AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0553240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0553240 MtrunA17_Chr4g0038931 96.340 1093 34 3 1 1088 1 1092 0.0 2169
Msa0553240 MtrunA17_Chr7g0257081 41.820 813 406 21 286 1080 455 1218 1.41e-174 545
Msa0553240 MtrunA17_Chr3g0134181 24.672 458 269 8 639 1020 1 458 2.30e-25 111
Msa0553240 MtrunA17_Chr3g0124261 25.195 385 227 12 523 902 223 551 6.32e-21 98.6
Msa0553240 MtrunA17_Chr7g0269861 26.266 316 182 7 750 1020 158 467 1.85e-20 97.1
Msa0553240 MtrunA17_Chr1g0194851 24.769 432 230 10 675 1019 47 470 4.98e-20 95.5
Msa0553240 MtrunA17_Chr2g0316221 26.302 384 221 12 523 897 222 552 7.30e-20 95.5
Msa0553240 MtrunA17_Chr3g0115681 25.840 387 209 14 529 902 198 519 4.74e-18 89.7
Msa0553240 MtrunA17_Chr5g0425741 24.533 428 255 14 529 955 218 578 1.86e-17 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0553240 AT5G12430.1 41.997 1212 511 32 1 1084 7 1154 0.0 788
Msa0553240 AT2G41520.3 48.258 574 284 8 511 1080 440 1004 9.01e-168 521
Msa0553240 AT2G41520.1 48.258 574 284 8 511 1080 540 1104 2.08e-167 523
Msa0553240 AT2G41520.2 45.122 574 271 9 511 1080 540 1073 4.64e-148 471
Msa0553240 AT5G65160.1 26.790 377 221 12 523 897 237 560 6.22e-22 102
Msa0553240 AT1G02650.2 24.887 442 263 9 647 1024 5 441 1.70e-21 100
Msa0553240 AT1G02650.1 24.658 438 261 9 651 1024 12 444 4.45e-21 99.0
Msa0553240 AT3G62570.1 30.508 236 148 5 796 1019 233 464 3.38e-20 96.3
Msa0553240 AT2G47440.2 23.958 480 280 11 650 1056 8 475 1.66e-19 94.0
Msa0553240 AT2G47440.1 23.899 477 278 11 653 1056 22 486 5.25e-19 92.4
Msa0553240 AT5G10090.1 26.984 378 219 13 523 897 238 561 6.95e-19 92.4
Msa0553240 AT4G02100.1 23.542 463 253 13 651 1023 15 466 2.47e-18 90.5
Msa0553240 AT3G58620.1 25.310 403 231 13 529 911 218 570 2.58e-18 90.9
Msa0553240 AT3G58620.2 25.310 403 231 13 529 911 218 570 3.66e-18 90.5
Msa0553240 AT1G53300.1 25.333 375 231 11 529 902 234 560 8.74e-17 86.3
Msa0553240 AT1G78120.1 24.471 425 255 11 481 902 128 489 5.78e-16 82.8
Msa0553240 AT1G78120.2 24.574 411 244 11 481 888 128 475 1.15e-14 78.6
Msa0553240 AT3G14950.1 25.067 375 230 11 529 901 265 590 1.24e-14 79.3

Find 279 sgRNAs with CRISPR-Local

Find 648 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAGGCTATTCAAAATAAT+TGG 0.145507 4_1:-50176796 Msa0553240:CDS
TACTTCCAGGGCGTCGCTTT+TGG 0.165807 4_1:+50176320 None:intergenic
GCCTCTTCCGCCTCCGTTTC+CGG 0.195345 4_1:-50184425 Msa0553240:CDS
ACAAAGGATGAGTCGGTTTC+TGG 0.201904 4_1:-50183378 Msa0553240:CDS
ATCAGATGGTCCTTTATAAT+TGG 0.219032 4_1:+50178186 None:intergenic
CTCCGAGATGCTTGTTCTTT+AGG 0.229553 4_1:+50182438 None:intergenic
TAGTAATGATTACTTGTTTA+TGG 0.232058 4_1:+50180253 None:intergenic
GTGCCATTTGCAACTCTTAC+TGG 0.234225 4_1:-50183084 Msa0553240:CDS
GCAGAAGAATTACATAAATT+AGG 0.244300 4_1:+50183978 None:intergenic
TCTTGATGGGAATTATTTAA+AGG 0.244695 4_1:-50178640 Msa0553240:intron
CAACCCAAAACAAGGGTTTC+TGG 0.248704 4_1:-50183009 Msa0553240:CDS
TGAATGAGGATCACAAATTA+AGG 0.248894 4_1:-50182984 Msa0553240:CDS
AATGGAGGTTTCTCCTTATC+AGG 0.256808 4_1:-50183634 Msa0553240:CDS
TGGTCAATGTTTCGGGTTGC+TGG 0.261346 4_1:-50175926 Msa0553240:three_prime_UTR
ACTAAGCTGGTCAATGTTTC+GGG 0.268528 4_1:-50175933 Msa0553240:three_prime_UTR
TTTAAGTTGTTATCTTGCTC+TGG 0.272032 4_1:-50181771 Msa0553240:intron
AACTAAGCTGGTCAATGTTT+CGG 0.281974 4_1:-50175934 Msa0553240:three_prime_UTR
GGTGATAGAATGTTGAATTT+TGG 0.283457 4_1:-50183279 Msa0553240:CDS
AAAGCGACGCCCTGGAAGTA+TGG 0.283849 4_1:-50176317 Msa0553240:CDS
TCCATTGATCGTCGTTTAAT+CGG 0.286268 4_1:+50184512 None:intergenic
CACACCAGAAACCCTTGTTT+TGG 0.288839 4_1:+50183005 None:intergenic
AAATATATAAATACCTTTGC+AGG 0.293330 4_1:+50176748 None:intergenic
CAATGATTGAAAATTGAAAA+TGG 0.298530 4_1:+50184572 None:intergenic
GCGATATTGTTTCAAATCAT+TGG 0.315585 4_1:+50178147 None:intergenic
CAGGAGTGGAAGCAAGGTTT+TGG 0.317100 4_1:-50180115 Msa0553240:CDS
AAATTCGATCCCGAAGCTTC+TGG 0.318865 4_1:+50183867 None:intergenic
ATGCCATCCTCGTCAGGTTT+AGG 0.322076 4_1:-50183954 Msa0553240:CDS
TGAAGAGGGTCTTTCTTTGC+TGG 0.322407 4_1:-50180300 Msa0553240:CDS
ATGTTAATCCAGTTAGGTTC+TGG 0.327451 4_1:-50176158 Msa0553240:three_prime_UTR
GGAGACATTGGAGAGAGGTT+TGG 0.331020 4_1:-50176240 Msa0553240:CDS
CCTGAGATCACTGGCTGCTT+GGG 0.334096 4_1:+50178249 None:intergenic
TCCGATTAAACGACGATCAA+TGG 0.334698 4_1:-50184513 Msa0553240:exon
TCTTGCCCTGACACAATATT+AGG 0.338054 4_1:+50183057 None:intergenic
TTATTTCTACCCATACTTCC+AGG 0.342358 4_1:+50176307 None:intergenic
AAGCATCTCGGAGCTGTCTC+AGG 0.350309 4_1:-50182428 Msa0553240:CDS
TCCTCGTCAGGTTTAGGTTC+GGG 0.352923 4_1:-50183948 Msa0553240:CDS
CAGCTTGCTCATCATTGCTT+CGG 0.355197 4_1:+50184202 None:intergenic
GGAAAATTGAAGGAGAAAAG+TGG 0.357671 4_1:-50183801 Msa0553240:CDS
GCCGGAAACGGAGGCGGAAG+AGG 0.360814 4_1:+50184424 None:intergenic
ATTCGGCAAATTCCGTTATT+CGG 0.362424 4_1:-50184070 Msa0553240:CDS
GAATAAGGAACCTTTATGTT+TGG 0.362710 4_1:+50183117 None:intergenic
CTCTCTCCAATGTCTCCTAT+TGG 0.364221 4_1:+50176246 None:intergenic
ATAGGCTATTCAAAATAATT+GGG 0.365101 4_1:-50176795 Msa0553240:CDS
CACATTGATGAAGATTTGAT+TGG 0.369807 4_1:-50183510 Msa0553240:CDS
CAAAGCCGAATCAACCTTAT+CGG 0.374414 4_1:+50184301 None:intergenic
TGATCCTTCTTAACTTCAAA+AGG 0.377866 4_1:+50183909 None:intergenic
GGCACAGATGGGGATGAATA+AGG 0.378209 4_1:+50183102 None:intergenic
GAAACCAAGCCTACAAGAAC+GGG 0.378362 4_1:-50182509 Msa0553240:CDS
TGCAGGGAATGAAGCATATC+AGG 0.379018 4_1:-50178823 Msa0553240:CDS
TCCAACTGACATGTCATTAC+AGG 0.379073 4_1:+50175959 None:intergenic
ATCCTCGTCAGGTTTAGGTT+CGG 0.379602 4_1:-50183949 Msa0553240:CDS
CAACTCCATGCTCAAATTAT+CGG 0.381031 4_1:+50175825 None:intergenic
ACTGCAATCCAGAACCTAAC+TGG 0.382867 4_1:+50176150 None:intergenic
CAAGAACGGGGATTTGTCTA+TGG 0.383050 4_1:-50182496 Msa0553240:CDS
TTCAAAATGTGCTTGCAATC+AGG 0.383114 4_1:-50181722 Msa0553240:CDS
TCGTGGAATGTGACCTTGTT+AGG 0.383790 4_1:-50176116 Msa0553240:three_prime_UTR
CTATCATCGCCGGAGTTTAA+CGG 0.385650 4_1:+50184488 None:intergenic
TTTACTTTACTGCAAAAGTT+TGG 0.387846 4_1:+50176059 None:intergenic
CAACTTTGTTACTTCCTACT+TGG 0.388989 4_1:+50176187 None:intergenic
GAGGATAATGCCAATTATAA+AGG 0.392946 4_1:-50178196 Msa0553240:CDS
TCCTGAGATCACTGGCTGCT+TGG 0.398045 4_1:+50178248 None:intergenic
ACCATGGAGATGATGGGATA+TGG 0.398225 4_1:-50176852 Msa0553240:CDS
