AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1398890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1398890 MtrunA17_Chr7g0271681 94.094 491 28 1 109 598 1 491 0.0 931
Msa1398890 MtrunA17_Chr7g0271671 57.825 607 199 14 1 596 1 561 0.0 608
Msa1398890 MtrunA17_Chr7g0271691 50.207 482 201 12 114 590 77 524 1.60e-132 397
Msa1398890 MtrunA17_Chr2g0304831 29.565 575 316 20 64 590 53 586 8.22e-51 184
Msa1398890 MtrunA17_Chr6g0484121 34.375 352 207 9 61 406 48 381 1.85e-49 179
Msa1398890 MtrunA17_Chr8g0391211 33.023 430 239 14 65 469 121 526 9.83e-49 178
Msa1398890 MtrunA17_Chr6g0484111 34.091 352 208 9 61 406 48 381 6.47e-48 174
Msa1398890 MtrunA17_Chr4g0059411 29.014 517 314 17 98 596 65 546 4.38e-47 173
Msa1398890 MtrunA17_Chr6g0484131 34.375 352 207 9 61 406 48 381 9.93e-47 171
Msa1398890 MtrunA17_Chr4g0048161 36.644 292 175 6 118 404 96 382 5.08e-46 172
Msa1398890 MtrunA17_Chr4g0072691 33.526 346 208 9 64 404 22 350 6.34e-46 171
Msa1398890 MtrunA17_Chr2g0281171 34.104 346 206 9 64 404 55 383 2.65e-45 170
Msa1398890 MtrunA17_Chr8g0391221 34.746 354 195 11 65 406 50 379 3.66e-45 166
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1398890 AT5G26920.3 42.321 293 153 7 115 405 83 361 1.38e-62 213
Msa1398890 AT5G26920.1 34.813 428 230 14 99 512 63 455 7.33e-62 214
Msa1398890 AT5G26920.2 35.135 407 213 13 115 512 83 447 9.58e-59 206
Msa1398890 AT5G57580.1 38.305 295 172 6 116 405 92 381 1.76e-52 191
Msa1398890 AT4G25800.1 35.735 347 203 9 64 405 39 370 2.76e-51 186
Msa1398890 AT4G25800.2 35.735 347 203 9 64 405 39 370 2.76e-51 186
Msa1398890 AT2G24300.3 35.838 346 201 11 65 405 51 380 1.09e-47 176
Msa1398890 AT2G24300.2 35.838 346 201 11 65 405 47 376 1.14e-47 176
Msa1398890 AT2G24300.1 37.288 295 175 7 116 405 40 329 1.24e-47 175
Msa1398890 AT4G31000.1 29.889 542 329 18 64 590 50 555 5.85e-47 174
Msa1398890 AT2G18750.3 34.104 346 204 10 64 404 56 382 1.94e-45 170
Msa1398890 AT2G18750.2 34.104 346 204 10 64 404 56 382 1.94e-45 170
Msa1398890 AT2G18750.1 34.104 346 204 10 64 404 56 382 1.94e-45 170
Msa1398890 AT5G62570.2 37.288 295 175 8 116 406 69 357 4.59e-43 161
Msa1398890 AT5G62570.1 33.156 377 224 12 37 406 17 372 9.14e-43 161
Msa1398890 AT5G62570.4 39.163 263 152 7 116 374 84 342 1.11e-42 157
Msa1398890 AT1G73805.1 34.262 359 209 11 118 470 90 427 3.40e-42 158
Msa1398890 AT4G31000.2 28.776 490 293 17 116 590 86 534 4.00e-37 145
Msa1398890 AT5G62570.3 43.204 206 113 4 116 319 84 287 8.07e-37 139

Find 137 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGAAAATTACAACTTATA+TGG 0.249341 tig0022300:-59056 Msa1398890:CDS
TGTCTTTAATGCAATTTATA+AGG 0.254202 tig0022300:-60419 Msa1398890:CDS
AAACAAGTTTGCATTCTTCT+TGG 0.267253 tig0022300:+58887 None:intergenic
TCAAATGGGTCATATCAATA+AGG 0.272106 tig0022300:-58923 Msa1398890:CDS
CGAACATCCAGGACCTTAAA+AGG 0.293535 tig0022300:+60979 None:intergenic
TTTAACTAATTAGACTCTTC+TGG 0.293867 tig0022300:-58861 Msa1398890:exon
GCTTTGGGAAAATAGAAAAT+AGG 0.294223 tig0022300:-60556 Msa1398890:intron
CTCTCTTAATGAAGCTTCAT+TGG 0.301175 tig0022300:+60694 None:intergenic
CTAGAAAGTCAGACTGTTGC+AGG 0.314296 tig0022300:+60020 None:intergenic
AAAACACATACGGAAATAAA+AGG 0.316297 tig0022300:+62288 None:intergenic
AAGAGACATACCTTGGGTTT+AGG 0.317099 tig0022300:+61955 None:intergenic
CACCATATAGGACACATAAT+TGG 0.319161 tig0022300:+61244 None:intergenic
ATTCACCGAAGAGATTATAT+TGG 0.324570 tig0022300:-62463 Msa1398890:five_prime_UTR
CCAAGTGTTGTTGTATCAAT+TGG 0.338990 tig0022300:+60100 None:intergenic
ATCCAATTATGTGTCCTATA+TGG 0.346907 tig0022300:-61246 Msa1398890:CDS
ATTATATTGGAATTATTAGA+TGG 0.356592 tig0022300:-62450 Msa1398890:exon
TGTGGTATTTCTCTTATGTC+TGG 0.356952 tig0022300:+59206 None:intergenic
ACCTCCCTCAGCTTTGATCC+TGG 0.359913 tig0022300:+61344 None:intergenic
ATTCAATTGGAGTGTGCATT+CGG 0.364879 tig0022300:-61017 Msa1398890:CDS
TAATATCCTCAATTCCTCTA+TGG 0.371453 tig0022300:-59000 Msa1398890:CDS
TTTCCAGTCCATTCATTAAG+AGG 0.372527 tig0022300:-61912 Msa1398890:intron
TTAAAGACAAGGAACGATAT+TGG 0.379176 tig0022300:+60433 None:intergenic
ACGCTTATGTCCAACACATT+TGG 0.388946 tig0022300:-61426 Msa1398890:CDS
ATAGTTCAATCAAATTCAAT+TGG 0.395077 tig0022300:-61030 Msa1398890:CDS
GCAAGATTGCAAGGAATTCA+TGG 0.398753 tig0022300:-60534 Msa1398890:CDS
GACTTTGTGAAAATTCTGTT+TGG 0.402548 tig0022300:+61366 None:intergenic
