Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031910 | XP_003624658.1 | 98.868 | 265 | 3 | 0 | 1 | 265 | 1 | 265 | 0.0 | 534 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031910 | sp|Q9LFD5|BPA1_ARATH | 45.749 | 247 | 112 | 3 | 2 | 248 | 4 | 228 | 6.75e-65 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031910 | Q2HVL4 | 98.868 | 265 | 3 | 0 | 1 | 265 | 1 | 265 | 0.0 | 534 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1031910 | 0.837829 | 4.126960e-57 | -8.615850e-47 |
| Msa0014570 | Msa1031910 | 0.808415 | 3.131973e-50 | -8.615850e-47 |
| Msa0022550 | Msa1031910 | 0.808961 | 2.394619e-50 | -8.615850e-47 |
| Msa0039570 | Msa1031910 | 0.813914 | 2.010653e-51 | -8.615850e-47 |
| Msa0045790 | Msa1031910 | 0.811840 | 5.725536e-51 | -8.615850e-47 |
| Msa0046160 | Msa1031910 | 0.809235 | 2.091614e-50 | -8.615850e-47 |
| Msa0050380 | Msa1031910 | 0.801766 | 7.713232e-49 | -8.615850e-47 |
| Msa0050930 | Msa1031910 | 0.811428 | 7.036689e-51 | -8.615850e-47 |
| Msa0077450 | Msa1031910 | 0.815190 | 1.049695e-51 | -8.615850e-47 |
| Msa0662570 | Msa1031910 | 0.821278 | 4.396804e-53 | -8.615850e-47 |
| Msa0667050 | Msa1031910 | 0.805552 | 1.263110e-49 | -8.615850e-47 |
| Msa0679290 | Msa1031910 | -0.800934 | 1.141667e-48 | -8.615850e-47 |
| Msa0703780 | Msa1031910 | 0.806957 | 6.391038e-50 | -8.615850e-47 |
| Msa0724210 | Msa1031910 | 0.800711 | 1.267843e-48 | -8.615850e-47 |
| Msa0731940 | Msa1031910 | 0.818344 | 2.058434e-52 | -8.615850e-47 |
| Msa0748730 | Msa1031910 | 0.808794 | 2.599285e-50 | -8.615850e-47 |
| Msa0753720 | Msa1031910 | 0.800672 | 1.291371e-48 | -8.615850e-47 |
| Msa0760130 | Msa1031910 | 0.803479 | 3.418581e-49 | -8.615850e-47 |
| Msa0794510 | Msa1031910 | -0.826573 | 2.519321e-54 | -8.615850e-47 |
| Msa0804730 | Msa1031910 | 0.803385 | 3.575385e-49 | -8.615850e-47 |
| Msa0810220 | Msa1031910 | 0.837982 | 3.768373e-57 | -8.615850e-47 |
| Msa0820850 | Msa1031910 | 0.800802 | 1.214519e-48 | -8.615850e-47 |
| Msa0130970 | Msa1031910 | 0.809748 | 1.623419e-50 | -8.615850e-47 |
| Msa0170140 | Msa1031910 | 0.834845 | 2.368182e-56 | -8.615850e-47 |
| Msa0187830 | Msa1031910 | 0.808542 | 2.942191e-50 | -8.615850e-47 |
| Msa0191890 | Msa1031910 | 0.803929 | 2.756930e-49 | -8.615850e-47 |
| Msa0212990 | Msa1031910 | 0.801410 | 9.123282e-49 | -8.615850e-47 |
| Msa0376590 | Msa1031910 | 0.809228 | 2.099069e-50 | -8.615850e-47 |
| Msa0388960 | Msa1031910 | 0.805487 | 1.303701e-49 | -8.615850e-47 |
| Msa0393620 | Msa1031910 | 0.820006 | 8.614893e-53 | -8.615850e-47 |
| Msa0426900 | Msa1031910 | 0.827928 | 1.192972e-54 | -8.615850e-47 |
| Msa0436370 | Msa1031910 | 0.802143 | 6.451860e-49 | -8.615850e-47 |
| Msa0436760 | Msa1031910 | 0.811493 | 6.809925e-51 | -8.615850e-47 |
| Msa0437560 | Msa1031910 | 0.800661 | 1.298244e-48 | -8.615850e-47 |
| Msa0440750 | Msa1031910 | 0.815948 | 7.115752e-52 | -8.615850e-47 |
| Msa1028970 | Msa1031910 | 0.825905 | 3.631956e-54 | -8.615850e-47 |
| Msa1031910 | Msa1054990 | 0.827641 | 1.398598e-54 | -8.615850e-47 |
| Msa1031910 | Msa1098270 | 0.804157 | 2.471857e-49 | -8.615850e-47 |
| Msa1031910 | Msa1118610 | 0.934372 | 4.471082e-96 | -8.615850e-47 |
| Msa1031910 | Msa1121490 | 0.813728 | 2.210231e-51 | -8.615850e-47 |
| Msa1031910 | Msa1137570 | 0.818819 | 1.606658e-52 | -8.615850e-47 |
| Msa1031910 | Msa1139890 | 0.834412 | 3.043249e-56 | -8.615850e-47 |
| Msa1031910 | Msa1158810 | 0.973910 | 3.091936e-137 | -8.615850e-47 |
| Msa1031910 | Msa1162550 | -0.810501 | 1.117189e-50 | -8.615850e-47 |
| Msa1031910 | Msa1162780 | 0.803285 | 3.749141e-49 | -8.615850e-47 |
| Msa1031910 | Msa1215920 | 0.813752 | 2.183690e-51 | -8.615850e-47 |
| Msa1031910 | Msa1238930 | 0.800842 | 1.192024e-48 | -8.615850e-47 |
| Msa1031910 | Msa1249280 | 0.804037 | 2.617401e-49 | -8.615850e-47 |
| Msa1031910 | Msa1284680 | 0.814721 | 1.333933e-51 | -8.615850e-47 |
| Msa1031910 | Msa1297290 | 0.834175 | 3.489247e-56 | -8.615850e-47 |
| Msa1031910 | Msa1353470 | 0.809938 | 1.477135e-50 | -8.615850e-47 |
| Msa1031910 | Msa1366300 | 0.807059 | 6.081921e-50 | -8.615850e-47 |
| Msa1031910 | Msa1374470 | 0.816744 | 4.722475e-52 | -8.615850e-47 |
| Msa1031910 | Msa1379590 | 0.805981 | 1.026818e-49 | -8.615850e-47 |
| Msa1031910 | Msa1379850 | 0.804055 | 2.595621e-49 | -8.615850e-47 |