TCAGAGTAAACCAGAAGCTT+CGG 0.404913 4_1:-50183877 Msa0553240:CDS
AGACAAATCCCCGTTCTTGT+AGG 0.409824 4_1:+50182500 None:intergenic
CAGAGTAAACCAGAAGCTTC+GGG 0.410135 4_1:-50183876 Msa0553240:CDS
GCGAAATCGGAGTGTGGTAT+AGG 0.410329 4_1:-50183426 Msa0553240:CDS
TCTGCAATGCCATCCTCGTC+AGG 0.411631 4_1:-50183960 Msa0553240:CDS
ACATTGATGAAGATTTGATT+GGG 0.412194 4_1:-50183509 Msa0553240:CDS
AGCTTGCTCATCATTGCTTC+GGG 0.412250 4_1:+50184203 None:intergenic
CATGGAATGTTAATCCAGTT+AGG 0.412944 4_1:-50176164 Msa0553240:three_prime_UTR
GGGAAGCCTAATATTGTGTC+AGG 0.415730 4_1:-50183063 Msa0553240:CDS
AATGAAAGTGTGCGTGGGTC+TGG 0.417588 4_1:-50183249 Msa0553240:CDS
ATTATTCAATTGCCGAATAA+CGG 0.421949 4_1:+50184058 None:intergenic
TGGTTGCCAAGTCACATATA+TGG 0.423062 4_1:-50180408 Msa0553240:CDS
CAACTACGCGCCAAACATAA+AGG 0.423479 4_1:-50183127 Msa0553240:CDS
ATTTGAAACAATATCGCATT+CGG 0.427897 4_1:-50178141 Msa0553240:CDS
GAGATGCAATAGAAGATTGT+AGG 0.430809 4_1:-50182347 Msa0553240:CDS
AAATCGCATGGGCCGAAGAT+TGG 0.430863 4_1:-50183834 Msa0553240:CDS
TCATACGGTAATTCTGAAAC+TGG 0.435111 4_1:-50176214 Msa0553240:CDS
AAGTTGTCTACTTCAGACTA+TGG 0.436587 4_1:-50180367 Msa0553240:CDS
CAAAGGATGAGTCGGTTTCT+GGG 0.437326 4_1:-50183377 Msa0553240:CDS
AAAATCGGAACCGAGGGTTT+CGG 0.437787 4_1:-50184239 Msa0553240:CDS
AGTTGCGAGGGAAGATAGAA+AGG 0.439409 4_1:-50183451 Msa0553240:CDS
AGATAGAAAGGAGGCGAAAT+CGG 0.439736 4_1:-50183439 Msa0553240:CDS
TTCGTGTTGAATCGGAGCTT+GGG 0.442909 4_1:-50184151 Msa0553240:CDS
GCACCTGTGCAAGGTTGGAA+TGG 0.445586 4_1:-50183729 Msa0553240:CDS
ACTTGGCAACCAGCAGCAAT+TGG 0.445982 4_1:+50180419 None:intergenic
AATCCCCGTTCTTGTAGGCT+TGG 0.446039 4_1:+50182505 None:intergenic
ACTTCTCTCTCTTCTCAGTA+AGG 0.448430 4_1:-50178224 Msa0553240:CDS
CATGTGAAAAGTGGCGCCTC+CGG 0.451704 4_1:-50182933 Msa0553240:intron
AGGTAACAATGTAGAGGATT+CGG 0.453417 4_1:-50184087 Msa0553240:CDS
TGATAAGGTTCGTGTTGAAT+CGG 0.453835 4_1:-50184159 Msa0553240:CDS
CGGTTGAAGAATCTCAAAAT+CGG 0.454170 4_1:-50184254 Msa0553240:CDS
TGAGAGTAGTGAAGTTGCGA+GGG 0.454869 4_1:-50183463 Msa0553240:CDS
CTTTACTGCAAAAGTTTGGC+AGG 0.457532 4_1:+50176063 None:intergenic
TCTGTCTTCTTCCTCTAGCT+CGG 0.459822 4_1:+50178114 None:intergenic
ATGGAGTTGGTGTGTTGACT+TGG 0.463514 4_1:-50175811 Msa0553240:three_prime_UTR
TTAAGTTGTTATCTTGCTCT+GGG 0.465565 4_1:-50181770 Msa0553240:intron
CACCTGTGCAAGGTTGGAAT+GGG 0.465817 4_1:-50183728 Msa0553240:CDS
GTTCGTGTTGAATCGGAGCT+TGG 0.467931 4_1:-50184152 Msa0553240:CDS
TGACATGTCATTACAGGAAT+GGG 0.470813 4_1:+50175965 None:intergenic
CACCGGCACCTGTGCAAGGT+TGG 0.471355 4_1:-50183734 Msa0553240:CDS
AGGATCCGATAAGGTTGATT+CGG 0.474499 4_1:-50184306 Msa0553240:CDS
CCCAAGCAGCCAGTGATCTC+AGG 0.474639 4_1:-50178249 Msa0553240:CDS
AAGCTTTCCTAGGTGAAAGT+AGG 0.475153 4_1:+50180322 None:intergenic
TGCCATTTGCAACTCTTACT+GGG 0.485285 4_1:-50183083 Msa0553240:CDS
AATGCTTGTCCAATTGCTGC+TGG 0.485361 4_1:-50180428 Msa0553240:CDS
TTCCAACCTTGCACAGGTGC+CGG 0.485423 4_1:+50183732 None:intergenic
GCTCATCTGAACAATCCAAT+AGG 0.486083 4_1:-50176261 Msa0553240:CDS
TTTGTTGAGTTTAAATCGCA+TGG 0.487555 4_1:-50183846 Msa0553240:CDS
CGGCTTGGAAAGGCCGGAAA+CGG 0.491585 4_1:+50184412 None:intergenic
GCCGCTGCATATAAAGTGTT+AGG 0.491729 4_1:-50178705 Msa0553240:CDS
ATACCTTTGCAGGGTCTGAC+AGG 0.491737 4_1:+50176758 None:intergenic
GTGTGAGAGTTGTTCGCCAA+TGG 0.492409 4_1:-50183652 Msa0553240:CDS
GGTCAATGTTTCGGGTTGCT+GGG 0.492451 4_1:-50175925 Msa0553240:three_prime_UTR
AGCAGAAGAAGCAGCTGCAA+AGG 0.492619 4_1:+50183221 None:intergenic
CAATAACAGACAGCTGCAAA+TGG 0.494893 4_1:+50178735 None:intergenic
CTCTGATGCAGAGAGGGCAT+TGG 0.495323 4_1:-50180799 Msa0553240:CDS
TACGACGGTTACGGCGGCAT+TGG 0.497534 4_1:+50184328 None:intergenic
AATTCCCAAAAGCGACGCCC+TGG 0.502156 4_1:-50176325 Msa0553240:CDS
AGAGTTGCAAATGGCACAGA+TGG 0.502299 4_1:+50183090 None:intergenic
TCCTTGCAGGAGTGGAAGCA+AGG 0.502626 4_1:-50180121 Msa0553240:intron
CCGAAGATTGGTGGAAAAGA+AGG 0.502870 4_1:-50183822 Msa0553240:CDS
TGGAAAAGAAGGAAAATTGA+AGG 0.503958 4_1:-50183811 Msa0553240:CDS
ACGCGAGCTCTTGCATCATA+AGG 0.504903 4_1:-50180064 Msa0553240:intron
GAAAATTGAAGGAGAAAAGT+GGG 0.505042 4_1:-50183800 Msa0553240:CDS
GCTGGAACAACAAGAAGAAA+AGG 0.509166 4_1:-50180282 Msa0553240:CDS
TCGCATGGGCCGAAGATTGG+TGG 0.510127 4_1:-50183831 Msa0553240:CDS
AAGCTTCACGAAACGCGGCT+TGG 0.510475 4_1:+50184397 None:intergenic
CTGACATGTCATTACAGGAA+TGG 0.511281 4_1:+50175964 None:intergenic
CTTCTCTCTCTTCTCAGTAA+GGG 0.511417 4_1:-50178223 Msa0553240:CDS
GACCCTCTTCAAGCTTTCCT+AGG 0.513761 4_1:+50180312 None:intergenic
GAAACGCGGCTTGGAAAGGC+CGG 0.514192 4_1:+50184406 None:intergenic
TTTGCAAGAAGATCGTCCTC+AGG 0.515093 4_1:-50183679 Msa0553240:CDS
ATTTCAGATATTGAAACAGA+TGG 0.515857 4_1:+50177024 None:intergenic
TGCAATCGCAGATTGCAGTC+TGG 0.517495 4_1:-50178670 Msa0553240:CDS
GCTGCCACACACATGTCTCT+TGG 0.517920 4_1:-50182378 Msa0553240:CDS
GAGGCGGTTGTGAAGGTGAA+AGG 0.520153 4_1:+50184443 None:intergenic
GGAAAGGCCGGAAACGGAGG+CGG 0.521555 4_1:+50184418 None:intergenic
AGCCTCCGATGGCTTACAAA+AGG 0.521703 4_1:-50181663 Msa0553240:CDS
CAACATTCTATCACCATCAC+GGG 0.521812 4_1:+50183287 None:intergenic
ATCGGATCCTACGACGGTTA+CGG 0.522028 4_1:+50184319 None:intergenic
GGAAACCAAGCCTACAAGAA+CGG 0.523034 4_1:-50182510 Msa0553240:CDS
TCCTGTAATGACATGTCAGT+TGG 0.525143 4_1:-50175960 Msa0553240:three_prime_UTR
CTTAAAGCCTACTTTCACCT+AGG 0.525307 4_1:-50180329 Msa0553240:CDS
GGCGGAAGAGGCGGTTGTGA+AGG 0.525563 4_1:+50184436 None:intergenic
ATTGACATTCATAACCATTG+AGG 0.525681 4_1:+50175588 None:intergenic
CTGCCGAAGCATGTGAAAAG+TGG 0.526842 4_1:-50182942 Msa0553240:CDS
TGCAGTATAAGTCGTGGTCG+TGG 0.527119 4_1:-50176133 Msa0553240:three_prime_UTR
AACAATCCAATAGGAGACAT+TGG 0.529616 4_1:-50176252 Msa0553240:CDS
AAGCTGAATATTTCAACGGA+AGG 0.529714 4_1:-50184185 Msa0553240:CDS
GGTACCGTCGCGATTGAAAA+CGG 0.532608 4_1:+50184355 None:intergenic
GTTCAAAATTCTGATCAACT+AGG 0.534777 4_1:+50184000 None:intergenic
CAATGCCCTCTCTGCATCAG+AGG 0.535640 4_1:+50180800 None:intergenic
AAGTACATAGAGATGCTGAT+AGG 0.536049 4_1:-50176813 Msa0553240:CDS
AGTCTGGCTATAGCTCTTGA+TGG 0.536135 4_1:-50178654 Msa0553240:CDS
GCTAGAGGAAGAAGACAGAA+AGG 0.536318 4_1:-50178110 Msa0553240:CDS
GTCAACACGAAGTGACTCAT+TGG 0.536975 4_1:+50183566 None:intergenic
GGCTTCAGATTCAGCATCAT+CGG 0.537253 4_1:+50183308 None:intergenic
TCACGAAACGCGGCTTGGAA+AGG 0.537722 4_1:+50184402 None:intergenic
