWNSWNHFYCQINETLIRETADALVSTGLSKLGYTYVNIDDCWAEQYRDKNGNLVGKKSTFPSGIKALADYVHSKGLKIGIYSDAGYFTCSKKMPGSLGHEFQDAKTFASWGIDYLKYDNCYNDDSKPTVSMISRADMNEVYADLARPGGWNDPDMLEVGNGGMTKNEYIVHFSLWAISKAPLLLGCDVRNVTKETLEIVSNKEVIAVNQDSLGVQAKKVRMEGDAEIWAGPLSGYRVAVVLLNKGISGAPKINITANWDDIGIPPKTVVQARDLWEHKTLKTHFVNKLRVTVESHACKMFVLKPVA*