Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1289990 | sp|A0A0B6VQ48|PAR1_ROSHC | 69.592 | 319 | 96 | 1 | 6 | 323 | 4 | 322 | 3.92e-172 | 483 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1289990 | G7LDU4 | 95.666 | 323 | 14 | 0 | 1 | 323 | 11 | 333 | 0.0 | 638 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0014790 | Msa1289990 | 0.819628 | 1.051147e-52 | -8.615850e-47 |
Msa0021980 | Msa1289990 | 0.820861 | 5.484615e-53 | -8.615850e-47 |
Msa0036560 | Msa1289990 | 0.804712 | 1.893986e-49 | -8.615850e-47 |
Msa0047230 | Msa1289990 | 0.834350 | 3.153885e-56 | -8.615850e-47 |
Msa0053960 | Msa1289990 | 0.834055 | 3.738016e-56 | -8.615850e-47 |
Msa0063100 | Msa1289990 | 0.810980 | 8.799404e-51 | -8.615850e-47 |
Msa0063170 | Msa1289990 | 0.833045 | 6.680715e-56 | -8.615850e-47 |
Msa0081840 | Msa1289990 | 0.802433 | 5.624016e-49 | -8.615850e-47 |
Msa0090350 | Msa1289990 | 0.803629 | 3.181749e-49 | -8.615850e-47 |
Msa0117300 | Msa1289990 | 0.840826 | 6.882945e-58 | -8.615850e-47 |
Msa0607620 | Msa1289990 | 0.812183 | 4.819615e-51 | -8.615850e-47 |
Msa0608940 | Msa1289990 | 0.826575 | 2.516593e-54 | -8.615850e-47 |
Msa0618260 | Msa1289990 | 0.803861 | 2.847753e-49 | -8.615850e-47 |
Msa0625440 | Msa1289990 | 0.802222 | 6.215666e-49 | -8.615850e-47 |
Msa0629960 | Msa1289990 | 0.837775 | 4.260069e-57 | -8.615850e-47 |
Msa0639030 | Msa1289990 | 0.805010 | 1.640590e-49 | -8.615850e-47 |
Msa0639880 | Msa1289990 | 0.841257 | 5.302331e-58 | -8.615850e-47 |
Msa0641030 | Msa1289990 | 0.803833 | 2.885886e-49 | -8.615850e-47 |
Msa0647860 | Msa1289990 | 0.803790 | 2.946693e-49 | -8.615850e-47 |
Msa0649530 | Msa1289990 | 0.833522 | 5.081932e-56 | -8.615850e-47 |
Msa0664020 | Msa1289990 | 0.810946 | 8.949076e-51 | -8.615850e-47 |
Msa0674680 | Msa1289990 | 0.806609 | 7.571884e-50 | -8.615850e-47 |
Msa0690580 | Msa1289990 | 0.801923 | 7.161324e-49 | -8.615850e-47 |
Msa0691740 | Msa1289990 | 0.810373 | 1.190472e-50 | -8.615850e-47 |
Msa0697600 | Msa1289990 | 0.811880 | 5.611682e-51 | -8.615850e-47 |
Msa0714200 | Msa1289990 | 0.806742 | 7.095104e-50 | -8.615850e-47 |
Msa0729920 | Msa1289990 | 0.809159 | 2.172090e-50 | -8.615850e-47 |
Msa0733670 | Msa1289990 | -0.827247 | 1.738667e-54 | -8.615850e-47 |
Msa0791120 | Msa1289990 | 0.814973 | 1.172962e-51 | -8.615850e-47 |
Msa0797010 | Msa1289990 | 0.805430 | 1.340263e-49 | -8.615850e-47 |
Msa0835550 | Msa1289990 | 0.813014 | 3.172162e-51 | -8.615850e-47 |
Msa0131090 | Msa1289990 | 0.806466 | 8.115443e-50 | -8.615850e-47 |
Msa0139280 | Msa1289990 | 0.824323 | 8.588018e-54 | -8.615850e-47 |
Msa0143280 | Msa1289990 | 0.831421 | 1.685265e-55 | -8.615850e-47 |
Msa0148430 | Msa1289990 | 0.805764 | 1.140376e-49 | -8.615850e-47 |
Msa0160650 | Msa1289990 | 0.811611 | 6.421378e-51 | -8.615850e-47 |
Msa0164630 | Msa1289990 | 0.804328 | 2.277356e-49 | -8.615850e-47 |
Msa0181410 | Msa1289990 | 0.808828 | 2.556092e-50 | -8.615850e-47 |
Msa0184030 | Msa1289990 | 0.827521 | 1.494146e-54 | -8.615850e-47 |
Msa0184850 | Msa1289990 | 0.804343 | 2.260498e-49 | -8.615850e-47 |
Msa0225370 | Msa1289990 | 0.818628 | 1.775310e-52 | -8.615850e-47 |
Msa1228280 | Msa1289990 | 0.816544 | 5.235611e-52 | -8.615850e-47 |
Msa1228330 | Msa1289990 | 0.817310 | 3.523606e-52 | -8.615850e-47 |
Msa1230190 | Msa1289990 | 0.859886 | 3.031854e-63 | -8.615850e-47 |
Msa1242990 | Msa1289990 | 0.814070 | 1.857773e-51 | -8.615850e-47 |
Msa1247720 | Msa1289990 | 0.804241 | 2.374371e-49 | -8.615850e-47 |
Msa1272770 | Msa1289990 | 0.847947 | 8.374771e-60 | -8.615850e-47 |
Msa1279320 | Msa1289990 | 0.815613 | 8.451290e-52 | -8.615850e-47 |
Msa1286950 | Msa1289990 | 0.821424 | 4.068663e-53 | -8.615850e-47 |
Msa1289990 | Msa1296610 | 0.814864 | 1.240068e-51 | -8.615850e-47 |
Msa1289990 | Msa1304850 | 0.815330 | 9.768772e-52 | -8.615850e-47 |
Msa1289990 | Msa1319230 | 0.824025 | 1.009316e-53 | -8.615850e-47 |
Msa1289990 | Msa1328600 | 0.837167 | 6.098351e-57 | -8.615850e-47 |
Msa1289990 | Msa1331730 | 0.800828 | 1.199900e-48 | -8.615850e-47 |
Msa1289990 | Msa1339310 | 0.818857 | 1.574433e-52 | -8.615850e-47 |
Msa1289990 | Msa1363560 | 0.825226 | 5.259965e-54 | -8.615850e-47 |
Msa1289990 | Msa1368660 | 0.815469 | 9.099699e-52 | -8.615850e-47 |
Msa1289990 | Msa1384980 | 0.821208 | 4.561782e-53 | -8.615850e-47 |
Msa1289990 | Msa1386020 | 0.806622 | 7.521109e-50 | -8.615850e-47 |
Msa1289990 | Msa1386250 | 0.827566 | 1.457683e-54 | -8.615850e-47 |
Msa1289990 | Msa1388270 | 0.809597 | 1.749469e-50 | -8.615850e-47 |
Msa1289990 | Msa1391600 | 0.806742 | 7.096295e-50 | -8.615850e-47 |
Msa1289990 | Msa1395700 | 0.830602 | 2.677729e-55 | -8.615850e-47 |
Msa1289990 | Msa1398310 | 0.803218 | 3.871496e-49 | -8.615850e-47 |
Msa1289990 | Msa1432250 | 0.856909 | 2.337775e-62 | -8.615850e-47 |
Msa1289990 | Msa1433380 | 0.816505 | 5.341248e-52 | -8.615850e-47 |
Msa1289990 | Msa1438780 | 0.806818 | 6.837733e-50 | -8.615850e-47 |
Msa1289990 | Msa1445250 | 0.805567 | 1.254154e-49 | -8.615850e-47 |
Msa1289990 | Msa1450850 | 0.846557 | 2.015831e-59 | -8.615850e-47 |
Msa1289990 | Msa1459630 | 0.835173 | 1.957483e-56 | -8.615850e-47 |
Msa0372990 | Msa1289990 | 0.823914 | 1.071635e-53 | -8.615850e-47 |
Msa0421390 | Msa1289990 | 0.811927 | 5.481016e-51 | -8.615850e-47 |
Msa0431940 | Msa1289990 | 0.817051 | 4.028799e-52 | -8.615850e-47 |
Msa0452010 | Msa1289990 | 0.807439 | 5.052770e-50 | -8.615850e-47 |
Msa0452120 | Msa1289990 | 0.813289 | 2.759638e-51 | -8.615850e-47 |
Msa0452180 | Msa1289990 | 0.838478 | 2.808182e-57 | -8.615850e-47 |
Msa0984830 | Msa1289990 | 0.810209 | 1.291641e-50 | -8.615850e-47 |
Msa0984840 | Msa1289990 | 0.849351 | 3.419183e-60 | -8.615850e-47 |
Msa0984850 | Msa1289990 | 0.805669 | 1.193831e-49 | -8.615850e-47 |
Msa0984860 | Msa1289990 | 0.836837 | 7.405805e-57 | -8.615850e-47 |
Msa0985040 | Msa1289990 | 0.842527 | 2.448481e-58 | -8.615850e-47 |
Msa1031530 | Msa1289990 | 0.806130 | 9.553218e-50 | -8.615850e-47 |
Msa1036360 | Msa1289990 | 0.827660 | 1.383681e-54 | -8.615850e-47 |
Msa1052080 | Msa1289990 | 0.812136 | 4.933785e-51 | -8.615850e-47 |
Msa1076640 | Msa1289990 | 0.828162 | 1.047858e-54 | -8.615850e-47 |
Msa1101300 | Msa1289990 | 0.809871 | 1.527321e-50 | -8.615850e-47 |
Msa0251140 | Msa1289990 | 0.800788 | 1.222992e-48 | -8.615850e-47 |
Msa0265620 | Msa1289990 | 0.810998 | 8.721506e-51 | -8.615850e-47 |
Msa0266380 | Msa1289990 | 0.836486 | 9.098305e-57 | -8.615850e-47 |
Msa0272420 | Msa1289990 | 0.807275 | 5.472785e-50 | -8.615850e-47 |
Msa0312570 | Msa1289990 | 0.807271 | 5.484284e-50 | -8.615850e-47 |
Msa0340530 | Msa1289990 | 0.831999 | 1.213648e-55 | -8.615850e-47 |
Msa0341860 | Msa1289990 | 0.833100 | 6.474160e-56 | -8.615850e-47 |
Msa1113210 | Msa1289990 | 0.811899 | 5.557999e-51 | -8.615850e-47 |
Msa1117830 | Msa1289990 | 0.805420 | 1.346360e-49 | -8.615850e-47 |
Msa1125450 | Msa1289990 | 0.824853 | 6.444296e-54 | -8.615850e-47 |
Msa1128780 | Msa1289990 | 0.803384 | 3.577528e-49 | -8.615850e-47 |
Msa1164570 | Msa1289990 | 0.824455 | 7.997202e-54 | -8.615850e-47 |
Msa1171630 | Msa1289990 | -0.804601 | 1.997549e-49 | -8.615850e-47 |
Msa1182400 | Msa1289990 | 0.835919 | 1.267445e-56 | -8.615850e-47 |
Msa1194680 | Msa1289990 | 0.973494 | 1.597154e-136 | -8.615850e-47 |
Msa1199750 | Msa1289990 | 0.822590 | 2.183836e-53 | -8.615850e-47 |
Msa0484250 | Msa1289990 | 0.803345 | 3.644776e-49 | -8.615850e-47 |
Msa0540160 | Msa1289990 | 0.831269 | 1.836546e-55 | -8.615850e-47 |
Msa0544930 | Msa1289990 | 0.833074 | 6.572529e-56 | -8.615850e-47 |