| Msa1031910 | Msa1385000 | 0.832588 | 8.677495e-56 | -8.615850e-47 |
| Msa1031910 | Msa1398890 | 0.826259 | 2.992097e-54 | -8.615850e-47 |
| Msa1031910 | Msa1401270 | 0.804392 | 2.207867e-49 | -8.615850e-47 |
| Msa1031910 | Msa1408620 | -0.838330 | 3.066489e-57 | -8.615850e-47 |
| Msa1031910 | Msa1421990 | 0.821933 | 3.102247e-53 | -8.615850e-47 |
| Msa1031910 | Msa1423880 | 0.805895 | 1.070289e-49 | -8.615850e-47 |
| Msa1031910 | Msa1424640 | 0.806076 | 9.802955e-50 | -8.615850e-47 |
| Msa1031910 | Msa1436480 | 0.810060 | 1.390621e-50 | -8.615850e-47 |
| Msa0254790 | Msa1031910 | 0.811420 | 7.065327e-51 | -8.615850e-47 |
| Msa0264780 | Msa1031910 | 0.801484 | 8.808995e-49 | -8.615850e-47 |
| Msa0280230 | Msa1031910 | 0.803404 | 3.543318e-49 | -8.615850e-47 |
| Msa0281640 | Msa1031910 | 0.804762 | 1.849236e-49 | -8.615850e-47 |
| Msa0305700 | Msa1031910 | 0.804487 | 2.109716e-49 | -8.615850e-47 |
| Msa0340450 | Msa1031910 | 0.808104 | 3.649533e-50 | -8.615850e-47 |
| Msa0345970 | Msa1031910 | 0.803062 | 4.169273e-49 | -8.615850e-47 |
| Msa0516370 | Msa1031910 | 0.801058 | 1.077148e-48 | -8.615850e-47 |
| Msa0572420 | Msa1031910 | 0.816767 | 4.667510e-52 | -8.615850e-47 |
| Msa0572480 | Msa1031910 | 0.830670 | 2.577137e-55 | -8.615850e-47 |
| Msa0844450 | Msa1031910 | 0.800687 | 1.282319e-48 | -8.615850e-47 |
| Msa0861930 | Msa1031910 | 0.805820 | 1.109876e-49 | -8.615850e-47 |
| Msa0870530 | Msa1031910 | 0.812288 | 4.572326e-51 | -8.615850e-47 |
| Msa0908770 | Msa1031910 | -0.802241 | 6.158201e-49 | -8.615850e-47 |
| Msa0924310 | Msa1031910 | 0.824514 | 7.747717e-54 | -8.615850e-47 |
| Msa0926890 | Msa1031910 | 0.800647 | 1.306702e-48 | -8.615850e-47 |
| Msa0927310 | Msa1031910 | 0.800952 | 1.132237e-48 | -8.615850e-47 |
| Msa0934890 | Msa1031910 | 0.815659 | 8.254563e-52 | -8.615850e-47 |
| Msa0935540 | Msa1031910 | 0.803693 | 3.087005e-49 | -8.615850e-47 |
| Msa0936210 | Msa1031910 | 0.806445 | 8.198026e-50 | -8.615850e-47 |
| Msa0936300 | Msa1031910 | 0.806361 | 8.541096e-50 | -8.615850e-47 |
| Msa0953120 | Msa1031910 | 0.801042 | 1.085250e-48 | -8.615850e-47 |
| Msa0969520 | Msa1031910 | 0.824703 | 6.993112e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031910 | MtrunA17_Chr7g0253621 | 98.868 | 265 | 3 | 0 | 1 | 265 | 1 | 265 | 0.0 | 534 |
| Msa1031910 | MtrunA17_Chr8g0366351 | 49.606 | 254 | 110 | 3 | 1 | 252 | 1 | 238 | 4.46e-75 | 229 |
| Msa1031910 | MtrunA17_Chr5g0410831 | 46.063 | 254 | 119 | 3 | 1 | 252 | 1 | 238 | 6.57e-65 | 204 |
| Msa1031910 | MtrunA17_Chr8g0392141 | 40.964 | 249 | 129 | 2 | 4 | 252 | 32 | 262 | 7.36e-63 | 199 |
| Msa1031910 | MtrunA17_Chr1g0161591 | 41.767 | 249 | 126 | 2 | 4 | 252 | 32 | 261 | 5.09e-62 | 197 |
| Msa1031910 | MtrunA17_Chr5g0416421 | 38.618 | 246 | 134 | 3 | 6 | 244 | 10 | 245 | 2.19e-49 | 163 |
| Msa1031910 | MtrunA17_Chr7g0217131 | 33.992 | 253 | 133 | 7 | 5 | 237 | 7 | 245 | 2.24e-35 | 127 |
| Msa1031910 | MtrunA17_Chr5g0410821 | 49.206 | 126 | 64 | 0 | 127 | 252 | 1 | 126 | 3.79e-34 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031910 | AT5G32450.1 | 72.285 | 267 | 72 | 2 | 1 | 265 | 1 | 267 | 1.48e-138 | 390 |
| Msa1031910 | AT4G17720.1 | 46.484 | 256 | 117 | 2 | 1 | 252 | 1 | 240 | 1.79e-68 | 214 |
| Msa1031910 | AT5G16840.2 | 45.749 | 247 | 113 | 3 | 2 | 248 | 4 | 229 | 3.24e-66 | 207 |
| Msa1031910 | AT5G16840.1 | 45.749 | 247 | 112 | 3 | 2 | 248 | 4 | 228 | 6.86e-66 | 206 |
| Msa1031910 | AT5G16840.3 | 45.565 | 248 | 113 | 3 | 1 | 248 | 1 | 226 | 7.59e-66 | 206 |
| Msa1031910 | AT5G46870.2 | 42.912 | 261 | 123 | 2 | 1 | 252 | 1 | 244 | 9.32e-65 | 204 |
| Msa1031910 | AT5G46870.1 | 42.912 | 261 | 123 | 2 | 1 | 252 | 1 | 244 | 9.32e-65 | 204 |
| Msa1031910 | AT1G67950.3 | 38.034 | 234 | 128 | 2 | 4 | 237 | 29 | 245 | 2.21e-53 | 174 |
| Msa1031910 | AT1G67950.1 | 38.462 | 234 | 126 | 2 | 4 | 237 | 29 | 244 | 4.72e-53 | 174 |
| Msa1031910 | AT1G67950.2 | 38.462 | 234 | 126 | 2 | 4 | 237 | 30 | 245 | 6.56e-53 | 173 |
| Msa1031910 | AT1G14340.1 | 38.912 | 239 | 139 | 3 | 6 | 244 | 9 | 240 | 2.04e-43 | 148 |
| Msa1031910 | AT1G67950.4 | 40.000 | 195 | 99 | 2 | 43 | 237 | 9 | 185 | 5.54e-42 | 143 |
| Msa1031910 | AT3G01210.2 | 34.583 | 240 | 131 | 5 | 7 | 233 | 9 | 235 | 1.40e-36 | 130 |
| Msa1031910 | AT3G01210.1 | 34.583 | 240 | 131 | 5 | 7 | 233 | 9 | 235 | 1.40e-36 | 130 |