AAGAAAACTTGGGTAAATGT+TGG 0.537757 4_1:-50183162 Msa0553240:CDS
CGATGGCTTACAAAAGGCAC+AGG 0.538477 4_1:-50181657 Msa0553240:intron
AAGCGACGCCCTGGAAGTAT+GGG 0.538802 4_1:-50176316 Msa0553240:CDS
GAGACATGTGTGTGGCAGCC+AGG 0.540507 4_1:+50182382 None:intergenic
TGTAATTACAATCGTTATCG+TGG 0.541768 4_1:+50175646 None:intergenic
GTCAGTTGGAGCAACTAAGC+TGG 0.543139 4_1:-50175946 Msa0553240:three_prime_UTR
CTCAGCATTGGAGAAAATGA+AGG 0.543432 4_1:-50184110 Msa0553240:CDS
ATGAGAGTAGTGAAGTTGCG+AGG 0.545234 4_1:-50183464 Msa0553240:CDS
GAGAAGTCTCCTGAGATCAC+TGG 0.546177 4_1:+50178240 None:intergenic
AAGGGTTTCTGGTGTGAATG+AGG 0.546759 4_1:-50182998 Msa0553240:CDS
TTCTCTCTCTTCTCAGTAAG+GGG 0.550070 4_1:-50178222 Msa0553240:CDS
TGATAACCAAGCTTGTGAAA+AGG 0.550630 4_1:-50175787 Msa0553240:three_prime_UTR
AGGTGAAAATATTTGTGTTG+AGG 0.550783 4_1:-50183406 Msa0553240:CDS
AACCGTCGTAGGATCCGATA+AGG 0.550832 4_1:-50184315 Msa0553240:CDS
TTGAAGAAGAAACTCAGCAT+TGG 0.552862 4_1:-50184122 Msa0553240:CDS
CGATAATTTGAGCATGGAGT+TGG 0.554503 4_1:-50175824 Msa0553240:three_prime_UTR
TTGATAAACGGATCAGTGAT+CGG 0.555201 4_1:-50184274 Msa0553240:CDS
TTCAATATCTGAAATCAAGA+AGG 0.555390 4_1:-50177016 Msa0553240:CDS
GAATGAGGATCACAAATTAA+GGG 0.556980 4_1:-50182983 Msa0553240:CDS
GGGAATGAAGCATATCAGGC+TGG 0.559205 4_1:-50178819 Msa0553240:CDS
TGAGAGTTGTTCGCCAATGG+AGG 0.561415 4_1:-50183649 Msa0553240:CDS
TGCCCATTCCAACCTTGCAC+AGG 0.561496 4_1:+50183726 None:intergenic
AACATCCTCTGATGCAGAGA+GGG 0.562027 4_1:-50180805 Msa0553240:CDS
GAGTTGCAAATGGCACAGAT+GGG 0.562234 4_1:+50183091 None:intergenic
CTTGGAAAGGCCGGAAACGG+AGG 0.562328 4_1:+50184415 None:intergenic
GTCTGGCTATAGCTCTTGAT+GGG 0.562618 4_1:-50178653 Msa0553240:CDS
AAATATCCATATATGTGACT+TGG 0.562685 4_1:+50180402 None:intergenic
AGTTATTACAAACAAGGACT+TGG 0.563253 4_1:-50182468 Msa0553240:CDS
ATATCAGCTGAGTAGATATG+AGG 0.567424 4_1:-50180495 Msa0553240:intron
TGCAATAGAAGATTGTAGGC+TGG 0.568554 4_1:-50182343 Msa0553240:CDS
TTGTGTTGAGGAAGAGACAA+AGG 0.569364 4_1:-50183394 Msa0553240:CDS
TTCCCAGTAAGAGTTGCAAA+TGG 0.569390 4_1:+50183081 None:intergenic
CATTGATGAAGATTTGATTG+GGG 0.570863 4_1:-50183508 Msa0553240:CDS
AGAGAGGTTTGGAGATCATA+CGG 0.570930 4_1:-50176229 Msa0553240:CDS
CCACACACATGTCTCTTGGT+AGG 0.571548 4_1:-50182374 Msa0553240:CDS
TTGTTGAGTTTAAATCGCAT+GGG 0.572718 4_1:-50183845 Msa0553240:CDS
GGAAACGGAGGCGGAAGAGG+CGG 0.572756 4_1:+50184427 None:intergenic
ATTAAAAGCACCACCTAACA+AGG 0.572987 4_1:+50176103 None:intergenic
TAATTAATTGATCTATCAGA+TGG 0.573436 4_1:+50178172 None:intergenic
GCTGCTATGTTATAGCAACC+TGG 0.576057 4_1:-50182400 Msa0553240:CDS
GGGTTGAGGAAAAGACACTC+TGG 0.577346 4_1:+50183026 None:intergenic
TATTTCTACCCATACTTCCA+GGG 0.577896 4_1:+50176308 None:intergenic
ACCTAACACTTTATATGCAG+CGG 0.579137 4_1:+50178704 None:intergenic
AGCTGAGAGTCGAACATCAA+GGG 0.579531 4_1:-50183604 Msa0553240:CDS
TACCTAAAGAACAAGCATCT+CGG 0.582598 4_1:-50182440 Msa0553240:CDS
GAAAGGTGACGTGGAAGCGT+CGG 0.584101 4_1:+50184460 None:intergenic
AATATATAAATACCTTTGCA+GGG 0.584168 4_1:+50176749 None:intergenic
GGCATTGGAACATATTAATG+AGG 0.584362 4_1:-50180784 Msa0553240:CDS
AAAATAATATACATATCAAG+AGG 0.584564 4_1:+50178082 None:intergenic
TCCATATCCCATCATCTCCA+TGG 0.585575 4_1:+50176851 None:intergenic
ATGTGATCAACAAAATTCAT+CGG 0.586245 4_1:+50183528 None:intergenic
GGTTACGGCGGCATTGGCGA+CGG 0.588230 4_1:+50184334 None:intergenic
AAAGGATGAGTCGGTTTCTG+GGG 0.588837 4_1:-50183376 Msa0553240:CDS
GTCGGAGAATCTATCATCGC+CGG 0.589518 4_1:+50184478 None:intergenic
CACACCTCTTCAAAACTCAA+AGG 0.590346 4_1:+50175997 None:intergenic
AGCATCTCGGAGCTGTCTCA+GGG 0.592481 4_1:-50182427 Msa0553240:CDS
TAGGAAGTAACAAAGTTGCA+TGG 0.592715 4_1:-50176182 Msa0553240:exon
CTGAAACTGGTCGACCAAGT+AGG 0.596019 4_1:-50176201 Msa0553240:CDS
TTGCGAAGCTTCACGAAACG+CGG 0.596788 4_1:+50184392 None:intergenic
GCTGACCGATAATTTGAGCA+TGG 0.597584 4_1:-50175830 Msa0553240:three_prime_UTR
TCTACACCGGCACCTGTGCA+AGG 0.597868 4_1:-50183738 Msa0553240:CDS
TGATAAGGAGAAACCTCCAT+TGG 0.600623 4_1:+50183636 None:intergenic
ATTTCAGTGGAAGCCTCCGA+TGG 0.601375 4_1:-50181674 Msa0553240:CDS
CACCTAGGAAAGCTTGAAGA+GGG 0.602244 4_1:-50180314 Msa0553240:CDS
TTGCAAGAAGATCGTCCTCA+GGG 0.603300 4_1:-50183678 Msa0553240:CDS
GGAAGAGACAAAGGATGAGT+CGG 0.606925 4_1:-50183385 Msa0553240:CDS
TAGCTGAGAGTCGAACATCA+AGG 0.607839 4_1:-50183605 Msa0553240:CDS
TGTAGATCGTAAGATTTCAG+TGG 0.610390 4_1:-50181687 Msa0553240:CDS
GTGCAAGGTTGGAATGGGCA+TGG 0.610497 4_1:-50183723 Msa0553240:CDS
TGAAGGAGGTAACAATGTAG+AGG 0.611322 4_1:-50184093 Msa0553240:CDS
ATGCAAGAGCTCGCGTACAG+TGG 0.611348 4_1:+50180071 None:intergenic
CATTCGGCTCTCCGAGCTAG+AGG 0.616338 4_1:-50178125 Msa0553240:CDS
TCAACATTCTATCACCATCA+CGG 0.617184 4_1:+50183286 None:intergenic
TCACCTAGGAAAGCTTGAAG+AGG 0.618307 4_1:-50180315 Msa0553240:CDS
AATCTCAAAATCGGAACCGA+GGG 0.619271 4_1:-50184245 Msa0553240:CDS
AATGCCGCCGTAACCGTCGT+AGG 0.621229 4_1:-50184326 Msa0553240:CDS
GATATGGAAGGTTATTGCTG+AGG 0.623714 4_1:-50176836 Msa0553240:CDS
AAATAATATACATATCAAGA+GGG 0.625115 4_1:+50178083 None:intergenic
GAGCAAGCTGAATATTTCAA+CGG 0.627082 4_1:-50184189 Msa0553240:CDS
AACCTTATCGGATCCTACGA+CGG 0.627192 4_1:+50184313 None:intergenic
CGCAGCGTTACCGAAACCCT+CGG 0.627535 4_1:+50184229 None:intergenic
GCTATTCAAAATAATTGGGG+AGG 0.627867 4_1:-50176791 Msa0553240:CDS
GAACCTAAACCTGACGAGGA+TGG 0.628333 4_1:+50183951 None:intergenic
TGGAGATGATGGGATATGGA+AGG 0.631834 4_1:-50176848 Msa0553240:CDS
GAATCTCAAAATCGGAACCG+AGG 0.632281 4_1:-50184246 Msa0553240:CDS
TAGGCTATTCAAAATAATTG+GGG 0.632944 4_1:-50176794 Msa0553240:CDS
TAAGTCTGCTAGTGATAGTG+TGG 0.634648 4_1:-50183337 Msa0553240:CDS
AAAATGACCATGGAGATGAT+GGG 0.634653 4_1:-50176858 Msa0553240:CDS
CTGGATTGCAGTATAAGTCG+TGG 0.636916 4_1:-50176139 Msa0553240:three_prime_UTR
TCTCTCTCTTCTCAGTAAGG+GGG 0.637236 4_1:-50178221 Msa0553240:CDS
CGAGAAATGAAAGTGTGCGT+GGG 0.640629 4_1:-50183254 Msa0553240:CDS
TGCGAGGGAAGATAGAAAGG+AGG 0.643409 4_1:-50183448 Msa0553240:CDS
CAATAGGAGACATTGGAGAG+AGG 0.645163 4_1:-50176245 Msa0553240:CDS
TGTCCTGTCAGACCCTGCAA+AGG 0.649095 4_1:-50176761 Msa0553240:intron
TCGCGTACAGTGGCAGCTAG+TGG 0.650839 4_1:+50180081 None:intergenic
AGTTGCAAATGGCACAGATG+GGG 0.654615 4_1:+50183092 None:intergenic
ACGAGAAATGAAAGTGTGCG+TGG 0.658458 4_1:-50183255 Msa0553240:CDS
GAATTTGAAGCATTCTACAC+CGG 0.659013 4_1:-50183751 Msa0553240:CDS
