Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145300 | XP_013469883.1 | 99.333 | 300 | 2 | 0 | 1 | 300 | 1 | 300 | 0.0 | 627 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145300 | sp|Q8L9A9|XTH8_ARATH | 82.877 | 292 | 45 | 3 | 10 | 299 | 16 | 304 | 0.0 | 515 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145300 | A0A072VQK1 | 99.333 | 300 | 2 | 0 | 1 | 300 | 1 | 300 | 0.0 | 627 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017670 | Msa1145300 | 0.825973 | 3.499416e-54 | -8.615850e-47 |
| Msa0017930 | Msa1145300 | 0.814010 | 1.915359e-51 | -8.615850e-47 |
| Msa0025160 | Msa1145300 | 0.800383 | 1.478732e-48 | -8.615850e-47 |
| Msa0040790 | Msa1145300 | 0.912923 | 1.115494e-83 | -8.615850e-47 |
| Msa0042640 | Msa1145300 | 0.804195 | 2.427295e-49 | -8.615850e-47 |
| Msa0044160 | Msa1145300 | 0.812057 | 5.135378e-51 | -8.615850e-47 |
| Msa0077340 | Msa1145300 | 0.828655 | 7.968418e-55 | -8.615850e-47 |
| Msa0077560 | Msa1145300 | 0.805465 | 1.317672e-49 | -8.615850e-47 |
| Msa0098040 | Msa1145300 | 0.820766 | 5.767234e-53 | -8.615850e-47 |
| Msa0098070 | Msa1145300 | 0.815427 | 9.297253e-52 | -8.615850e-47 |
| Msa0608700 | Msa1145300 | 0.815661 | 8.245643e-52 | -8.615850e-47 |
| Msa0617940 | Msa1145300 | 0.841323 | 5.095447e-58 | -8.615850e-47 |
| Msa0649200 | Msa1145300 | 0.812369 | 4.388228e-51 | -8.615850e-47 |
| Msa0652770 | Msa1145300 | 0.836914 | 7.077203e-57 | -8.615850e-47 |
| Msa0692790 | Msa1145300 | 0.870436 | 1.461207e-66 | -8.615850e-47 |
| Msa0700970 | Msa1145300 | 0.802868 | 4.572731e-49 | -8.615850e-47 |
| Msa0703950 | Msa1145300 | 0.850611 | 1.518662e-60 | -8.615850e-47 |
| Msa0726170 | Msa1145300 | -0.818258 | 2.152513e-52 | -8.615850e-47 |
| Msa0765960 | Msa1145300 | -0.805933 | 1.050635e-49 | -8.615850e-47 |
| Msa0792370 | Msa1145300 | 0.821061 | 4.931192e-53 | -8.615850e-47 |
| Msa0795750 | Msa1145300 | 0.843946 | 1.024445e-58 | -8.615850e-47 |
| Msa0813160 | Msa1145300 | 0.813799 | 2.131853e-51 | -8.615850e-47 |
| Msa0828960 | Msa1145300 | 0.801116 | 1.048087e-48 | -8.615850e-47 |
| Msa0833530 | Msa1145300 | 0.800128 | 1.666943e-48 | -8.615850e-47 |
| Msa0124910 | Msa1145300 | 0.810573 | 1.077787e-50 | -8.615850e-47 |
| Msa0125360 | Msa1145300 | 0.807735 | 4.371196e-50 | -8.615850e-47 |
| Msa0168480 | Msa1145300 | 0.804159 | 2.469072e-49 | -8.615850e-47 |
| Msa0169410 | Msa1145300 | 0.820298 | 7.384570e-53 | -8.615850e-47 |
| Msa0180110 | Msa1145300 | 0.807416 | 5.108601e-50 | -8.615850e-47 |
| Msa0184500 | Msa1145300 | 0.990476 | 8.144154e-183 | -8.615850e-47 |
| Msa0189270 | Msa1145300 | 0.818866 | 1.567240e-52 | -8.615850e-47 |
| Msa0203080 | Msa1145300 | 0.832539 | 8.923020e-56 | -8.615850e-47 |
| Msa0365210 | Msa1145300 | 0.818933 | 1.513730e-52 | -8.615850e-47 |
| Msa0367690 | Msa1145300 | 0.808645 | 2.797159e-50 | -8.615850e-47 |
| Msa0375640 | Msa1145300 | 0.803989 | 2.679250e-49 | -8.615850e-47 |
| Msa0412790 | Msa1145300 | 0.819882 | 9.197193e-53 | -8.615850e-47 |
| Msa0424160 | Msa1145300 | 0.805943 | 1.045826e-49 | -8.615850e-47 |
| Msa0437520 | Msa1145300 | 0.800439 | 1.440364e-48 | -8.615850e-47 |
| Msa1021590 | Msa1145300 | 0.806556 | 7.768007e-50 | -8.615850e-47 |
| Msa1022420 | Msa1145300 | 0.803995 | 2.671681e-49 | -8.615850e-47 |
| Msa1044250 | Msa1145300 | 0.812877 | 3.399052e-51 | -8.615850e-47 |
| Msa1045230 | Msa1145300 | 0.808640 | 2.804106e-50 | -8.615850e-47 |
| Msa1072940 | Msa1145300 | 0.807724 | 4.395993e-50 | -8.615850e-47 |
| Msa1106590 | Msa1145300 | 0.827732 | 1.330095e-54 | -8.615850e-47 |
| Msa0246210 | Msa1145300 | 0.811477 | 6.866998e-51 | -8.615850e-47 |
| Msa0278750 | Msa1145300 | 0.823245 | 1.536833e-53 | -8.615850e-47 |
| Msa0284800 | Msa1145300 | 0.840541 | 8.171549e-58 | -8.615850e-47 |
| Msa0288620 | Msa1145300 | 0.811962 | 5.383803e-51 | -8.615850e-47 |
| Msa0307270 | Msa1145300 | 0.816377 | 5.705197e-52 | -8.615850e-47 |
| Msa0307670 | Msa1145300 | 0.821501 | 3.903899e-53 | -8.615850e-47 |
| Msa0309720 | Msa1145300 | 0.832598 | 8.626154e-56 | -8.615850e-47 |
| Msa0313900 | Msa1145300 | 0.807975 | 3.887817e-50 | -8.615850e-47 |
| Msa0318690 | Msa1145300 | 0.826699 | 2.350224e-54 | -8.615850e-47 |
| Msa0330520 | Msa1145300 | 0.880782 | 4.133232e-70 | -8.615850e-47 |
| Msa1109390 | Msa1145300 | 0.801215 | 1.000207e-48 | -8.615850e-47 |
| Msa1145300 | Msa1160920 | 0.802556 | 5.304146e-49 | -8.615850e-47 |
| Msa1145300 | Msa1341840 | 0.813814 | 2.115240e-51 | -8.615850e-47 |
| Msa1145300 | Msa1382300 | 0.830859 | 2.316589e-55 | -8.615850e-47 |
| Msa1145300 | Msa1405460 | 0.815266 | 1.009778e-51 | -8.615850e-47 |
| Msa1145300 | Msa1407840 | 0.840419 | 8.796217e-58 | -8.615850e-47 |