AGGTTGGGATTGCTATCAAA+TGG 0.410010 tig0022300:-58938 Msa1398890:CDS
TACATTGATGGGGATGGTTA+TGG 0.410884 tig0022300:-59158 Msa1398890:CDS
GGAACCCTTACTTCGAAAAC+TGG 0.411784 tig0022300:-62151 Msa1398890:CDS
TTCAATTGGAGTGTGCATTC+GGG 0.412066 tig0022300:-61016 Msa1398890:CDS
GACACATAATTGGATCTTCA+TGG 0.423184 tig0022300:+61254 None:intergenic
CCAATTGATACAACAACACT+TGG 0.429867 tig0022300:-60100 Msa1398890:CDS
ACAACAACACTTGGATTGGC+GGG 0.430460 tig0022300:-60091 Msa1398890:CDS
AGGGAAGAAACGGTCAATTT+CGG 0.433035 tig0022300:-61065 Msa1398890:CDS
CGCTTAGTACTGCTGGTTGA+AGG 0.436286 tig0022300:+62362 None:intergenic
CAAATGGGTCATATCAATAA+GGG 0.436324 tig0022300:-58922 Msa1398890:CDS
GTCCTGGATGTTCGAGGAAA+GGG 0.442948 tig0022300:-60970 Msa1398890:intron
ATTTCTCTTATGTCTGGCAC+TGG 0.445144 tig0022300:+59212 None:intergenic
TCATGGAATACAAACTGTTA+AGG 0.451447 tig0022300:-60738 Msa1398890:CDS
GAATAGCCACCTTCTACAAC+TGG 0.452656 tig0022300:+59125 None:intergenic
TCATGTTGATATCGATTGCC+AGG 0.453327 tig0022300:-58829 Msa1398890:three_prime_UTR
CTCTACTTCATATGTTAATG+AGG 0.454792 tig0022300:-59264 Msa1398890:CDS
AATTCAAACCTCTTAATGAA+TGG 0.457435 tig0022300:+61904 None:intergenic
GAATTCATTACACTAAGAAA+TGG 0.459824 tig0022300:-61132 Msa1398890:CDS
ATCTCTAAACCAGCAAGAAA+AGG 0.460286 tig0022300:-60350 Msa1398890:intron
GAACCGAGAAGAACAACAAA+AGG 0.470127 tig0022300:-62321 Msa1398890:CDS
TGATACAACAACACTTGGAT+TGG 0.474933 tig0022300:-60095 Msa1398890:CDS
ATCATTCAAAGTTTATATGT+TGG 0.481522 tig0022300:-58604 Msa1398890:three_prime_UTR
TAATGCAATTTATAAGGTTG+TGG 0.483276 tig0022300:-60413 Msa1398890:CDS
AAGTAAGGGTTCCAAGCAAA+AGG 0.485530 tig0022300:+62161 None:intergenic
GACAAGCAGTTGGCCTCTCA+TGG 0.486364 tig0022300:-60755 Msa1398890:CDS
TAATTCCAATATAATCTCTT+CGG 0.493072 tig0022300:+62458 None:intergenic
AAAGCAGTGTGGTGTAAGGT+TGG 0.498718 tig0022300:-58954 Msa1398890:CDS
AAGCGAATAAAACAACATCA+TGG 0.498950 tig0022300:-62344 Msa1398890:CDS
ATGAGGTATGGCGTCTGAAA+GGG 0.499358 tig0022300:-60799 Msa1398890:CDS
TACAACAACACTTGGATTGG+CGG 0.500047 tig0022300:-60092 Msa1398890:CDS
GAGCTGAAATGTACATTGAT+GGG 0.500184 tig0022300:-59169 Msa1398890:CDS
ATCAAAAGCAGTGTGGTGTA+AGG 0.502186 tig0022300:-58958 Msa1398890:CDS
GAAACGGTCAATTTCGGCTA+GGG 0.507035 tig0022300:-61059 Msa1398890:CDS
TTTAAGGTCCTGGATGTTCG+AGG 0.509003 tig0022300:-60976 Msa1398890:CDS
TTCATATGTTAATGAGGGAA+TGG 0.510467 tig0022300:-59258 Msa1398890:CDS
TCGGTGAATCAAATAGTTAG+TGG 0.511085 tig0022300:+62477 None:intergenic
GATATATCAAAGGGAAGAAA+CGG 0.511181 tig0022300:-61075 Msa1398890:CDS
GCACTGGATCAACATAGATC+TGG 0.511948 tig0022300:+59228 None:intergenic
CTTACAAACATTTCAATGAT+CGG 0.513255 tig0022300:-60132 Msa1398890:CDS
AGCATTAAAGAGACATACCT+TGG 0.517093 tig0022300:+61948 None:intergenic
TCAAATTGCACCTCCAAGAG+AGG 0.517774 tig0022300:-61181 Msa1398890:CDS
AAGCAGTGTGGTGTAAGGTT+GGG 0.517845 tig0022300:-58953 Msa1398890:CDS
ACTCCATCTTACACGTCTCT+TGG 0.521160 tig0022300:+58704 None:intergenic
GGAGCTGAAATGTACATTGA+TGG 0.523170 tig0022300:-59170 Msa1398890:CDS
CAGCCAAGAGACGTGTAAGA+TGG 0.524274 tig0022300:-58707 Msa1398890:three_prime_UTR
AGAAAATAGGCAAGATTGCA+AGG 0.529169 tig0022300:-60543 Msa1398890:CDS
GGAAAAGAAGAACTGTTGAA+AGG 0.529919 tig0022300:-61159 Msa1398890:CDS
GATGAGGTATGGCGTCTGAA+AGG 0.532114 tig0022300:-60800 Msa1398890:CDS
GACTTTCTAGTTTGTCAGCA+AGG 0.534248 tig0022300:-60007 Msa1398890:intron
TACCCTTTCCTCGAACATCC+AGG 0.537589 tig0022300:+60968 None:intergenic
ATATATCCATAGAGGAATTG+AGG 0.540392 tig0022300:+58994 None:intergenic
AACAGTTTGTATTCCATGAG+AGG 0.541937 tig0022300:+60742 None:intergenic
GAGTTTACAGATATATCAAA+GGG 0.542863 tig0022300:-61084 Msa1398890:CDS
GCATTAAAGAGACATACCTT+GGG 0.547040 tig0022300:+61949 None:intergenic
GGTTGGGATTGCTATCAAAT+GGG 0.547074 tig0022300:-58937 Msa1398890:CDS
AAATCAGCAACGCGTAGTCA+TGG 0.550182 tig0022300:-61289 Msa1398890:CDS
AAACCTCTTAATGAATGGAC+TGG 0.550241 tig0022300:+61909 None:intergenic
CATACGGAAATAAAAGGTGT+TGG 0.554012 tig0022300:+62294 None:intergenic
TGAGTTTACAGATATATCAA+AGG 0.556394 tig0022300:-61085 Msa1398890:CDS
TGCAATTTATAAGGTTGTGG+AGG 0.556418 tig0022300:-60410 Msa1398890:CDS
TCTACTTCATATGTTAATGA+GGG 0.557125 tig0022300:-59263 Msa1398890:CDS
GGCTCGCATGTTGCATACAT+AGG 0.557498 tig0022300:+59077 None:intergenic
CATCGTTGAATGATGAGGTA+TGG 0.559097 tig0022300:-60811 Msa1398890:CDS