Find 70 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATGTAATTGGTGATTT+TGG | 0.105280 | 7_1:-66676163 | Msa1031910:three_prime_UTR |
| CTTGAGACCTTCTGAAATTC+TGG | 0.168107 | 7_1:+66676346 | None:intergenic |
| AGCTGTTGCTTCTATGTAAT+TGG | 0.266408 | 7_1:-66676172 | Msa1031910:three_prime_UTR |
| CTTTGTCAATAGGAAATTAT+AGG | 0.275770 | 7_1:-66676120 | Msa1031910:three_prime_UTR |
| CATGAATTCTTCTCATTCTC+TGG | 0.285143 | 7_1:-66679248 | Msa1031910:CDS |
| AATGTCACAAATGCAGTCTT+TGG | 0.286462 | 7_1:+66678741 | None:intergenic |
| TGAAATTGCATTATTGTTAT+CGG | 0.307766 | 7_1:-66678700 | Msa1031910:intron |
| TTTGCTTGTTGCAGAGAATA+TGG | 0.318014 | 7_1:-66678768 | Msa1031910:intron |
| CCCTCTTTACCTTTGTCAAT+AGG | 0.336388 | 7_1:-66676130 | Msa1031910:three_prime_UTR |
| GGAAACTTCATTAGTTGTAT+AGG | 0.339512 | 7_1:-66676369 | Msa1031910:exon |
| AAGTAATTTATGTAGGAAAT+GGG | 0.350926 | 7_1:-66677718 | Msa1031910:intron |
| GTATTCGACGCGGCATCTTC+AGG | 0.358882 | 7_1:+66677667 | None:intergenic |
| AACTAGAGAGAAGTTTAATA+TGG | 0.366039 | 7_1:-66676586 | Msa1031910:CDS |
| GCAAGGGCTGGAAACGTTGC+TGG | 0.377253 | 7_1:-66676615 | Msa1031910:CDS |
| GCTGGAACAACATGGTTAAC+TGG | 0.389119 | 7_1:-66676654 | Msa1031910:CDS |
| GAGAGGAAGTTGAATGATAC+TGG | 0.403876 | 7_1:-66677206 | Msa1031910:CDS |
| TAATGCAATTTCAAGCGCTC+TGG | 0.410803 | 7_1:+66678710 | None:intergenic |
| TTCAACTTCTTTCATAATGC+AGG | 0.423306 | 7_1:-66679451 | Msa1031910:intron |
| TTGAACACATTCAGATCGTT+AGG | 0.424477 | 7_1:-66679220 | Msa1031910:intron |
| TTTAGCAAGGTGGCAAGGGC+TGG | 0.431556 | 7_1:-66676627 | Msa1031910:CDS |
| TCTTTCAGAACTGTTATGTA+AGG | 0.434768 | 7_1:-66676315 | Msa1031910:three_prime_UTR |
| GAAGAGTCGTTGAAGAGAAA+AGG | 0.438321 | 7_1:+66679485 | None:intergenic |
| ACAAGGCAAGGAAAAGGAAT+AGG | 0.455751 | 7_1:+66679592 | None:intergenic |
| TCCTATTGACAAAGGTAAAG+AGG | 0.478033 | 7_1:+66676129 | None:intergenic |
| CTTTGATGTCAAGTTTGAAA+CGG | 0.482047 | 7_1:+66676563 | None:intergenic |
| CCTATTGACAAAGGTAAAGA+GGG | 0.501511 | 7_1:+66676130 | None:intergenic |
| CGTTTCAAACTTGACATCAA+AGG | 0.502962 | 7_1:-66676562 | Msa1031910:intron |
| CTCTTTCAGGAGGAGAAACC+CGG | 0.504189 | 7_1:-66677503 | Msa1031910:intron |
| ACTAAGATATACTCTTCCAC+CGG | 0.504930 | 7_1:+66677484 | None:intergenic |
| GTTACAACTATGCTGGCAAA+AGG | 0.514375 | 7_1:-66677446 | Msa1031910:CDS |
| AGTAATTTATGTAGGAAATG+GGG | 0.515145 | 7_1:-66677717 | Msa1031910:intron |
| ACTGACCTTTGCAGATGCAT+TGG | 0.525594 | 7_1:+66677358 | None:intergenic |
| AACTATGCTGGCAAAAGGAT+CGG | 0.528169 | 7_1:-66677441 | Msa1031910:CDS |
| TGTGTGACAAGGCAAGGAAA+AGG | 0.528169 | 7_1:+66679586 | None:intergenic |
| TGCATTTAGCAAGGTGGCAA+GGG | 0.529790 | 7_1:-66676631 | Msa1031910:CDS |
| AATGCAATTTCAAGCGCTCT+GGG | 0.535893 | 7_1:+66678711 | None:intergenic |
| GTGCATTTAGCAAGGTGGCA+AGG | 0.536580 | 7_1:-66676632 | Msa1031910:CDS |
| TTTGCAACATAGTTCTCGAC+TGG | 0.536791 | 7_1:+66677823 | None:intergenic |
| GAATAGGAATGTAATGATGA+TGG | 0.540284 | 7_1:+66679608 | None:intergenic |
| AGAGAATGTGTGACAAGGCA+AGG | 0.551652 | 7_1:+66679580 | None:intergenic |
| GCATGCAGATATGTGACTGC+TGG | 0.562534 | 7_1:-66676672 | Msa1031910:intron |
| AGATGTGGTTACAACTATGC+TGG | 0.563766 | 7_1:-66677453 | Msa1031910:CDS |
| TTTCAGAAGGTCTCAAGTGA+AGG | 0.574589 | 7_1:-66676340 | Msa1031910:three_prime_UTR |
| CTTCACTTTCTCATTCACTA+CGG | 0.575467 | 7_1:+66677286 | None:intergenic |
| GTAATTTATGTAGGAAATGG+GGG | 0.577752 | 7_1:-66677716 | Msa1031910:intron |
| GTACAGTTACCTGCGTCTCA+CGG | 0.579988 | 7_1:+66677800 | None:intergenic |
| AGTATCATTCAACTTCCTCT+CGG | 0.584802 | 7_1:+66677208 | None:intergenic |
| TTGAATATTTCAGACAAGGA+CGG | 0.584833 | 7_1:-66679315 | Msa1031910:intron |
| GACTGCCAATGCATCTGCAA+AGG | 0.597300 | 7_1:-66677363 | Msa1031910:CDS |
| CTATAATTTCCTATTGACAA+AGG | 0.599157 | 7_1:+66676121 | None:intergenic |
| AAGTGAAGTCCGTGGATCAG+AGG | 0.602323 | 7_1:-66677271 | Msa1031910:CDS |
| AACATGTAGCCTCTGATCCA+CGG | 0.606146 | 7_1:+66677262 | None:intergenic |
| GTTAACTGGTGCATTTAGCA+AGG | 0.607564 | 7_1:-66676640 | Msa1031910:CDS |
| TTCAGATCTAGCTACTGAGA+GGG | 0.608323 | 7_1:-66679276 | Msa1031910:CDS |
| GATCAGCCGTCAAAACAAGC+AGG | 0.610495 | 7_1:-66677184 | Msa1031910:intron |
| CTGACAGAGAAATTGACAGT+TGG | 0.610991 | 7_1:-66677314 | Msa1031910:CDS |