| Msa1145300 | Msa1412000 | 0.833710 | 4.560221e-56 | -8.615850e-47 |
| Msa1145300 | Msa1427110 | 0.811263 | 7.642685e-51 | -8.615850e-47 |
| Msa1145300 | Msa1437810 | 0.836513 | 8.955259e-57 | -8.615850e-47 |
| Msa1145300 | Msa1454500 | 0.832705 | 8.117270e-56 | -8.615850e-47 |
| Msa1145300 | Msa1457890 | 0.807010 | 6.228158e-50 | -8.615850e-47 |
| Msa1145300 | Msa1461370 | 0.803588 | 3.244629e-49 | -8.615850e-47 |
| Msa1145300 | Msa1463950 | 0.817502 | 3.189887e-52 | -8.615850e-47 |
| Msa0519760 | Msa1145300 | 0.817720 | 2.848400e-52 | -8.615850e-47 |
| Msa0519810 | Msa1145300 | 0.817170 | 3.787964e-52 | -8.615850e-47 |
| Msa0519840 | Msa1145300 | 0.821125 | 4.766577e-53 | -8.615850e-47 |
| Msa0529030 | Msa1145300 | 0.808733 | 2.678459e-50 | -8.615850e-47 |
| Msa0567610 | Msa1145300 | 0.811304 | 7.487689e-51 | -8.615850e-47 |
| Msa0574900 | Msa1145300 | 0.812101 | 5.022135e-51 | -8.615850e-47 |
| Msa0851850 | Msa1145300 | 0.828419 | 9.084780e-55 | -8.615850e-47 |
| Msa0903340 | Msa1145300 | 0.803025 | 4.244491e-49 | -8.615850e-47 |
| Msa0935740 | Msa1145300 | 0.814674 | 1.365817e-51 | -8.615850e-47 |
| Msa0945190 | Msa1145300 | 0.829721 | 4.392540e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145300 | MtrunA17_Chr1g0206081 | 99.333 | 300 | 2 | 0 | 1 | 300 | 1 | 300 | 0.0 | 627 |
| Msa1145300 | MtrunA17_Chr4g0054451 | 53.435 | 262 | 118 | 2 | 33 | 294 | 32 | 289 | 1.09e-99 | 294 |
| Msa1145300 | MtrunA17_Chr4g0054431 | 53.435 | 262 | 118 | 2 | 33 | 294 | 30 | 287 | 1.11e-99 | 294 |
| Msa1145300 | MtrunA17_Chr1g0206681 | 45.918 | 294 | 154 | 3 | 5 | 296 | 3 | 293 | 1.36e-97 | 289 |
| Msa1145300 | MtrunA17_Chr7g0252631 | 48.966 | 290 | 144 | 2 | 5 | 294 | 2 | 287 | 1.10e-94 | 281 |
| Msa1145300 | MtrunA17_Chr7g0252621 | 48.454 | 291 | 146 | 2 | 5 | 295 | 2 | 288 | 1.46e-93 | 279 |
| Msa1145300 | MtrunA17_Chr6g0461761 | 48.592 | 284 | 142 | 2 | 12 | 295 | 9 | 288 | 1.49e-93 | 278 |
| Msa1145300 | MtrunA17_Chr6g0461731 | 47.751 | 289 | 147 | 2 | 7 | 295 | 27 | 311 | 1.58e-93 | 279 |
| Msa1145300 | MtrunA17_Chr7g0252601 | 48.227 | 282 | 142 | 2 | 13 | 294 | 10 | 287 | 6.21e-93 | 277 |
| Msa1145300 | MtrunA17_Chr2g0323161 | 49.265 | 272 | 126 | 4 | 30 | 294 | 20 | 286 | 1.37e-91 | 273 |
| Msa1145300 | MtrunA17_Chr4g0023961 | 45.946 | 296 | 138 | 5 | 6 | 294 | 8 | 288 | 1.48e-88 | 266 |
| Msa1145300 | MtrunA17_Chr4g0072611 | 46.780 | 295 | 142 | 5 | 5 | 297 | 2 | 283 | 3.61e-87 | 262 |
| Msa1145300 | MtrunA17_Chr7g0258911 | 47.079 | 291 | 141 | 5 | 8 | 296 | 2 | 281 | 3.18e-86 | 259 |
| Msa1145300 | MtrunA17_Chr8g0377841 | 44.792 | 288 | 143 | 6 | 9 | 295 | 10 | 282 | 8.34e-84 | 253 |
| Msa1145300 | MtrunA17_Chr3g0122021 | 43.929 | 280 | 145 | 3 | 16 | 294 | 9 | 277 | 7.35e-83 | 251 |
| Msa1145300 | MtrunA17_Chr3g0122031 | 44.245 | 278 | 143 | 3 | 18 | 294 | 11 | 277 | 8.65e-83 | 251 |
| Msa1145300 | MtrunA17_Chr4g0072671 | 46.931 | 277 | 133 | 5 | 28 | 297 | 19 | 288 | 6.87e-81 | 246 |
| Msa1145300 | MtrunA17_Chr4g0071341 | 45.055 | 273 | 139 | 4 | 29 | 297 | 19 | 284 | 1.37e-80 | 245 |
| Msa1145300 | MtrunA17_Chr2g0299061 | 43.986 | 291 | 149 | 4 | 11 | 297 | 9 | 289 | 1.59e-79 | 243 |
| Msa1145300 | MtrunA17_Chr6g0486581 | 41.958 | 286 | 152 | 5 | 12 | 294 | 9 | 283 | 1.06e-78 | 241 |
| Msa1145300 | MtrunA17_Chr4g0072601 | 42.807 | 285 | 151 | 4 | 14 | 294 | 7 | 283 | 3.77e-77 | 237 |
| Msa1145300 | MtrunA17_Chr8g0340001 | 48.523 | 237 | 115 | 4 | 59 | 294 | 1 | 231 | 3.08e-74 | 227 |
| Msa1145300 | MtrunA17_Chr8g0374231 | 98.131 | 107 | 2 | 0 | 194 | 300 | 1 | 107 | 3.95e-74 | 223 |
| Msa1145300 | MtrunA17_Chr8g0389641 | 40.925 | 281 | 118 | 5 | 18 | 297 | 12 | 245 | 3.19e-72 | 223 |
| Msa1145300 | MtrunA17_Chr4g0072681 | 49.333 | 225 | 107 | 3 | 77 | 297 | 25 | 246 | 6.13e-71 | 219 |
| Msa1145300 | MtrunA17_Chr5g0443391 | 41.065 | 263 | 144 | 4 | 33 | 294 | 26 | 278 | 3.38e-68 | 214 |
| Msa1145300 | MtrunA17_Chr3g0096651 | 42.803 | 264 | 140 | 5 | 33 | 294 | 28 | 282 | 1.50e-65 | 207 |
| Msa1145300 | MtrunA17_Chr2g0303861 | 36.861 | 274 | 164 | 7 | 9 | 281 | 3 | 268 | 2.18e-61 | 196 |
| Msa1145300 | MtrunA17_Chr8g0390201 | 46.354 | 192 | 100 | 2 | 106 | 294 | 18 | 209 | 9.44e-61 | 192 |
| Msa1145300 | MtrunA17_Chr8g0375981 | 36.271 | 295 | 176 | 6 | 9 | 300 | 11 | 296 | 3.08e-59 | 192 |
| Msa1145300 | MtrunA17_Chr4g0028221 | 37.993 | 279 | 156 | 8 | 21 | 294 | 38 | 304 | 1.13e-58 | 190 |
| Msa1145300 | MtrunA17_Chr7g0235541 | 44.495 | 218 | 109 | 7 | 82 | 296 | 1 | 209 | 1.31e-58 | 186 |
| Msa1145300 | MtrunA17_Chr8g0365231 | 35.099 | 302 | 179 | 7 | 8 | 294 | 11 | 310 | 1.74e-58 | 189 |