CATACCTTGGGTTTAGGTGG+CGG 0.565063 tig0022300:+61961 None:intergenic
GTTGTTGTATCAATTGGCAA+TGG 0.566856 tig0022300:+60106 None:intergenic
TCACGCAGTTCAATTTGAAG+TGG 0.568198 tig0022300:+61318 None:intergenic
AGACATACCTTGGGTTTAGG+TGG 0.570711 tig0022300:+61958 None:intergenic
AGGAATTGAGGATATTAACA+TGG 0.571805 tig0022300:+59006 None:intergenic
AGCGAATAAAACAACATCAT+GGG 0.573517 tig0022300:-62343 Msa1398890:CDS
GGTCCTGGATGTTCGAGGAA+AGG 0.575080 tig0022300:-60971 Msa1398890:CDS
CAAATTGCACCTCCAAGAGA+GGG 0.582196 tig0022300:-61180 Msa1398890:CDS
ACTGCTTGATATATCCATAG+AGG 0.587495 tig0022300:+58986 None:intergenic
CAACGCGTAGTCATGGAAGA+AGG 0.592392 tig0022300:-61282 Msa1398890:CDS
ATGTGCTTAGTAGTAAGTCT+AGG 0.593338 tig0022300:-58802 Msa1398890:three_prime_UTR
TCTTGGCTGCAATTTGAACA+AGG 0.593948 tig0022300:+58721 None:intergenic
GTGTCATTGACAGCGCTTGG+TGG 0.595299 tig0022300:-60173 Msa1398890:intron
ACGTCTCCTTCCAAATGTGT+TGG 0.598433 tig0022300:+61416 None:intergenic
TGTAGAAGGTGGCTATTCGA+TGG 0.598654 tig0022300:-59120 Msa1398890:CDS
ACTACTAAGCACATTCAACC+TGG 0.599826 tig0022300:+58811 None:intergenic
AAACGGTCAATTTCGGCTAG+GGG 0.604248 tig0022300:-61058 Msa1398890:CDS
CAATGAAGCTTCATTAAGAG+AGG 0.604707 tig0022300:-60693 Msa1398890:intron
GTTCCTCAACCAGATACAAG+AGG 0.606042 tig0022300:-61991 Msa1398890:intron
AGAAACGGTCAATTTCGGCT+AGG 0.609606 tig0022300:-61060 Msa1398890:CDS
ATTGGAGTGTGCATTCGGGA+AGG 0.610490 tig0022300:-61012 Msa1398890:CDS
CCCTTACTTCGAAAACTGGT+AGG 0.615424 tig0022300:-62147 Msa1398890:intron
CAACAACACTTGGATTGGCG+GGG 0.619083 tig0022300:-60090 Msa1398890:CDS
AAGTCCAGGATCAAAGCTGA+GGG 0.620476 tig0022300:-61348 Msa1398890:CDS
ACACTATAATATTGCACAGG+AGG 0.620983 tig0022300:+58681 None:intergenic
ATAGTGTTAACATAATGTGT+AGG 0.623630 tig0022300:-58665 Msa1398890:three_prime_UTR
TTATGTCCAACACATTTGGA+AGG 0.624378 tig0022300:-61422 Msa1398890:CDS
TATAAATTGCATTAAAGACA+AGG 0.627430 tig0022300:+60422 None:intergenic
AAAAGAGGATTGGACTGCTG+AGG 0.631415 tig0022300:-61214 Msa1398890:CDS
AAAGTCCAGGATCAAAGCTG+AGG 0.634583 tig0022300:-61349 Msa1398890:CDS
CAAGCAAAAGGCGAATGCAG+TGG 0.634985 tig0022300:+62173 None:intergenic
TTAACACTATAATATTGCAC+AGG 0.636553 tig0022300:+58678 None:intergenic
TGGTAAACTTGACAAGCAGT+TGG 0.637384 tig0022300:-60765 Msa1398890:CDS
TAGTCGTAGTTGTGATGACA+AGG 0.637677 tig0022300:-62396 Msa1398890:CDS
TAGAAAGTCAGACTGTTGCA+GGG 0.643701 tig0022300:+60021 None:intergenic
ACATATGAAGTAGAGATACA+TGG 0.644934 tig0022300:+59272 None:intergenic
TCGTCCATCGTTGAATGATG+AGG 0.648172 tig0022300:-60816 Msa1398890:CDS
GTACAAAATGCACAATATGA+CGG 0.648816 tig0022300:-60055 Msa1398890:CDS
TTCACCGCCACCTAAACCCA+AGG 0.650298 tig0022300:-61965 Msa1398890:CDS
TCCAGGATCAAAGCTGAGGG+AGG 0.652637 tig0022300:-61345 Msa1398890:CDS
GGAATTGAGGATATTAACAT+GGG 0.655798 tig0022300:+59007 None:intergenic
ATTATTAGATGGCATCGAAG+AGG 0.671982 tig0022300:-62439 Msa1398890:exon
AGCTGAAATGTACATTGATG+GGG 0.679345 tig0022300:-59168 Msa1398890:CDS
ATACCACAAAACAATCATGT+CGG 0.681883 tig0022300:-59191 Msa1398890:CDS
GTGATAAATCAAAAGCAGTG+TGG 0.718101 tig0022300:-58965 Msa1398890:CDS
GAAATGTACATTGATGGGGA+TGG 0.735643 tig0022300:-59164 Msa1398890:CDS
ACATAATTGGATCTTCATGG+AGG 0.751325 tig0022300:+61257 None:intergenic
CATACCTCATCATTCAACGA+TGG 0.753671 tig0022300:+60812 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAATAAAACACATA+CGG + tig0022300:58753-58772 None:intergenic 10.0%
!! ATACTATTACTAATTAATAA+TGG - tig0022300:58975-58994 Msa1398890:CDS 10.0%
!! AAAGTAAATATATAAATCTT+GGG - tig0022300:59317-59336 Msa1398890:intron 10.0%
!!! ATGTAATAATATTGATTTAT+TGG + tig0022300:61530-61549 None:intergenic 10.0%
!! ATTATATTGGAATTATTAGA+TGG - tig0022300:58578-58597 Msa1398890:three_prime_UTR 15.0%
!! AATCCATTATTATAAATGTT+GGG + tig0022300:59195-59214 None:intergenic 15.0%
!! TAATCCATTATTATAAATGT+TGG + tig0022300:59196-59215 None:intergenic 15.0%
!!! ATGGATTATAATAATTTAAG+AGG - tig0022300:59208-59227 Msa1398890:CDS 15.0%
!! GAAAGTAAATATATAAATCT+TGG - tig0022300:59316-59335 Msa1398890:intron 15.0%
!!! TATTGATATTTGTTTTTGTT+TGG - tig0022300:59562-59581 Msa1398890:intron 15.0%
!! TAGTAATTAGCTATTAAAAT+AGG - tig0022300:60106-60125 Msa1398890:CDS 15.0%
!!! ATATTTTGAAATATTATGTG+TGG - tig0022300:60365-60384 Msa1398890:CDS 15.0%