Msa0555510 | Msa1289990 | 0.835223 | 1.901685e-56 | -8.615850e-47 |
Msa0560370 | Msa1289990 | 0.807543 | 4.800838e-50 | -8.615850e-47 |
Msa0566010 | Msa1289990 | 0.806613 | 7.553654e-50 | -8.615850e-47 |
Msa0586150 | Msa1289990 | 0.813806 | 2.123802e-51 | -8.615850e-47 |
Msa0599250 | Msa1289990 | 0.829455 | 5.097610e-55 | -8.615850e-47 |
Msa0868040 | Msa1289990 | 0.811668 | 6.240463e-51 | -8.615850e-47 |
Msa0883410 | Msa1289990 | 0.815771 | 7.792064e-52 | -8.615850e-47 |
Msa0883660 | Msa1289990 | 0.811570 | 6.554147e-51 | -8.615850e-47 |
Msa0883670 | Msa1289990 | 0.818834 | 1.593929e-52 | -8.615850e-47 |
Msa0887000 | Msa1289990 | 0.806432 | 8.249479e-50 | -8.615850e-47 |
Msa0957820 | Msa1289990 | 0.810723 | 1.000267e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1289990 | MtrunA17_Chr8g0363831 | 95.666 | 323 | 14 | 0 | 1 | 323 | 2 | 324 | 0.0 | 638 |
Msa1289990 | MtrunA17_Chr8g0364051 | 88.854 | 323 | 36 | 0 | 1 | 323 | 1 | 323 | 0.0 | 597 |
Msa1289990 | MtrunA17_Chr3g0077221 | 72.755 | 323 | 87 | 1 | 2 | 323 | 4 | 326 | 8.32e-180 | 499 |
Msa1289990 | MtrunA17_Chr4g0039311 | 72.136 | 323 | 89 | 1 | 2 | 323 | 5 | 327 | 9.69e-178 | 494 |
Msa1289990 | MtrunA17_Chr4g0039321 | 72.136 | 323 | 89 | 1 | 2 | 323 | 3 | 325 | 2.84e-176 | 491 |
Msa1289990 | MtrunA17_Chr3g0077231 | 70.755 | 318 | 92 | 1 | 7 | 323 | 5 | 322 | 2.69e-172 | 480 |
Msa1289990 | MtrunA17_Chr4g0001321 | 47.664 | 321 | 158 | 6 | 1 | 318 | 10 | 323 | 2.90e-89 | 270 |
Msa1289990 | MtrunA17_Chr5g0431311 | 43.302 | 321 | 175 | 5 | 6 | 322 | 3 | 320 | 9.52e-86 | 261 |
Msa1289990 | MtrunA17_Chr2g0333781 | 47.003 | 317 | 158 | 7 | 5 | 318 | 17 | 326 | 3.45e-84 | 257 |
Msa1289990 | MtrunA17_Chr5g0423551 | 43.354 | 316 | 169 | 6 | 9 | 318 | 5 | 316 | 2.57e-83 | 254 |
Msa1289990 | MtrunA17_Chr2g0331211 | 43.175 | 315 | 172 | 4 | 8 | 318 | 5 | 316 | 2.81e-82 | 252 |
Msa1289990 | MtrunA17_Chr3g0106111 | 39.812 | 319 | 187 | 4 | 6 | 321 | 3 | 319 | 4.85e-79 | 243 |
Msa1289990 | MtrunA17_Chr1g0155411 | 41.515 | 330 | 179 | 8 | 1 | 321 | 1 | 325 | 3.09e-78 | 242 |
Msa1289990 | MtrunA17_Chr1g0155431 | 40.120 | 334 | 178 | 7 | 1 | 321 | 1 | 325 | 2.98e-75 | 234 |
Msa1289990 | MtrunA17_Chr4g0002661 | 42.767 | 318 | 169 | 8 | 5 | 317 | 10 | 319 | 5.22e-75 | 233 |
Msa1289990 | MtrunA17_Chr4g0002961 | 41.250 | 320 | 177 | 7 | 6 | 321 | 11 | 323 | 2.62e-69 | 219 |
Msa1289990 | MtrunA17_Chr4g0048961 | 38.671 | 331 | 186 | 7 | 4 | 320 | 10 | 337 | 2.09e-66 | 212 |
Msa1289990 | MtrunA17_Chr2g0291541 | 38.438 | 333 | 188 | 10 | 1 | 322 | 1 | 327 | 9.54e-66 | 210 |
Msa1289990 | MtrunA17_Chr4g0042101 | 40.663 | 332 | 155 | 9 | 9 | 313 | 25 | 341 | 1.26e-64 | 207 |
Msa1289990 | MtrunA17_Chr7g0245741 | 38.037 | 326 | 186 | 9 | 3 | 318 | 4 | 323 | 4.83e-64 | 205 |
Msa1289990 | MtrunA17_Chr7g0245671 | 37.920 | 327 | 188 | 8 | 3 | 318 | 4 | 326 | 1.06e-60 | 197 |
Msa1289990 | MtrunA17_Chr7g0245691 | 38.110 | 328 | 187 | 9 | 3 | 318 | 4 | 327 | 1.20e-59 | 194 |
Msa1289990 | MtrunA17_Chr7g0245731 | 37.117 | 326 | 189 | 9 | 3 | 318 | 54 | 373 | 1.60e-59 | 195 |
Msa1289990 | MtrunA17_Chr7g0245641 | 37.423 | 326 | 189 | 9 | 3 | 317 | 41 | 362 | 2.22e-58 | 192 |
Msa1289990 | MtrunA17_Chr7g0245631 | 37.117 | 326 | 189 | 8 | 3 | 318 | 4 | 323 | 5.99e-58 | 189 |
Msa1289990 | MtrunA17_Chr3g0080551 | 62.931 | 116 | 42 | 1 | 99 | 213 | 13 | 128 | 2.25e-44 | 148 |
Msa1289990 | MtrunA17_Chr4g0010991 | 32.862 | 283 | 177 | 5 | 1 | 274 | 1 | 279 | 7.96e-44 | 153 |
Msa1289990 | MtrunA17_Chr4g0039331 | 45.902 | 183 | 48 | 3 | 91 | 273 | 3 | 134 | 1.23e-43 | 147 |
Msa1289990 | MtrunA17_Chr7g0245711 | 33.922 | 283 | 173 | 7 | 45 | 318 | 8 | 285 | 9.82e-43 | 149 |
Msa1289990 | MtrunA17_Chr5g0411071 | 28.947 | 304 | 191 | 8 | 6 | 301 | 10 | 296 | 4.33e-34 | 126 |
Msa1289990 | MtrunA17_Chr6g0450211 | 27.815 | 302 | 191 | 11 | 7 | 293 | 54 | 343 | 1.58e-29 | 115 |
Msa1289990 | MtrunA17_Chr2g0281991 | 30.479 | 292 | 177 | 7 | 8 | 276 | 8 | 296 | 1.99e-29 | 115 |
Msa1289990 | MtrunA17_Chr7g0275521 | 31.788 | 302 | 172 | 12 | 8 | 282 | 7 | 301 | 3.96e-28 | 111 |
Msa1289990 | MtrunA17_Chr2g0282001 | 31.058 | 293 | 174 | 8 | 8 | 276 | 7 | 295 | 4.74e-28 | 111 |
Msa1289990 | MtrunA17_Chr2g0282011 | 28.374 | 289 | 187 | 5 | 8 | 276 | 8 | 296 | 9.11e-26 | 105 |
Msa1289990 | MtrunA17_Chr1g0202161 | 62.500 | 56 | 21 | 0 | 106 | 161 | 43 | 98 | 2.89e-19 | 83.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1289990 | AT5G19440.1 | 66.563 | 323 | 107 | 1 | 2 | 323 | 4 | 326 | 2.08e-164 | 461 |
Msa1289990 | AT1G51410.1 | 65.635 | 323 | 110 | 1 | 2 | 323 | 3 | 325 | 4.76e-161 | 452 |
Msa1289990 | AT1G09480.2 | 58.621 | 319 | 131 | 1 | 1 | 318 | 1 | 319 | 1.83e-130 | 375 |
Msa1289990 | AT1G09490.1 | 58.934 | 319 | 130 | 1 | 1 | 318 | 1 | 319 | 3.93e-130 | 374 |
Msa1289990 | AT1G09480.1 | 58.621 | 319 | 131 | 1 | 1 | 318 | 48 | 366 | 4.47e-130 | 375 |
Msa1289990 | AT1G09510.1 | 57.764 | 322 | 135 | 1 | 1 | 321 | 1 | 322 | 1.23e-128 | 370 |
Msa1289990 | AT1G66800.1 | 57.367 | 319 | 131 | 2 | 1 | 318 | 1 | 315 | 1.17e-121 | 352 |
Msa1289990 | AT1G09500.1 | 54.462 | 325 | 144 | 4 | 1 | 321 | 1 | 325 | 2.40e-118 | 344 |
Msa1289990 | AT1G09500.3 | 56.115 | 278 | 120 | 2 | 1 | 276 | 1 | 278 | 7.39e-108 | 316 |
Msa1289990 | AT1G09490.2 | 56.884 | 276 | 118 | 1 | 44 | 318 | 13 | 288 | 7.40e-106 | 311 |
Msa1289990 | AT1G09500.2 | 51.568 | 287 | 135 | 4 | 39 | 321 | 5 | 291 | 5.36e-95 | 283 |
Msa1289990 | AT4G35420.1 | 46.178 | 314 | 163 | 3 | 8 | 318 | 8 | 318 | 8.38e-91 | 274 |
Msa1289990 | AT1G15950.3 | 46.688 | 317 | 159 | 7 | 5 | 318 | 10 | 319 | 9.67e-86 | 262 |
Msa1289990 | AT1G15950.1 | 46.688 | 317 | 159 | 7 | 5 | 318 | 10 | 319 | 9.67e-86 | 262 |
Msa1289990 | AT1G80820.1 | 46.226 | 318 | 161 | 7 | 4 | 318 | 4 | 314 | 2.33e-83 | 255 |
Msa1289990 | AT1G15950.2 | 46.326 | 313 | 158 | 7 | 2 | 311 | 7 | 312 | 1.48e-82 | 253 |
Msa1289990 | AT5G58490.1 | 42.154 | 325 | 183 | 4 | 1 | 322 | 2 | 324 | 7.67e-82 | 251 |
Msa1289990 | AT1G68540.1 | 41.562 | 320 | 175 | 7 | 10 | 321 | 6 | 321 | 2.47e-78 | 242 |
Msa1289990 | AT2G02400.1 | 40.566 | 318 | 178 | 7 | 6 | 318 | 4 | 315 | 3.98e-77 | 239 |
Msa1289990 | AT1G15950.6 | 47.292 | 277 | 137 | 6 | 2 | 276 | 7 | 276 | 7.44e-74 | 229 |
Msa1289990 | AT1G15950.4 | 45.085 | 295 | 149 | 7 | 2 | 290 | 7 | 294 | 9.49e-74 | 229 |
Msa1289990 | AT1G15950.5 | 48.148 | 270 | 131 | 6 | 2 | 269 | 7 | 269 | 1.35e-73 | 229 |
Msa1289990 | AT5G42800.1 | 40.061 | 327 | 182 | 7 | 1 | 318 | 1 | 322 | 2.11e-72 | 229 |
Msa1289990 | AT1G80820.2 | 46.909 | 275 | 137 | 6 | 4 | 276 | 4 | 271 | 7.60e-71 | 221 |
Msa1289990 | AT2G33600.1 | 42.500 | 320 | 172 | 7 | 8 | 322 | 9 | 321 | 2.85e-68 | 216 |
Msa1289990 | AT2G33590.1 | 40.000 | 320 | 180 | 7 | 8 | 322 | 9 | 321 | 1.29e-67 | 214 |
Msa1289990 | AT1G25460.1 | 39.185 | 319 | 182 | 8 | 10 | 321 | 6 | 319 | 1.27e-66 | 212 |
Msa1289990 | AT4G27250.2 | 38.235 | 306 | 172 | 6 | 9 | 301 | 14 | 315 | 9.83e-59 | 192 |
Msa1289990 | AT1G61720.1 | 35.758 | 330 | 195 | 6 | 6 | 321 | 11 | 337 | 4.60e-58 | 191 |
Msa1289990 | AT1G76470.1 | 39.873 | 316 | 176 | 7 | 8 | 315 | 7 | 316 | 7.62e-58 | 189 |
Msa1289990 | AT4G27250.1 | 38.291 | 316 | 168 | 8 | 9 | 301 | 14 | 325 | 1.23e-57 | 190 |
Msa1289990 | AT2G45400.1 | 35.714 | 308 | 188 | 3 | 4 | 301 | 36 | 343 | 7.90e-50 | 170 |
Msa1289990 | AT2G45400.2 | 36.786 | 280 | 167 | 3 | 4 | 273 | 36 | 315 | 7.93e-48 | 164 |
Msa1289990 | AT1G15950.7 | 41.256 | 223 | 126 | 4 | 99 | 318 | 1 | 221 | 9.94e-46 | 155 |