| Msa1145300 | MtrunA17_Chr5g0410621 | 38.686 | 274 | 156 | 6 | 35 | 300 | 42 | 311 | 1.94e-58 | 191 |
| Msa1145300 | MtrunA17_Chr2g0327411 | 37.979 | 287 | 156 | 9 | 16 | 294 | 37 | 309 | 5.55e-57 | 186 |
| Msa1145300 | MtrunA17_Chr1g0180451 | 34.768 | 302 | 165 | 9 | 9 | 294 | 9 | 294 | 1.21e-55 | 182 |
| Msa1145300 | MtrunA17_Chr2g0303721 | 34.708 | 291 | 167 | 9 | 10 | 298 | 5 | 274 | 1.89e-54 | 178 |
| Msa1145300 | MtrunA17_Chr8g0382041 | 35.316 | 269 | 169 | 4 | 35 | 300 | 34 | 300 | 2.89e-54 | 179 |
| Msa1145300 | MtrunA17_Chr7g0264731 | 37.132 | 272 | 144 | 8 | 35 | 295 | 37 | 292 | 7.33e-54 | 177 |
| Msa1145300 | MtrunA17_Chr1g0161951 | 36.704 | 267 | 158 | 6 | 35 | 296 | 33 | 293 | 1.32e-53 | 177 |
| Msa1145300 | MtrunA17_Chr4g0072641 | 42.748 | 131 | 58 | 3 | 168 | 297 | 37 | 151 | 1.84e-28 | 107 |
| Msa1145300 | MtrunA17_Chr8g0374241 | 97.222 | 36 | 1 | 0 | 100 | 135 | 1 | 36 | 2.03e-19 | 79.7 |
| Msa1145300 | MtrunA17_Chr8g0350711 | 34.682 | 173 | 106 | 4 | 59 | 231 | 56 | 221 | 9.58e-18 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145300 | AT1G11545.1 | 82.877 | 292 | 45 | 3 | 10 | 299 | 16 | 304 | 0.0 | 515 |
| Msa1145300 | AT5G13870.2 | 50.859 | 291 | 138 | 3 | 4 | 294 | 2 | 287 | 5.41e-98 | 290 |
| Msa1145300 | AT5G13870.1 | 50.859 | 291 | 138 | 3 | 4 | 294 | 2 | 287 | 5.41e-98 | 290 |
| Msa1145300 | AT5G13870.3 | 50.859 | 291 | 138 | 3 | 4 | 294 | 2 | 287 | 5.41e-98 | 290 |
| Msa1145300 | AT4G37800.1 | 49.141 | 291 | 141 | 4 | 6 | 295 | 6 | 290 | 2.96e-97 | 288 |
| Msa1145300 | AT5G65730.1 | 47.735 | 287 | 146 | 2 | 8 | 294 | 8 | 290 | 3.48e-96 | 286 |
| Msa1145300 | AT2G06850.1 | 53.846 | 260 | 116 | 2 | 35 | 294 | 35 | 290 | 2.89e-93 | 278 |
| Msa1145300 | AT2G06850.2 | 57.143 | 231 | 95 | 2 | 65 | 295 | 5 | 231 | 3.26e-90 | 268 |
| Msa1145300 | AT2G14620.1 | 45.675 | 289 | 151 | 3 | 11 | 296 | 11 | 296 | 4.48e-90 | 270 |
| Msa1145300 | AT4G03210.1 | 46.528 | 288 | 142 | 5 | 9 | 294 | 7 | 284 | 2.02e-89 | 268 |
| Msa1145300 | AT5G57560.1 | 44.369 | 293 | 142 | 5 | 8 | 294 | 4 | 281 | 5.17e-86 | 259 |
| Msa1145300 | AT3G23730.1 | 43.813 | 299 | 152 | 5 | 4 | 297 | 2 | 289 | 2.12e-84 | 256 |
| Msa1145300 | AT5G57550.1 | 46.102 | 295 | 145 | 7 | 1 | 294 | 1 | 282 | 1.34e-83 | 253 |
| Msa1145300 | AT5G57540.1 | 48.881 | 268 | 127 | 5 | 33 | 297 | 24 | 284 | 1.38e-83 | 253 |
| Msa1145300 | AT5G57530.1 | 47.794 | 272 | 132 | 5 | 29 | 297 | 21 | 285 | 3.80e-83 | 252 |
| Msa1145300 | AT4G25810.1 | 43.310 | 284 | 157 | 2 | 12 | 294 | 3 | 283 | 7.71e-83 | 251 |
| Msa1145300 | AT4G03210.2 | 52.174 | 230 | 104 | 3 | 67 | 294 | 31 | 256 | 1.37e-82 | 250 |
| Msa1145300 | AT4G30270.1 | 43.003 | 293 | 141 | 5 | 6 | 297 | 1 | 268 | 2.94e-81 | 247 |
| Msa1145300 | AT4G25820.1 | 46.520 | 273 | 134 | 4 | 28 | 296 | 23 | 287 | 4.64e-80 | 244 |
| Msa1145300 | AT4G14130.1 | 42.905 | 296 | 157 | 6 | 4 | 297 | 2 | 287 | 2.21e-79 | 243 |
| Msa1145300 | AT2G14620.2 | 49.138 | 232 | 114 | 2 | 66 | 296 | 18 | 246 | 5.08e-79 | 240 |
| Msa1145300 | AT4G13090.1 | 42.756 | 283 | 155 | 4 | 15 | 294 | 10 | 288 | 1.22e-77 | 238 |
| Msa1145300 | AT2G14620.3 | 49.776 | 223 | 108 | 2 | 75 | 296 | 16 | 235 | 2.38e-76 | 233 |
| Msa1145300 | AT5G48070.1 | 41.297 | 293 | 157 | 6 | 5 | 295 | 3 | 282 | 1.29e-75 | 233 |
| Msa1145300 | AT3G25050.1 | 38.966 | 290 | 169 | 5 | 6 | 294 | 7 | 289 | 3.58e-75 | 232 |
| Msa1145300 | AT4G13080.1 | 40.138 | 289 | 166 | 4 | 6 | 294 | 10 | 291 | 7.97e-74 | 229 |
| Msa1145300 | AT4G28850.1 | 41.053 | 285 | 159 | 5 | 15 | 295 | 9 | 288 | 8.10e-74 | 229 |
| Msa1145300 | AT2G18800.1 | 39.423 | 312 | 157 | 7 | 1 | 295 | 1 | 297 | 5.89e-72 | 224 |
| Msa1145300 | AT4G30280.1 | 40.678 | 295 | 155 | 6 | 3 | 295 | 6 | 282 | 1.76e-70 | 220 |
| Msa1145300 | AT4G30290.1 | 39.932 | 293 | 156 | 6 | 5 | 295 | 3 | 277 | 3.11e-68 | 214 |
| Msa1145300 | AT1G65310.1 | 43.019 | 265 | 140 | 5 | 33 | 295 | 27 | 282 | 3.54e-68 | 214 |
| Msa1145300 | AT1G65310.2 | 43.019 | 265 | 140 | 5 | 33 | 295 | 49 | 304 | 3.99e-68 | 214 |
| Msa1145300 | AT2G01850.1 | 35.714 | 294 | 181 | 4 | 11 | 300 | 7 | 296 | 2.40e-61 | 198 |
| Msa1145300 | AT1G32170.1 | 38.079 | 302 | 177 | 6 | 5 | 300 | 2 | 299 | 4.18e-61 | 197 |
| Msa1145300 | AT3G44990.1 | 37.874 | 301 | 157 | 7 | 12 | 294 | 5 | 293 | 1.65e-60 | 194 |
| Msa1145300 | AT1G14720.1 | 35.836 | 293 | 180 | 4 | 12 | 300 | 8 | 296 | 6.00e-59 | 192 |
| Msa1145300 | AT1G10550.1 | 35.740 | 277 | 160 | 4 | 35 | 294 | 34 | 309 | 8.22e-57 | 186 |
| Msa1145300 | AT4G18990.1 | 35.714 | 280 | 165 | 3 | 35 | 300 | 40 | 318 | 5.69e-55 | 182 |
| Msa1145300 | AT2G36870.1 | 34.000 | 300 | 176 | 8 | 6 | 294 | 9 | 297 | 7.72e-53 | 175 |