TGGAATGTGACCTTGTTAGG+TGG 0.659524 4_1:-50176113 Msa0553240:three_prime_UTR
TCAGCTGAGTAGATATGAGG+AGG 0.669038 4_1:-50180492 Msa0553240:intron
GGAAGCCTAATATTGTGTCA+GGG 0.670050 4_1:-50183062 Msa0553240:CDS
AGCATTGGAGAAAATGAAGG+AGG 0.671092 4_1:-50184107 Msa0553240:CDS
AAGGAGGCGAAATCGGAGTG+TGG 0.671553 4_1:-50183432 Msa0553240:CDS
ACTTAGACATCATCCTGACA+AGG 0.674844 4_1:-50176977 Msa0553240:intron
ACCCGAACCTAAACCTGACG+AGG 0.675806 4_1:+50183947 None:intergenic
TTGTCTACTTCAGACTATGG+AGG 0.675887 4_1:-50180364 Msa0553240:CDS
TGAGGATCACAAATTAAGGG+AGG 0.676897 4_1:-50182980 Msa0553240:CDS
AAGTATGGGTAGAAATAATG+CGG 0.682140 4_1:-50176302 Msa0553240:CDS
GCTGAGAGTTATTACAAACA+AGG 0.682479 4_1:-50182474 Msa0553240:CDS
TCAATGGAACCGTTAAACTC+CGG 0.684570 4_1:-50184497 Msa0553240:CDS
CAACTCTCACACGAACCCTG+AGG 0.690580 4_1:+50183663 None:intergenic
GAACATCCTCTGATGCAGAG+AGG 0.691498 4_1:-50180806 Msa0553240:CDS
GCTGAATCTGAAGCCCGTGA+TGG 0.694383 4_1:-50183300 Msa0553240:CDS
TTGACAAGATAAAGACAACA+TGG 0.696793 4_1:-50175886 Msa0553240:three_prime_UTR
TGTGAAGGTGAAAGGTGACG+TGG 0.726310 4_1:+50184451 None:intergenic
GGATCCTACGACGGTTACGG+CGG 0.732365 4_1:+50184322 None:intergenic
ACCGTCGCGATTGAAAACGG+AGG 0.751567 4_1:+50184358 None:intergenic
AAACCAAGCCTACAAGAACG+GGG 0.755398 4_1:-50182508 Msa0553240:CDS
CCTACCAAGAGACATGTGTG+TGG 0.764869 4_1:+50182374 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTAAAACCTTTTTTA+TGG + chr4_1:50178763-50178782 None:intergenic 10.0%
!!! ATAAAAAAGGTTTTAAAAAA+TGG - chr4_1:50178762-50178781 Msa0553240:CDS 10.0%
!! GAAATAATTTATACTAAAAA+TGG + chr4_1:50178939-50178958 None:intergenic 10.0%
!! TTTATAAAATTATTGGAAAT+TGG - chr4_1:50179063-50179082 Msa0553240:intron 10.0%
!!! AATTTTACATTATTCATTTA+AGG - chr4_1:50183121-50183140 Msa0553240:CDS 10.0%
!!! AACATTTTATTTTATTATGT+AGG - chr4_1:50183308-50183327 Msa0553240:CDS 10.0%
!!! AAATATAGTTTCTTTGATTT+TGG - chr4_1:50177607-50177626 Msa0553240:intron 15.0%
!!! CTTTAGGTTTATAAAATTAT+TGG - chr4_1:50179056-50179075 Msa0553240:intron 15.0%
!!! GTTTATTAGACTTTAAAAAT+GGG - chr4_1:50180378-50180397 Msa0553240:CDS 15.0%
!!! TTAATTTTACAAATTCAAAC+AGG + chr4_1:50180518-50180537 None:intergenic 15.0%
!! TTTGTAAAATTAAATAAAGC+CGG - chr4_1:50180525-50180544 Msa0553240:intron 15.0%
!! AAATAATATACATATCAAGA+GGG + chr4_1:50182127-50182146 None:intergenic 15.0%
!! AAAATAATATACATATCAAG+AGG + chr4_1:50182128-50182147 None:intergenic 15.0%
!!! CTTTTTTTTACTGTAATTTT+TGG + chr4_1:50182496-50182515 None:intergenic 15.0%
!!! TTAAATTTTCTTTAAATCTG+TGG - chr4_1:50182625-50182644 Msa0553240:intron 15.0%
!! TCAACTAAAAATAATACATT+TGG - chr4_1:50182852-50182871 Msa0553240:intron 15.0%
!! CAACTAAAAATAATACATTT+GGG - chr4_1:50182853-50182872 Msa0553240:intron 15.0%
!! TTATATATTTCCAAATAACA+AGG - chr4_1:50183472-50183491 Msa0553240:CDS 15.0%
!! CAATGATTGAAAATTGAAAA+TGG + chr4_1:50175638-50175657 None:intergenic 20.0%
!!! TATAATAAAAGTATACTCAC+CGG + chr4_1:50177296-50177315 None:intergenic 20.0%
!! AAATGAATAGATTAATGAGT+TGG - chr4_1:50177420-50177439 Msa0553240:intron 20.0%
!!! AATAGATCAAAATTTTCTCA+AGG - chr4_1:50177894-50177913 Msa0553240:intron 20.0%
!! ATCAAATAAAGGGAAATAAT+GGG + chr4_1:50178124-50178143 None:intergenic 20.0%
!! TGGATAAAACATCAAATAAA+GGG + chr4_1:50178134-50178153 None:intergenic 20.0%
!! ATGGATAAAACATCAAATAA+AGG + chr4_1:50178135-50178154 None:intergenic 20.0%
!! CATATCTTTGAATAATAGTT+AGG + chr4_1:50178276-50178295 None:intergenic 20.0%
!! CTAACTATTATTCAAAGATA+TGG - chr4_1:50178274-50178293 Msa0553240:CDS 20.0%
!!! ATTGATAACTTGATATATCA+TGG - chr4_1:50178597-50178616 Msa0553240:intron 20.0%
!! TGATATTATATCTGAAAACA+TGG - chr4_1:50179028-50179047 Msa0553240:intron 20.0%
!!! AATTTTATAAACCTAAAGCA+GGG + chr4_1:50179054-50179073 None:intergenic 20.0%
!!! TAATTTTATAAACCTAAAGC+AGG + chr4_1:50179055-50179074 None:intergenic 20.0%
!!! TTGAAATATTTTGTCAAAGT+GGG - chr4_1:50179108-50179127 Msa0553240:intron 20.0%
!! TGAATTCACAAATTATAAAC+TGG - chr4_1:50179273-50179292 Msa0553240:intron 20.0%
!! TAGTAATGATTACTTGTTTA+TGG + chr4_1:50179957-50179976 None:intergenic 20.0%
!!! GTTTCATGATATTTTAATGA+TGG - chr4_1:50180180-50180199 Msa0553240:intron 20.0%
!!! GGTTTATTAGACTTTAAAAA+TGG - chr4_1:50180377-50180396 Msa0553240:CDS 20.0%
!! TTGTAAAATTAAATAAAGCC+GGG - chr4_1:50180526-50180545 Msa0553240:intron 20.0%
!!! TGATTATTTTTAGGTGTATT+TGG - chr4_1:50180813-50180832 Msa0553240:CDS 20.0%
!!! GATTATTTTTAGGTGTATTT+GGG - chr4_1:50180814-50180833 Msa0553240:CDS 20.0%
!!! TTTTCAAGTTACATAAAACA+GGG + chr4_1:50181321-50181340 None:intergenic 20.0%
!!! ATTTTCAAGTTACATAAAAC+AGG + chr4_1:50181322-50181341 None:intergenic 20.0%
!!! ACTTGAAAATTGCTTTTTAT+TGG - chr4_1:50181332-50181351 Msa0553240:intron 20.0%
!!! CTTGAAAATTGCTTTTTATT+GGG - chr4_1:50181333-50181352 Msa0553240:intron 20.0%
!!! ATCTGTTTTATCTTGTAATT+TGG - chr4_1:50181441-50181460 Msa0553240:intron 20.0%
!! AAACAACTACATAAAAAAGA+AGG + chr4_1:50181615-50181634 None:intergenic 20.0%
!! AAGTTATTACAGATAAAACA+TGG + chr4_1:50181816-50181835 None:intergenic 20.0%
!! TAATTAATTGATCTATCAGA+TGG + chr4_1:50182038-50182057 None:intergenic 20.0%
!! ATCGATCAGTAATAAATAAT+AGG + chr4_1:50182174-50182193 None:intergenic 20.0%
!! ATAGGCTATTCAAAATAATT+GGG - chr4_1:50183412-50183431 Msa0553240:CDS 20.0%
!! AATATATAAATACCTTTGCA+GGG + chr4_1:50183461-50183480 None:intergenic 20.0%
!! AAATATATAAATACCTTTGC+AGG + chr4_1:50183462-50183481 None:intergenic 20.0%
!!! TTATATGGTTTTACAAATGT+TGG - chr4_1:50183512-50183531 Msa0553240:CDS 20.0%
!! GTTTCTTTATCTTACAATTA+AGG - chr4_1:50183627-50183646 Msa0553240:CDS 20.0%
!!! TTTCATTATTCTATTTTCAG+CGG - chr4_1:50183829-50183848 Msa0553240:CDS 20.0%
!!! ATTTTTTGCATTATTGTTGA+AGG - chr4_1:50184452-50184471 Msa0553240:CDS 20.0%
!!! TTTTTTGCATTATTGTTGAA+GGG - chr4_1:50184453-50184472 Msa0553240:CDS 20.0%
!!! GTAAATTTTATAGACATTAC+AGG - chr4_1:50184495-50184514 Msa0553240:CDS 20.0%
! ATTATTCAATTGCCGAATAA+CGG + chr4_1:50176152-50176171 None:intergenic 25.0%
! GCAGAAGAATTACATAAATT+AGG + chr4_1:50176232-50176251 None:intergenic 25.0%
! ATGTGATCAACAAAATTCAT+CGG + chr4_1:50176682-50176701 None:intergenic 25.0%
! ACATTGATGAAGATTTGATT+GGG - chr4_1:50176698-50176717 Msa0553240:intron 25.0%
!!! TGTATCAGATTTTGATATTC+TGG - chr4_1:50177357-50177376 Msa0553240:intron 25.0%
!! TAATGAGTTGGATAGAAATA+TGG - chr4_1:50177432-50177451 Msa0553240:intron 25.0%