Msa1289990 | AT2G45400.4 | 40.183 | 219 | 124 | 2 | 4 | 215 | 36 | 254 | 2.95e-42 | 147 |
Msa1289990 | AT2G23910.3 | 29.617 | 287 | 176 | 9 | 9 | 289 | 11 | 277 | 1.58e-39 | 140 |
Msa1289990 | AT2G23910.2 | 30.651 | 261 | 166 | 7 | 9 | 264 | 11 | 261 | 1.70e-39 | 140 |
Msa1289990 | AT2G23910.1 | 30.651 | 261 | 166 | 7 | 9 | 264 | 11 | 261 | 1.85e-39 | 141 |
Msa1289990 | AT4G30470.1 | 30.418 | 263 | 163 | 6 | 9 | 264 | 11 | 260 | 1.26e-38 | 139 |
Msa1289990 | AT1G68540.2 | 34.101 | 217 | 134 | 5 | 111 | 321 | 1 | 214 | 2.00e-37 | 133 |
Msa1289990 | AT2G45400.3 | 31.227 | 269 | 177 | 2 | 41 | 301 | 18 | 286 | 9.22e-32 | 120 |
Msa1289990 | AT2G23910.4 | 30.137 | 219 | 138 | 7 | 51 | 264 | 19 | 227 | 2.40e-29 | 113 |
Msa1289990 | AT5G14700.1 | 28.169 | 284 | 186 | 8 | 6 | 277 | 53 | 330 | 1.03e-27 | 111 |
Msa1289990 | AT5G14700.2 | 31.818 | 198 | 127 | 4 | 6 | 196 | 53 | 249 | 6.18e-26 | 105 |
Msa1289990 | AT4G33360.2 | 27.273 | 253 | 158 | 7 | 4 | 250 | 11 | 243 | 1.73e-16 | 79.0 |
Msa1289990 | AT4G33360.3 | 27.309 | 249 | 155 | 7 | 8 | 250 | 3 | 231 | 1.95e-16 | 79.3 |
Msa1289990 | AT4G33360.1 | 27.273 | 253 | 158 | 7 | 4 | 250 | 11 | 243 | 2.28e-16 | 79.3 |
Find 105 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTGCATCTTGAAGGATTT+TGG | 0.062090 | 8_3:-44514893 | Msa1289990:three_prime_UTR |
CACCATCCATATGCTTTATT+TGG | 0.080401 | 8_3:+44516127 | None:intergenic |
GGAGAGGTTGCAACTCTTTA+AGG | 0.141949 | 8_3:-44519181 | Msa1289990:CDS |
CTCTTACTCCTTTAAAGTTT+TGG | 0.179143 | 8_3:+44519480 | None:intergenic |
TTTAAAGGAGTAAGAGAAAA+AGG | 0.196981 | 8_3:-44519473 | Msa1289990:five_prime_UTR |
TGGTTAATATTGTTTGAAAA+TGG | 0.220006 | 8_3:-44514952 | Msa1289990:three_prime_UTR |
TCAACCGTGTGAACCGGTTT+TGG | 0.229346 | 8_3:+44520884 | None:intergenic |
CCATTTATTAGGTTTAAAAT+TGG | 0.243613 | 8_3:+44517354 | None:intergenic |
TCCTTAGAAATCTGATACTT+TGG | 0.253725 | 8_3:+44515259 | None:intergenic |
CAGTCTCATACGCCAGAATA+TGG | 0.258064 | 8_3:+44516080 | None:intergenic |
ATCTGATACTTTGGCATATA+CGG | 0.265634 | 8_3:+44515268 | None:intergenic |
TAAGGAAAAGGCTAAGAGTT+TGG | 0.265642 | 8_3:-44515242 | Msa1289990:CDS |
AGCAAGTGGTCAACCTTATT+AGG | 0.265908 | 8_3:+44519222 | None:intergenic |
TGTTGCTAACGCCCATATTC+TGG | 0.300399 | 8_3:-44516092 | Msa1289990:CDS |
AGGTTTGTAAAGTTTATATT+TGG | 0.302921 | 8_3:-44514972 | Msa1289990:three_prime_UTR |
AGGGCAGTCCAAAACTTTAA+AGG | 0.304615 | 8_3:-44519488 | Msa1289990:five_prime_UTR |
GGGGATTCACTTTCACTTCA+TGG | 0.310142 | 8_3:+44515084 | None:intergenic |
TTTGATTCCCTACATAAATC+TGG | 0.326261 | 8_3:+44517839 | None:intergenic |
AATCCCGAGATTGTTGTATA+TGG | 0.341348 | 8_3:-44520922 | Msa1289990:five_prime_UTR |
TTGTCTGAAATTTGTAAAGT+TGG | 0.353800 | 8_3:+44515977 | None:intergenic |
AAGGAAAAGGCTAAGAGTTT+GGG | 0.368159 | 8_3:-44515241 | Msa1289990:CDS |
GACCACTTGCTTAAACTTGA+TGG | 0.374425 | 8_3:-44519210 | Msa1289990:CDS |
GGGAATCGAGTTTACTCCTT+TGG | 0.384776 | 8_3:-44515221 | Msa1289990:CDS |
GTCTCATCAACTATGATTCC+AGG | 0.385079 | 8_3:+44517875 | None:intergenic |
AGCTAGTGGAAGATATTGTT+TGG | 0.390621 | 8_3:-44516053 | Msa1289990:CDS |
GCCAAAGTATCAGATTTCTA+AGG | 0.397714 | 8_3:-44515260 | Msa1289990:CDS |
CTCTTACAACCAGAGCTTAA+CGG | 0.407447 | 8_3:-44517387 | Msa1289990:CDS |
AACGAACAGGTGAAGCAGTA+TGG | 0.409489 | 8_3:+44519100 | None:intergenic |
CCATATGCTTTATTTGGAAA+AGG | 0.409931 | 8_3:+44516133 | None:intergenic |
ACTCTTTAAGGCGGATCTCT+TGG | 0.410511 | 8_3:-44519169 | Msa1289990:CDS |
CTTGGACAAGTGTCATAATC+TGG | 0.413481 | 8_3:-44520833 | Msa1289990:five_prime_UTR |
AAACACCGACAACTAATCTA+AGG | 0.416490 | 8_3:-44520794 | Msa1289990:intron |
TGTCTGAAATTTGTAAAGTT+GGG | 0.417946 | 8_3:+44515978 | None:intergenic |
AGAGGTCCTGCCACCATTGT+TGG | 0.428227 | 8_3:+44517408 | None:intergenic |
CTTGTCATGAATTTATTAAG+TGG | 0.428892 | 8_3:+44515125 | None:intergenic |
GCAAGCAGGTAATCCTAATA+AGG | 0.431032 | 8_3:-44519235 | Msa1289990:intron |
CTGTACCTTAGATTAGTTGT+CGG | 0.432150 | 8_3:+44520789 | None:intergenic |
TTTCAGATCCAGATTTATGT+AGG | 0.435231 | 8_3:-44517847 | Msa1289990:CDS |
AAGTTATTATTGCATCTTGA+AGG | 0.437147 | 8_3:-44514900 | Msa1289990:three_prime_UTR |
TCCTTTGACTATGTTGTTGA+GGG | 0.439038 | 8_3:-44519138 | Msa1289990:CDS |
ACAATCTCGGGATTATGAAA+TGG | 0.443534 | 8_3:+44520931 | None:intergenic |
TTCCTTTGACTATGTTGTTG+AGG | 0.451838 | 8_3:-44519139 | Msa1289990:CDS |
TTTATAAGGTGTGAGGATGA+TGG | 0.453477 | 8_3:-44515292 | Msa1289990:intron |
GTACACACTTTCGAAGACTT+TGG | 0.455183 | 8_3:-44517490 | Msa1289990:CDS |
CTGTCGTCAACCGTGTGAAC+CGG | 0.458923 | 8_3:+44520878 | None:intergenic |
CTTTGGCTGAGGCTGCTGCC+TGG | 0.462996 | 8_3:-44517473 | Msa1289990:CDS |
GTATCAGATTTCTAAGGAAA+AGG | 0.465326 | 8_3:-44515254 | Msa1289990:CDS |
GAGGTCCTGCCACCATTGTT+GGG | 0.466002 | 8_3:+44517409 | None:intergenic |
GAAAATGTTATTGTACTAAG+TGG | 0.470185 | 8_3:+44515062 | None:intergenic |
TCAGGCTGAGTTGATTGATC+CGG | 0.473743 | 8_3:-44518011 | Msa1289990:intron |
CTGCAGTTGTATATGATACA+AGG | 0.475514 | 8_3:-44517907 | Msa1289990:CDS |
CACCATCAAGTTTAAGCAAG+TGG | 0.475735 | 8_3:+44519208 | None:intergenic |
GTGTGTGTGACAGGTGCTGC+TGG | 0.477693 | 8_3:-44519426 | Msa1289990:CDS |
TACCTTCTCGAACCCAAAAC+CGG | 0.483993 | 8_3:-44520897 | Msa1289990:five_prime_UTR |
TCAACACTTCCGTTAAGCTC+TGG | 0.486325 | 8_3:+44517378 | None:intergenic |
GGAAAAGTGGTGTGTGTGAC+AGG | 0.486873 | 8_3:-44519435 | Msa1289990:CDS |
AAAATGTTATTGTACTAAGT+GGG | 0.489408 | 8_3:+44515063 | None:intergenic |
AAGGCGGATCTCTTGGAAGA+AGG | 0.495574 | 8_3:-44519162 | Msa1289990:CDS |
TATGAGTGGGGAAGGAAAAG+TGG | 0.501831 | 8_3:-44519448 | Msa1289990:CDS |
GTTGATTGATCCGGCACTGA+AGG | 0.508391 | 8_3:-44518002 | Msa1289990:CDS |
TTATAAGGTGTGAGGATGAT+GGG | 0.510282 | 8_3:-44515291 | Msa1289990:intron |
AGTCTCATACGCCAGAATAT+GGG | 0.517552 | 8_3:+44516081 | None:intergenic |
TACTCCATATACAACAATCT+CGG | 0.521949 | 8_3:+44520918 | None:intergenic |
ACTCCATATACAACAATCTC+GGG | 0.529643 | 8_3:+44520919 | None:intergenic |
CACGGTTGACGACAGGAGGA+TGG | 0.531109 | 8_3:-44520870 | Msa1289990:five_prime_UTR |
TCATTTACGACAAAACGAAC+AGG | 0.531722 | 8_3:+44519087 | None:intergenic |
TATGAGACTGCTTCAGCTAG+TGG | 0.532203 | 8_3:-44516067 | Msa1289990:CDS |
ATGGGTGGTAAGTCAAAGCT+TGG | 0.538336 | 8_3:-44520851 | Msa1289990:five_prime_UTR |
TTAAGAGTTCCCTTCAGTGC+CGG | 0.539925 | 8_3:+44517992 | None:intergenic |
TCCTTGAGGCTGACTTCCAA+AGG | 0.541588 | 8_3:+44515205 | None:intergenic |
TTCAGATCCAGATTTATGTA+GGG | 0.546056 | 8_3:-44517846 | Msa1289990:CDS |
CGGTTCACACGGTTGACGAC+AGG | 0.547256 | 8_3:-44520877 | Msa1289990:five_prime_UTR |
AGATTTATGTAGGGAATCAA+AGG | 0.549744 | 8_3:-44517837 | Msa1289990:intron |
AAAAGGATTATGAGTGGGGA+AGG | 0.549887 | 8_3:-44519456 | Msa1289990:exon |
TTCCAAATAAAGCATATGGA+TGG | 0.552811 | 8_3:-44516129 | Msa1289990:CDS |
AAGATAACTCGTTTCACAGA+TGG | 0.555240 | 8_3:+44517944 | None:intergenic |
ACTTTCGAAGACTTTGGCTG+AGG | 0.557625 | 8_3:-44517484 | Msa1289990:CDS |
TGACAGTGTAACCACGTTGG+AGG | 0.560969 | 8_3:+44519373 | None:intergenic |
AAATGTTATTGTACTAAGTG+GGG | 0.573815 | 8_3:+44515064 | None:intergenic |
TCCTTTGGAAGTCAGCCTCA+AGG | 0.576984 | 8_3:-44515206 | Msa1289990:CDS |
CAAGTAGTCGTAGAAGCTCA+AGG | 0.580283 | 8_3:-44519508 | Msa1289990:five_prime_UTR |
GCTTAAACTTGATGGTGCAA+AGG | 0.582641 | 8_3:-44519202 | Msa1289990:CDS |
ATTAACCCAACAATGGTGGC+AGG | 0.586153 | 8_3:-44517414 | Msa1289990:CDS |
ACCCTCAACAACATAGTCAA+AGG | 0.587229 | 8_3:+44519137 | None:intergenic |