| Msa1145300 | AT3G48580.1 | 33.977 | 259 | 149 | 8 | 37 | 294 | 36 | 273 | 4.82e-48 | 162 |
| Msa1145300 | AT3G48580.3 | 36.364 | 231 | 126 | 7 | 65 | 294 | 4 | 214 | 1.76e-46 | 156 |
| Msa1145300 | AT4G18990.2 | 35.021 | 237 | 133 | 5 | 84 | 300 | 9 | 244 | 7.64e-41 | 143 |
| Msa1145300 | AT3G48580.2 | 28.571 | 259 | 143 | 9 | 37 | 294 | 36 | 253 | 1.82e-31 | 118 |
| Msa1145300 | AT2G36870.2 | 35.260 | 173 | 98 | 4 | 6 | 167 | 9 | 178 | 4.36e-28 | 107 |
Find 91 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCAAGTTCATCTCTTTC+TGG | 0.152227 | 7_4:+21988599 | None:intergenic |
| TGTAAACTTCATTTGTTATA+TGG | 0.157148 | 7_4:+21987428 | None:intergenic |
| TATGATGCTTGGCATCTTTC+AGG | 0.170390 | 7_4:-21987700 | Msa1145300:CDS |
| AAAGGACCCTCCATCCATTT+TGG | 0.172552 | 7_4:+21989505 | None:intergenic |
| TTGTTCTTGAACACCCTTAT+TGG | 0.227899 | 7_4:+21987943 | None:intergenic |
| TTTGGGTAGGAGGAGAATTT+TGG | 0.254879 | 7_4:+21989523 | None:intergenic |
| AATTCTCCTCCTACCCAAAA+TGG | 0.278749 | 7_4:-21989519 | Msa1145300:exon |
| AAGTACATTGGTTTCTCATT+TGG | 0.290156 | 7_4:+21987898 | None:intergenic |
| ACATTTGTTTGAATCAAATA+TGG | 0.300118 | 7_4:+21988548 | None:intergenic |
| TTGTGGATAGAGTTCCAATA+AGG | 0.315911 | 7_4:-21987957 | Msa1145300:CDS |
| GATAGAGATTTACATGTTCA+TGG | 0.321658 | 7_4:+21987319 | None:intergenic |
| TCTTTCAGGTGATCAGAAAA+TGG | 0.325557 | 7_4:-21987686 | Msa1145300:CDS |
| ATGGAGGGATTCTCTACTTC+TGG | 0.332348 | 7_4:+21989555 | None:intergenic |
| GTAAACTTCATTTGTTATAT+GGG | 0.336589 | 7_4:+21987429 | None:intergenic |
| AAGAATGAACTTACACTATC+TGG | 0.346292 | 7_4:+21988429 | None:intergenic |
| GTTCAGTATGAAGCTGAAAT+TGG | 0.347997 | 7_4:-21988817 | Msa1145300:CDS |
| AGTACATTGGTTTCTCATTT+GGG | 0.354048 | 7_4:+21987899 | None:intergenic |
| AGCAGAAGCAGCTATGTCTA+AGG | 0.356338 | 7_4:-21989426 | Msa1145300:CDS |
| GGACTCAATGAGCACTCTTC+AGG | 0.364578 | 7_4:+21987592 | None:intergenic |
| GTTGAAACACATTTAGGAAA+TGG | 0.376286 | 7_4:+21987748 | None:intergenic |
| ATGATAATAAGCAGCTACTA+TGG | 0.378445 | 7_4:+21989451 | None:intergenic |
| TCATTTGGGAAGAAATTGTT+TGG | 0.386974 | 7_4:+21987913 | None:intergenic |
| GGATCTCTGAACCCGAGGTT+TGG | 0.394261 | 7_4:+21989576 | None:intergenic |
| CATCTGTAGAGGTAGTAAAA+TGG | 0.396419 | 7_4:+21989363 | None:intergenic |
| GTTGTGGTTGAAACACATTT+AGG | 0.398748 | 7_4:+21987742 | None:intergenic |
| ACAAAACAAAGATACAGATT+TGG | 0.405420 | 7_4:-21988843 | Msa1145300:CDS |
| ATCACACCTATTCTATTCTC+TGG | 0.408329 | 7_4:-21988460 | Msa1145300:CDS |
| ATCAGAAAATGGATTATGCT+TGG | 0.410696 | 7_4:-21987675 | Msa1145300:CDS |
| CAAACAAATGTGTACAAGAA+TGG | 0.414124 | 7_4:-21988536 | Msa1145300:CDS |
| TTGCAGATGTGTACAGAAAA+TGG | 0.418568 | 7_4:-21988629 | Msa1145300:intron |
| ATCAACACTAAAGTCTTTGT+AGG | 0.426921 | 7_4:+21987789 | None:intergenic |
| GTGAGATGAGACATATGCTT+TGG | 0.427321 | 7_4:-21988502 | Msa1145300:CDS |
| GAGCACTCTTCAGGCAAAGT+TGG | 0.439518 | 7_4:+21987601 | None:intergenic |
| AAACAAATGTGTACAAGAAT+GGG | 0.444792 | 7_4:-21988535 | Msa1145300:CDS |
| AAGAATGGAAAATGAAGAAA+AGG | 0.445067 | 7_4:+21989487 | None:intergenic |
| TGTGGATAGAGTTCCAATAA+GGG | 0.449235 | 7_4:-21987956 | Msa1145300:CDS |
| TCAGAAAATGGATTATGCTT+GGG | 0.479320 | 7_4:-21987674 | Msa1145300:CDS |
| TCCATGGGAGTAATGTATCA+TGG | 0.480160 | 7_4:-21987572 | Msa1145300:exon |
| AAGAGTGCTCATTGAGTCCA+TGG | 0.488497 | 7_4:-21987588 | Msa1145300:CDS |
| TATAACAAATGAAGTTTACA+TGG | 0.489458 | 7_4:-21987425 | Msa1145300:three_prime_UTR |
| GTTATTCCAGAGAATAGAAT+AGG | 0.498751 | 7_4:+21988454 | None:intergenic |
| TTATTGAACTTCCAAACCTC+GGG | 0.499927 | 7_4:-21989587 | Msa1145300:five_prime_UTR |
| TGCATAATATATGCAAGGTC+CGG | 0.505110 | 7_4:+21987346 | None:intergenic |
| GGCTGCAAGGAAAAGAAGAA+TGG | 0.506963 | 7_4:+21989472 | None:intergenic |
| GTCACGATGTTATAAGTGAA+TGG | 0.513067 | 7_4:-21989723 | Msa1145300:five_prime_UTR |
| CCATGGGAGTAATGTATCAT+GGG | 0.513209 | 7_4:-21987571 | Msa1145300:exon |
| GTGTATGGAATGCAGATGAT+TGG | 0.516261 | 7_4:-21987867 | Msa1145300:CDS |
| ATGTGTACAGAAAATGGTGC+AGG | 0.516508 | 7_4:-21988623 | Msa1145300:CDS |
| GGTGGCCGGTGTTCGAACTC+CGG | 0.524090 | 7_4:-21987365 | Msa1145300:three_prime_UTR |
| TTAGTGTTGATGCTTGTCAA+TGG | 0.533968 | 7_4:-21987777 | Msa1145300:CDS |
| ACACTTGAAAACAAGTACAT+TGG | 0.541308 | 7_4:+21987886 | None:intergenic |
| CCTCTACAGATGGACAGATC+TGG | 0.542190 | 7_4:-21989352 | Msa1145300:CDS |
| TATTAAACAACTAAACAAAG+TGG | 0.542281 | 7_4:-21989670 | Msa1145300:five_prime_UTR |
| GCATATGATGTTACAACTGT+AGG | 0.546615 | 7_4:-21989640 | Msa1145300:five_prime_UTR |
| TAGTGTTGATGCTTGTCAAT+GGG | 0.548485 | 7_4:-21987776 | Msa1145300:CDS |