!!! AACTAAATAAAGAAGTATTA+GGG + tig0022300:60412-60431 None:intergenic 15.0%
!!! TAATGTTGTATATGATTTTT+TGG - tig0022300:60450-60469 Msa1398890:CDS 15.0%
!! TAAATTTAAGAATCCATATA+AGG + tig0022300:60768-60787 None:intergenic 15.0%
!! TAATTCCAATATAATCTCTT+CGG + tig0022300:58573-58592 None:intergenic 20.0%
!! TAGTAATAGTATATACTACA+TGG + tig0022300:58967-58986 None:intergenic 20.0%
!! GAAATTGAGTTTATATCTTT+CGG + tig0022300:59502-59521 None:intergenic 20.0%
!! ATAGTTCAATCAAATTCAAT+TGG - tig0022300:59998-60017 Msa1398890:intron 20.0%
!!! CAACTAAATAAAGAAGTATT+AGG + tig0022300:60413-60432 None:intergenic 20.0%
!! TATAAATTGCATTAAAGACA+AGG + tig0022300:60609-60628 None:intergenic 20.0%
!! TGTCTTTAATGCAATTTATA+AGG - tig0022300:60609-60628 Msa1398890:intron 20.0%
!!! TACTATACACAACTATATTT+TGG + tig0022300:60806-60825 None:intergenic 20.0%
!! CTTCATGTATTTAAATATGA+GGG + tig0022300:61433-61452 None:intergenic 20.0%
!! TCTTCATGTATTTAAATATG+AGG + tig0022300:61434-61453 None:intergenic 20.0%
!!! ATATTGATTTATTGGTTTTC+TGG + tig0022300:61522-61541 None:intergenic 20.0%
!!! TATTTTACTATATCTTGTAC+AGG - tig0022300:61702-61721 Msa1398890:intron 20.0%
!! ATCATTCAAAGTTTATATGT+TGG - tig0022300:62424-62443 Msa1398890:CDS 20.0%
! AAAACACATACGGAAATAAA+AGG + tig0022300:58743-58762 None:intergenic 25.0%
! AGAAAGAAAGGAACATTTAA+AGG + tig0022300:58782-58801 None:intergenic 25.0%
! CAAATACTAGTAAGAAAGAA+AGG + tig0022300:58794-58813 None:intergenic 25.0%
! AATTCAAACCTCTTAATGAA+TGG + tig0022300:59127-59146 None:intergenic 25.0%
! ACTCCCAACATTTATAATAA+TGG - tig0022300:59189-59208 Msa1398890:CDS 25.0%
!!! ATTTAATATGAAGGAGTGTT+AGG - tig0022300:59282-59301 Msa1398890:CDS 25.0%
!!! TTTTGTTTGGAATTTAGTTG+TGG - tig0022300:59575-59594 Msa1398890:intron 25.0%
! GAATTCATTACACTAAGAAA+TGG - tig0022300:59896-59915 Msa1398890:intron 25.0%
! TGAGTTTACAGATATATCAA+AGG - tig0022300:59943-59962 Msa1398890:intron 25.0%
! GAGTTTACAGATATATCAAA+GGG - tig0022300:59944-59963 Msa1398890:intron 25.0%
! AGCTAATTACTAACATTTGT+CGG + tig0022300:60098-60117 None:intergenic 25.0%
!!! TGTATATGATTTTTTGGCTT+TGG - tig0022300:60456-60475 Msa1398890:CDS 25.0%
!!! GTATATGATTTTTTGGCTTT+GGG - tig0022300:60457-60476 Msa1398890:CDS 25.0%
! TAATGCAATTTATAAGGTTG+TGG - tig0022300:60615-60634 Msa1398890:intron 25.0%
! ATCTACCAACATTATGATAT+AGG + tig0022300:60717-60736 None:intergenic 25.0%
! CTTACAAACATTTCAATGAT+CGG - tig0022300:60896-60915 Msa1398890:intron 25.0%
!! ATATTCTGCATAAAACCTTT+TGG - tig0022300:61069-61088 Msa1398890:CDS 25.0%
!!! CTAGTAAAAGAAGCATTTAA+CGG + tig0022300:61222-61241 None:intergenic 25.0%
! AGACAAATATTGTGAAATGT+AGG - tig0022300:61297-61316 Msa1398890:CDS 25.0%
!! ACCAAATCTATGTTTTATCT+CGG + tig0022300:61461-61480 None:intergenic 25.0%
! TCTACTTCATATGTTAATGA+GGG - tig0022300:61765-61784 Msa1398890:intron 25.0%
!! CCATATAAGTTGTAATTTTC+TGG + tig0022300:61975-61994 None:intergenic 25.0%
! CCAGAAAATTACAACTTATA+TGG - tig0022300:61972-61991 Msa1398890:CDS 25.0%
! TTTAACTAATTAGACTCTTC+TGG - tig0022300:62167-62186 Msa1398890:CDS 25.0%
! TTAACACTATAATATTGCAC+AGG + tig0022300:62353-62372 None:intergenic 25.0%
! ATAGTGTTAACATAATGTGT+AGG - tig0022300:62363-62382 Msa1398890:CDS 25.0%
ATTCACCGAAGAGATTATAT+TGG - tig0022300:58565-58584 Msa1398890:three_prime_UTR 30.0%
AAGCGAATAAAACAACATCA+TGG - tig0022300:58684-58703 Msa1398890:three_prime_UTR 30.0%
AGCGAATAAAACAACATCAT+GGG - tig0022300:58685-58704 Msa1398890:three_prime_UTR 30.0%
TAAAGGGGAATATAGTAAGA+GGG + tig0022300:58925-58944 None:intergenic 30.0%
TAGTATATACTACATGGTGA+TGG + tig0022300:58961-58980 None:intergenic 30.0%
GAGTTAGTAGTATCAAAGTT+TGG + tig0022300:59004-59023 None:intergenic 30.0%
!! ATAAATCTTGGGTTGAAAAG+TGG - tig0022300:59328-59347 Msa1398890:intron 30.0%
!! CTTTACTTTTACCTGAACAA+CGG + tig0022300:59463-59482 None:intergenic 30.0%
GACTTTGTGAAAATTCTGTT+TGG + tig0022300:59665-59684 None:intergenic 30.0%
ATCCAATTATGTGTCCTATA+TGG - tig0022300:59782-59801 Msa1398890:intron 30.0%
!!! CTTTTTCAAAGTCACCATAT+AGG + tig0022300:59799-59818 None:intergenic 30.0%
! ATATGGTGACTTTGAAAAAG+AGG - tig0022300:59799-59818 Msa1398890:intron 30.0%
GATATATCAAAGGGAAGAAA+CGG - tig0022300:59953-59972 Msa1398890:intron 30.0%
TAATTACTAACATTTGTCGG+AGG + tig0022300:60095-60114 None:intergenic 30.0%
TCATGGAATACAAACTGTTA+AGG - tig0022300:60290-60309 Msa1398890:intron 30.0%