! ACAGAAAACAAAAAGATTAG+AGG + chr4_1:50177956-50177975 None:intergenic 25.0%
! ATTAAAATGACAAAAGCCTT+AGG - chr4_1:50178010-50178029 Msa0553240:intron 25.0%
!!! TAGCAATATTATTTCTGGAA+TGG + chr4_1:50178089-50178108 None:intergenic 25.0%
! TCAAATAAAGGGAAATAATG+GGG + chr4_1:50178123-50178142 None:intergenic 25.0%
! CATCAAATAAAGGGAAATAA+TGG + chr4_1:50178125-50178144 None:intergenic 25.0%
! GCAGAAAATTAAGCAATTAA+TGG + chr4_1:50178154-50178173 None:intergenic 25.0%
! TGATAGAAAATAGTTACTCT+AGG - chr4_1:50178207-50178226 Msa0553240:CDS 25.0%
! GATAGAAAATAGTTACTCTA+GGG - chr4_1:50178208-50178227 Msa0553240:CDS 25.0%
!!! TTTTAAGCATCGAGATTAAT+GGG - chr4_1:50178373-50178392 Msa0553240:intron 25.0%
! GATTGAAAACAAAATGACTT+AGG + chr4_1:50178413-50178432 None:intergenic 25.0%
!!! GTATTATATTAGCCTTCAAT+AGG - chr4_1:50178730-50178749 Msa0553240:CDS 25.0%
!!! AGGTTTTAAAAAATGGTTCA+TGG - chr4_1:50178769-50178788 Msa0553240:CDS 25.0%
!! GTTGAAATATTTTGTCAAAG+TGG - chr4_1:50179107-50179126 Msa0553240:intron 25.0%
!! TGAAATATTTTGTCAAAGTG+GGG - chr4_1:50179109-50179128 Msa0553240:intron 25.0%
! GTTACCTATCTATATTAGTA+CGG + chr4_1:50179135-50179154 None:intergenic 25.0%
! AGTGAAAATACTAATCAGTT+AGG + chr4_1:50179326-50179345 None:intergenic 25.0%
!! TAACTGATTAGTATTTTCAC+TGG - chr4_1:50179325-50179344 Msa0553240:intron 25.0%
! GCATAAATTACTACACTAAA+AGG + chr4_1:50179659-50179678 None:intergenic 25.0%
! AAATATCCATATATGTGACT+TGG + chr4_1:50179808-50179827 None:intergenic 25.0%
!!! TAGACTTTAAAAATGGGTTT+TGG - chr4_1:50180384-50180403 Msa0553240:CDS 25.0%
! TGTAAAATTAAATAAAGCCG+GGG - chr4_1:50180527-50180546 Msa0553240:intron 25.0%
!!! GAACCAACTTGATTATTTTT+AGG - chr4_1:50180804-50180823 Msa0553240:CDS 25.0%
! ACACCTAAAAATAATCAAGT+TGG + chr4_1:50180810-50180829 None:intergenic 25.0%
!! TAAAATGAGCAACTTTTTAG+GGG + chr4_1:50180887-50180906 None:intergenic 25.0%
!! CTAAAATGAGCAACTTTTTA+GGG + chr4_1:50180888-50180907 None:intergenic 25.0%
!!! TTTATGTGCGTATCTTTTTT+TGG + chr4_1:50181036-50181055 None:intergenic 25.0%
! AGTACTCATAAAATACAAAC+TGG + chr4_1:50181071-50181090 None:intergenic 25.0%
! TCTTGATGGGAATTATTTAA+AGG - chr4_1:50181567-50181586 Msa0553240:intron 25.0%
! TCAGGTCAAATATAGAAAAT+AGG - chr4_1:50181660-50181679 Msa0553240:CDS 25.0%
!! TTTACATTTCTAAAAAGCAG+AGG + chr4_1:50181771-50181790 None:intergenic 25.0%
! TATTACAGATAAAACATGGA+GGG + chr4_1:50181812-50181831 None:intergenic 25.0%
! TTATTACAGATAAAACATGG+AGG + chr4_1:50181813-50181832 None:intergenic 25.0%
!! GTAATAACTTTTGCATTTGA+CGG - chr4_1:50181826-50181845 Msa0553240:intron 25.0%
!! ATTTGAAACAATATCGCATT+CGG - chr4_1:50182066-50182085 Msa0553240:intron 25.0%
!!! TTACTGTAATTTTTGGATTC+TGG + chr4_1:50182489-50182508 None:intergenic 25.0%
! CAGTAAAAAAAAGCTCAATT+TGG - chr4_1:50182503-50182522 Msa0553240:CDS 25.0%
!! CAATTTGGTAACATTTATGT+TGG - chr4_1:50182518-50182537 Msa0553240:intron 25.0%
! TGTAGATGTTGTTAACTTTA+TGG - chr4_1:50182957-50182976 Msa0553240:CDS 25.0%
! GAATGACGACAATTATAAAA+CGG + chr4_1:50183032-50183051 None:intergenic 25.0%
! ATTTCAGATATTGAAACAGA+TGG + chr4_1:50183186-50183205 None:intergenic 25.0%
!! TTCAATATCTGAAATCAAGA+AGG - chr4_1:50183191-50183210 Msa0553240:CDS 25.0%
!!! GGTCATTTTTTGTTAAAGAT+TGG + chr4_1:50183338-50183357 None:intergenic 25.0%
! TCTTTAACAAAAAATGACCA+TGG - chr4_1:50183339-50183358 Msa0553240:CDS 25.0%
! GATAGGCTATTCAAAATAAT+TGG - chr4_1:50183411-50183430 Msa0553240:CDS 25.0%
! TAGGCTATTCAAAATAATTG+GGG - chr4_1:50183413-50183432 Msa0553240:CDS 25.0%
!!! ATCTTATCAACCTTGTTATT+TGG + chr4_1:50183485-50183504 None:intergenic 25.0%
! GATAAGATTACTGCTTTATA+TGG - chr4_1:50183497-50183516 Msa0553240:CDS 25.0%
! CTTACAATTAAGGCAATTAA+CGG - chr4_1:50183637-50183656 Msa0553240:CDS 25.0%
!! TTCATTATTCTATTTTCAGC+GGG - chr4_1:50183830-50183849 Msa0553240:CDS 25.0%
!!! TTTAATTTTTCTGCTGCATT+TGG - chr4_1:50184121-50184140 Msa0553240:CDS 25.0%
! TTTACTTTACTGCAAAAGTT+TGG + chr4_1:50184151-50184170 None:intergenic 25.0%
!! CTTTTGCAGTAAAGTAAATT+CGG - chr4_1:50184153-50184172 Msa0553240:CDS 25.0%
!!! CGGCTTTGAATTTTGATAAA+CGG - chr4_1:50175921-50175940 Msa0553240:three_prime_UTR 30.0%
GTTCAAAATTCTGATCAACT+AGG + chr4_1:50176210-50176229 None:intergenic 30.0%
!!! TCAACCTTTTGAAGTTAAGA+AGG - chr4_1:50176294-50176313 Msa0553240:CDS 30.0%
TGATCCTTCTTAACTTCAAA+AGG + chr4_1:50176301-50176320 None:intergenic 30.0%
TTTGTTGAGTTTAAATCGCA+TGG - chr4_1:50176361-50176380 Msa0553240:CDS 30.0%
TTGTTGAGTTTAAATCGCAT+GGG - chr4_1:50176362-50176381 Msa0553240:intron 30.0%
TGGAAAAGAAGGAAAATTGA+AGG - chr4_1:50176396-50176415 Msa0553240:intron 30.0%
GAAAATTGAAGGAGAAAAGT+GGG - chr4_1:50176407-50176426 Msa0553240:intron 30.0%
CACATTGATGAAGATTTGAT+TGG - chr4_1:50176697-50176716 Msa0553240:intron 30.0%
CATTGATGAAGATTTGATTG+GGG - chr4_1:50176699-50176718 Msa0553240:intron 30.0%
AGGTGAAAATATTTGTGTTG+AGG - chr4_1:50176801-50176820 Msa0553240:CDS 30.0%
! GGTGATAGAATGTTGAATTT+TGG - chr4_1:50176928-50176947 Msa0553240:intron 30.0%
! CCCAAGTTTTCTTTTTGTTA+GGG + chr4_1:50177038-50177057 None:intergenic 30.0%
CCCTAACAAAAAGAAAACTT+GGG - chr4_1:50177035-50177054 Msa0553240:CDS 30.0%
! ACCCAAGTTTTCTTTTTGTT+AGG + chr4_1:50177039-50177058 None:intergenic 30.0%
AAGAAAACTTGGGTAAATGT+TGG - chr4_1:50177045-50177064 Msa0553240:intron 30.0%
GAATAAGGAACCTTTATGTT+TGG + chr4_1:50177093-50177112 None:intergenic 30.0%
TGAATGAGGATCACAAATTA+AGG - chr4_1:50177223-50177242 Msa0553240:intron 30.0%
GAATGAGGATCACAAATTAA+GGG - chr4_1:50177224-50177243 Msa0553240:intron 30.0%
TAATTAAGTCACTGCAGATA+TGG + chr4_1:50177334-50177353 None:intergenic 30.0%
AGAAGTAATTGTAAAAAGCC+AGG + chr4_1:50177392-50177411 None:intergenic 30.0%
! CTAAATATGCTCTAAATCAG+AGG - chr4_1:50177676-50177695 Msa0553240:intron 30.0%
AGTTATTACAAACAAGGACT+TGG - chr4_1:50177739-50177758 Msa0553240:intron 30.0%
GACTGTAGCAATATTATTTC+TGG + chr4_1:50178094-50178113 None:intergenic 30.0%
! AATTGCTTAATTTTCTGCTC+TGG - chr4_1:50178156-50178175 Msa0553240:CDS 30.0%
TTCTATCAAAGAAGACTCTA+AGG + chr4_1:50178195-50178214 None:intergenic 30.0%
AGGTATAGTTGAAGTTAACT+AGG - chr4_1:50178236-50178255 Msa0553240:CDS 30.0%
GGTATAGTTGAAGTTAACTA+GGG - chr4_1:50178237-50178256 Msa0553240:CDS 30.0%
!!! GTTTTAAGCATCGAGATTAA+TGG - chr4_1:50178372-50178391 Msa0553240:intron 30.0%
!! TTTAAGTTGTTATCTTGCTC+TGG - chr4_1:50178436-50178455 Msa0553240:intron 30.0%