ACGGTTGACGACAGGAGGAT+GGG | 0.588903 | 8_3:-44520869 | Msa1289990:five_prime_UTR |
TTAAGCTCTGGTTGTAAGAG+AGG | 0.589725 | 8_3:+44517390 | None:intergenic |
ATATTGTTTGGCTGAGAGAG+TGG | 0.592698 | 8_3:-44516041 | Msa1289990:CDS |
TTGATTGATCCGGCACTGAA+GGG | 0.592808 | 8_3:-44518001 | Msa1289990:CDS |
AACTTGATGGTGCAAAGGAG+AGG | 0.594203 | 8_3:-44519197 | Msa1289990:CDS |
TGCTATTAACCCAACAATGG+TGG | 0.600626 | 8_3:-44517418 | Msa1289990:CDS |
AATGTTATTGTACTAAGTGG+GGG | 0.602107 | 8_3:+44515065 | None:intergenic |
AGCTTTCCACAGTCTCCTTG+AGG | 0.603990 | 8_3:+44515191 | None:intergenic |
AAGTAGTCGTAGAAGCTCAA+GGG | 0.613557 | 8_3:-44519507 | Msa1289990:five_prime_UTR |
GAATCATAGTTGATGAGACA+TGG | 0.618543 | 8_3:-44517871 | Msa1289990:CDS |
TATGTTGTTGAGGGTTGTGA+CGG | 0.623069 | 8_3:-44519129 | Msa1289990:CDS |
GAACCCAAAACCGGTTCACA+CGG | 0.628771 | 8_3:-44520888 | Msa1289990:five_prime_UTR |
TTCACACGGTTGACGACAGG+AGG | 0.638830 | 8_3:-44520874 | Msa1289990:five_prime_UTR |
CTAACTTGGGTCACGAACAG+TGG | 0.644352 | 8_3:+44519347 | None:intergenic |
GAGGTTGCAACTCTTTAAGG+CGG | 0.649841 | 8_3:-44519178 | Msa1289990:CDS |
AAATGAAAACAGCATTGACA+TGG | 0.650659 | 8_3:-44517442 | Msa1289990:CDS |
AGTCAGCCTCAAGGAGACTG+TGG | 0.656563 | 8_3:-44515197 | Msa1289990:CDS |
CTCTGACAGTGTAACCACGT+TGG | 0.665690 | 8_3:+44519370 | None:intergenic |
GGTTGCTATTAACCCAACAA+TGG | 0.678942 | 8_3:-44517421 | Msa1289990:CDS |
GTTGACGACAGGAGGATGGG+TGG | 0.686646 | 8_3:-44520866 | Msa1289990:five_prime_UTR |
GTTAAGTTTCTCCTCCAACG+TGG | 0.706690 | 8_3:-44519384 | Msa1289990:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTATTATCAAACAAAA+TGG | + | chr8_3:44516144-44516163 | None:intergenic | 10.0% |
!!! | ACTCTTTATAAAAATATTTT+GGG | - | chr8_3:44517041-44517060 | Msa1289990:intron | 10.0% |
!! | TCATAATATATAATGAAATA+TGG | - | chr8_3:44518298-44518317 | Msa1289990:intron | 10.0% |
!! | ACAAAATAGATAAAAATATT+TGG | + | chr8_3:44519468-44519487 | None:intergenic | 10.0% |
!!! | AATTTTAGTTTATTTTAGTT+AGG | - | chr8_3:44520170-44520189 | Msa1289990:intron | 10.0% |
!!! | TATTATAAACTTTTTGAATA+AGG | - | chr8_3:44520943-44520962 | Msa1289990:five_prime_UTR | 10.0% |
!!! | AGTTTGATTTTTTCTTATAA+AGG | - | chr8_3:44514937-44514956 | Msa1289990:three_prime_UTR | 15.0% |
!!! | TCATAATTGCTATTTTTATT+AGG | - | chr8_3:44515487-44515506 | Msa1289990:intron | 15.0% |
!! | TTTATAGTTCAAAAATATGA+TGG | - | chr8_3:44515707-44515726 | Msa1289990:intron | 15.0% |
!! | ATATATATAAGTAGGTTTAA+TGG | - | chr8_3:44515894-44515913 | Msa1289990:intron | 15.0% |
!!! | TAAAAGTTTCATTTTCTTTT+TGG | - | chr8_3:44516321-44516340 | Msa1289990:intron | 15.0% |
!!! | TTTTTAATGACATAGTTTAT+AGG | - | chr8_3:44516390-44516409 | Msa1289990:intron | 15.0% |
!!! | TTTTAATGACATAGTTTATA+GGG | - | chr8_3:44516391-44516410 | Msa1289990:intron | 15.0% |
!!! | CACTCTTTATAAAAATATTT+TGG | - | chr8_3:44517040-44517059 | Msa1289990:intron | 15.0% |
!!! | GTAAAATGTAAATGAAATTT+TGG | - | chr8_3:44517259-44517278 | Msa1289990:intron | 15.0% |
!!! | GTAAAATAATAATACAGTTT+TGG | - | chr8_3:44517483-44517502 | Msa1289990:CDS | 15.0% |
!! | AAGTAATATAATATATTGGA+TGG | - | chr8_3:44517606-44517625 | Msa1289990:intron | 15.0% |
!! | AAATTAAGAACTAAGAAAAT+TGG | - | chr8_3:44517712-44517731 | Msa1289990:intron | 15.0% |
!! | AATTAAGAACTAAGAAAATT+GGG | - | chr8_3:44517713-44517732 | Msa1289990:intron | 15.0% |
!!! | TTTCATTTTGAATAACTTTT+AGG | + | chr8_3:44518138-44518157 | None:intergenic | 15.0% |
!! | AAAAGATTCCTAATTAAATA+AGG | - | chr8_3:44518268-44518287 | Msa1289990:intron | 15.0% |
!! | AAGAAAAATTACCATTTATT+AGG | + | chr8_3:44518595-44518614 | None:intergenic | 15.0% |
!!! | ATAAATGGTAATTTTTCTTT+AGG | - | chr8_3:44518596-44518615 | Msa1289990:intron | 15.0% |
!! | ATTGATATTAGATAAGATTT+AGG | - | chr8_3:44519488-44519507 | Msa1289990:five_prime_UTR | 15.0% |
!! | AATGCATATAAAATATGAAT+TGG | - | chr8_3:44520008-44520027 | Msa1289990:intron | 15.0% |
!! | ATGCATATAAAATATGAATT+GGG | - | chr8_3:44520009-44520028 | Msa1289990:intron | 15.0% |
!!! | ATAGTAAATATTTTCACAAA+AGG | - | chr8_3:44520102-44520121 | Msa1289990:intron | 15.0% |
!! | AAATGAAATACTAGAAGATA+AGG | + | chr8_3:44515308-44515327 | None:intergenic | 20.0% |
!! | AAAACTAGAAAATCGAAAAT+TGG | + | chr8_3:44515340-44515359 | None:intergenic | 20.0% |
!! | AACATTAATTAAGCAAACAA+AGG | + | chr8_3:44515392-44515411 | None:intergenic | 20.0% |
!!! | TGTTCTAAATGAAGTTTTTA+AGG | - | chr8_3:44515599-44515618 | Msa1289990:intron | 20.0% |
!!! | GTTCTAAATGAAGTTTTTAA+GGG | - | chr8_3:44515600-44515619 | Msa1289990:intron | 20.0% |
!!! | ATTTTAAAATTCGACAGTTT+TGG | + | chr8_3:44515738-44515757 | None:intergenic | 20.0% |
!!! | AAACTGTCGAATTTTAAAAT+AGG | - | chr8_3:44515738-44515757 | Msa1289990:intron | 20.0% |
!!! | AACTGTCGAATTTTAAAATA+GGG | - | chr8_3:44515739-44515758 | Msa1289990:intron | 20.0% |
!!! | TTTGTGAATTGTTTTTTAGA+AGG | - | chr8_3:44515921-44515940 | Msa1289990:intron | 20.0% |
!! | AACTATTATAGAAACAGAAA+CGG | + | chr8_3:44516101-44516120 | None:intergenic | 20.0% |
!! | TTTGGTATTAGATTAGATTA+AGG | - | chr8_3:44516339-44516358 | Msa1289990:intron | 20.0% |
!! | CGTGAAGTAATATAATATAT+TGG | - | chr8_3:44517602-44517621 | Msa1289990:intron | 20.0% |
!! | ATTAAGAACTAAGAAAATTG+GGG | - | chr8_3:44517714-44517733 | Msa1289990:intron | 20.0% |
!!! | ACTTTTGATTTCTTTATTTC+AGG | - | chr8_3:44517906-44517925 | Msa1289990:CDS | 20.0% |
!!! | ATCTTTTGTAATATCATTCA+AGG | + | chr8_3:44518255-44518274 | None:intergenic | 20.0% |
!!! | ACTTGTTTCCTTATTTAATT+AGG | + | chr8_3:44518279-44518298 | None:intergenic | 20.0% |
!!! | TCTATTTGTGTTATTAGTTA+TGG | - | chr8_3:44518423-44518442 | Msa1289990:intron | 20.0% |
!!! | CCATTTATTAGGTTTAAAAT+TGG | + | chr8_3:44518584-44518603 | None:intergenic | 20.0% |
!!! | CCAATTTTAAACCTAATAAA+TGG | - | chr8_3:44518581-44518600 | Msa1289990:intron | 20.0% |
!!! | AAAAAGCTTATATTAGTTTG+TGG | - | chr8_3:44518659-44518678 | Msa1289990:intron | 20.0% |
!! | ATCATTAACAAAATCACAAA+GGG | + | chr8_3:44518859-44518878 | None:intergenic | 20.0% |
!! | TATCATTAACAAAATCACAA+AGG | + | chr8_3:44518860-44518879 | None:intergenic | 20.0% |
!! | AATTTAAAAGAAACTCAAAG+AGG | - | chr8_3:44519113-44519132 | Msa1289990:CDS | 20.0% |
!! | AAAGTTTAATAAACTGCTAA+CGG | - | chr8_3:44519230-44519249 | Msa1289990:CDS | 20.0% |
!! | ATAACATTTATAGTGATTGT+TGG | - | chr8_3:44519562-44519581 | Msa1289990:intron | 20.0% |
!! | GACATATTAAAGACAAATAT+TGG | + | chr8_3:44519624-44519643 | None:intergenic | 20.0% |
!! | CTTTGATTAATCAATAATAG+TGG | - | chr8_3:44519677-44519696 | Msa1289990:intron | 20.0% |
!!! | ATAACAACTTTTTGAATTGT+TGG | - | chr8_3:44519768-44519787 | Msa1289990:intron | 20.0% |
!!! | CATGTTATTTTACAAACTTA+AGG | + | chr8_3:44520129-44520148 | None:intergenic | 20.0% |
!! | CTTAAGTTTGTAAAATAACA+TGG | - | chr8_3:44520127-44520146 | Msa1289990:intron | 20.0% |
!! | TATATTATAGAAATTCAGCA+CGG | - | chr8_3:44520207-44520226 | Msa1289990:intron | 20.0% |
!!! | TCTAATTTGTGTTTTTTGTA+TGG | + | chr8_3:44520444-44520463 | None:intergenic | 20.0% |
!! | AAAAAATTAACTTCTTTGCA+CGG | + | chr8_3:44520587-44520606 | None:intergenic | 20.0% |
!! | AAAATGTTATTGTACTAAGT+GGG | + | chr8_3:44520875-44520894 | None:intergenic | 20.0% |
!! | AGGTTTGTAAAGTTTATATT+TGG | - | chr8_3:44520963-44520982 | Msa1289990:five_prime_UTR | 20.0% |
!! | TGGTTAATATTGTTTGAAAA+TGG | - | chr8_3:44520983-44521002 | Msa1289990:five_prime_UTR | 20.0% |
! | CAAGTAACTAACAAACTATA+TGG | + | chr8_3:44515220-44515239 | None:intergenic | 25.0% |