!! GCTTTGGGAAAATAGAAAAT+AGG - tig0022300:60472-60491 Msa1398890:CDS 30.0%
TTAAAGACAAGGAACGATAT+TGG + tig0022300:60598-60617 None:intergenic 30.0%
TGCATCCTATATCATAATGT+TGG - tig0022300:60709-60728 Msa1398890:CDS 30.0%
GTACAAAATGCACAATATGA+CGG - tig0022300:60973-60992 Msa1398890:CDS 30.0%
!!! AGTTTTGAAATGCATCCAAA+AGG + tig0022300:61087-61106 None:intergenic 30.0%
! GAAAAAGTCTCAAGTTGTAT+AGG - tig0022300:61107-61126 Msa1398890:CDS 30.0%
ATATCCTAATTCTATCTGTC+TGG - tig0022300:61195-61214 Msa1398890:CDS 30.0%
ATATTGTGAAATGTAGGCTA+AGG - tig0022300:61303-61322 Msa1398890:CDS 30.0%
GCTACATTTCACTATAACTT+CGG + tig0022300:61353-61372 None:intergenic 30.0%
!! GTTTTCAGGACAAATAGAAA+AGG + tig0022300:61385-61404 None:intergenic 30.0%
!!! CAGGATTATTACTAGTTTTC+AGG + tig0022300:61399-61418 None:intergenic 30.0%
CTGAAAACTAGTAATAATCC+TGG - tig0022300:61397-61416 Msa1398890:CDS 30.0%
TCCGAGATAAAACATAGATT+TGG - tig0022300:61457-61476 Msa1398890:intron 30.0%
TGTACAGGTCAAAAAGAAAT+TGG - tig0022300:61717-61736 Msa1398890:intron 30.0%
GTACAGGTCAAAAAGAAATT+GGG - tig0022300:61718-61737 Msa1398890:intron 30.0%
ACATATGAAGTAGAGATACA+TGG + tig0022300:61759-61778 None:intergenic 30.0%
CTCTACTTCATATGTTAATG+AGG - tig0022300:61764-61783 Msa1398890:intron 30.0%
TTCATATGTTAATGAGGGAA+TGG - tig0022300:61770-61789 Msa1398890:intron 30.0%
ATACCACAAAACAATCATGT+CGG - tig0022300:61837-61856 Msa1398890:intron 30.0%
GGAATTGAGGATATTAACAT+GGG + tig0022300:62024-62043 None:intergenic 30.0%
AGGAATTGAGGATATTAACA+TGG + tig0022300:62025-62044 None:intergenic 30.0%
TAATATCCTCAATTCCTCTA+TGG - tig0022300:62028-62047 Msa1398890:intron 30.0%
ATATATCCATAGAGGAATTG+AGG + tig0022300:62037-62056 None:intergenic 30.0%
TCAAATGGGTCATATCAATA+AGG - tig0022300:62105-62124 Msa1398890:intron 30.0%
CAAATGGGTCATATCAATAA+GGG - tig0022300:62106-62125 Msa1398890:intron 30.0%
AAACAAGTTTGCATTCTTCT+TGG + tig0022300:62144-62163 None:intergenic 30.0%
TCGGTGAATCAAATAGTTAG+TGG + tig0022300:58554-58573 None:intergenic 35.0%
! ATTATTAGATGGCATCGAAG+AGG - tig0022300:58589-58608 Msa1398890:three_prime_UTR 35.0%
! TTTTATTCGCTTAGTACTGC+TGG + tig0022300:58676-58695 None:intergenic 35.0%
!!! TCTCCTTTTGTTGTTCTTCT+CGG + tig0022300:58713-58732 None:intergenic 35.0%
! CATACGGAAATAAAAGGTGT+TGG + tig0022300:58737-58756 None:intergenic 35.0%
GAATATAGTAAGAGGGTGAA+TGG + tig0022300:58918-58937 None:intergenic 35.0%
CTAAAGGGGAATATAGTAAG+AGG + tig0022300:58926-58945 None:intergenic 35.0%
GCATTAAAGAGACATACCTT+GGG + tig0022300:59082-59101 None:intergenic 35.0%
AGCATTAAAGAGACATACCT+TGG + tig0022300:59083-59102 None:intergenic 35.0%
TTTCCAGTCCATTCATTAAG+AGG - tig0022300:59116-59135 Msa1398890:CDS 35.0%
AAACCTCTTAATGAATGGAC+TGG + tig0022300:59122-59141 None:intergenic 35.0%
TAAATGTTGGGAGTAGACAA+GGG + tig0022300:59183-59202 None:intergenic 35.0%
ATAAATGTTGGGAGTAGACA+AGG + tig0022300:59184-59203 None:intergenic 35.0%
CGTTGTTCAGGTAAAAGTAA+AGG - tig0022300:59461-59480 Msa1398890:intron 35.0%
TTATGTCCAACACATTTGGA+AGG - tig0022300:59606-59625 Msa1398890:intron 35.0%
! ACAGAATTTTCACAAAGTCC+AGG - tig0022300:59666-59685 Msa1398890:intron 35.0%
ACATAATTGGATCTTCATGG+AGG + tig0022300:59774-59793 None:intergenic 35.0%
GACACATAATTGGATCTTCA+TGG + tig0022300:59777-59796 None:intergenic 35.0%
CACCATATAGGACACATAAT+TGG + tig0022300:59787-59806 None:intergenic 35.0%
! GTGACTTTGAAAAAGAGGAT+TGG - tig0022300:59804-59823 Msa1398890:intron 35.0%
GGAAAAGAAGAACTGTTGAA+AGG - tig0022300:59869-59888 Msa1398890:intron 35.0%
ATTCAATTGGAGTGTGCATT+CGG - tig0022300:60011-60030 Msa1398890:CDS 35.0%
CTGAAAGGGATACGTAAAAA+TGG - tig0022300:60243-60262 Msa1398890:intron 35.0%
AACAGTTTGTATTCCATGAG+AGG + tig0022300:60289-60308 None:intergenic 35.0%
CTCTCTTAATGAAGCTTCAT+TGG + tig0022300:60337-60356 None:intergenic 35.0%
CAATGAAGCTTCATTAAGAG+AGG - tig0022300:60335-60354 Msa1398890:intron 35.0%
AGAAAATAGGCAAGATTGCA+AGG - tig0022300:60485-60504 Msa1398890:CDS 35.0%
TGCAATTTATAAGGTTGTGG+AGG - tig0022300:60618-60637 Msa1398890:intron 35.0%
ATCTCTAAACCAGCAAGAAA+AGG - tig0022300:60678-60697 Msa1398890:intron 35.0%
! AAACACAAACCTTTTCTTGC+TGG + tig0022300:60690-60709 None:intergenic 35.0%
! ATAATGTTGGTAGATCCCTT+TGG - tig0022300:60722-60741 Msa1398890:CDS 35.0%
TCTGAATATTCACAGCCAAA+GGG + tig0022300:60740-60759 None:intergenic 35.0%