! TTAAGTTGTTATCTTGCTCT+GGG - chr4_1:50178437-50178456 Msa0553240:intron 30.0%
GATAACTTGATATATCATGG+AGG - chr4_1:50178600-50178619 Msa0553240:intron 30.0%
! TTCTTACACTGAACTAGTTT+GGG - chr4_1:50178704-50178723 Msa0553240:CDS 30.0%
TAGGAAAACTGCCATAAAAA+AGG - chr4_1:50178749-50178768 Msa0553240:CDS 30.0%
CAAAAATTCGTGGTTGAATA+CGG + chr4_1:50178852-50178871 None:intergenic 30.0%
TCTGATATTGCAAAAATTCG+TGG + chr4_1:50178862-50178881 None:intergenic 30.0%
! ACGAATTTTTGCAATATCAG+AGG - chr4_1:50178861-50178880 Msa0553240:intron 30.0%
! CTTAGTCTTTAATCCAATGT+TGG - chr4_1:50178958-50178977 Msa0553240:intron 30.0%
TTTAATCCAATGTTGGACTT+TGG - chr4_1:50178965-50178984 Msa0553240:intron 30.0%
TTAATCCAATGTTGGACTTT+GGG - chr4_1:50178966-50178985 Msa0553240:intron 30.0%
! AAACCTCTAGATTTTGTGAA+CGG + chr4_1:50179252-50179271 None:intergenic 30.0%
ATACTAATCAGTTAGGAAGA+GGG + chr4_1:50179319-50179338 None:intergenic 30.0%
AATACTAATCAGTTAGGAAG+AGG + chr4_1:50179320-50179339 None:intergenic 30.0%
!!! AGCAGAAATGTTCTAGTTTT+AGG + chr4_1:50180238-50180257 None:intergenic 30.0%
! AAATTCAAACAGGAGAGTAT+AGG + chr4_1:50180508-50180527 None:intergenic 30.0%
!!! CCTTGATAACTAGCTTTTAA+CGG + chr4_1:50180648-50180667 None:intergenic 30.0%
CGTTAAAAGCTAGTTATCAA+GGG - chr4_1:50180646-50180665 Msa0553240:intron 30.0%
GTTAAAAGCTAGTTATCAAG+GGG - chr4_1:50180647-50180666 Msa0553240:intron 30.0%
TTAAAAGCTAGTTATCAAGG+GGG - chr4_1:50180648-50180667 Msa0553240:intron 30.0%
!!! TTTTTTTTGAGGTCTCGAAA+TGG - chr4_1:50180736-50180755 Msa0553240:CDS 30.0%
!!! TTTTTTTGAGGTCTCGAAAT+GGG - chr4_1:50180737-50180756 Msa0553240:CDS 30.0%
!! AAAATGAGCAACTTTTTAGG+GGG + chr4_1:50180886-50180905 None:intergenic 30.0%
! GCTAAAATGAGCAACTTTTT+AGG + chr4_1:50180889-50180908 None:intergenic 30.0%
CTTAGAATACAACTTCAATG+AGG + chr4_1:50181271-50181290 None:intergenic 30.0%
! TAACTTGTAACTGAATCAGA+CGG - chr4_1:50181634-50181653 Msa0553240:intron 30.0%
!! TTTGACGGACTTCTTTATTT+AGG - chr4_1:50181841-50181860 Msa0553240:intron 30.0%
! ATTTAGGATTTCAATTGCAC+AGG - chr4_1:50181857-50181876 Msa0553240:intron 30.0%
GAGGATAATGCCAATTATAA+AGG - chr4_1:50182011-50182030 Msa0553240:intron 30.0%
ATCAGATGGTCCTTTATAAT+TGG + chr4_1:50182024-50182043 None:intergenic 30.0%
GCGATATTGTTTCAAATCAT+TGG + chr4_1:50182063-50182082 None:intergenic 30.0%
!! ATAGGATAAAAGAGTACTGA+TGG + chr4_1:50182156-50182175 None:intergenic 30.0%
ATACACACAAGTAGAATTGA+TGG + chr4_1:50182245-50182264 None:intergenic 30.0%
AAAATGGATCACTAAAGTTC+AGG + chr4_1:50182358-50182377 None:intergenic 30.0%
!! TGATCCATTTTTCAGTATCT+AGG - chr4_1:50182367-50182386 Msa0553240:CDS 30.0%
!! GATCCATTTTTCAGTATCTA+GGG - chr4_1:50182368-50182387 Msa0553240:CDS 30.0%
AACTAAATAAAGTTCGTGTC+AGG - chr4_1:50182396-50182415 Msa0553240:CDS 30.0%
TTTAAATCTGTGGTACTCAA+TGG - chr4_1:50182635-50182654 Msa0553240:intron 30.0%
TAATTCTTCTCAAGTGTCAA+TGG - chr4_1:50182679-50182698 Msa0553240:intron 30.0%
AATTCTTCTCAAGTGTCAAT+GGG - chr4_1:50182680-50182699 Msa0553240:intron 30.0%
! GAAATCTCTACCAAAGTTTT+AGG + chr4_1:50182834-50182853 None:intergenic 30.0%
TATTGCTTGCTTGTAATACT+TGG - chr4_1:50182918-50182937 Msa0553240:intron 30.0%
AATCTCTCTGTTGCTAATTT+AGG - chr4_1:50183096-50183115 Msa0553240:CDS 30.0%
ATCTCTCTGTTGCTAATTTA+GGG - chr4_1:50183097-50183116 Msa0553240:CDS 30.0%
TGAATCAAAAAAACCTTGTC+AGG + chr4_1:50183246-50183265 None:intergenic 30.0%
ATGGAAAAAATGATGGCATT+GGG + chr4_1:50183540-50183559 None:intergenic 30.0%
CTCTATAAGCTTCTGATATA+AGG + chr4_1:50183673-50183692 None:intergenic 30.0%
CTTATATCAGAAGCTTATAG+AGG - chr4_1:50183671-50183690 Msa0553240:CDS 30.0%
! GAAGATTTTACCTAGCAAAT+AGG - chr4_1:50183693-50183712 Msa0553240:CDS 30.0%
!!! TCAAGTTTCGGTCATTTTTA+AGG - chr4_1:50183748-50183767 Msa0553240:CDS 30.0%
!!! CAAGTTTCGGTCATTTTTAA+GGG - chr4_1:50183749-50183768 Msa0553240:CDS 30.0%
ATAGAGCTTGAAAAACTTGA+AGG + chr4_1:50183785-50183804 None:intergenic 30.0%
AAGTATGGGTAGAAATAATG+CGG - chr4_1:50183905-50183924 Msa0553240:CDS 30.0%
TTGACAAGATAAAGACAACA+TGG - chr4_1:50184321-50184340 Msa0553240:CDS 30.0%
TGTAATTACAATCGTTATCG+TGG + chr4_1:50184564-50184583 None:intergenic 30.0%
! TGAGTTAATGTTTTCCTCAA+TGG - chr4_1:50184605-50184624 Msa0553240:five_prime_UTR 30.0%
TCCATTGATCGTCGTTTAAT+CGG + chr4_1:50175698-50175717 None:intergenic 35.0%
TTGATAAACGGATCAGTGAT+CGG - chr4_1:50175933-50175952 Msa0553240:three_prime_UTR 35.0%
CGGTTGAAGAATCTCAAAAT+CGG - chr4_1:50175953-50175972 Msa0553240:three_prime_UTR 35.0%
GAGCAAGCTGAATATTTCAA+CGG - chr4_1:50176018-50176037 Msa0553240:three_prime_UTR 35.0%
AAGCTGAATATTTCAACGGA+AGG - chr4_1:50176022-50176041 Msa0553240:three_prime_UTR 35.0%
!! TTCAACGGAAGGTTTTGATA+AGG - chr4_1:50176033-50176052 Msa0553240:three_prime_UTR 35.0%
TGATAAGGTTCGTGTTGAAT+CGG - chr4_1:50176048-50176067 Msa0553240:three_prime_UTR 35.0%
TTGAAGAAGAAACTCAGCAT+TGG - chr4_1:50176085-50176104 Msa0553240:three_prime_UTR 35.0%
AGGTAACAATGTAGAGGATT+CGG - chr4_1:50176120-50176139 Msa0553240:three_prime_UTR 35.0%
ATTCGGCAAATTCCGTTATT+CGG - chr4_1:50176137-50176156 Msa0553240:three_prime_UTR 35.0%
GGAAAATTGAAGGAGAAAAG+TGG - chr4_1:50176406-50176425 Msa0553240:intron 35.0%
! GAATTTGAAGCATTCTACAC+CGG - chr4_1:50176456-50176475 Msa0553240:intron 35.0%
!!! GGGCATGGTTTTGTTTTTAA+AGG - chr4_1:50176499-50176518 Msa0553240:intron 35.0%
!!! TCAGCTAGTTTTTCCTGATA+AGG + chr4_1:50176589-50176608 None:intergenic 35.0%
TCAACATTCTATCACCATCA+CGG + chr4_1:50176924-50176943 None:intergenic 35.0%
!! TCTTTTTGTTAGGGCGTTTT+GGG + chr4_1:50177029-50177048 None:intergenic 35.0%
!! TTCTTTTTGTTAGGGCGTTT+TGG + chr4_1:50177030-50177049 None:intergenic 35.0%
GCCCTAACAAAAAGAAAACT+TGG - chr4_1:50177034-50177053 Msa0553240:CDS 35.0%
! TTTTCCTCAACCCAAAACAA+GGG - chr4_1:50177191-50177210 Msa0553240:intron 35.0%
! AATAAAAGTATACTCACCGG+AGG + chr4_1:50177293-50177312 None:intergenic 35.0%
ATATTCTGGATTACAAGTCC+TGG - chr4_1:50177371-50177390 Msa0553240:intron 35.0%
! TGGCATATGATAGAGCATTA+TGG - chr4_1:50177452-50177471 Msa0553240:intron 35.0%
! CAAGTCTTATCCCATTAAGT+GGG + chr4_1:50177501-50177520 None:intergenic 35.0%
GCTGAGAGTTATTACAAACA+AGG - chr4_1:50177733-50177752 Msa0553240:intron 35.0%
TACCTAAAGAACAAGCATCT+CGG - chr4_1:50177767-50177786 Msa0553240:intron 35.0%
GAGATGCAATAGAAGATTGT+AGG - chr4_1:50177860-50177879 Msa0553240:intron 35.0%
AAAAAGATTAGAGGCAACGA+TGG + chr4_1:50177947-50177966 None:intergenic 35.0%