! | TTGACAAAATATGTGATAGA+AGG | + | chr8_3:44515561-44515580 | None:intergenic | 25.0% |
!! | TAGTTCAAAAATATGATGGA+TGG | - | chr8_3:44515711-44515730 | Msa1289990:intron | 25.0% |
!!! | ACTGTCGAATTTTAAAATAG+GGG | - | chr8_3:44515740-44515759 | Msa1289990:intron | 25.0% |
!! | TTTTCACTTTATTGCAGAAT+TGG | + | chr8_3:44515768-44515787 | None:intergenic | 25.0% |
! | TTCTGCAATAAAGTGAAAAT+AGG | - | chr8_3:44515769-44515788 | Msa1289990:intron | 25.0% |
! | TCTGCAATAAAGTGAAAATA+GGG | - | chr8_3:44515770-44515789 | Msa1289990:intron | 25.0% |
!!! | AATTGTTTTTTAGAAGGCTT+TGG | - | chr8_3:44515927-44515946 | Msa1289990:intron | 25.0% |
! | AGATTCATTTACCTTTCTAA+TGG | + | chr8_3:44516052-44516071 | None:intergenic | 25.0% |
!!! | AATGAAACTTTTACTGATTC+TGG | + | chr8_3:44516314-44516333 | None:intergenic | 25.0% |
! | ACTATGTCATTAAAAAATGC+AGG | + | chr8_3:44516386-44516405 | None:intergenic | 25.0% |
! | TTTAAAGGAGTAAGAGAAAA+AGG | - | chr8_3:44516462-44516481 | Msa1289990:intron | 25.0% |
!! | TGTGCTGATGAATTTATATA+AGG | + | chr8_3:44516625-44516644 | None:intergenic | 25.0% |
! | TTGTGTATAAATCGTTCAAT+TGG | - | chr8_3:44516893-44516912 | Msa1289990:intron | 25.0% |
!!! | TTGTTATTAGGTTTTATACC+CGG | - | chr8_3:44516921-44516940 | Msa1289990:intron | 25.0% |
! | TGAAAATCAATTAACGTTGA+AGG | + | chr8_3:44517183-44517202 | None:intergenic | 25.0% |
! | ATGGACATTTGCTTAATAAT+TGG | - | chr8_3:44517393-44517412 | Msa1289990:CDS | 25.0% |
!!! | TTTTGAAATGATGAAAGACA+CGG | + | chr8_3:44517453-44517472 | None:intergenic | 25.0% |
!!! | ACCAATTTTAGAGTTTTGAA+TGG | - | chr8_3:44517528-44517547 | Msa1289990:intron | 25.0% |
!!! | CCAATTTTAGAGTTTTGAAT+GGG | - | chr8_3:44517529-44517548 | Msa1289990:intron | 25.0% |
! | ATACACAAAAACACATGAAA+TGG | - | chr8_3:44517685-44517704 | Msa1289990:intron | 25.0% |
!! | GTTTTCATTTACAAATTTCC+AGG | + | chr8_3:44518483-44518502 | None:intergenic | 25.0% |
!! | AATGGTAATTTTTCTTTAGG+AGG | - | chr8_3:44518599-44518618 | Msa1289990:intron | 25.0% |
! | TCTCAACAAGATAATAACTT+AGG | - | chr8_3:44518800-44518819 | Msa1289990:intron | 25.0% |
! | TCATTAACAAAATCACAAAG+GGG | + | chr8_3:44518858-44518877 | None:intergenic | 25.0% |
!!! | TAAATTTTGTTTCATTTCCC+TGG | + | chr8_3:44519099-44519118 | None:intergenic | 25.0% |
!!! | CGTTTTAAAAATCACTTAAC+TGG | + | chr8_3:44519259-44519278 | None:intergenic | 25.0% |
!!! | GTTAAGTGATTTTTAAAACG+TGG | - | chr8_3:44519259-44519278 | Msa1289990:intron | 25.0% |
! | ATAAAATTGTACACATGTTG+AGG | + | chr8_3:44519398-44519417 | None:intergenic | 25.0% |
! | TTCATTGTTACAACTATTGA+AGG | - | chr8_3:44519536-44519555 | Msa1289990:intron | 25.0% |
! | GTCTTTAATATGTCATTGAA+TGG | - | chr8_3:44519630-44519649 | Msa1289990:intron | 25.0% |
! | AAGTTGTTATATTATGCAAG+AGG | + | chr8_3:44519758-44519777 | None:intergenic | 25.0% |
!! | TGTCTGAAATTTGTAAAGTT+GGG | + | chr8_3:44519960-44519979 | None:intergenic | 25.0% |
!! | TTGTCTGAAATTTGTAAAGT+TGG | + | chr8_3:44519961-44519980 | None:intergenic | 25.0% |
!! | ATTTTATATGCATTCTTGAG+AGG | + | chr8_3:44520002-44520021 | None:intergenic | 25.0% |
! | TATAATATAAACCAACTGCT+AGG | + | chr8_3:44520196-44520215 | None:intergenic | 25.0% |
!!! | CATCTCTTAATTTGTTCTTT+GGG | + | chr8_3:44520359-44520378 | None:intergenic | 25.0% |
!!! | TCATCTCTTAATTTGTTCTT+TGG | + | chr8_3:44520360-44520379 | None:intergenic | 25.0% |
!! | ACACAAATTAGATTTTTGCT+CGG | - | chr8_3:44520452-44520471 | Msa1289990:intron | 25.0% |
! | AAAAATTAACTTCTTTGCAC+GGG | + | chr8_3:44520586-44520605 | None:intergenic | 25.0% |
!! | GCAATCTCTACAATTTTATA+AGG | - | chr8_3:44520629-44520648 | Msa1289990:intron | 25.0% |
! | CTTGTCATGAATTTATTAAG+TGG | + | chr8_3:44520813-44520832 | None:intergenic | 25.0% |
! | AAATGTTATTGTACTAAGTG+GGG | + | chr8_3:44520874-44520893 | None:intergenic | 25.0% |
! | GAAAATGTTATTGTACTAAG+TGG | + | chr8_3:44520876-44520895 | None:intergenic | 25.0% |
!!! | ATAACTTGTTCCTAGATTTT+TGG | + | chr8_3:44521022-44521041 | None:intergenic | 25.0% |
! | AAGTTATTATTGCATCTTGA+AGG | - | chr8_3:44521035-44521054 | Msa1289990:five_prime_UTR | 25.0% |
TACTCCATATACAACAATCT+CGG | + | chr8_3:44515020-44515039 | None:intergenic | 30.0% | |
! | ATTAGGTTTAACTGCACTTT+TGG | - | chr8_3:44515504-44515523 | Msa1289990:intron | 30.0% |
!!! | AACCGTCGAATTTTAAAACA+GGG | + | chr8_3:44515533-44515552 | None:intergenic | 30.0% |
!!! | AAACCGTCGAATTTTAAAAC+AGG | + | chr8_3:44515534-44515553 | None:intergenic | 30.0% |
!!! | GTTTTAAAATTCGACGGTTT+TGG | - | chr8_3:44515534-44515553 | Msa1289990:intron | 30.0% |
!!! | CTGTCGAATTTTAAAATAGG+GGG | - | chr8_3:44515741-44515760 | Msa1289990:intron | 30.0% |
CTGCAATAAAGTGAAAATAG+GGG | - | chr8_3:44515771-44515790 | Msa1289990:intron | 30.0% | |
TGCAATAAAGTGAAAATAGG+GGG | - | chr8_3:44515772-44515791 | Msa1289990:intron | 30.0% | |
TATAGAAACAGAAACGGAAA+AGG | + | chr8_3:44516095-44516114 | None:intergenic | 30.0% | |
! | CAGGACAATGTATTACATTT+TGG | + | chr8_3:44516274-44516293 | None:intergenic | 30.0% |
!!! | CTCTTACTCCTTTAAAGTTT+TGG | + | chr8_3:44516458-44516477 | None:intergenic | 30.0% |
AAGAGAAAAAGGATTATGAG+TGG | - | chr8_3:44516473-44516492 | Msa1289990:intron | 30.0% | |
AGAGAAAAAGGATTATGAGT+GGG | - | chr8_3:44516474-44516493 | Msa1289990:intron | 30.0% | |
TCCTTTATGTTTCAGCTATT+TGG | - | chr8_3:44516654-44516673 | Msa1289990:intron | 30.0% | |
ACCAAATAGCTGAAACATAA+AGG | + | chr8_3:44516658-44516677 | None:intergenic | 30.0% | |
ACGATTTATACACAATAGCA+TGG | + | chr8_3:44516888-44516907 | None:intergenic | 30.0% | |
!!! | CCTTACAAATTGGTTTTGTA+AGG | + | chr8_3:44517004-44517023 | None:intergenic | 30.0% |
CCTTACAAAACCAATTTGTA+AGG | - | chr8_3:44517001-44517020 | Msa1289990:intron | 30.0% | |
AAAACCAATTTGTAAGGTGA+GGG | - | chr8_3:44517007-44517026 | Msa1289990:intron | 30.0% | |
AACTCAAGTTACACATTGAA+AGG | + | chr8_3:44517075-44517094 | None:intergenic | 30.0% | |
AACATGTGTTTGTGTATGAA+AGG | + | chr8_3:44517239-44517258 | None:intergenic | 30.0% | |
TAATTATGCTCTTGAGTCTT+GGG | + | chr8_3:44517317-44517336 | None:intergenic | 30.0% | |
ATAATTATGCTCTTGAGTCT+TGG | + | chr8_3:44517318-44517337 | None:intergenic | 30.0% | |
! | AGACTCAAGAGCATAATTAT+CGG | - | chr8_3:44517318-44517337 | Msa1289990:intron | 30.0% |
!! | CCCATTCAAAACTCTAAAAT+TGG | + | chr8_3:44517532-44517551 | None:intergenic | 30.0% |
TCCATTTATACTACCAAGTT+GGG | - | chr8_3:44517629-44517648 | Msa1289990:intron | 30.0% | |
!! | CATGTGTTTTTGTGTATGAA+AGG | + | chr8_3:44517682-44517701 | None:intergenic | 30.0% |
! | ACTATGATTCCAGGATTTTT+CGG | + | chr8_3:44518054-44518073 | None:intergenic | 30.0% |
TTTCAGATCCAGATTTATGT+AGG | - | chr8_3:44518088-44518107 | Msa1289990:intron | 30.0% | |
TTCAGATCCAGATTTATGTA+GGG | - | chr8_3:44518089-44518108 | Msa1289990:intron | 30.0% | |
TTTGATTCCCTACATAAATC+TGG | + | chr8_3:44518099-44518118 | None:intergenic | 30.0% | |
AGATTTATGTAGGGAATCAA+AGG | - | chr8_3:44518098-44518117 | Msa1289990:intron | 30.0% | |
! | TGGGACATGTTATTTAAATG+TGG | - | chr8_3:44518176-44518195 | Msa1289990:intron | 30.0% |
! | AATGTGGTTTATCTGAAGTT+AGG | - | chr8_3:44518192-44518211 | Msa1289990:intron | 30.0% |
GAAATATGGAACTAATCCAA+AGG | - | chr8_3:44518312-44518331 | Msa1289990:intron | 30.0% | |
AGTAACATAAGTTGTTCCTT+TGG | + | chr8_3:44518331-44518350 | None:intergenic | 30.0% | |
ATAGAAGTAGTCAAGAAAGT+TGG | + | chr8_3:44518408-44518427 | None:intergenic | 30.0% | |
!! | AAATGAAAACAGCATTGACA+TGG | - | chr8_3:44518493-44518512 | Msa1289990:intron | 30.0% |
!!! | ATTTTTCTTTAGGAGGCATT+TGG | - | chr8_3:44518606-44518625 | Msa1289990:intron | 30.0% |