TATTCAGAGTGGACCTTATA+TGG - tig0022300:60752-60771 Msa1398890:CDS 35.0%
GTTGTTGTATCAATTGGCAA+TGG + tig0022300:60925-60944 None:intergenic 35.0%
! CCAAGTGTTGTTGTATCAAT+TGG + tig0022300:60931-60950 None:intergenic 35.0%
CCAATTGATACAACAACACT+TGG - tig0022300:60928-60947 Msa1398890:intron 35.0%
TGATACAACAACACTTGGAT+TGG - tig0022300:60933-60952 Msa1398890:intron 35.0%
TGCAAGACAAAATGTTAGTC+TGG + tig0022300:61250-61269 None:intergenic 35.0%
!! GGTGAAATTTTGTTGTGTCA+TGG - tig0022300:61478-61497 Msa1398890:intron 35.0%
ACAGAAAGGTTTGTCAAGTT+TGG + tig0022300:61571-61590 None:intergenic 35.0%
AAACTTGACAAACCTTTCTG+TGG - tig0022300:61570-61589 Msa1398890:intron 35.0%
TGTGGTATTTCTCTTATGTC+TGG + tig0022300:61825-61844 None:intergenic 35.0%
GAGCTGAAATGTACATTGAT+GGG - tig0022300:61859-61878 Msa1398890:intron 35.0%
AGCTGAAATGTACATTGATG+GGG - tig0022300:61860-61879 Msa1398890:intron 35.0%
! TCACATTTTCCAGTTGTAGA+AGG - tig0022300:61894-61913 Msa1398890:intron 35.0%
ACTGCTTGATATATCCATAG+AGG + tig0022300:62045-62064 None:intergenic 35.0%
GTGATAAATCAAAAGCAGTG+TGG - tig0022300:62063-62082 Msa1398890:intron 35.0%
ATGTGCTTAGTAGTAAGTCT+AGG - tig0022300:62226-62245 Msa1398890:intron 35.0%
ACACTATAATATTGCACAGG+AGG + tig0022300:62350-62369 None:intergenic 35.0%
TAGTCGTAGTTGTGATGACA+AGG - tig0022300:58632-58651 Msa1398890:three_prime_UTR 40.0%
GAACCGAGAAGAACAACAAA+AGG - tig0022300:58707-58726 Msa1398890:three_prime_UTR 40.0%
AAGTAAGGGTTCCAAGCAAA+AGG + tig0022300:58870-58889 None:intergenic 40.0%
! CCTACCAGTTTTCGAAGTAA+GGG + tig0022300:58884-58903 None:intergenic 40.0%
! ACCTACCAGTTTTCGAAGTA+AGG + tig0022300:58885-58904 None:intergenic 40.0%
TGGAGCAAGAAAGGTCTAAA+GGG + tig0022300:58941-58960 None:intergenic 40.0%
ATGGAGCAAGAAAGGTCTAA+AGG + tig0022300:58942-58961 None:intergenic 40.0%
AAGAGACATACCTTGGGTTT+AGG + tig0022300:59076-59095 None:intergenic 40.0%
!! ATGAAGGAGTGTTAGGACAA+TGG - tig0022300:59289-59308 Msa1398890:CDS 40.0%
! ACTTTTACCTGAACAACGGT+TGG + tig0022300:59459-59478 None:intergenic 40.0%
ACGCTTATGTCCAACACATT+TGG - tig0022300:59602-59621 Msa1398890:intron 40.0%
TCACGCAGTTCAATTTGAAG+TGG + tig0022300:59713-59732 None:intergenic 40.0%
! AGTTCTTCTTTTCCCTCTCT+TGG + tig0022300:59863-59882 None:intergenic 40.0%
AGGGAAGAAACGGTCAATTT+CGG - tig0022300:59963-59982 Msa1398890:intron 40.0%
TTCAATTGGAGTGTGCATTC+GGG - tig0022300:60012-60031 Msa1398890:CDS 40.0%
! AGGTAGAAGCGAACCTTTTA+AGG - tig0022300:60036-60055 Msa1398890:CDS 40.0%
CATACCTCATCATTCAACGA+TGG + tig0022300:60219-60238 None:intergenic 40.0%
CATCGTTGAATGATGAGGTA+TGG - tig0022300:60217-60236 Msa1398890:intron 40.0%
TGGTAAACTTGACAAGCAGT+TGG - tig0022300:60263-60282 Msa1398890:intron 40.0%
GCAAGATTGCAAGGAATTCA+TGG - tig0022300:60494-60513 Msa1398890:CDS 40.0%
! GTGGAGGTGACTTTTGATAA+TGG - tig0022300:60634-60653 Msa1398890:intron 40.0%
CTCTGAATATTCACAGCCAA+AGG + tig0022300:60741-60760 None:intergenic 40.0%
TTGGCTGTGAATATTCAGAG+TGG - tig0022300:60741-60760 Msa1398890:CDS 40.0%
! TACAACAACACTTGGATTGG+CGG - tig0022300:60936-60955 Msa1398890:intron 40.0%
TAGAAAGTCAGACTGTTGCA+GGG + tig0022300:61010-61029 None:intergenic 40.0%
!! GACTTTCTAGTTTGTCAGCA+AGG - tig0022300:61021-61040 Msa1398890:CDS 40.0%
!! ATAGGTGTTGAGTCTTGAAG+AGG - tig0022300:61125-61144 Msa1398890:CDS 40.0%
!! TAGGTGTTGAGTCTTGAAGA+GGG - tig0022300:61126-61145 Msa1398890:CDS 40.0%
ATTTCTCTTATGTCTGGCAC+TGG + tig0022300:61819-61838 None:intergenic 40.0%
GGAGCTGAAATGTACATTGA+TGG - tig0022300:61858-61877 Msa1398890:intron 40.0%
GAAATGTACATTGATGGGGA+TGG - tig0022300:61864-61883 Msa1398890:intron 40.0%
TACATTGATGGGGATGGTTA+TGG - tig0022300:61870-61889 Msa1398890:intron 40.0%
! CATTTTCCAGTTGTAGAAGG+TGG - tig0022300:61897-61916 Msa1398890:intron 40.0%
ATCAAAAGCAGTGTGGTGTA+AGG - tig0022300:62070-62089 Msa1398890:intron 40.0%
AGGTTGGGATTGCTATCAAA+TGG - tig0022300:62090-62109 Msa1398890:intron 40.0%
GGTTGGGATTGCTATCAAAT+GGG - tig0022300:62091-62110 Msa1398890:intron 40.0%
! TCATGTTGATATCGATTGCC+AGG - tig0022300:62199-62218 Msa1398890:intron 40.0%
ACTACTAAGCACATTCAACC+TGG + tig0022300:62220-62239 None:intergenic 40.0%
TCTTGGCTGCAATTTGAACA+AGG + tig0022300:62310-62329 None:intergenic 40.0%
GGAACCCTTACTTCGAAAAC+TGG - tig0022300:58877-58896 Msa1398890:CDS 45.0%
CCCTTACTTCGAAAACTGGT+AGG - tig0022300:58881-58900 Msa1398890:CDS 45.0%