AATGTAAATGTGGGCTCAAA+TGG - chr4_1:50178056-50178075 Msa0553240:intron 35.0%
ATGTAAATGTGGGCTCAAAT+GGG - chr4_1:50178057-50178076 Msa0553240:intron 35.0%
! AAAGGGAAATAATGGGGATT+GGG + chr4_1:50178117-50178136 None:intergenic 35.0%
! TAAAGGGAAATAATGGGGAT+TGG + chr4_1:50178118-50178137 None:intergenic 35.0%
!! ATAGTTACTCTAGGGTTGTT+AGG - chr4_1:50178216-50178235 Msa0553240:CDS 35.0%
TTGAAGTTAACTAGGGTTGT+TGG - chr4_1:50178244-50178263 Msa0553240:CDS 35.0%
TGAAGTTAACTAGGGTTGTT+GGG - chr4_1:50178245-50178264 Msa0553240:CDS 35.0%
TTCAAAATGTGCTTGCAATC+AGG - chr4_1:50178485-50178504 Msa0553240:intron 35.0%
TGTAGATCGTAAGATTTCAG+TGG - chr4_1:50178520-50178539 Msa0553240:intron 35.0%
CTTCTTACACTGAACTAGTT+TGG - chr4_1:50178703-50178722 Msa0553240:CDS 35.0%
! TATGGCAGTTTTCCTATTGA+AGG + chr4_1:50178745-50178764 None:intergenic 35.0%
TGATTAACACCTTGATCACA+AGG - chr4_1:50178897-50178916 Msa0553240:intron 35.0%
ACTTTGAATCCTTGTGATCA+AGG + chr4_1:50178909-50178928 None:intergenic 35.0%
AAAAACAGTCTACTGCTTGA+TGG - chr4_1:50179193-50179212 Msa0553240:intron 35.0%
! AACCTCTAGATTTTGTGAAC+GGG + chr4_1:50179251-50179270 None:intergenic 35.0%
TACTAATCAGTTAGGAAGAG+GGG + chr4_1:50179318-50179337 None:intergenic 35.0%
! GGCATTGGAACATATTAATG+AGG - chr4_1:50179423-50179442 Msa0553240:intron 35.0%
! GAAAGCAGAAGCTCTTTTAA+TGG - chr4_1:50179486-50179505 Msa0553240:intron 35.0%
!! TTATGCCAATTGATTCGTGT+TGG - chr4_1:50179673-50179692 Msa0553240:intron 35.0%
ATATCAGCTGAGTAGATATG+AGG - chr4_1:50179712-50179731 Msa0553240:intron 35.0%
AAGTTGTCTACTTCAGACTA+TGG - chr4_1:50179840-50179859 Msa0553240:intron 35.0%
GCAAAAATGCATGTGAGAAA+GGG + chr4_1:50180345-50180364 None:intergenic 35.0%
TGCAAAAATGCATGTGAGAA+AGG + chr4_1:50180346-50180365 None:intergenic 35.0%
! CATTTTTGCAGCAGATATTG+TGG - chr4_1:50180356-50180375 Msa0553240:CDS 35.0%
!! TGTGTTGATAGGTATTGACT+TGG + chr4_1:50180612-50180631 None:intergenic 35.0%
! TGTTCTCTAAGTGTGTTGAT+AGG + chr4_1:50180623-50180642 None:intergenic 35.0%
CCGTTAAAAGCTAGTTATCA+AGG - chr4_1:50180645-50180664 Msa0553240:intron 35.0%
AATCCCACTTTGAGTAGTAT+GGG + chr4_1:50180706-50180725 None:intergenic 35.0%
AAATCCCACTTTGAGTAGTA+TGG + chr4_1:50180707-50180726 None:intergenic 35.0%
!!! TTTTTTGAGGTCTCGAAATG+GGG - chr4_1:50180738-50180757 Msa0553240:CDS 35.0%
! TTGGTTCTTATGAATCTGGT+GGG + chr4_1:50180791-50180810 None:intergenic 35.0%
!! CAAGTTGGTTCTTATGAATC+TGG + chr4_1:50180795-50180814 None:intergenic 35.0%
!!! GTGCGTATCTTTTTTTGGTT+GGG + chr4_1:50181031-50181050 None:intergenic 35.0%
!!! TGTGCGTATCTTTTTTTGGT+TGG + chr4_1:50181032-50181051 None:intergenic 35.0%
!! TTTATGAGTACTGATGAGTG+AGG - chr4_1:50181079-50181098 Msa0553240:intron 35.0%
! GAGGATGGTATAATTTGTAC+AGG - chr4_1:50181098-50181117 Msa0553240:intron 35.0%
TGGTTATTGCCTATTGGAAT+GGG + chr4_1:50181124-50181143 None:intergenic 35.0%
TTGGTTATTGCCTATTGGAA+TGG + chr4_1:50181125-50181144 None:intergenic 35.0%
!! GTGTATTGGTTATTGCCTAT+TGG + chr4_1:50181130-50181149 None:intergenic 35.0%
TAGAAAAGAGTAGAGAAGCA+AGG + chr4_1:50181202-50181221 None:intergenic 35.0%
!! ATTTTTCTGGTGCCTTTTGA+TGG + chr4_1:50181239-50181258 None:intergenic 35.0%
! GAGGCATATGAGTATTTTTC+TGG + chr4_1:50181252-50181271 None:intergenic 35.0%
ACCTAACACTTTATATGCAG+CGG + chr4_1:50181506-50181525 None:intergenic 35.0%
TAAAGGTTTCTCTCTTCAAC+TGG - chr4_1:50181584-50181603 Msa0553240:intron 35.0%
AACTTGTAACTGAATCAGAC+GGG - chr4_1:50181635-50181654 Msa0553240:intron 35.0%
TGGATAATGCTCATCAAACT+AGG + chr4_1:50181698-50181717 None:intergenic 35.0%
! GATCAGCTATTGATTGAACA+TGG + chr4_1:50181718-50181737 None:intergenic 35.0%
TCAATCAATAGCTGATCGTT+AGG - chr4_1:50181721-50181740 Msa0553240:CDS 35.0%
CAATCAATAGCTGATCGTTA+GGG - chr4_1:50181722-50181741 Msa0553240:CDS 35.0%
! AAATGTTTTCACACTCTTGC+AGG - chr4_1:50181890-50181909 Msa0553240:intron 35.0%
! AATCCGTTTGAGGTTGAAAT+GGG - chr4_1:50182286-50182305 Msa0553240:intron 35.0%
TTTCCCATTTCAACCTCAAA+CGG + chr4_1:50182292-50182311 None:intergenic 35.0%
TAAAGTTCAGGAAGCAAAGA+AGG + chr4_1:50182346-50182365 None:intergenic 35.0%
TGACCCTAGATACTGAAAAA+TGG + chr4_1:50182374-50182393 None:intergenic 35.0%
TGTCAGGATTTGACTGAATA+AGG - chr4_1:50182412-50182431 Msa0553240:CDS 35.0%
ACGGATTCTTTCATGCAAAA+TGG + chr4_1:50182560-50182579 None:intergenic 35.0%
TAACCTTCACTACAATGATG+TGG + chr4_1:50182608-50182627 None:intergenic 35.0%
GTGCACTAATGGAAAACATA+TGG - chr4_1:50182744-50182763 Msa0553240:intron 35.0%
ATGTAACCTGTTCATTAGAC+AGG - chr4_1:50182803-50182822 Msa0553240:intron 35.0%
ACAGGAATCACCTAAAACTT+TGG - chr4_1:50182821-50182840 Msa0553240:intron 35.0%
! AATACATTTGGGACTAACCA+AGG - chr4_1:50182864-50182883 Msa0553240:intron 35.0%
! ATACATTTGGGACTAACCAA+GGG - chr4_1:50182865-50182884 Msa0553240:intron 35.0%
! GTCTACCATGTTCTTTTACA+GGG + chr4_1:50182985-50183004 None:intergenic 35.0%
! AGTCTACCATGTTCTTTTAC+AGG + chr4_1:50182986-50183005 None:intergenic 35.0%
ACGACAATTATAAAACGGCA+TGG + chr4_1:50183027-50183046 None:intergenic 35.0%
AAAAATGACCATGGAGATGA+TGG - chr4_1:50183348-50183367 Msa0553240:CDS 35.0%
AAAATGACCATGGAGATGAT+GGG - chr4_1:50183349-50183368 Msa0553240:CDS 35.0%
AAGTACATAGAGATGCTGAT+AGG - chr4_1:50183394-50183413 Msa0553240:CDS 35.0%
GCTATTCAAAATAATTGGGG+AGG - chr4_1:50183416-50183435 Msa0553240:CDS 35.0%
CATGGAAAAAATGATGGCAT+TGG + chr4_1:50183541-50183560 None:intergenic 35.0%
!!! CAATGCCATCATTTTTTCCA+TGG - chr4_1:50183539-50183558 Msa0553240:CDS 35.0%
AATCCATATTCACCACTTCA+AGG + chr4_1:50183582-50183601 None:intergenic 35.0%
AGCTTCTGATATAAGGTCAA+TGG + chr4_1:50183666-50183685 None:intergenic 35.0%
GTCTTGAATTCCTATTTGCT+AGG + chr4_1:50183706-50183725 None:intergenic 35.0%
! TATTTCTACCCATACTTCCA+GGG + chr4_1:50183902-50183921 None:intergenic 35.0%
!! TTATTTCTACCCATACTTCC+AGG + chr4_1:50183903-50183922 None:intergenic 35.0%
AACAATCCAATAGGAGACAT+TGG - chr4_1:50183955-50183974 Msa0553240:CDS 35.0%
!! TCATACGGTAATTCTGAAAC+TGG - chr4_1:50183993-50184012 Msa0553240:CDS 35.0%
! CAACTTTGTTACTTCCTACT+TGG + chr4_1:50184023-50184042 None:intergenic 35.0%
TAGGAAGTAACAAAGTTGCA+TGG - chr4_1:50184025-50184044 Msa0553240:CDS 35.0%
CATGGAATGTTAATCCAGTT+AGG - chr4_1:50184043-50184062 Msa0553240:CDS 35.0%
ATGTTAATCCAGTTAGGTTC+TGG - chr4_1:50184049-50184068 Msa0553240:CDS 35.0%
!! ATTAAAAGCACCACCTAACA+AGG + chr4_1:50184107-50184126 None:intergenic 35.0%