! | TTTTCTTTATGCTACACTTC+TGG | - | chr8_3:44518824-44518843 | Msa1289990:intron | 30.0% |
GATTGTGTTTGAATACGAAA+GGG | + | chr8_3:44519073-44519092 | None:intergenic | 30.0% | |
AGATTGTGTTTGAATACGAA+AGG | + | chr8_3:44519074-44519093 | None:intergenic | 30.0% | |
!!! | ATTTTTAAAACGTGGTGTCT+TGG | - | chr8_3:44519267-44519286 | Msa1289990:intron | 30.0% |
!! | CCATATGCTTTATTTGGAAA+AGG | + | chr8_3:44519805-44519824 | None:intergenic | 30.0% |
! | CCTTTTCCAAATAAAGCATA+TGG | - | chr8_3:44519802-44519821 | Msa1289990:intron | 30.0% |
TTCCAAATAAAGCATATGGA+TGG | - | chr8_3:44519806-44519825 | Msa1289990:intron | 30.0% | |
TTCCACATAAGCTAGAAATA+TGG | - | chr8_3:44520277-44520296 | Msa1289990:intron | 30.0% | |
GAATTGTCTAAGCTCTATTT+AGG | + | chr8_3:44520303-44520322 | None:intergenic | 30.0% | |
AAGAGATGAATGAAACTTGT+TGG | - | chr8_3:44520371-44520390 | Msa1289990:intron | 30.0% | |
! | TTTTGTATGGTCCAAGTAAA+GGG | + | chr8_3:44520431-44520450 | None:intergenic | 30.0% |
! | TTTTTGTATGGTCCAAGTAA+AGG | + | chr8_3:44520432-44520451 | None:intergenic | 30.0% |
! | CTACAATTTTATAAGGTGTG+AGG | - | chr8_3:44520636-44520655 | Msa1289990:intron | 30.0% |
ATCTGATACTTTGGCATATA+CGG | + | chr8_3:44520670-44520689 | None:intergenic | 30.0% | |
TCCTTAGAAATCTGATACTT+TGG | + | chr8_3:44520679-44520698 | None:intergenic | 30.0% | |
! | GTATCAGATTTCTAAGGAAA+AGG | - | chr8_3:44520681-44520700 | Msa1289990:intron | 30.0% |
AATGTTATTGTACTAAGTGG+GGG | + | chr8_3:44520873-44520892 | None:intergenic | 30.0% | |
TACTTTGAGTCCAAAAATCT+AGG | - | chr8_3:44521009-44521028 | Msa1289990:five_prime_UTR | 30.0% | |
ACAATCTCGGGATTATGAAA+TGG | + | chr8_3:44515007-44515026 | None:intergenic | 35.0% | |
AATCCCGAGATTGTTGTATA+TGG | - | chr8_3:44515013-44515032 | Msa1289990:three_prime_UTR | 35.0% | |
ACTCCATATACAACAATCTC+GGG | + | chr8_3:44515019-44515038 | None:intergenic | 35.0% | |
AAACACCGACAACTAATCTA+AGG | - | chr8_3:44515141-44515160 | Msa1289990:three_prime_UTR | 35.0% | |
! | CTGTACCTTAGATTAGTTGT+CGG | + | chr8_3:44515149-44515168 | None:intergenic | 35.0% |
!!! | ACCGTCGAATTTTAAAACAG+GGG | + | chr8_3:44515532-44515551 | None:intergenic | 35.0% |
!!! | TGTTTTTTAGAAGGCTTTGG+AGG | - | chr8_3:44515930-44515949 | Msa1289990:intron | 35.0% |
!!! | GTTTTTTAGAAGGCTTTGGA+GGG | - | chr8_3:44515931-44515950 | Msa1289990:intron | 35.0% |
ACCTAAGTGTTCCATTAGAA+AGG | - | chr8_3:44516038-44516057 | Msa1289990:CDS | 35.0% | |
ACCTTTCTAATGGAACACTT+AGG | + | chr8_3:44516042-44516061 | None:intergenic | 35.0% | |
GTTTATATCCACCAGTGTAT+GGG | + | chr8_3:44516203-44516222 | None:intergenic | 35.0% | |
AGTTTATATCCACCAGTGTA+TGG | + | chr8_3:44516204-44516223 | None:intergenic | 35.0% | |
GAGAAAAAGGATTATGAGTG+GGG | - | chr8_3:44516475-44516494 | Msa1289990:intron | 35.0% | |
TGGTTTCCCTTATGAATGAT+TGG | - | chr8_3:44516674-44516693 | Msa1289990:intron | 35.0% | |
TGCACACCAATCATTCATAA+GGG | + | chr8_3:44516683-44516702 | None:intergenic | 35.0% | |
TTGCACACCAATCATTCATA+AGG | + | chr8_3:44516684-44516703 | None:intergenic | 35.0% | |
TTCCTTTGACTATGTTGTTG+AGG | - | chr8_3:44516796-44516815 | Msa1289990:intron | 35.0% | |
TCCTTTGACTATGTTGTTGA+GGG | - | chr8_3:44516797-44516816 | Msa1289990:intron | 35.0% | |
TCATTTACGACAAAACGAAC+AGG | + | chr8_3:44516851-44516870 | None:intergenic | 35.0% | |
!! | CAATTGGTGTGCTTGTTATT+AGG | - | chr8_3:44516909-44516928 | Msa1289990:intron | 35.0% |
TCAGAGTCTAAGAATAAGCT+AGG | + | chr8_3:44516947-44516966 | None:intergenic | 35.0% | |
CAAAACCAATTTGTAAGGTG+AGG | - | chr8_3:44517006-44517025 | Msa1289990:intron | 35.0% | |
! | GGTAAAGTGATTTTCATACC+AGG | - | chr8_3:44517280-44517299 | Msa1289990:intron | 35.0% |
! | TGATTTTCATACCAGGTTAG+CGG | - | chr8_3:44517287-44517306 | Msa1289990:intron | 35.0% |
! | TCAAGAGCATAATTATCGGT+GGG | - | chr8_3:44517322-44517341 | Msa1289990:intron | 35.0% |
!! | TGCAAATTTTAGTCCATGTG+TGG | - | chr8_3:44517351-44517370 | Msa1289990:intron | 35.0% |
!!! | AGAGTTTTGAATGGGTTGTA+TGG | - | chr8_3:44517537-44517556 | Msa1289990:intron | 35.0% |
GTCCATTTATACTACCAAGT+TGG | - | chr8_3:44517628-44517647 | Msa1289990:intron | 35.0% | |
! | ACCCAACTTGGTAGTATAAA+TGG | + | chr8_3:44517633-44517652 | None:intergenic | 35.0% |
! | ATTTATACTACCAAGTTGGG+TGG | - | chr8_3:44517632-44517651 | Msa1289990:intron | 35.0% |
! | AGAATTCGTCTTTTTCTGTC+AGG | - | chr8_3:44517820-44517839 | Msa1289990:intron | 35.0% |
GGAACTTCAATTTGAAAGTG+TGG | + | chr8_3:44517870-44517889 | None:intergenic | 35.0% | |
AAAGTTAATAGCGCATAGAG+TGG | + | chr8_3:44517891-44517910 | None:intergenic | 35.0% | |
AAGATAACTCGTTTCACAGA+TGG | + | chr8_3:44517994-44518013 | None:intergenic | 35.0% | |
CTGCAGTTGTATATGATACA+AGG | - | chr8_3:44518028-44518047 | Msa1289990:intron | 35.0% | |
!! | GAATCATAGTTGATGAGACA+TGG | - | chr8_3:44518064-44518083 | Msa1289990:intron | 35.0% |
AAACTTGAAGCTCTTGAAGT+TGG | - | chr8_3:44518156-44518175 | Msa1289990:intron | 35.0% | |
AACTTGAAGCTCTTGAAGTT+GGG | - | chr8_3:44518157-44518176 | Msa1289990:intron | 35.0% | |
TCCAACATAACTTTGCTGAA+GGG | + | chr8_3:44518753-44518772 | None:intergenic | 35.0% | |
TTCCAACATAACTTTGCTGA+AGG | + | chr8_3:44518754-44518773 | None:intergenic | 35.0% | |
! | TGCAATTAGTTTGAACCGTT+TGG | - | chr8_3:44519024-44519043 | Msa1289990:intron | 35.0% |
!!! | ATTTTTCGAGTGATGCCAAA+CGG | + | chr8_3:44519042-44519061 | None:intergenic | 35.0% |
GGCATCACTCGAAAAATTAA+TGG | - | chr8_3:44519045-44519064 | Msa1289990:intron | 35.0% | |
TATTCAAACACAATCTCTCC+AGG | - | chr8_3:44519078-44519097 | Msa1289990:intron | 35.0% | |
ATTCAAACACAATCTCTCCA+GGG | - | chr8_3:44519079-44519098 | Msa1289990:intron | 35.0% | |
TTCTCTTATGAGGAATGCTA+AGG | + | chr8_3:44519339-44519358 | None:intergenic | 35.0% | |
CATTCCTCATAAGAGAATGA+GGG | - | chr8_3:44519342-44519361 | Msa1289990:intron | 35.0% | |
GATTATGACTGATAGCAAGA+GGG | + | chr8_3:44519599-44519618 | None:intergenic | 35.0% | |
AGATTATGACTGATAGCAAG+AGG | + | chr8_3:44519600-44519619 | None:intergenic | 35.0% | |
! | CTTTTTGAATTGTTGGATGC+AGG | - | chr8_3:44519775-44519794 | Msa1289990:intron | 35.0% |
! | CACCATCCATATGCTTTATT+TGG | + | chr8_3:44519811-44519830 | None:intergenic | 35.0% |
AGCTAGTGGAAGATATTGTT+TGG | - | chr8_3:44519882-44519901 | Msa1289990:intron | 35.0% | |
! | TGCTTCTTGTTTGAAACACT+CGG | - | chr8_3:44520072-44520091 | Msa1289990:intron | 35.0% |
GAACAAGATTTAGTTGTCTG+TGG | - | chr8_3:44520393-44520412 | Msa1289990:intron | 35.0% | |
TCAGTTTACTCTATCTCACA+AGG | - | chr8_3:44520487-44520506 | Msa1289990:intron | 35.0% | |
CAGTTTACTCTATCTCACAA+GGG | - | chr8_3:44520488-44520507 | Msa1289990:intron | 35.0% | |
CTATCTCACAAGGGTTATAA+AGG | - | chr8_3:44520497-44520516 | Msa1289990:intron | 35.0% | |
TTTATAAGGTGTGAGGATGA+TGG | - | chr8_3:44520643-44520662 | Msa1289990:intron | 35.0% | |
TTATAAGGTGTGAGGATGAT+GGG | - | chr8_3:44520644-44520663 | Msa1289990:intron | 35.0% | |
! | GCCAAAGTATCAGATTTCTA+AGG | - | chr8_3:44520675-44520694 | Msa1289990:intron | 35.0% |
TAAGGAAAAGGCTAAGAGTT+TGG | - | chr8_3:44520693-44520712 | Msa1289990:intron | 35.0% | |
AAGGAAAAGGCTAAGAGTTT+GGG | - | chr8_3:44520694-44520713 | Msa1289990:intron | 35.0% | |
CTTGGACAAGTGTCATAATC+TGG | - | chr8_3:44515102-44515121 | Msa1289990:three_prime_UTR | 40.0% | |
!!! | CCGTCGAATTTTAAAACAGG+GGG | + | chr8_3:44515531-44515550 | None:intergenic | 40.0% |
!!! | CCCCCTGTTTTAAAATTCGA+CGG | - | chr8_3:44515528-44515547 | Msa1289990:intron | 40.0% |
! | ACACTTAGGTTGTGTTTGGA+GGG | + | chr8_3:44516028-44516047 | None:intergenic | 40.0% |