| TTTATTGAACTTCCAAACCT+CGG | 0.551560 | 7_4:-21989588 | Msa1145300:five_prime_UTR |
| TGTATGGAATGCAGATGATT+GGG | 0.552558 | 7_4:-21987866 | Msa1145300:CDS |
| CCCATGATACATTACTCCCA+TGG | 0.558590 | 7_4:+21987571 | None:intergenic |
| GATGATTGGGCCACAAGAGG+TGG | 0.559220 | 7_4:-21987853 | Msa1145300:CDS |
| AATGTGTACAAGAATGGGAC+AGG | 0.565601 | 7_4:-21988530 | Msa1145300:CDS |
| CCTCGTGATCTTAACTCAGT+TGG | 0.570654 | 7_4:+21987274 | None:intergenic |
| TCCTACCCAAAATGGATGGA+GGG | 0.570885 | 7_4:-21989511 | Msa1145300:exon |
| GCAGAAGCAGCTATGTCTAA+GGG | 0.571565 | 7_4:-21989425 | Msa1145300:CDS |
| CTCCTACCCAAAATGGATGG+AGG | 0.581100 | 7_4:-21989512 | Msa1145300:exon |
| CTCCTCCTACCCAAAATGGA+TGG | 0.582425 | 7_4:-21989515 | Msa1145300:exon |
| TGCAATAGTCATAGATGACA+AGG | 0.582934 | 7_4:+21987641 | None:intergenic |
| TTGGTAGGAGGTGATTCTGC+TGG | 0.585894 | 7_4:-21988798 | Msa1145300:CDS |
| GACAATGCATAATATATGCA+AGG | 0.589437 | 7_4:+21987341 | None:intergenic |
| AACAAAGATACAGATTTGGA+TGG | 0.590115 | 7_4:-21988839 | Msa1145300:CDS |
| GGTGGGATCAATATGATGCT+TGG | 0.593619 | 7_4:-21987711 | Msa1145300:CDS |
| TTGTTTAATAAATTTGCATG+TGG | 0.595209 | 7_4:+21989683 | None:intergenic |
| AGTATGAAGCTGAAATTGGT+AGG | 0.601753 | 7_4:-21988813 | Msa1145300:CDS |
| GCAGATGATTGGGCCACAAG+AGG | 0.605501 | 7_4:-21987856 | Msa1145300:CDS |
| AAGCAGCTACTATGGCTGCA+AGG | 0.616062 | 7_4:+21989459 | None:intergenic |
| CCAGATCTGTCCATCTGTAG+AGG | 0.619087 | 7_4:+21989352 | None:intergenic |
| TAGGTGTGATAGTCCTCAGT+GGG | 0.619254 | 7_4:+21988473 | None:intergenic |
| CTTCTGGATCTCTGAACCCG+AGG | 0.625868 | 7_4:+21989571 | None:intergenic |
| AAGACAACTTCAGCATAATG+TGG | 0.628622 | 7_4:-21989394 | Msa1145300:CDS |
| TCTTTGTAGGATGACACAAA+TGG | 0.631516 | 7_4:+21987802 | None:intergenic |
| CTATCTATGAACATGTTGAA+CGG | 0.632795 | 7_4:-21987239 | None:intergenic |
| TTGAATGTTTGACAGGATGT+GGG | 0.642879 | 7_4:-21988872 | Msa1145300:intron |
| ATGAAGCTGAAATTGGTAGG+AGG | 0.646766 | 7_4:-21988810 | Msa1145300:CDS |
| AGAGTGCTCATTGAGTCCAT+GGG | 0.653623 | 7_4:-21987587 | Msa1145300:CDS |
| TGTGTACAGAAAATGGTGCA+GGG | 0.655933 | 7_4:-21988622 | Msa1145300:CDS |
| AATGAACTTACACTATCTGG+TGG | 0.659740 | 7_4:+21988432 | None:intergenic |
| CCAACTGAGTTAAGATCACG+AGG | 0.667124 | 7_4:-21987274 | Msa1145300:three_prime_UTR |
| CTCTCATTAGACAATGACAC+AGG | 0.668040 | 7_4:-21989326 | Msa1145300:intron |
| CATGGGAGTAATGTATCATG+GGG | 0.672948 | 7_4:-21987570 | Msa1145300:exon |
| AAGGTCCGGAGTTCGAACAC+CGG | 0.675648 | 7_4:+21987360 | None:intergenic |
| GCTTTGGTTTGATCCCACTG+AGG | 0.724888 | 7_4:-21988486 | Msa1145300:CDS |
| ATAGGTGTGATAGTCCTCAG+TGG | 0.744401 | 7_4:+21988472 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCGATAGAATTAATTTT+GGG | - | chr7_4:21987942-21987961 | Msa1145300:CDS | 15.0% |
| !! | TTGTTTAATAAATTTGCATG+TGG | + | chr7_4:21987282-21987301 | None:intergenic | 20.0% |
| !! | TATTAAACAACTAAACAAAG+TGG | - | chr7_4:21987292-21987311 | Msa1145300:three_prime_UTR | 20.0% |
| !!! | GATTTACATAAACTTACTTT+TGG | - | chr7_4:21987875-21987894 | Msa1145300:CDS | 20.0% |
| !!! | CTTTTCGATAGAATTAATTT+TGG | - | chr7_4:21987941-21987960 | Msa1145300:CDS | 20.0% |
| !!! | AAAGTTGAGAGTATAATTTA+TGG | - | chr7_4:21987980-21987999 | Msa1145300:intron | 20.0% |
| !!! | AACATTCAATGCTTTAAAAA+TGG | + | chr7_4:21988079-21988098 | None:intergenic | 20.0% |
| !! | ACATTTGTTTGAATCAAATA+TGG | + | chr7_4:21988417-21988436 | None:intergenic | 20.0% |
| !!! | TTGATGTCATTTTTTTACTT+GGG | + | chr7_4:21988592-21988611 | None:intergenic | 20.0% |
| !!! | TTTGATGTCATTTTTTTACT+TGG | + | chr7_4:21988593-21988612 | None:intergenic | 20.0% |
| !!! | AGTTTAAGACTTTTTGTTTT+TGG | - | chr7_4:21988707-21988726 | Msa1145300:intron | 20.0% |
| !! | ATGAATATGATTATGTCATA+TGG | - | chr7_4:21988841-21988860 | Msa1145300:CDS | 20.0% |
| !! | TAAAAAGACCTTATATTTCA+AGG | - | chr7_4:21988891-21988910 | Msa1145300:intron | 20.0% |
| !! | AAAAAGACCTTATATTTCAA+GGG | - | chr7_4:21988892-21988911 | Msa1145300:intron | 20.0% |
| !! | ACCTTAATTCAAGATATTTA+TGG | - | chr7_4:21988932-21988951 | Msa1145300:intron | 20.0% |
| !! | TCCATAAATATCTTGAATTA+AGG | + | chr7_4:21988936-21988955 | None:intergenic | 20.0% |
| !!! | GTAAACTTCATTTGTTATAT+GGG | + | chr7_4:21989536-21989555 | None:intergenic | 20.0% |
| !!! | TGTAAACTTCATTTGTTATA+TGG | + | chr7_4:21989537-21989556 | None:intergenic | 20.0% |
| !! | TATAACAAATGAAGTTTACA+TGG | - | chr7_4:21989537-21989556 | Msa1145300:five_prime_UTR | 20.0% |
| ! | AAGAATGGAAAATGAAGAAA+AGG | + | chr7_4:21987478-21987497 | None:intergenic | 25.0% |
| !! | AAATACTCTAAGAGTTTGTT+CGG | - | chr7_4:21987782-21987801 | Msa1145300:CDS | 25.0% |