| CTAAGATATACTCTTCCACC+GGG | 0.618426 | 7_1:+66677485 | None:intergenic |
| TCTTAGTAAAGCACAAGATG+TGG | 0.626024 | 7_1:-66677468 | Msa1031910:CDS |
| TGTTGCAAACCGTGAGACGC+AGG | 0.640196 | 7_1:-66677809 | Msa1031910:intron |
| GTATAGGCCAGAATTTCAGA+AGG | 0.643173 | 7_1:-66676353 | Msa1031910:exon |
| AGATGCCGCGTCGAATACTG+AGG | 0.644834 | 7_1:-66677662 | Msa1031910:intron |
| AACTGGTGCATTTAGCAAGG+TGG | 0.655445 | 7_1:-66676637 | Msa1031910:CDS |
| GAGAGAGAGAATGTGTGACA+AGG | 0.657756 | 7_1:+66679575 | None:intergenic |
| GAATGAGAAAGTGAAGTCCG+TGG | 0.658724 | 7_1:-66677279 | Msa1031910:CDS |
| TTTCAGATCTAGCTACTGAG+AGG | 0.669065 | 7_1:-66679277 | Msa1031910:CDS |
| CTATTGACAAAGGTAAAGAG+GGG | 0.670643 | 7_1:+66676131 | None:intergenic |
| CAGCAATATTTGCAGCCGAG+AGG | 0.674375 | 7_1:-66677223 | Msa1031910:CDS |
| ACATGTTTCAGATAAAACAA+TGG | 0.699760 | 7_1:-66677246 | Msa1031910:CDS |
| TTTCAGGAGGAGAAACCCGG+TGG | 0.713949 | 7_1:-66677500 | Msa1031910:intron |
| ATGTGACTGCTGGAACAACA+TGG | 0.736483 | 7_1:-66676662 | Msa1031910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTTGTTTATTTTATTT+TGG | + | chr7_1:66676573-66676592 | None:intergenic | 10.0% |
| !! | TAAAATAAACAAAAACATAA+TGG | - | chr7_1:66676576-66676595 | Msa1031910:CDS | 10.0% |
| !! | AAAATAAACAAAAACATAAT+GGG | - | chr7_1:66676577-66676596 | Msa1031910:CDS | 10.0% |
| !!! | TTGAAATTTAAAACAATATT+TGG | - | chr7_1:66676698-66676717 | Msa1031910:intron | 10.0% |
| !!! | TGAAATTTAAAACAATATTT+GGG | - | chr7_1:66676699-66676718 | Msa1031910:intron | 10.0% |
| !! | ACTAAGATTAAAAAACAAAA+GGG | + | chr7_1:66676434-66676453 | None:intergenic | 15.0% |
| !! | AACTAAGATTAAAAAACAAA+AGG | + | chr7_1:66676435-66676454 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTGAAATTTTTGT+TGG | - | chr7_1:66676613-66676632 | Msa1031910:CDS | 15.0% |
| !!! | TTTGTTTTGAAATTTTTGTT+GGG | - | chr7_1:66676614-66676633 | Msa1031910:CDS | 15.0% |
| !!! | AATTTTGAATAAAAACTTGT+AGG | - | chr7_1:66676993-66677012 | Msa1031910:intron | 15.0% |
| !!! | ATTTTGAATAAAAACTTGTA+GGG | - | chr7_1:66676994-66677013 | Msa1031910:intron | 15.0% |
| !! | TTATCAAAAGTAATTTATGT+AGG | - | chr7_1:66677856-66677875 | Msa1031910:CDS | 15.0% |
| !!! | AATATAAAATTTTGCATGAT+CGG | - | chr7_1:66677958-66677977 | Msa1031910:intron | 15.0% |
| !! | TATATTAAATTGTTATGGTT+TGG | - | chr7_1:66678482-66678501 | Msa1031910:intron | 15.0% |
| !! | ATTAAAATGAAAACTACAAA+TGG | - | chr7_1:66678723-66678742 | Msa1031910:CDS | 15.0% |
| !!! | GGAAACATATTATATTTTTT+TGG | - | chr7_1:66678744-66678763 | Msa1031910:CDS | 15.0% |
| !! | GAAAAAAGAATACAAAAAAT+TGG | + | chr7_1:66679374-66679393 | None:intergenic | 15.0% |
| !!! | ACTTTATTTTATTTCTTTGT+TGG | - | chr7_1:66679611-66679630 | Msa1031910:five_prime_UTR | 15.0% |
| !!! | GTTCTATTTTTACTCTAATT+TGG | - | chr7_1:66676213-66676232 | Msa1031910:three_prime_UTR | 20.0% |
| !!! | TAATTTGGTTTTTTCTTTCT+TGG | - | chr7_1:66676228-66676247 | Msa1031910:three_prime_UTR | 20.0% |
| !! | CTAAGATTAAAAAACAAAAG+GGG | + | chr7_1:66676433-66676452 | None:intergenic | 20.0% |
| !! | TTTAATCTTAGTTCCAATTA+AGG | - | chr7_1:66676442-66676461 | Msa1031910:intron | 20.0% |
| !! | TATAAACCACAAATAAATCA+TGG | - | chr7_1:66676499-66676518 | Msa1031910:intron | 20.0% |
| !! | ATAAACCACAAATAAATCAT+GGG | - | chr7_1:66676500-66676519 | Msa1031910:intron | 20.0% |
| !!! | TTGTTTTGAAATTTTTGTTG+GGG | - | chr7_1:66676615-66676634 | Msa1031910:CDS | 20.0% |
| !!! | GAAATTCTTACATATTGTTT+TGG | - | chr7_1:66676674-66676693 | Msa1031910:intron | 20.0% |
| !! | TGAAATTGCATTATTGTTAT+CGG | - | chr7_1:66676881-66676900 | Msa1031910:intron | 20.0% |
| !!! | TCTTTTCAAAAGTTTGTTTT+TGG | - | chr7_1:66676916-66676935 | Msa1031910:intron | 20.0% |
| !! | TATGAACATTTAGTTAAGAT+TGG | - | chr7_1:66677362-66677381 | Msa1031910:CDS | 20.0% |
| !! | AAGTACAAATAAATTCCTTT+GGG | - | chr7_1:66677501-66677520 | Msa1031910:intron | 20.0% |
| !! | AATTAAGAGCAATTGATATT+TGG | + | chr7_1:66677806-66677825 | None:intergenic | 20.0% |
| !! | AAAGTAATTTATGTAGGAAA+TGG | - | chr7_1:66677862-66677881 | Msa1031910:CDS | 20.0% |
| !! | AAGTAATTTATGTAGGAAAT+GGG | - | chr7_1:66677863-66677882 | Msa1031910:intron | 20.0% |
| !!! | TTTGGTAGTATTATTCAATT+GGG | - | chr7_1:66678500-66678519 | Msa1031910:intron | 20.0% |
| !! | TAATGATGACAAAGAAATTT+AGG | - | chr7_1:66678529-66678548 | Msa1031910:intron | 20.0% |