! | AACACTTAGGTTGTGTTTGG+AGG | + | chr8_3:44516029-44516048 | None:intergenic | 40.0% |
! | TGGAACACTTAGGTTGTGTT+TGG | + | chr8_3:44516032-44516051 | None:intergenic | 40.0% |
! | AAACGGAAAAGGAGTATAGG+TGG | + | chr8_3:44516084-44516103 | None:intergenic | 40.0% |
! | CAGAAACGGAAAAGGAGTAT+AGG | + | chr8_3:44516087-44516106 | None:intergenic | 40.0% |
GGTAGCATACTATACTTCAC+AGG | + | chr8_3:44516293-44516312 | None:intergenic | 40.0% | |
AAGTAGTCGTAGAAGCTCAA+GGG | - | chr8_3:44516428-44516447 | Msa1289990:intron | 40.0% | |
AGGGCAGTCCAAAACTTTAA+AGG | - | chr8_3:44516447-44516466 | Msa1289990:intron | 40.0% | |
AAAAGGATTATGAGTGGGGA+AGG | - | chr8_3:44516479-44516498 | Msa1289990:intron | 40.0% | |
!!! | CTGCTGGTTTTATTGCTTCA+TGG | - | chr8_3:44516525-44516544 | Msa1289990:intron | 40.0% |
!! | GGAGAAAGAAGCACTAACTT+GGG | + | chr8_3:44516604-44516623 | None:intergenic | 40.0% |
!! | AGGAGAAAGAAGCACTAACT+TGG | + | chr8_3:44516605-44516624 | None:intergenic | 40.0% |
GCAAGCAGGTAATCCTAATA+AGG | - | chr8_3:44516700-44516719 | Msa1289990:intron | 40.0% | |
AGCAAGTGGTCAACCTTATT+AGG | + | chr8_3:44516716-44516735 | None:intergenic | 40.0% | |
GACCACTTGCTTAAACTTGA+TGG | - | chr8_3:44516725-44516744 | Msa1289990:intron | 40.0% | |
CACCATCAAGTTTAAGCAAG+TGG | + | chr8_3:44516730-44516749 | None:intergenic | 40.0% | |
!! | GCTTAAACTTGATGGTGCAA+AGG | - | chr8_3:44516733-44516752 | Msa1289990:intron | 40.0% |
ACCCTCAACAACATAGTCAA+AGG | + | chr8_3:44516801-44516820 | None:intergenic | 40.0% | |
TATGTTGTTGAGGGTTGTGA+CGG | - | chr8_3:44516806-44516825 | Msa1289990:intron | 40.0% | |
! | TTTTGTCGTAAATGACCCAC+AGG | - | chr8_3:44516856-44516875 | Msa1289990:intron | 40.0% |
ATAGCATGGAATGAACCTGT+GGG | + | chr8_3:44516874-44516893 | None:intergenic | 40.0% | |
AATAGCATGGAATGAACCTG+TGG | + | chr8_3:44516875-44516894 | None:intergenic | 40.0% | |
AGTCTAAGAATAAGCTAGGC+CGG | + | chr8_3:44516943-44516962 | None:intergenic | 40.0% | |
AATTTGTAAGGTGAGGGTGA+GGG | - | chr8_3:44517013-44517032 | Msa1289990:intron | 40.0% | |
! | CTCAAGAGCATAATTATCGG+TGG | - | chr8_3:44517321-44517340 | Msa1289990:intron | 40.0% |
!! | TTGGTAGCTTTTCTTGACCA+CGG | - | chr8_3:44517412-44517431 | Msa1289990:CDS | 40.0% |
TTAAGCAGACACAGATGAAC+TGG | + | chr8_3:44517752-44517771 | None:intergenic | 40.0% | |
CGAATTCTCACAGAAATAGC+TGG | + | chr8_3:44517808-44517827 | None:intergenic | 40.0% | |
GTCTCATCAACTATGATTCC+AGG | + | chr8_3:44518063-44518082 | None:intergenic | 40.0% | |
GTACACACTTTCGAAGACTT+TGG | - | chr8_3:44518445-44518464 | Msa1289990:intron | 40.0% | |
! | GGTTGCTATTAACCCAACAA+TGG | - | chr8_3:44518514-44518533 | Msa1289990:intron | 40.0% |
TGCTATTAACCCAACAATGG+TGG | - | chr8_3:44518517-44518536 | Msa1289990:intron | 40.0% | |
! | TTAAGCTCTGGTTGTAAGAG+AGG | + | chr8_3:44518548-44518567 | None:intergenic | 40.0% |
CTCTTACAACCAGAGCTTAA+CGG | - | chr8_3:44518548-44518567 | Msa1289990:intron | 40.0% | |
AATCATCCTCGAGCAATTGA+AGG | - | chr8_3:44519000-44519019 | Msa1289990:intron | 40.0% | |
!! | GAAACTCAAAGAGGTGTTGA+TGG | - | chr8_3:44519122-44519141 | Msa1289990:CDS | 40.0% |
GGTACGAAGAAGTTCATTGA+CGG | - | chr8_3:44519152-44519171 | Msa1289990:CDS | 40.0% | |
GCATTCCTCATAAGAGAATG+AGG | - | chr8_3:44519341-44519360 | Msa1289990:intron | 40.0% | |
TATGCCCTCATTCTCTTATG+AGG | + | chr8_3:44519349-44519368 | None:intergenic | 40.0% | |
ATACTCTTGTAGTCTCAGTC+AGG | + | chr8_3:44519443-44519462 | None:intergenic | 40.0% | |
AGTCTCATACGCCAGAATAT+GGG | + | chr8_3:44519857-44519876 | None:intergenic | 40.0% | |
ATATTGTTTGGCTGAGAGAG+TGG | - | chr8_3:44519894-44519913 | Msa1289990:intron | 40.0% | |
!! | TTTTAGTTAGGCCTAGCAGT+TGG | - | chr8_3:44520182-44520201 | Msa1289990:intron | 40.0% |
!! | GGCCATATTTCTAGCTTATG+TGG | + | chr8_3:44520282-44520301 | None:intergenic | 40.0% |
ACAATTCTCTCCCTACAAAC+TGG | - | chr8_3:44520316-44520335 | Msa1289990:intron | 40.0% | |
!!! | TCCCTACAAACTGGTTTTCT+GGG | - | chr8_3:44520325-44520344 | Msa1289990:intron | 40.0% |
TCCCAGAAAACCAGTTTGTA+GGG | + | chr8_3:44520329-44520348 | None:intergenic | 40.0% | |
ATCCCAGAAAACCAGTTTGT+AGG | + | chr8_3:44520330-44520349 | None:intergenic | 40.0% | |
!!! | AACTGGTTTTCTGGGATTGT+AGG | - | chr8_3:44520333-44520352 | Msa1289990:intron | 40.0% |
TGTTTGTGCTTCCCTTTACT+TGG | - | chr8_3:44520417-44520436 | Msa1289990:intron | 40.0% | |
TATAAAGGCTTCTGTCCTCA+TGG | - | chr8_3:44520512-44520531 | Msa1289990:intron | 40.0% | |
ATAAAGGCTTCTGTCCTCAT+GGG | - | chr8_3:44520513-44520532 | Msa1289990:intron | 40.0% | |
TACCTTCTCGAACCCAAAAC+CGG | - | chr8_3:44515038-44515057 | Msa1289990:three_prime_UTR | 45.0% | |
ATGGGTGGTAAGTCAAAGCT+TGG | - | chr8_3:44515084-44515103 | Msa1289990:three_prime_UTR | 45.0% | |
CAAGTAGTCGTAGAAGCTCA+AGG | - | chr8_3:44516427-44516446 | Msa1289990:intron | 45.0% | |
TATGAGTGGGGAAGGAAAAG+TGG | - | chr8_3:44516487-44516506 | Msa1289990:intron | 45.0% | |
GTTAAGTTTCTCCTCCAACG+TGG | - | chr8_3:44516551-44516570 | Msa1289990:intron | 45.0% | |
TGAATGATTGGTGTGCAAGC+AGG | - | chr8_3:44516686-44516705 | Msa1289990:intron | 45.0% | |
!! | AACTTGATGGTGCAAAGGAG+AGG | - | chr8_3:44516738-44516757 | Msa1289990:intron | 45.0% |
GGAGAGGTTGCAACTCTTTA+AGG | - | chr8_3:44516754-44516773 | Msa1289990:intron | 45.0% | |
! | GAGGTTGCAACTCTTTAAGG+CGG | - | chr8_3:44516757-44516776 | Msa1289990:intron | 45.0% |
!! | ACTCTTTAAGGCGGATCTCT+TGG | - | chr8_3:44516766-44516785 | Msa1289990:intron | 45.0% |
AACGAACAGGTGAAGCAGTA+TGG | + | chr8_3:44516838-44516857 | None:intergenic | 45.0% | |
GTCTAAGAATAAGCTAGGCC+GGG | + | chr8_3:44516942-44516961 | None:intergenic | 45.0% | |
CTCACCCTCACCTTACAAAT+TGG | + | chr8_3:44517014-44517033 | None:intergenic | 45.0% | |
CAATTTGTAAGGTGAGGGTG+AGG | - | chr8_3:44517012-44517031 | Msa1289990:intron | 45.0% | |
AGAGCATAATTATCGGTGGG+TGG | - | chr8_3:44517325-44517344 | Msa1289990:intron | 45.0% | |
AAAGACACGGTTGCTGAAGT+TGG | + | chr8_3:44517440-44517459 | None:intergenic | 45.0% | |
AAGTTGGGTGGCATGAATGT+GGG | - | chr8_3:44517644-44517663 | Msa1289990:intron | 45.0% | |
!! | TCAGGCTGAGTTGATTGATC+CGG | - | chr8_3:44517924-44517943 | Msa1289990:CDS | 45.0% |
! | TTGATTGATCCGGCACTGAA+GGG | - | chr8_3:44517934-44517953 | Msa1289990:CDS | 45.0% |
TTAAGAGTTCCCTTCAGTGC+CGG | + | chr8_3:44517946-44517965 | None:intergenic | 45.0% | |
GATACAAGGCCGAAAAATCC+TGG | - | chr8_3:44518042-44518061 | Msa1289990:intron | 45.0% | |
ACTTTCGAAGACTTTGGCTG+AGG | - | chr8_3:44518451-44518470 | Msa1289990:intron | 45.0% | |
ATTAACCCAACAATGGTGGC+AGG | - | chr8_3:44518521-44518540 | Msa1289990:intron | 45.0% | |
TCAACACTTCCGTTAAGCTC+TGG | + | chr8_3:44518560-44518579 | None:intergenic | 45.0% | |
! | CTTTGCTGAAGGGCATGTTA+AGG | + | chr8_3:44518743-44518762 | None:intergenic | 45.0% |
GCCCTTCAGCAAAGTTATGT+TGG | - | chr8_3:44518749-44518768 | Msa1289990:intron | 45.0% | |
TTGCAACCTTCAATTGCTCG+AGG | + | chr8_3:44519009-44519028 | None:intergenic | 45.0% | |
!! | ACTCAAAGAGGTGTTGATGG+TGG | - | chr8_3:44519125-44519144 | Msa1289990:CDS | 45.0% |
!! | CTCAAAGAGGTGTTGATGGT+GGG | - | chr8_3:44519126-44519145 | Msa1289990:CDS | 45.0% |
ACGAAGAAGTTCATTGACGG+TGG | - | chr8_3:44519155-44519174 | Msa1289990:CDS | 45.0% | |
CGAAGAAGTTCATTGACGGT+GGG | - | chr8_3:44519156-44519175 | Msa1289990:CDS | 45.0% | |
GAAGAAGTTCATTGACGGTG+GGG | - | chr8_3:44519157-44519176 | Msa1289990:CDS | 45.0% | |
AAGAAGTTCATTGACGGTGG+GGG | - | chr8_3:44519158-44519177 | Msa1289990:CDS | 45.0% | |
TGTCTTGGACCAATGGTTGA+GGG | - | chr8_3:44519282-44519301 | Msa1289990:intron | 45.0% | |