GGAGCAAGAAAGGTCTAAAG+GGG + tig0022300:58940-58959 None:intergenic 45.0%
!! ACATGGTGATGGAGCAAGAA+AGG + tig0022300:58950-58969 None:intergenic 45.0%
GTTCCTCAACCAGATACAAG+AGG - tig0022300:59037-59056 Msa1398890:CDS 45.0%
AGACATACCTTGGGTTTAGG+TGG + tig0022300:59073-59092 None:intergenic 45.0%
! TACCTGAACAACGGTTGGTT+GGG + tig0022300:59454-59473 None:intergenic 45.0%
TTACCTGAACAACGGTTGGT+TGG + tig0022300:59455-59474 None:intergenic 45.0%
ACGTCTCCTTCCAAATGTGT+TGG + tig0022300:59615-59634 None:intergenic 45.0%
AAAGTCCAGGATCAAAGCTG+AGG - tig0022300:59679-59698 Msa1398890:intron 45.0%
AAGTCCAGGATCAAAGCTGA+GGG - tig0022300:59680-59699 Msa1398890:intron 45.0%
AAATCAGCAACGCGTAGTCA+TGG - tig0022300:59739-59758 Msa1398890:intron 45.0%
AAAAGAGGATTGGACTGCTG+AGG - tig0022300:59814-59833 Msa1398890:intron 45.0%
TCAAATTGCACCTCCAAGAG+AGG - tig0022300:59847-59866 Msa1398890:intron 45.0%
CAAATTGCACCTCCAAGAGA+GGG - tig0022300:59848-59867 Msa1398890:intron 45.0%
! TCTTCTTTTCCCTCTCTTGG+AGG + tig0022300:59860-59879 None:intergenic 45.0%
AGAAACGGTCAATTTCGGCT+AGG - tig0022300:59968-59987 Msa1398890:intron 45.0%
GAAACGGTCAATTTCGGCTA+GGG - tig0022300:59969-59988 Msa1398890:intron 45.0%
AAACGGTCAATTTCGGCTAG+GGG - tig0022300:59970-59989 Msa1398890:intron 45.0%
!!! AAGCGAACCTTTTAAGGTCC+TGG - tig0022300:60042-60061 Msa1398890:CDS 45.0%
CGAACATCCAGGACCTTAAA+AGG + tig0022300:60052-60071 None:intergenic 45.0%
! TTTAAGGTCCTGGATGTTCG+AGG - tig0022300:60052-60071 Msa1398890:CDS 45.0%
TCGTCCATCGTTGAATGATG+AGG - tig0022300:60212-60231 Msa1398890:intron 45.0%
ATGAGGTATGGCGTCTGAAA+GGG - tig0022300:60229-60248 Msa1398890:intron 45.0%
!! ACAACAACACTTGGATTGGC+GGG - tig0022300:60937-60956 Msa1398890:intron 45.0%
CTAGAAAGTCAGACTGTTGC+AGG + tig0022300:61011-61030 None:intergenic 45.0%
CGGACCAGACAGATAGAATT+AGG + tig0022300:61202-61221 None:intergenic 45.0%
TATGAGGGATGCTATACACC+AGG + tig0022300:61418-61437 None:intergenic 45.0%
GTTTAGTGACTGCCACAGAA+AGG + tig0022300:61585-61604 None:intergenic 45.0%
GCACTGGATCAACATAGATC+TGG + tig0022300:61803-61822 None:intergenic 45.0%
!! GCTCCGACATGATTGTTTTG+TGG + tig0022300:61843-61862 None:intergenic 45.0%
GAATAGCCACCTTCTACAAC+TGG + tig0022300:61906-61925 None:intergenic 45.0%
TGTAGAAGGTGGCTATTCGA+TGG - tig0022300:61908-61927 Msa1398890:intron 45.0%
AAAGCAGTGTGGTGTAAGGT+TGG - tig0022300:62074-62093 Msa1398890:intron 45.0%
AAGCAGTGTGGTGTAAGGTT+GGG - tig0022300:62075-62094 Msa1398890:intron 45.0%
ACTCCATCTTACACGTCTCT+TGG + tig0022300:62327-62346 None:intergenic 45.0%
!! ATTATTATAATTTAATATGA+AGG - tig0022300:59273-59292 Msa1398890:CDS 5.0%
! CGCTTAGTACTGCTGGTTGA+AGG + tig0022300:58669-58688 None:intergenic 50.0%
CAAGCAAAAGGCGAATGCAG+TGG + tig0022300:58858-58877 None:intergenic 50.0%
! CACTGCATTCGCCTTTTGCT+TGG - tig0022300:58856-58875 Msa1398890:exon 50.0%
TCGCCTCTTGTATCTGGTTG+AGG + tig0022300:59043-59062 None:intergenic 50.0%
GGTGAATCGCCTCTTGTATC+TGG + tig0022300:59049-59068 None:intergenic 50.0%
CATACCTTGGGTTTAGGTGG+CGG + tig0022300:59070-59089 None:intergenic 50.0%
GTTGGTTGGGTCAGACAAAC+TGG + tig0022300:59441-59460 None:intergenic 50.0%
CAACGCGTAGTCATGGAAGA+AGG - tig0022300:59746-59765 Msa1398890:intron 50.0%
ATTGGAGTGTGCATTCGGGA+AGG - tig0022300:60016-60035 Msa1398890:CDS 50.0%
GTCCTGGATGTTCGAGGAAA+GGG - tig0022300:60058-60077 Msa1398890:CDS 50.0%
TACCCTTTCCTCGAACATCC+AGG + tig0022300:60063-60082 None:intergenic 50.0%
GATGAGGTATGGCGTCTGAA+AGG - tig0022300:60228-60247 Msa1398890:intron 50.0%
! CTTGTGTCATTGACAGCGCT+TGG - tig0022300:60852-60871 Msa1398890:intron 50.0%
!! CAACAACACTTGGATTGGCG+GGG - tig0022300:60938-60957 Msa1398890:intron 50.0%
GGCTCGCATGTTGCATACAT+AGG + tig0022300:61954-61973 None:intergenic 50.0%
CAGCCAAGAGACGTGTAAGA+TGG - tig0022300:62321-62340 Msa1398890:CDS 50.0%
TTCACCGCCACCTAAACCCA+AGG - tig0022300:59063-59082 Msa1398890:CDS 55.0%
GACCCAACCAACCGTTGTTC+AGG - tig0022300:59449-59468 Msa1398890:intron 55.0%
TCCAGGATCAAAGCTGAGGG+AGG - tig0022300:59683-59702 Msa1398890:intron 55.0%
! ACCTCCCTCAGCTTTGATCC+TGG + tig0022300:59687-59706 None:intergenic 55.0%
GGTCCTGGATGTTCGAGGAA+AGG - tig0022300:60057-60076 Msa1398890:CDS 55.0%
! GACAAGCAGTTGGCCTCTCA+TGG - tig0022300:60273-60292 Msa1398890:intron 55.0%
! GTGTCATTGACAGCGCTTGG+TGG - tig0022300:60855-60874 Msa1398890:intron 55.0%
Chromosome Type Strat End Strand Name