| !! | AATGATGACAAAGAAATTTA+GGG | - | chr7_1:66678530-66678549 | Msa1031910:intron | 20.0% |
| !!! | ATCTTTTAAAACAAGAAACT+TGG | + | chr7_1:66678619-66678638 | None:intergenic | 20.0% |
| !! | AAGATTTGTAAATGAATTTG+TGG | - | chr7_1:66678634-66678653 | Msa1031910:intron | 20.0% |
| !!! | ATATTTTTTTGGTACCATAT+AGG | - | chr7_1:66678755-66678774 | Msa1031910:CDS | 20.0% |
| !! | CAAAAATAATATACAACACA+GGG | + | chr7_1:66678865-66678884 | None:intergenic | 20.0% |
| !! | TCAAAAATAATATACAACAC+AGG | + | chr7_1:66678866-66678885 | None:intergenic | 20.0% |
| ! | TTTCTTGAATATTTCAGACA+AGG | - | chr7_1:66676262-66676281 | Msa1031910:three_prime_UTR | 25.0% |
| ! | CAAGAACAAAAAACCTTAAT+TGG | + | chr7_1:66676458-66676477 | None:intergenic | 25.0% |
| !!! | TTAAGGTTTTTTGTTCTTGA+AGG | - | chr7_1:66676459-66676478 | Msa1031910:intron | 25.0% |
| ! | TTTGTTCTTGAAGGTAAATT+TGG | - | chr7_1:66676468-66676487 | Msa1031910:intron | 25.0% |
| ! | TAAACCACAAATAAATCATG+GGG | - | chr7_1:66676501-66676520 | Msa1031910:intron | 25.0% |
| !!! | TGTTTTGAAATTTTTGTTGG+GGG | - | chr7_1:66676616-66676635 | Msa1031910:CDS | 25.0% |
| !!! | CTATTGTCAAGTTTGATTTT+TGG | - | chr7_1:66676955-66676974 | Msa1031910:intron | 25.0% |
| !! | TAGATTACCTTCTGTTTTAT+GGG | + | chr7_1:66677186-66677205 | None:intergenic | 25.0% |
| !! | TTAGATTACCTTCTGTTTTA+TGG | + | chr7_1:66677187-66677206 | None:intergenic | 25.0% |
| ! | AAAATGTCTACATTGACAAA+GGG | - | chr7_1:66677227-66677246 | Msa1031910:CDS | 25.0% |
| !!! | AAAGGGTACAAATTTTCATT+TGG | - | chr7_1:66677244-66677263 | Msa1031910:CDS | 25.0% |
| !! | TTCCATTTTCAATTTTGTGA+TGG | - | chr7_1:66677304-66677323 | Msa1031910:CDS | 25.0% |
| ! | ATCCATCACAAAATTGAAAA+TGG | + | chr7_1:66677309-66677328 | None:intergenic | 25.0% |
| !!! | TCAATTTTGTGATGGATAAT+TGG | - | chr7_1:66677312-66677331 | Msa1031910:CDS | 25.0% |
| ! | AATGTTCATAACAAGTCAAA+AGG | + | chr7_1:66677352-66677371 | None:intergenic | 25.0% |
| !! | CAGAAAGTAAAAACTTTTGA+AGG | - | chr7_1:66677409-66677428 | Msa1031910:CDS | 25.0% |
| ! | CAAGTACAAATAAATTCCTT+TGG | - | chr7_1:66677500-66677519 | Msa1031910:intron | 25.0% |
| ! | TATCCAAAAGAACATAGATT+GGG | + | chr7_1:66677639-66677658 | None:intergenic | 25.0% |
| ! | ATATCCAAAAGAACATAGAT+TGG | + | chr7_1:66677640-66677659 | None:intergenic | 25.0% |
| !!! | AGCTTTATTGTCTATATATC+AGG | - | chr7_1:66677700-66677719 | Msa1031910:CDS | 25.0% |
| !! | GCTTTATTGTCTATATATCA+GGG | - | chr7_1:66677701-66677720 | Msa1031910:CDS | 25.0% |
| ! | AGTAATTTATGTAGGAAATG+GGG | - | chr7_1:66677864-66677883 | Msa1031910:intron | 25.0% |
| ! | ACATGTTTCAGATAAAACAA+TGG | - | chr7_1:66678335-66678354 | Msa1031910:intron | 25.0% |
| !! | GTTTGGTAGTATTATTCAAT+TGG | - | chr7_1:66678499-66678518 | Msa1031910:intron | 25.0% |
| ! | ATGATGACAAAGAAATTTAG+GGG | - | chr7_1:66678531-66678550 | Msa1031910:intron | 25.0% |
| !! | ATGTTTTCTCCAAACTAAAT+AGG | + | chr7_1:66678557-66678576 | None:intergenic | 25.0% |
| ! | TTGCAATTGAAAATGAAAAC+AGG | + | chr7_1:66678582-66678601 | None:intergenic | 25.0% |
| ! | AAATATTGAAACATGACCAT+CGG | + | chr7_1:66678781-66678800 | None:intergenic | 25.0% |
| ! | AATGATATATCACATGTACA+TGG | - | chr7_1:66678816-66678835 | Msa1031910:intron | 25.0% |
| ! | AACTAGAGAGAAGTTTAATA+TGG | - | chr7_1:66678995-66679014 | Msa1031910:intron | 25.0% |
| !!! | CTATTATCTTTAGTTTGACA+CGG | + | chr7_1:66679062-66679081 | None:intergenic | 25.0% |
| !!! | TTCTATGTAATTGGTGATTT+TGG | - | chr7_1:66679418-66679437 | Msa1031910:intron | 25.0% |
| ! | CTATAATTTCCTATTGACAA+AGG | + | chr7_1:66679463-66679482 | None:intergenic | 25.0% |
| ! | CTTTGTCAATAGGAAATTAT+AGG | - | chr7_1:66679461-66679480 | Msa1031910:five_prime_UTR | 25.0% |
| !!! | CAATTGTTTTTCTTTTCTCA+TGG | - | chr7_1:66679491-66679510 | Msa1031910:five_prime_UTR | 25.0% |
| GAATAGGAATGTAATGATGA+TGG | + | chr7_1:66675976-66675995 | None:intergenic | 30.0% | |
| TTCAACTTCTTTCATAATGC+AGG | - | chr7_1:66676130-66676149 | Msa1031910:three_prime_UTR | 30.0% | |
| TGAATTGAAAGAAGTTGAAG+AGG | + | chr7_1:66676161-66676180 | None:intergenic | 30.0% | |
| TTGAATATTTCAGACAAGGA+CGG | - | chr7_1:66676266-66676285 | Msa1031910:three_prime_UTR | 30.0% | |
| GAGAAGTTAAATCCATATGA+TGG | - | chr7_1:66676776-66676795 | Msa1031910:intron | 30.0% | |