| !!! | AAACTTACTTTTGGATAGTT+TGG | - | chr7_4:21987884-21987903 | Msa1145300:CDS | 25.0% |
| !!! | ATAGAATTAATTTTGGGACT+AGG | - | chr7_4:21987948-21987967 | Msa1145300:CDS | 25.0% |
| ! | ACAAAACAAAGATACAGATT+TGG | - | chr7_4:21988119-21988138 | Msa1145300:intron | 25.0% |
| ! | GGATTCATAAAAACACAAAA+AGG | + | chr7_4:21988280-21988299 | None:intergenic | 25.0% |
| !!! | TGTGTTTTTATGAATCCAAT+TGG | - | chr7_4:21988283-21988302 | Msa1145300:intron | 25.0% |
| !!! | TGAACTTGATTTTGAGTTTT+TGG | - | chr7_4:21988374-21988393 | Msa1145300:intron | 25.0% |
| !!! | GAACTTGATTTTGAGTTTTT+GGG | - | chr7_4:21988375-21988394 | Msa1145300:intron | 25.0% |
| ! | AAACAAATGTGTACAAGAAT+GGG | - | chr7_4:21988427-21988446 | Msa1145300:intron | 25.0% |
| ! | CATTCTTATATTGCTCTTAT+TGG | - | chr7_4:21988549-21988568 | Msa1145300:CDS | 25.0% |
| !!! | TTAAGACTTTTTGTTTTTGG+TGG | - | chr7_4:21988710-21988729 | Msa1145300:intron | 25.0% |
| ! | AGTAAAATGTATGTCCAATA+TGG | - | chr7_4:21988783-21988802 | Msa1145300:CDS | 25.0% |
| ! | CTAGCAATGATAATTAAACT+AGG | + | chr7_4:21988813-21988832 | None:intergenic | 25.0% |
| ! | TTTCAACCACAACAAAAAAT+TGG | - | chr7_4:21989230-21989249 | Msa1145300:intron | 25.0% |
| TTTATTGAACTTCCAAACCT+CGG | - | chr7_4:21987374-21987393 | Msa1145300:three_prime_UTR | 30.0% | |
| !!! | AGAATTTTGGTTCAAGAGAA+TGG | + | chr7_4:21987429-21987448 | None:intergenic | 30.0% |
| ATGATAATAAGCAGCTACTA+TGG | + | chr7_4:21987514-21987533 | None:intergenic | 30.0% | |
| GAGTAAGTCAAACATTATTC+TGG | - | chr7_4:21988016-21988035 | Msa1145300:intron | 30.0% | |
| AAGTCAAACATTATTCTGGA+AGG | - | chr7_4:21988020-21988039 | Msa1145300:intron | 30.0% | |
| !! | TAAAGCATTGAATGTTTGAC+AGG | - | chr7_4:21988083-21988102 | Msa1145300:intron | 30.0% |
| AACAAAGATACAGATTTGGA+TGG | - | chr7_4:21988123-21988142 | Msa1145300:intron | 30.0% | |
| ! | GTTTTTATGAATCCAATTGG+TGG | - | chr7_4:21988286-21988305 | Msa1145300:intron | 30.0% |
| AAATCAAGTTCATCTCTTTC+TGG | + | chr7_4:21988366-21988385 | None:intergenic | 30.0% | |
| CAAACAAATGTGTACAAGAA+TGG | - | chr7_4:21988426-21988445 | Msa1145300:intron | 30.0% | |
| GTTATTCCAGAGAATAGAAT+AGG | + | chr7_4:21988511-21988530 | None:intergenic | 30.0% | |
| AAGAATGAACTTACACTATC+TGG | + | chr7_4:21988536-21988555 | None:intergenic | 30.0% | |
| ! | CATCAAAGTGTTTGCAAATA+TGG | - | chr7_4:21988606-21988625 | Msa1145300:CDS | 30.0% |
| GTGTTTGCAAATATGGTAAT+AGG | - | chr7_4:21988613-21988632 | Msa1145300:CDS | 30.0% | |
| AATATGGTAATAGGCTAAGT+TGG | - | chr7_4:21988622-21988641 | Msa1145300:CDS | 30.0% | |
| !!! | TTTATGCTTTTGTCGGTTTA+AGG | - | chr7_4:21988653-21988672 | Msa1145300:intron | 30.0% |
| !!! | TTATGCTTTTGTCGGTTTAA+GGG | - | chr7_4:21988654-21988673 | Msa1145300:intron | 30.0% |
| TTGACAATTGAGAAAAGAGA+AGG | + | chr7_4:21988681-21988700 | None:intergenic | 30.0% | |
| TTTGGTGGAAATAATAGTGT+AGG | - | chr7_4:21988725-21988744 | Msa1145300:intron | 30.0% | |
| AAAATGTATGTCCAATATGG+TGG | - | chr7_4:21988786-21988805 | Msa1145300:CDS | 30.0% | |
| ATCTGTACCCTTGAAATATA+AGG | + | chr7_4:21988902-21988921 | None:intergenic | 30.0% | |
| ACTGAATGTTGCAAATGAAT+TGG | - | chr7_4:21988971-21988990 | Msa1145300:intron | 30.0% | |
| !!! | AATTGGAAACAGGTTTTTTG+TGG | - | chr7_4:21988988-21989007 | Msa1145300:intron | 30.0% |
| TCATTTGGGAAGAAATTGTT+TGG | + | chr7_4:21989052-21989071 | None:intergenic | 30.0% | |
| !! | AGTACATTGGTTTCTCATTT+GGG | + | chr7_4:21989066-21989085 | None:intergenic | 30.0% |
| !! | AAGTACATTGGTTTCTCATT+TGG | + | chr7_4:21989067-21989086 | None:intergenic | 30.0% |
| ACACTTGAAAACAAGTACAT+TGG | + | chr7_4:21989079-21989098 | None:intergenic | 30.0% | |
| !!! | TGTACTTGTTTTCAAGTGTA+TGG | - | chr7_4:21989080-21989099 | Msa1145300:intron | 30.0% |
| ATCAACACTAAAGTCTTTGT+AGG | + | chr7_4:21989176-21989195 | None:intergenic | 30.0% | |
| GTTGAAACACATTTAGGAAA+TGG | + | chr7_4:21989217-21989236 | None:intergenic | 30.0% | |
| AACCACAACAAAAAATTGGT+GGG | - | chr7_4:21989234-21989253 | Msa1145300:intron | 30.0% | |
| !! | ATCAGAAAATGGATTATGCT+TGG | - | chr7_4:21989287-21989306 | Msa1145300:intron | 30.0% |
| !! | TCAGAAAATGGATTATGCTT+GGG | - | chr7_4:21989288-21989307 | Msa1145300:intron | 30.0% |
| !!! | CGTCAATCTCTATCTTTTTT+TGG | - | chr7_4:21989573-21989592 | Msa1145300:five_prime_UTR | 30.0% |
| !!! | CAATCTCTATCTTTTTTTGG+TGG | - | chr7_4:21989576-21989595 | Msa1145300:five_prime_UTR | 30.0% |
| GACAATGCATAATATATGCA+AGG | + | chr7_4:21989624-21989643 | None:intergenic | 30.0% | |
| GATAGAGATTTACATGTTCA+TGG | + | chr7_4:21989646-21989665 | None:intergenic | 30.0% | |
| GCATATGATGTTACAACTGT+AGG | - | chr7_4:21987322-21987341 | Msa1145300:three_prime_UTR | 35.0% | |