tig0022300 gene 58550 62500 58550 ID=Msa1398890;Name=Msa1398890
tig0022300 mRNA 58550 62500 58550 ID=Msa1398890-mRNA-1;Parent=Msa1398890;Name=Msa1398890-mRNA-1;_AED=0.30;_eAED=0.32;_QI=47|0.28|0.25|1|1|1|8|325|598
tig0022300 exon 58550 59326 58550 ID=Msa1398890-mRNA-1:exon:16898;Parent=Msa1398890-mRNA-1
tig0022300 exon 60008 60182 60008 ID=Msa1398890-mRNA-1:exon:16897;Parent=Msa1398890-mRNA-1
tig0022300 exon 60351 60563 60351 ID=Msa1398890-mRNA-1:exon:16896;Parent=Msa1398890-mRNA-1
tig0022300 exon 60694 60854 60694 ID=Msa1398890-mRNA-1:exon:16895;Parent=Msa1398890-mRNA-1
tig0022300 exon 60971 61458 60971 ID=Msa1398890-mRNA-1:exon:16894;Parent=Msa1398890-mRNA-1
tig0022300 exon 61913 62000 61913 ID=Msa1398890-mRNA-1:exon:16893;Parent=Msa1398890-mRNA-1
tig0022300 exon 62148 62212 62148 ID=Msa1398890-mRNA-1:exon:16892;Parent=Msa1398890-mRNA-1
tig0022300 exon 62299 62500 62299 ID=Msa1398890-mRNA-1:exon:16891;Parent=Msa1398890-mRNA-1
tig0022300 five_prime_UTR 62454 62500 62454 ID=Msa1398890-mRNA-1:five_prime_utr;Parent=Msa1398890-mRNA-1
tig0022300 CDS 62299 62453 62299 ID=Msa1398890-mRNA-1:cds;Parent=Msa1398890-mRNA-1
tig0022300 CDS 62148 62212 62148 ID=Msa1398890-mRNA-1:cds;Parent=Msa1398890-mRNA-1
tig0022300 CDS 61913 62000 61913 ID=Msa1398890-mRNA-1:cds;Parent=Msa1398890-mRNA-1
tig0022300 CDS 60971 61458 60971 ID=Msa1398890-mRNA-1:cds;Parent=Msa1398890-mRNA-1
tig0022300 CDS 60694 60854 60694 ID=Msa1398890-mRNA-1:cds;Parent=Msa1398890-mRNA-1
tig0022300 CDS 60351 60563 60351 ID=Msa1398890-mRNA-1:cds;Parent=Msa1398890-mRNA-1
tig0022300 CDS 60008 60182 60008 ID=Msa1398890-mRNA-1:cds;Parent=Msa1398890-mRNA-1
tig0022300 CDS 58875 59326 58875 ID=Msa1398890-mRNA-1:cds;Parent=Msa1398890-mRNA-1
tig0022300 three_prime_UTR 58550 58874 58550 ID=Msa1398890-mRNA-1:three_prime_utr;Parent=Msa1398890-mRNA-1
Gene Sequence

>Msa1398890

ATGGCATCGAAGAGGACATCTCATAGTGATAGTACTAGTCGTAGTTGTGATGACAAGGATCTTTATGTTCCTTCAACCAGCAGTACTAAGCGAATAAAACAACATCATGGGAACCGAGAAGAACAACAAAAGGAGATCCAACACCTTTTATTTCCCACTATCAGATTCAGTGCCACTGCATTCGCCTTTTGCTTGGAACCCTTACTTCGAAAACTGGTAGATACAAGAGGCGATTCACCGCCACCTAAACCCAAGGTATGTCTCTTTAATGCTTCTTTGTCAAATGTTTCCAGTCCATTCATTAAGAGTTGTGGATTGACGCTTATGTCCAACACATTTGGAAGGAGACGTTTGCAATTGTGTTTCATGAACAAATTGCCAAACAGAATTTTCACAAAGTCCAGGATCAAAGCTGAGGGAGGTGAACCACTTCAAATTGAACTGCGTGATGTTGAAAATCAGCAACGCGTAGTCATGGAAGAAGGTTCCTCCATGAAGATCCAATTATGTGTCCTATATGGTGACTTTGAAAAAGAGGATTGGACTGCTGAGGAATTTAATACTCAAATTGCACCTCCAAGAGAGGGAAAAGAAGAACTGTTGAAAGGAAATGAATTCATTACACTAAGAAATGGAGTTGCTGATATCGACAAAGAGATTGAGTTTACAGATATATCAAAGGGAAGAAACGGTCAATTTCGGCTAGGGGTTAAAATAGTTCAATCAAATTCAATTGGAGTGTGCATTCGGGAAGGTAGAAGCGAACCTTTTAAGGTCCTGGATGTTCGAGGAAAGGATTACGAGAAACACGATCGTCCATCGTTGAATGATGAGGTATGGCGTCTGAAAGGGATACGTAAAAATGGTAAACTTGACAAGCAGTTGGCCTCTCATGGAATACAAACTGTTAAGGATTTTTTAAGATTGTACATAACCAATGAAGCTTCATTAAGAGAGAAAATAGGCAAGATTGCAAGGAATTCATGGAATACAATTGTTGCACATGCTAAAGATTGTGATGTAGACGATGCTGATGAGCGCTACATCTATTACGCAACTGAACAACCAATATCGTTCCTTGTCTTTAATGCAATTTATAAGGTTGTGGAGGTGACTTTTGATAATGGACAAAACGCTCGTTCTATTCAATCTCTAAACCAGCAAGAAAAGCGCTTGGTGGAAAGAGTTAAGCAACGTGCTTACAAACATTTCAATGATCGGAATCCATTGCCAATTGATACAACAACACTTGGATTGGCGGGGACATTGACAAGTGTACAAAATGCACAATATGACGGTCAAGATCAAGCCCTGCAACAGTCTGACTTTCTAGTTTGTCAGCAAGGTCAAAAAGAAATTGGGCAAAGTTATGTTCAACCATGTATCTCTACTTCATATGTTAATGAGGGAATGGATAATTACCAGATCTATGTTGATCCAGTGCCAGACATAAGAGAAATACCACAAAACAATCATGTCGGAGCTGAAATGTACATTGATGGGGATGGTTATGGATCACATTTTCCAGTTGTAGAAGGTGGCTATTCGATGGAGAATCTCATGAATGACTATCCTATGTATGCAACATGCGAGCCAGAAAATTACAACTTATATGGTTTCTCTGATGTAGCTGAGTGTAGCACCCATGTTAATATCCTCAATTCCTCTATGGATATATCAAGCAGTGATAAATCAAAAGCAGTGTGGTGTAAGGTTGGGATTGCTATCAAATGGGTCATATCAATAAGGGTTGCAGCTGCTGCCAAGAAGAATGCAAACTTGTTTTATTTTAACTAA

Protein sequence

>Msa1398890

MASKRTSHSDSTSRSCDDKDLYVPSTSSTKRIKQHHGNREEQQKEIQHLLFPTIRFSATAFAFCLEPLLRKLVDTRGDSPPPKPKVCLFNASLSNVSSPFIKSCGLTLMSNTFGRRRLQLCFMNKLPNRIFTKSRIKAEGGEPLQIELRDVENQQRVVMEEGSSMKIQLCVLYGDFEKEDWTAEEFNTQIAPPREGKEELLKGNEFITLRNGVADIDKEIEFTDISKGRNGQFRLGVKIVQSNSIGVCIREGRSEPFKVLDVRGKDYEKHDRPSLNDEVWRLKGIRKNGKLDKQLASHGIQTVKDFLRLYITNEASLREKIGKIARNSWNTIVAHAKDCDVDDADERYIYYATEQPISFLVFNAIYKVVEVTFDNGQNARSIQSLNQQEKRLVERVKQRAYKHFNDRNPLPIDTTTLGLAGTLTSVQNAQYDGQDQALQQSDFLVCQQGQKEIGQSYVQPCISTSYVNEGMDNYQIYVDPVPDIREIPQNNHVGAEMYIDGDGYGSHFPVVEGGYSMENLMNDYPMYATCEPENYNLYGFSDVAECSTHVNILNSSMDISSSDKSKAVWCKVGIAIKWVISIRVAAAAKKNANLFYFN*