| !!! | TCAAGTTTGATTTTTGGAGT+CGG | - | chr7_1:66676961-66676980 | Msa1031910:intron | 30.0% |
| TTGACATGCAGAAAAACTAT+TGG | + | chr7_1:66677066-66677085 | None:intergenic | 30.0% | |
| ! | ATAGTTTTTCTGCATGTCAA+CGG | - | chr7_1:66677066-66677085 | Msa1031910:intron | 30.0% |
| ! | CAATGCTCTCTTATAAGTTT+TGG | + | chr7_1:66677125-66677144 | None:intergenic | 30.0% |
| ! | TTTTCATAATGACCAAAACC+TGG | + | chr7_1:66677211-66677230 | None:intergenic | 30.0% |
| GAAAATGTCTACATTGACAA+AGG | - | chr7_1:66677226-66677245 | Msa1031910:CDS | 30.0% | |
| TAAGCTGTAAAATGACATCT+AGG | + | chr7_1:66677466-66677485 | None:intergenic | 30.0% | |
| CCTAATAAACTAAAACCCAA+AGG | + | chr7_1:66677519-66677538 | None:intergenic | 30.0% | |
| !!! | CCTTTGGGTTTTAGTTTATT+AGG | - | chr7_1:66677516-66677535 | Msa1031910:intron | 30.0% |
| GCTTTATGCTAATATTCATC+TGG | - | chr7_1:66677538-66677557 | Msa1031910:intron | 30.0% | |
| ATCCAAAAGAACATAGATTG+GGG | + | chr7_1:66677638-66677657 | None:intergenic | 30.0% | |
| GTAATTTATGTAGGAAATGG+GGG | - | chr7_1:66677865-66677884 | Msa1031910:intron | 30.0% | |
| TGTTGTAGAAATCATGATCA+TGG | + | chr7_1:66678004-66678023 | None:intergenic | 30.0% | |
| TGGTCATGTTTCAATATTTC+CGG | - | chr7_1:66678782-66678801 | Msa1031910:intron | 30.0% | |
| CTTTGATGTCAAGTTTGAAA+CGG | + | chr7_1:66679021-66679040 | None:intergenic | 30.0% | |
| !! | AATTTTTCATGCATTGATGC+AGG | - | chr7_1:66679191-66679210 | Msa1031910:intron | 30.0% |
| GGAAACTTCATTAGTTGTAT+AGG | - | chr7_1:66679212-66679231 | Msa1031910:intron | 30.0% | |
| TCTTTCAGAACTGTTATGTA+AGG | - | chr7_1:66679266-66679285 | Msa1031910:CDS | 30.0% | |
| CATGAATTCTTCTCATTCTC+TGG | - | chr7_1:66676333-66676352 | Msa1031910:three_prime_UTR | 35.0% | |
| TTGAACACATTCAGATCGTT+AGG | - | chr7_1:66676361-66676380 | Msa1031910:exon | 35.0% | |
| GTTCTTGAAGGTAAATTTGG+AGG | - | chr7_1:66676471-66676490 | Msa1031910:intron | 35.0% | |
| TTGAAGGTAAATTTGGAGGA+GGG | - | chr7_1:66676475-66676494 | Msa1031910:intron | 35.0% | |
| AACACCCCATGATTTATTTG+TGG | + | chr7_1:66676508-66676527 | None:intergenic | 35.0% | |
| ! | AACATAATGGGACAGTTACT+AGG | - | chr7_1:66676589-66676608 | Msa1031910:CDS | 35.0% |
| ! | TTTGCTTGTTGCAGAGAATA+TGG | - | chr7_1:66676813-66676832 | Msa1031910:intron | 35.0% |
| AATGTCACAAATGCAGTCTT+TGG | + | chr7_1:66676843-66676862 | None:intergenic | 35.0% | |
| !!! | AAAGTTTGTTTTTGGAGCTG+TGG | - | chr7_1:66676924-66676943 | Msa1031910:intron | 35.0% |
| !!! | TTTGATTTTTGGAGTCGGTT+TGG | - | chr7_1:66676966-66676985 | Msa1031910:intron | 35.0% |
| !!! | TTGATTTTTGGAGTCGGTTT+GGG | - | chr7_1:66676967-66676986 | Msa1031910:intron | 35.0% |
| !!! | AGTTTTGGTTGTGAAGAAGT+TGG | + | chr7_1:66677110-66677129 | None:intergenic | 35.0% |
| ! | TTCCCCAATCTATGTTCTTT+TGG | - | chr7_1:66677633-66677652 | Msa1031910:intron | 35.0% |
| ATAAGCTCAATCGCAAAAAC+AGG | + | chr7_1:66678041-66678060 | None:intergenic | 35.0% | |
| !! | TGTTTTTGCGATTGAGCTTA+TGG | - | chr7_1:66678040-66678059 | Msa1031910:intron | 35.0% |
| TACTGTACTACATCTCTTTC+AGG | - | chr7_1:66678065-66678084 | Msa1031910:intron | 35.0% | |
| ACTAAGATATACTCTTCCAC+CGG | + | chr7_1:66678100-66678119 | None:intergenic | 35.0% | |
| TCTTAGTAAAGCACAAGATG+TGG | - | chr7_1:66678113-66678132 | Msa1031910:intron | 35.0% | |
| ! | AGTTCTTTTGACAAGAGAGT+TGG | - | chr7_1:66678243-66678262 | Msa1031910:intron | 35.0% |
| CTTCACTTTCTCATTCACTA+CGG | + | chr7_1:66678298-66678317 | None:intergenic | 35.0% | |
| AGTATCATTCAACTTCCTCT+CGG | + | chr7_1:66678376-66678395 | None:intergenic | 35.0% | |
| !!! | TTCAAACCTGCTTGTTTTGA+CGG | + | chr7_1:66678406-66678425 | None:intergenic | 35.0% |
| AAACAAGCAGGTTTGAACTT+TGG | - | chr7_1:66678409-66678428 | Msa1031910:intron | 35.0% | |
| CAGATGCTGCAATGAATTTA+AGG | + | chr7_1:66678447-66678466 | None:intergenic | 35.0% | |
| ATTTAGGGGCCTATTTAGTT+TGG | - | chr7_1:66678545-66678564 | Msa1031910:intron | 35.0% | |
| AATATGTGTGTAGGAATCAG+TGG | + | chr7_1:66678675-66678694 | None:intergenic | 35.0% | |
| CCTGTTTACAATATGTGTGT+AGG | + | chr7_1:66678684-66678703 | None:intergenic | 35.0% | |
| CCTACACACATATTGTAAAC+AGG | - | chr7_1:66678681-66678700 | Msa1031910:intron | 35.0% | |
| TGTTTCAATATTTCCGGAGT+TGG | - | chr7_1:66678788-66678807 | Msa1031910:intron | 35.0% | |
| ATATCATTTCTCACCAACTC+CGG | + | chr7_1:66678804-66678823 | None:intergenic | 35.0% | |