TTGAACACTCCCTCAACCAT+TGG | + | chr8_3:44519294-44519313 | None:intergenic | 45.0% | |
!! | ATGGTTGAGGGAGTGTTCAA+AGG | - | chr8_3:44519294-44519313 | Msa1289990:intron | 45.0% |
GCAAGAGGACAATTCTTGTC+TGG | + | chr8_3:44519743-44519762 | None:intergenic | 45.0% | |
TGTTGCTAACGCCCATATTC+TGG | - | chr8_3:44519843-44519862 | Msa1289990:intron | 45.0% | |
CAGTCTCATACGCCAGAATA+TGG | + | chr8_3:44519858-44519877 | None:intergenic | 45.0% | |
TATGAGACTGCTTCAGCTAG+TGG | - | chr8_3:44519868-44519887 | Msa1289990:intron | 45.0% | |
!!! | CTCCCTACAAACTGGTTTTC+TGG | - | chr8_3:44520324-44520343 | Msa1289990:intron | 45.0% |
GAGATGAACAACTTCCCATG+AGG | + | chr8_3:44520530-44520549 | None:intergenic | 45.0% | |
GGGAATCGAGTTTACTCCTT+TGG | - | chr8_3:44520714-44520733 | Msa1289990:intron | 45.0% | |
GGGGATTCACTTTCACTTCA+TGG | + | chr8_3:44520854-44520873 | None:intergenic | 45.0% | |
!!! | TATTTTGTATTTTTTATTTT+TGG | - | chr8_3:44515273-44515292 | Msa1289990:CDS | 5.0% |
!!! | TTTTATTTTTTATTAATAAG+TGG | + | chr8_3:44515425-44515444 | None:intergenic | 5.0% |
!! | ATATATGAATAATAATAAAA+AGG | + | chr8_3:44515816-44515835 | None:intergenic | 5.0% |
!! | ATATATATATATATATAAGT+AGG | - | chr8_3:44515886-44515905 | Msa1289990:intron | 5.0% |
!!! | AACCGGTTTTGGGTTCGAGA+AGG | + | chr8_3:44515043-44515062 | None:intergenic | 50.0% |
! | GAACCCAAAACCGGTTCACA+CGG | - | chr8_3:44515047-44515066 | Msa1289990:three_prime_UTR | 50.0% |
!! | CAACCGTGTGAACCGGTTTT+GGG | + | chr8_3:44515053-44515072 | None:intergenic | 50.0% |
!! | TCAACCGTGTGAACCGGTTT+TGG | + | chr8_3:44515054-44515073 | None:intergenic | 50.0% |
AACCTATGCAGCCCATACAC+TGG | - | chr8_3:44516189-44516208 | Msa1289990:intron | 50.0% | |
GGAAAAGTGGTGTGTGTGAC+AGG | - | chr8_3:44516500-44516519 | Msa1289990:intron | 50.0% | |
TGACAGTGTAACCACGTTGG+AGG | + | chr8_3:44516565-44516584 | None:intergenic | 50.0% | |
CTCTGACAGTGTAACCACGT+TGG | + | chr8_3:44516568-44516587 | None:intergenic | 50.0% | |
CTAACTTGGGTCACGAACAG+TGG | + | chr8_3:44516591-44516610 | None:intergenic | 50.0% | |
AAGGCGGATCTCTTGGAAGA+AGG | - | chr8_3:44516773-44516792 | Msa1289990:intron | 50.0% | |
CACATTCATGCCACCCAACT+TGG | + | chr8_3:44517645-44517664 | None:intergenic | 50.0% | |
! | CAAGTTGGGTGGCATGAATG+TGG | - | chr8_3:44517643-44517662 | Msa1289990:intron | 50.0% |
AGTTGGGTGGCATGAATGTG+GGG | - | chr8_3:44517645-44517664 | Msa1289990:intron | 50.0% | |
! | GTTGATTGATCCGGCACTGA+AGG | - | chr8_3:44517933-44517952 | Msa1289990:CDS | 50.0% |
!! | AAGAGGTGTTGATGGTGGGT+TGG | - | chr8_3:44519130-44519149 | Msa1289990:CDS | 50.0% |
!! | AGAGGTGTTGATGGTGGGTT+GGG | - | chr8_3:44519131-44519150 | Msa1289990:CDS | 50.0% |
AGAAGTTCATTGACGGTGGG+GGG | - | chr8_3:44519159-44519178 | Msa1289990:CDS | 50.0% | |
AACGTGGTGTCTTGGACCAA+TGG | - | chr8_3:44519275-44519294 | Msa1289990:intron | 50.0% | |
GTGTCTTGGACCAATGGTTG+AGG | - | chr8_3:44519281-44519300 | Msa1289990:intron | 50.0% | |
TAGTCTCAGTCAGGCATGAC+AGG | + | chr8_3:44519434-44519453 | None:intergenic | 50.0% | |
! | TCCTTTGGAAGTCAGCCTCA+AGG | - | chr8_3:44520729-44520748 | Msa1289990:intron | 50.0% |
! | TCCTTGAGGCTGACTTCCAA+AGG | + | chr8_3:44520733-44520752 | None:intergenic | 50.0% |
AGCTTTCCACAGTCTCCTTG+AGG | + | chr8_3:44520747-44520766 | None:intergenic | 50.0% | |
CTGTCGTCAACCGTGTGAAC+CGG | + | chr8_3:44515060-44515079 | None:intergenic | 55.0% | |
TTCACACGGTTGACGACAGG+AGG | - | chr8_3:44515061-44515080 | Msa1289990:three_prime_UTR | 55.0% | |
ACGGTTGACGACAGGAGGAT+GGG | - | chr8_3:44515066-44515085 | Msa1289990:three_prime_UTR | 55.0% | |
! | CACCAGTGTATGGGCTGCAT+AGG | + | chr8_3:44516194-44516213 | None:intergenic | 55.0% |
CTATGCAGCCCATACACTGG+TGG | - | chr8_3:44516192-44516211 | Msa1289990:intron | 55.0% | |
TCTTGGGATCTCCGCTAACC+TGG | + | chr8_3:44517301-44517320 | None:intergenic | 55.0% | |
CTGACAGCAGTTGCCACACA+TGG | + | chr8_3:44517367-44517386 | None:intergenic | 55.0% | |
TGTGGCAACTGCTGTCAGAG+AGG | - | chr8_3:44517369-44517388 | Msa1289990:CDS | 55.0% | |
GTGGCAACTGCTGTCAGAGA+GGG | - | chr8_3:44517370-44517389 | Msa1289990:CDS | 55.0% | |
CAACTGCTGTCAGAGAGGGA+TGG | - | chr8_3:44517374-44517393 | Msa1289990:CDS | 55.0% | |
GGTTGCTGAAGTTGGAACCG+TGG | + | chr8_3:44517432-44517451 | None:intergenic | 55.0% | |
GAGGTCCTGCCACCATTGTT+GGG | + | chr8_3:44518529-44518548 | None:intergenic | 55.0% | |
AGAGGTCCTGCCACCATTGT+TGG | + | chr8_3:44518530-44518549 | None:intergenic | 55.0% | |
GAAGTTCATTGACGGTGGGG+GGG | - | chr8_3:44519160-44519179 | Msa1289990:CDS | 55.0% | |
AGTCAGCCTCAAGGAGACTG+TGG | - | chr8_3:44520738-44520757 | Msa1289990:intron | 55.0% | |
CGGTTCACACGGTTGACGAC+AGG | - | chr8_3:44515058-44515077 | Msa1289990:three_prime_UTR | 60.0% | |
CACGGTTGACGACAGGAGGA+TGG | - | chr8_3:44515065-44515084 | Msa1289990:three_prime_UTR | 60.0% | |
GTTGACGACAGGAGGATGGG+TGG | - | chr8_3:44515069-44515088 | Msa1289990:three_prime_UTR | 60.0% | |
! | GTGTGTGTGACAGGTGCTGC+TGG | - | chr8_3:44516509-44516528 | Msa1289990:intron | 60.0% |
TTCATTGACGGTGGGGGGGT+GGG | - | chr8_3:44519164-44519183 | Msa1289990:CDS | 60.0% | |
CTTTGGCTGAGGCTGCTGCC+TGG | - | chr8_3:44518462-44518481 | Msa1289990:intron | 65.0% | |
GTTCATTGACGGTGGGGGGG+TGG | - | chr8_3:44519163-44519182 | Msa1289990:CDS | 65.0% | |
ATTGACGGTGGGGGGGTGGG+TGG | - | chr8_3:44519167-44519186 | Msa1289990:CDS | 70.0% | |
CGGTGGGGGGGTGGGTGGAA+AGG | - | chr8_3:44519172-44519191 | Msa1289990:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 44514893 | 44521064 | 44514893 | ID=Msa1289990;Name=Msa1289990 |
chr8_3 | mRNA | 44514893 | 44521064 | 44514893 | ID=Msa1289990-mRNA-1;Parent=Msa1289990;Name=Msa1289990-mRNA-1;_AED=0.13;_eAED=0.13;_QI=353|1|1|1|0.83|0.71|7|269|323 |
chr8_3 | exon | 44514893 | 44515306 | 44514893 | ID=Msa1289990-mRNA-1:exon:12229;Parent=Msa1289990-mRNA-1 |
chr8_3 | exon | 44515977 | 44516160 | 44515977 | ID=Msa1289990-mRNA-1:exon:12228;Parent=Msa1289990-mRNA-1 |
chr8_3 | exon | 44517355 | 44517517 | 44517355 | ID=Msa1289990-mRNA-1:exon:12227;Parent=Msa1289990-mRNA-1 |
chr8_3 | exon | 44517838 | 44518029 | 44517838 | ID=Msa1289990-mRNA-1:exon:12226;Parent=Msa1289990-mRNA-1 |
chr8_3 | exon | 44519080 | 44519249 | 44519080 | ID=Msa1289990-mRNA-1:exon:12225;Parent=Msa1289990-mRNA-1 |
chr8_3 | exon | 44519352 | 44519552 | 44519352 | ID=Msa1289990-mRNA-1:exon:12224;Parent=Msa1289990-mRNA-1 |
chr8_3 | exon | 44520795 | 44521064 | 44520795 | ID=Msa1289990-mRNA-1:exon:12223;Parent=Msa1289990-mRNA-1 |
chr8_3 | five_prime_UTR | 44520795 | 44521064 | 44520795 | ID=Msa1289990-mRNA-1:five_prime_utr;Parent=Msa1289990-mRNA-1 |
chr8_3 | five_prime_UTR | 44519470 | 44519552 | 44519470 | ID=Msa1289990-mRNA-1:five_prime_utr;Parent=Msa1289990-mRNA-1 |
chr8_3 | CDS | 44519352 | 44519469 | 44519352 | ID=Msa1289990-mRNA-1:cds;Parent=Msa1289990-mRNA-1 |
chr8_3 | CDS | 44519080 | 44519249 | 44519080 | ID=Msa1289990-mRNA-1:cds;Parent=Msa1289990-mRNA-1 |
chr8_3 | CDS | 44517838 | 44518029 | 44517838 | ID=Msa1289990-mRNA-1:cds;Parent=Msa1289990-mRNA-1 |
chr8_3 | CDS | 44517355 | 44517517 | 44517355 | ID=Msa1289990-mRNA-1:cds;Parent=Msa1289990-mRNA-1 |
chr8_3 | CDS | 44515977 | 44516160 | 44515977 | ID=Msa1289990-mRNA-1:cds;Parent=Msa1289990-mRNA-1 |
chr8_3 | CDS | 44515162 | 44515306 | 44515162 | ID=Msa1289990-mRNA-1:cds;Parent=Msa1289990-mRNA-1 |
chr8_3 | three_prime_UTR | 44514893 | 44515161 | 44514893 | ID=Msa1289990-mRNA-1:three_prime_utr;Parent=Msa1289990-mRNA-1 |
Gene Sequence |
Protein sequence |