| TTATTGAACTTCCAAACCTC+GGG | - | chr7_4:21987375-21987394 | Msa1145300:three_prime_UTR | 35.0% | |
| !!! | TTTTGGTTCAAGAGAATGGA+GGG | + | chr7_4:21987425-21987444 | None:intergenic | 35.0% |
| !!! | ATTTTGGTTCAAGAGAATGG+AGG | + | chr7_4:21987426-21987445 | None:intergenic | 35.0% |
| AAGACAACTTCAGCATAATG+TGG | - | chr7_4:21987568-21987587 | Msa1145300:exon | 35.0% | |
| CATCTGTAGAGGTAGTAAAA+TGG | + | chr7_4:21987602-21987621 | None:intergenic | 35.0% | |
| ! | CATTTTACTACCTCTACAGA+TGG | - | chr7_4:21987600-21987619 | Msa1145300:CDS | 35.0% |
| GCATTAAAGTTGAGATTCTG+AGG | - | chr7_4:21988053-21988072 | Msa1145300:intron | 35.0% | |
| ATTGAATGTTTGACAGGATG+TGG | - | chr7_4:21988089-21988108 | Msa1145300:intron | 35.0% | |
| TTGAATGTTTGACAGGATGT+GGG | - | chr7_4:21988090-21988109 | Msa1145300:intron | 35.0% | |
| GTTCAGTATGAAGCTGAAAT+TGG | - | chr7_4:21988145-21988164 | Msa1145300:intron | 35.0% | |
| AGTATGAAGCTGAAATTGGT+AGG | - | chr7_4:21988149-21988168 | Msa1145300:intron | 35.0% | |
| ! | GTGGAGTGTTAACAAGAATA+GGG | - | chr7_4:21988305-21988324 | Msa1145300:intron | 35.0% |
| ! | TGGAGTGTTAACAAGAATAG+GGG | - | chr7_4:21988306-21988325 | Msa1145300:intron | 35.0% |
| TTGCAGATGTGTACAGAAAA+TGG | - | chr7_4:21988333-21988352 | Msa1145300:intron | 35.0% | |
| ATCACACCTATTCTATTCTC+TGG | - | chr7_4:21988502-21988521 | Msa1145300:CDS | 35.0% | |
| AATGAACTTACACTATCTGG+TGG | + | chr7_4:21988533-21988552 | None:intergenic | 35.0% | |
| ! | GCACATCTTTATGCTTTTGT+CGG | - | chr7_4:21988646-21988665 | Msa1145300:intron | 35.0% |
| TTAAACTAGGTCCACCATAT+TGG | + | chr7_4:21988800-21988819 | None:intergenic | 35.0% | |
| ATGTCATATGGACAGTAACA+AGG | - | chr7_4:21988853-21988872 | Msa1145300:CDS | 35.0% | |
| GTTGCAAATGAATTGGAAAC+AGG | - | chr7_4:21988978-21988997 | Msa1145300:intron | 35.0% | |
| TTGTGGATAGAGTTCCAATA+AGG | - | chr7_4:21989005-21989024 | Msa1145300:intron | 35.0% | |
| TGTGGATAGAGTTCCAATAA+GGG | - | chr7_4:21989006-21989025 | Msa1145300:intron | 35.0% | |
| TTGTTCTTGAACACCCTTAT+TGG | + | chr7_4:21989022-21989041 | None:intergenic | 35.0% | |
| TGTATGGAATGCAGATGATT+GGG | - | chr7_4:21989096-21989115 | Msa1145300:intron | 35.0% | |
| GTGGACTTGAAAAAACAAAC+TGG | - | chr7_4:21989128-21989147 | Msa1145300:intron | 35.0% | |
| TCTTTGTAGGATGACACAAA+TGG | + | chr7_4:21989163-21989182 | None:intergenic | 35.0% | |
| !! | TTAGTGTTGATGCTTGTCAA+TGG | - | chr7_4:21989185-21989204 | Msa1145300:intron | 35.0% |
| !! | TAGTGTTGATGCTTGTCAAT+GGG | - | chr7_4:21989186-21989205 | Msa1145300:intron | 35.0% |
| GTTGTGGTTGAAACACATTT+AGG | + | chr7_4:21989223-21989242 | None:intergenic | 35.0% | |
| CAACCACAACAAAAAATTGG+TGG | - | chr7_4:21989233-21989252 | Msa1145300:intron | 35.0% | |
| !!! | ATCCCACCAATTTTTTGTTG+TGG | + | chr7_4:21989239-21989258 | None:intergenic | 35.0% |
| ! | TCTTTCAGGTGATCAGAAAA+TGG | - | chr7_4:21989276-21989295 | Msa1145300:intron | 35.0% |
| TGCAATAGTCATAGATGACA+AGG | + | chr7_4:21989324-21989343 | None:intergenic | 35.0% | |
| !!! | TCTCTATCTTTTTTTGGTGG+TGG | - | chr7_4:21989579-21989598 | Msa1145300:five_prime_UTR | 35.0% |
| TGCATAATATATGCAAGGTC+CGG | + | chr7_4:21989619-21989638 | None:intergenic | 35.0% | |
| ! | TTTGGGTAGGAGGAGAATTT+TGG | + | chr7_4:21987442-21987461 | None:intergenic | 40.0% |
| AATTCTCCTCCTACCCAAAA+TGG | - | chr7_4:21987443-21987462 | Msa1145300:three_prime_UTR | 40.0% | |
| CTCTCATTAGACAATGACAC+AGG | - | chr7_4:21987636-21987655 | Msa1145300:CDS | 40.0% | |
| ATGAAGCTGAAATTGGTAGG+AGG | - | chr7_4:21988152-21988171 | Msa1145300:intron | 40.0% | |
| CTTGTTAACACTCCACCAAT+TGG | + | chr7_4:21988301-21988320 | None:intergenic | 40.0% | |
| ! | GGTGGAGTGTTAACAAGAAT+AGG | - | chr7_4:21988304-21988323 | Msa1145300:intron | 40.0% |
| ATGTGTACAGAAAATGGTGC+AGG | - | chr7_4:21988339-21988358 | Msa1145300:intron | 40.0% | |
| TGTGTACAGAAAATGGTGCA+GGG | - | chr7_4:21988340-21988359 | Msa1145300:intron | 40.0% | |
| !! | GAGTTTTTGGGAAACAGAAC+AGG | - | chr7_4:21988387-21988406 | Msa1145300:intron | 40.0% |
| AATGTGTACAAGAATGGGAC+AGG | - | chr7_4:21988432-21988451 | Msa1145300:intron | 40.0% | |
| GTGAGATGAGACATATGCTT+TGG | - | chr7_4:21988460-21988479 | Msa1145300:CDS | 40.0% | |
| TAGTGTAGGACAAGATTGTG+AGG | - | chr7_4:21988739-21988758 | Msa1145300:intron | 40.0% | |
| GTGTATGGAATGCAGATGAT+TGG | - | chr7_4:21989095-21989114 | Msa1145300:intron | 40.0% | |
| !!! | TTTTTCAAGTCCACCTCTTG+TGG | + | chr7_4:21989122-21989141 | None:intergenic | 40.0% |
| TATGATGCTTGGCATCTTTC+AGG | - | chr7_4:21989262-21989281 | Msa1145300:intron | 40.0% | |
| TCCATGGGAGTAATGTATCA+TGG | - | chr7_4:21989390-21989409 | Msa1145300:CDS | 40.0% | |