| GTCAAATTAATACAGCCACA+AGG | + | chr7_1:66678843-66678862 | None:intergenic | 35.0% | |
| CGTTTCAAACTTGACATCAA+AGG | - | chr7_1:66679019-66679038 | Msa1031910:intron | 35.0% | |
| TCAAACTTGACATCAAAGGT+TGG | - | chr7_1:66679023-66679042 | Msa1031910:intron | 35.0% | |
| ! | AGCTGTTGCTTCTATGTAAT+TGG | - | chr7_1:66679409-66679428 | Msa1031910:intron | 35.0% |
| CTATTGACAAAGGTAAAGAG+GGG | + | chr7_1:66679453-66679472 | None:intergenic | 35.0% | |
| CCTATTGACAAAGGTAAAGA+GGG | + | chr7_1:66679454-66679473 | None:intergenic | 35.0% | |
| TCCTATTGACAAAGGTAAAG+AGG | + | chr7_1:66679455-66679474 | None:intergenic | 35.0% | |
| ACAAGGCAAGGAAAAGGAAT+AGG | + | chr7_1:66675992-66676011 | None:intergenic | 40.0% | |
| GAAGAGTCGTTGAAGAGAAA+AGG | + | chr7_1:66676099-66676118 | None:intergenic | 40.0% | |
| TTTCAGATCTAGCTACTGAG+AGG | - | chr7_1:66676304-66676323 | Msa1031910:three_prime_UTR | 40.0% | |
| TTCAGATCTAGCTACTGAGA+GGG | - | chr7_1:66676305-66676324 | Msa1031910:three_prime_UTR | 40.0% | |
| ACACATTCAGATCGTTAGGT+TGG | - | chr7_1:66676365-66676384 | Msa1031910:exon | 40.0% | |
| CTTGAAGGTAAATTTGGAGG+AGG | - | chr7_1:66676474-66676493 | Msa1031910:intron | 40.0% | |
| TTGTTGGGGGTTACATATGT+AGG | - | chr7_1:66676629-66676648 | Msa1031910:CDS | 40.0% | |
| TGTTGGGGGTTACATATGTA+GGG | - | chr7_1:66676630-66676649 | Msa1031910:CDS | 40.0% | |
| CAACATGAGCAACCATCATA+TGG | + | chr7_1:66676791-66676810 | None:intergenic | 40.0% | |
| AATGCAATTTCAAGCGCTCT+GGG | + | chr7_1:66676873-66676892 | None:intergenic | 40.0% | |
| TAATGCAATTTCAAGCGCTC+TGG | + | chr7_1:66676874-66676893 | None:intergenic | 40.0% | |
| AGAAGCTCCCATAAAACAGA+AGG | - | chr7_1:66677176-66677195 | Msa1031910:intron | 40.0% | |
| AACAGAAGGTAATCTAAGCC+AGG | - | chr7_1:66677190-66677209 | Msa1031910:CDS | 40.0% | |
| ! | AGGTAATCTAAGCCAGGTTT+TGG | - | chr7_1:66677196-66677215 | Msa1031910:CDS | 40.0% |
| TTTGCAACATAGTTCTCGAC+TGG | + | chr7_1:66677761-66677780 | None:intergenic | 40.0% | |
| ATTTATGTAGGAAATGGGGG+TGG | - | chr7_1:66677868-66677887 | Msa1031910:intron | 40.0% | |
| ! | TTTTACCTCAGTATTCGACG+CGG | + | chr7_1:66677927-66677946 | None:intergenic | 40.0% |
| ATCATGGTTAACTGCTCATC+AGG | + | chr7_1:66677988-66678007 | None:intergenic | 40.0% | |
| TGTACTACATCTCTTTCAGG+AGG | - | chr7_1:66678068-66678087 | Msa1031910:intron | 40.0% | |
| CTAAGATATACTCTTCCACC+GGG | + | chr7_1:66678099-66678118 | None:intergenic | 40.0% | |
| AGATGTGGTTACAACTATGC+TGG | - | chr7_1:66678128-66678147 | Msa1031910:intron | 40.0% | |
| GTTACAACTATGCTGGCAAA+AGG | - | chr7_1:66678135-66678154 | Msa1031910:intron | 40.0% | |
| AACTATGCTGGCAAAAGGAT+CGG | - | chr7_1:66678140-66678159 | Msa1031910:intron | 40.0% | |
| CTGACAGAGAAATTGACAGT+TGG | - | chr7_1:66678267-66678286 | Msa1031910:intron | 40.0% | |
| GAGAGGAAGTTGAATGATAC+TGG | - | chr7_1:66678375-66678394 | Msa1031910:intron | 40.0% | |
| GTTAACTGGTGCATTTAGCA+AGG | - | chr7_1:66678941-66678960 | Msa1031910:intron | 40.0% | |
| TCGAGAGAACTTATATCGAG+TGG | - | chr7_1:66679108-66679127 | Msa1031910:intron | 40.0% | |
| GTATAGGCCAGAATTTCAGA+AGG | - | chr7_1:66679228-66679247 | Msa1031910:CDS | 40.0% | |
| !! | CTTGAGACCTTCTGAAATTC+TGG | + | chr7_1:66679238-66679257 | None:intergenic | 40.0% |
| TTTCAGAAGGTCTCAAGTGA+AGG | - | chr7_1:66679241-66679260 | Msa1031910:CDS | 40.0% | |
| AAGGTAAAGAGGGGAAAAAG+AGG | + | chr7_1:66679444-66679463 | None:intergenic | 40.0% | |
| CCCTCTTTACCTTTGTCAAT+AGG | - | chr7_1:66679451-66679470 | Msa1031910:intron | 40.0% | |
| TGTGTGACAAGGCAAGGAAA+AGG | + | chr7_1:66675998-66676017 | None:intergenic | 45.0% | |
| AGAGAATGTGTGACAAGGCA+AGG | + | chr7_1:66676004-66676023 | None:intergenic | 45.0% | |
| GAGAGAGAGAATGTGTGACA+AGG | + | chr7_1:66676009-66676028 | None:intergenic | 45.0% | |
| ACTGACCTTTGCAGATGCAT+TGG | + | chr7_1:66678226-66678245 | None:intergenic | 45.0% | |
| GAATGAGAAAGTGAAGTCCG+TGG | - | chr7_1:66678302-66678321 | Msa1031910:intron | 45.0% | |
| AACATGTAGCCTCTGATCCA+CGG | + | chr7_1:66678322-66678341 | None:intergenic | 45.0% | |
| TTTGGTACCATATAGGCCGA+TGG | - | chr7_1:66678762-66678781 | Msa1031910:intron | 45.0% | |
| AACATGACCATCGGCCTATA+TGG | + | chr7_1:66678772-66678791 | None:intergenic | 45.0% | |
| TCACATGTACATGGACCTTG+TGG | - | chr7_1:66678825-66678844 | Msa1031910:intron | 45.0% | |
| ATGTGACTGCTGGAACAACA+TGG | - | chr7_1:66678919-66678938 | Msa1031910:intron | 45.0% | |
| GCTGGAACAACATGGTTAAC+TGG | - | chr7_1:66678927-66678946 | Msa1031910:intron | 45.0% | |
| AACTGGTGCATTTAGCAAGG+TGG | - | chr7_1:66678944-66678963 | Msa1031910:intron | 45.0% | |
| TGCATTTAGCAAGGTGGCAA+GGG | - | chr7_1:66678950-66678969 | Msa1031910:intron | 45.0% | |
| !!! | AAAATTTTATATTTGTATTT+AGG | + | chr7_1:66677951-66677970 | None:intergenic | 5.0% |
| !!! | ATTTTTATATTAAATTGTTA+TGG | - | chr7_1:66678477-66678496 | Msa1031910:intron | 5.0% |
| GTACAGTTACCTGCGTCTCA+CGG | + | chr7_1:66677784-66677803 | None:intergenic | 50.0% | |
| CTCTTTCAGGAGGAGAAACC+CGG | - | chr7_1:66678078-66678097 | Msa1031910:intron | 50.0% | |
| GACTGCCAATGCATCTGCAA+AGG | - | chr7_1:66678218-66678237 | Msa1031910:intron | 50.0% | |
| AAGTGAAGTCCGTGGATCAG+AGG | - | chr7_1:66678310-66678329 | Msa1031910:intron | 50.0% | |
| CAGCAATATTTGCAGCCGAG+AGG | - | chr7_1:66678358-66678377 | Msa1031910:intron | 50.0% | |
| GATCAGCCGTCAAAACAAGC+AGG | - | chr7_1:66678397-66678416 | Msa1031910:intron | 50.0% | |
| GCATGCAGATATGTGACTGC+TGG | - | chr7_1:66678909-66678928 | Msa1031910:intron | 50.0% | |
| GTGCATTTAGCAAGGTGGCA+AGG | - | chr7_1:66678949-66678968 | Msa1031910:intron | 50.0% | |
| TGTTGCAAACCGTGAGACGC+AGG | - | chr7_1:66677772-66677791 | Msa1031910:intron | 55.0% | |
| GTATTCGACGCGGCATCTTC+AGG | + | chr7_1:66677917-66677936 | None:intergenic | 55.0% | |
| AGATGCCGCGTCGAATACTG+AGG | - | chr7_1:66677919-66677938 | Msa1031910:intron | 55.0% | |
| TTTCAGGAGGAGAAACCCGG+TGG | - | chr7_1:66678081-66678100 | Msa1031910:intron | 55.0% | |
| TTTAGCAAGGTGGCAAGGGC+TGG | - | chr7_1:66678954-66678973 | Msa1031910:intron | 55.0% | |
| GCAAGGGCTGGAAACGTTGC+TGG | - | chr7_1:66678966-66678985 | Msa1031910:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 66675968 | 66679635 | 66675968 | ID=Msa1031910;Name=Msa1031910 |
| chr7_1 | mRNA | 66675968 | 66679635 | 66675968 | ID=Msa1031910-mRNA-1;Parent=Msa1031910;Name=Msa1031910-mRNA-1;_AED=0.10;_eAED=0.10;_QI=158|1|1|1|0.87|0.77|9|402|265 |
| chr7_1 | exon | 66675968 | 66676390 | 66675968 | ID=Msa1031910-mRNA-1:exon:15057;Parent=Msa1031910-mRNA-1 |
| chr7_1 | exon | 66676563 | 66676686 | 66676563 | ID=Msa1031910-mRNA-1:exon:15056;Parent=Msa1031910-mRNA-1 |
| chr7_1 | exon | 66677185 | 66677516 | 66677185 | ID=Msa1031910-mRNA-1:exon:15055;Parent=Msa1031910-mRNA-1 |
| chr7_1 | exon | 66677663 | 66677725 | 66677663 | ID=Msa1031910-mRNA-1:exon:15054;Parent=Msa1031910-mRNA-1 |
| chr7_1 | exon | 66677810 | 66677881 | 66677810 | ID=Msa1031910-mRNA-1:exon:15053;Parent=Msa1031910-mRNA-1 |
| chr7_1 | exon | 66678701 | 66678776 | 66678701 | ID=Msa1031910-mRNA-1:exon:15052;Parent=Msa1031910-mRNA-1 |
| chr7_1 | exon | 66679221 | 66679324 | 66679221 | ID=Msa1031910-mRNA-1:exon:15051;Parent=Msa1031910-mRNA-1 |
| chr7_1 | exon | 66679452 | 66679555 | 66679452 | ID=Msa1031910-mRNA-1:exon:15050;Parent=Msa1031910-mRNA-1 |
| chr7_1 | exon | 66679576 | 66679635 | 66679576 | ID=Msa1031910-mRNA-1:exon:15049;Parent=Msa1031910-mRNA-1 |
| chr7_1 | five_prime_UTR | 66679576 | 66679635 | 66679576 | ID=Msa1031910-mRNA-1:five_prime_utr;Parent=Msa1031910-mRNA-1 |
| chr7_1 | five_prime_UTR | 66679458 | 66679555 | 66679458 | ID=Msa1031910-mRNA-1:five_prime_utr;Parent=Msa1031910-mRNA-1 |
| chr7_1 | CDS | 66679452 | 66679457 | 66679452 | ID=Msa1031910-mRNA-1:cds;Parent=Msa1031910-mRNA-1 |
| chr7_1 | CDS | 66679221 | 66679324 | 66679221 | ID=Msa1031910-mRNA-1:cds;Parent=Msa1031910-mRNA-1 |
| chr7_1 | CDS | 66678701 | 66678776 | 66678701 | ID=Msa1031910-mRNA-1:cds;Parent=Msa1031910-mRNA-1 |
| chr7_1 | CDS | 66677810 | 66677881 | 66677810 | ID=Msa1031910-mRNA-1:cds;Parent=Msa1031910-mRNA-1 |
| chr7_1 | CDS | 66677663 | 66677725 | 66677663 | ID=Msa1031910-mRNA-1:cds;Parent=Msa1031910-mRNA-1 |
| chr7_1 | CDS | 66677185 | 66677516 | 66677185 | ID=Msa1031910-mRNA-1:cds;Parent=Msa1031910-mRNA-1 |
| chr7_1 | CDS | 66676563 | 66676686 | 66676563 | ID=Msa1031910-mRNA-1:cds;Parent=Msa1031910-mRNA-1 |
| chr7_1 | CDS | 66676370 | 66676390 | 66676370 | ID=Msa1031910-mRNA-1:cds;Parent=Msa1031910-mRNA-1 |
| chr7_1 | three_prime_UTR | 66675968 | 66676369 | 66675968 | ID=Msa1031910-mRNA-1:three_prime_utr;Parent=Msa1031910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