| CCATGGGAGTAATGTATCAT+GGG | - | chr7_4:21989391-21989410 | Msa1145300:CDS | 40.0% | |
| CATGGGAGTAATGTATCATG+GGG | - | chr7_4:21989392-21989411 | Msa1145300:CDS | 40.0% | |
| !!! | TATCTTTTTTTGGTGGTGGC+CGG | - | chr7_4:21989583-21989602 | Msa1145300:five_prime_UTR | 40.0% |
| ATGGAGGGATTCTCTACTTC+TGG | + | chr7_4:21987410-21987429 | None:intergenic | 45.0% | |
| TCCTACCCAAAATGGATGGA+GGG | - | chr7_4:21987451-21987470 | Msa1145300:three_prime_UTR | 45.0% | |
| ! | AAGGACCCTCCATCCATTTT+GGG | + | chr7_4:21987459-21987478 | None:intergenic | 45.0% |
| ! | AAAGGACCCTCCATCCATTT+TGG | + | chr7_4:21987460-21987479 | None:intergenic | 45.0% |
| GGCTGCAAGGAAAAGAAGAA+TGG | + | chr7_4:21987493-21987512 | None:intergenic | 45.0% | |
| AGCAGAAGCAGCTATGTCTA+AGG | - | chr7_4:21987536-21987555 | Msa1145300:three_prime_UTR | 45.0% | |
| GCAGAAGCAGCTATGTCTAA+GGG | - | chr7_4:21987537-21987556 | Msa1145300:three_prime_UTR | 45.0% | |
| TAGGTGTGATAGTCCTCAGT+GGG | + | chr7_4:21988492-21988511 | None:intergenic | 45.0% | |
| ATAGGTGTGATAGTCCTCAG+TGG | + | chr7_4:21988493-21988512 | None:intergenic | 45.0% | |
| GGTGGGATCAATATGATGCT+TGG | - | chr7_4:21989251-21989270 | Msa1145300:intron | 45.0% | |
| !! | AAGAGTGCTCATTGAGTCCA+TGG | - | chr7_4:21989374-21989393 | Msa1145300:CDS | 45.0% |
| ! | AGAGTGCTCATTGAGTCCAT+GGG | - | chr7_4:21989375-21989394 | Msa1145300:CDS | 45.0% |
| CCCATGATACATTACTCCCA+TGG | + | chr7_4:21989394-21989413 | None:intergenic | 45.0% | |
| CCTCGTGATCTTAACTCAGT+TGG | + | chr7_4:21989691-21989710 | None:intergenic | 45.0% | |
| CCAACTGAGTTAAGATCACG+AGG | - | chr7_4:21989688-21989707 | Msa1145300:five_prime_UTR | 45.0% | |
| CTCCTCCTACCCAAAATGGA+TGG | - | chr7_4:21987447-21987466 | Msa1145300:three_prime_UTR | 50.0% | |
| !! | CTCCATCCATTTTGGGTAGG+AGG | + | chr7_4:21987452-21987471 | None:intergenic | 50.0% |
| CTCCTACCCAAAATGGATGG+AGG | - | chr7_4:21987450-21987469 | Msa1145300:three_prime_UTR | 50.0% | |
| !! | ACCCTCCATCCATTTTGGGT+AGG | + | chr7_4:21987455-21987474 | None:intergenic | 50.0% |
| AAGCAGCTACTATGGCTGCA+AGG | + | chr7_4:21987506-21987525 | None:intergenic | 50.0% | |
| CCAGATCTGTCCATCTGTAG+AGG | + | chr7_4:21987613-21987632 | None:intergenic | 50.0% | |
| CCTCTACAGATGGACAGATC+TGG | - | chr7_4:21987610-21987629 | Msa1145300:CDS | 50.0% | |
| TTGGTAGGAGGTGATTCTGC+TGG | - | chr7_4:21988164-21988183 | Msa1145300:intron | 50.0% | |
| !! | GCTTTGGTTTGATCCCACTG+AGG | - | chr7_4:21988476-21988495 | Msa1145300:CDS | 50.0% |
| GAGCACTCTTCAGGCAAAGT+TGG | + | chr7_4:21989364-21989383 | None:intergenic | 50.0% | |
| GGACTCAATGAGCACTCTTC+AGG | + | chr7_4:21989373-21989392 | None:intergenic | 50.0% | |
| GGATCTCTGAACCCGAGGTT+TGG | + | chr7_4:21987389-21987408 | None:intergenic | 55.0% | |
| CTTCTGGATCTCTGAACCCG+AGG | + | chr7_4:21987394-21987413 | None:intergenic | 55.0% | |
| GCAGATGATTGGGCCACAAG+AGG | - | chr7_4:21989106-21989125 | Msa1145300:intron | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | - | chr7_4:21989109-21989128 | Msa1145300:intron | 55.0% | |
| AAGGTCCGGAGTTCGAACAC+CGG | + | chr7_4:21989605-21989624 | None:intergenic | 55.0% | |
| GGTGGCCGGTGTTCGAACTC+CGG | - | chr7_4:21989597-21989616 | Msa1145300:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 21987241 | 21989743 | 21987241 | ID=Msa1145300;Name=Msa1145300 |
| chr7_4 | mRNA | 21987241 | 21989743 | 21987241 | ID=Msa1145300-mRNA-1;Parent=Msa1145300;Name=Msa1145300-mRNA-1;_AED=0.12;_eAED=0.12;_QI=221|1|1|1|1|1|4|341|300 |
| chr7_4 | exon | 21987241 | 21987984 | 21987241 | ID=Msa1145300-mRNA-1:exon:5331;Parent=Msa1145300-mRNA-1 |
| chr7_4 | exon | 21988443 | 21988645 | 21988443 | ID=Msa1145300-mRNA-1:exon:5330;Parent=Msa1145300-mRNA-1 |
| chr7_4 | exon | 21988779 | 21988879 | 21988779 | ID=Msa1145300-mRNA-1:exon:5329;Parent=Msa1145300-mRNA-1 |
| chr7_4 | exon | 21989327 | 21989743 | 21989327 | ID=Msa1145300-mRNA-1:exon:5328;Parent=Msa1145300-mRNA-1 |
| chr7_4 | five_prime_UTR | 21989523 | 21989743 | 21989523 | ID=Msa1145300-mRNA-1:five_prime_utr;Parent=Msa1145300-mRNA-1 |
| chr7_4 | CDS | 21989327 | 21989522 | 21989327 | ID=Msa1145300-mRNA-1:cds;Parent=Msa1145300-mRNA-1 |
| chr7_4 | CDS | 21988779 | 21988879 | 21988779 | ID=Msa1145300-mRNA-1:cds;Parent=Msa1145300-mRNA-1 |
| chr7_4 | CDS | 21988443 | 21988645 | 21988443 | ID=Msa1145300-mRNA-1:cds;Parent=Msa1145300-mRNA-1 |
| chr7_4 | CDS | 21987582 | 21987984 | 21987582 | ID=Msa1145300-mRNA-1:cds;Parent=Msa1145300-mRNA-1 |
| chr7_4 | three_prime_UTR | 21987241 | 21987581 | 21987241 | ID=Msa1145300-mRNA-1:three_prime_utr;Parent=Msa1145300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