TGACATGTCATTACAGGAAT+GGG + chr4_1:50184245-50184264 None:intergenic 35.0%
AACTAAGCTGGTCAATGTTT+CGG - chr4_1:50184273-50184292 Msa0553240:CDS 35.0%
CAACTCCATGCTCAAATTAT+CGG + chr4_1:50184385-50184404 None:intergenic 35.0%
TGATAACCAAGCTTGTGAAA+AGG - chr4_1:50184420-50184439 Msa0553240:CDS 35.0%
TCCGATTAAACGACGATCAA+TGG - chr4_1:50175694-50175713 Msa0553240:three_prime_UTR 40.0%
TCAATGGAACCGTTAAACTC+CGG - chr4_1:50175710-50175729 Msa0553240:three_prime_UTR 40.0%
! AGGATCCGATAAGGTTGATT+CGG - chr4_1:50175901-50175920 Msa0553240:three_prime_UTR 40.0%
CAAAGCCGAATCAACCTTAT+CGG + chr4_1:50175909-50175928 None:intergenic 40.0%
AATCTCAAAATCGGAACCGA+GGG - chr4_1:50175962-50175981 Msa0553240:three_prime_UTR 40.0%
! CTCAGCATTGGAGAAAATGA+AGG - chr4_1:50176097-50176116 Msa0553240:three_prime_UTR 40.0%
! AGCATTGGAGAAAATGAAGG+AGG - chr4_1:50176100-50176119 Msa0553240:three_prime_UTR 40.0%
TGAAGGAGGTAACAATGTAG+AGG - chr4_1:50176114-50176133 Msa0553240:three_prime_UTR 40.0%
TCAGAGTAAACCAGAAGCTT+CGG - chr4_1:50176330-50176349 Msa0553240:CDS 40.0%
! CCTTCTTTTCCACCAATCTT+CGG + chr4_1:50176388-50176407 None:intergenic 40.0%
TGATAAGGAGAAACCTCCAT+TGG + chr4_1:50176574-50176593 None:intergenic 40.0%
AATGGAGGTTTCTCCTTATC+AGG - chr4_1:50176573-50176592 Msa0553240:intron 40.0%
AGATAGAAAGGAGGCGAAAT+CGG - chr4_1:50176768-50176787 Msa0553240:CDS 40.0%
TTGTGTTGAGGAAGAGACAA+AGG - chr4_1:50176813-50176832 Msa0553240:CDS 40.0%
! TAAGTCTGCTAGTGATAGTG+TGG - chr4_1:50176870-50176889 Msa0553240:CDS 40.0%
CAACATTCTATCACCATCAC+GGG + chr4_1:50176923-50176942 None:intergenic 40.0%
! TGCCATTTGCAACTCTTACT+GGG - chr4_1:50177124-50177143 Msa0553240:intron 40.0%
TTCCCAGTAAGAGTTGCAAA+TGG + chr4_1:50177129-50177148 None:intergenic 40.0%
GGAAGCCTAATATTGTGTCA+GGG - chr4_1:50177145-50177164 Msa0553240:intron 40.0%
TCTTGCCCTGACACAATATT+AGG + chr4_1:50177153-50177172 None:intergenic 40.0%
! CTTTTCCTCAACCCAAAACA+AGG - chr4_1:50177190-50177209 Msa0553240:intron 40.0%
!!! ACACCAGAAACCCTTGTTTT+GGG + chr4_1:50177204-50177223 None:intergenic 40.0%
TGAGGATCACAAATTAAGGG+AGG - chr4_1:50177227-50177246 Msa0553240:intron 40.0%
! CCAAGTCTTATCCCATTAAG+TGG + chr4_1:50177502-50177521 None:intergenic 40.0%
CCACTTAATGGGATAAGACT+TGG - chr4_1:50177499-50177518 Msa0553240:intron 40.0%
TGCAATAGAAGATTGTAGGC+TGG - chr4_1:50177864-50177883 Msa0553240:intron 40.0%
CTAACAGCTGTCATATCCTA+AGG + chr4_1:50178029-50178048 None:intergenic 40.0%
CTTAGGATATGACAGCTGTT+AGG - chr4_1:50178027-50178046 Msa0553240:intron 40.0%
TAGGACCTCGAATGTAAATG+TGG - chr4_1:50178046-50178065 Msa0553240:intron 40.0%
AGGACCTCGAATGTAAATGT+GGG - chr4_1:50178047-50178066 Msa0553240:intron 40.0%
! AAGGGAAATAATGGGGATTG+GGG + chr4_1:50178116-50178135 None:intergenic 40.0%
!! AAGACTCTAAGGCTGTTGAT+AGG + chr4_1:50178184-50178203 None:intergenic 40.0%
TCATGAAGTGCAAGTATGCA+AGG + chr4_1:50178347-50178366 None:intergenic 40.0%
TTCCCGTTCACAAAATCTAG+AGG - chr4_1:50179246-50179265 Msa0553240:intron 40.0%
ACTAATCAGTTAGGAAGAGG+GGG + chr4_1:50179317-50179336 None:intergenic 40.0%
! GCAGAAGCTCTTTTAATGGT+TGG - chr4_1:50179490-50179509 Msa0553240:intron 40.0%
GTTAGCCAACACGAATCAAT+TGG + chr4_1:50179681-50179700 None:intergenic 40.0%
TGGTTGCCAAGTCACATATA+TGG - chr4_1:50179799-50179818 Msa0553240:intron 40.0%
TTGTCTACTTCAGACTATGG+AGG - chr4_1:50179843-50179862 Msa0553240:intron 40.0%
CTTAAAGCCTACTTTCACCT+AGG - chr4_1:50179878-50179897 Msa0553240:intron 40.0%
AAGCTTTCCTAGGTGAAAGT+AGG + chr4_1:50179888-50179907 None:intergenic 40.0%
GCTGGAACAACAAGAAGAAA+AGG - chr4_1:50179925-50179944 Msa0553240:intron 40.0%
!! GAAATGTACAGAAGTGTCCT+AGG + chr4_1:50180295-50180314 None:intergenic 40.0%
TGCAATCGAGTTACTTCTAC+TGG - chr4_1:50180444-50180463 Msa0553240:CDS 40.0%
! GTTGTGATTGTTGTTGCTCT+TGG - chr4_1:50180466-50180485 Msa0553240:CDS 40.0%
CATGGAACAGGATTCTGATA+GGG - chr4_1:50180566-50180585 Msa0553240:intron 40.0%
TTTGAGTAGTATGGGATGCT+TGG + chr4_1:50180698-50180717 None:intergenic 40.0%
CATCCCATACTACTCAAAGT+GGG - chr4_1:50180700-50180719 Msa0553240:intron 40.0%
TGGTTCTTATGAATCTGGTG+GGG + chr4_1:50180790-50180809 None:intergenic 40.0%
! GTTGGTTCTTATGAATCTGG+TGG + chr4_1:50180792-50180811 None:intergenic 40.0%
AGATACGCACATAAACCCTT+TGG - chr4_1:50181041-50181060 Msa0553240:intron 40.0%
GATACGCACATAAACCCTTT+GGG - chr4_1:50181042-50181061 Msa0553240:intron 40.0%
ATACAAACTGGTAGCCCAAA+GGG + chr4_1:50181059-50181078 None:intergenic 40.0%
AATACAAACTGGTAGCCCAA+AGG + chr4_1:50181060-50181079 None:intergenic 40.0%
TTACAGAGTAGCACGTGTAT+TGG + chr4_1:50181144-50181163 None:intergenic 40.0%
! GTGGAAGGTGATCGATTTAA+AGG + chr4_1:50181180-50181199 None:intergenic 40.0%
AAAAGAGTAGAGAAGCAAGG+TGG + chr4_1:50181199-50181218 None:intergenic 40.0%
ACAACTTCTCTGCCATCAAA+AGG - chr4_1:50181224-50181243 Msa0553240:intron 40.0%
! TCTTTTCAAATGCAGACTGC+AGG - chr4_1:50181367-50181386 Msa0553240:intron 40.0%
! CTTTTCAAATGCAGACTGCA+GGG - chr4_1:50181368-50181387 Msa0553240:intron 40.0%
CAATAACAGACAGCTGCAAA+TGG + chr4_1:50181475-50181494 None:intergenic 40.0%
ACTTGTAACTGAATCAGACG+GGG - chr4_1:50181636-50181655 Msa0553240:intron 40.0%
ACAGATAAAACATGGAGGGA+AGG + chr4_1:50181808-50181827 None:intergenic 40.0%
ACTTCTCTCTCTTCTCAGTA+AGG - chr4_1:50181983-50182002 Msa0553240:intron 40.0%
CTTCTCTCTCTTCTCAGTAA+GGG - chr4_1:50181984-50182003 Msa0553240:intron 40.0%
TTCTCTCTCTTCTCAGTAAG+GGG - chr4_1:50181985-50182004 Msa0553240:intron 40.0%
!! CAAGTAGAATTGATGGTGAC+TGG + chr4_1:50182238-50182257 None:intergenic 40.0%
! CAATCCGTTTGAGGTTGAAA+TGG - chr4_1:50182285-50182304 Msa0553240:intron 40.0%
TGGGAAACTTTCAGACGTAA+AGG - chr4_1:50182305-50182324 Msa0553240:CDS 40.0%
GGGAAACTTTCAGACGTAAA+GGG - chr4_1:50182306-50182325 Msa0553240:CDS 40.0%
GGATTCTGGATGTGTATTTG+AGG + chr4_1:50182475-50182494 None:intergenic 40.0%
GTGATTCCTGTCTAATGAAC+AGG + chr4_1:50182812-50182831 None:intergenic 40.0%
! TATTGAGGTACTAGTACCCT+TGG + chr4_1:50182884-50182903 None:intergenic 40.0%
AACTGACTGACAGCTTATTG+AGG + chr4_1:50182899-50182918 None:intergenic 40.0%
TGGTACCCTGTAAAAGAACA+TGG - chr4_1:50182977-50182996 Msa0553240:CDS 40.0%
TACTTGAACCACAACACATG+TGG + chr4_1:50183054-50183073 None:intergenic 40.0%
TGATTGACGTTGTGATTGCA+GGG - chr4_1:50183152-50183171 Msa0553240:CDS 40.0%
ACTTAGACATCATCCTGACA+AGG - chr4_1:50183230-50183249 Msa0553240:CDS 40.0%
GATATGGAAGGTTATTGCTG+AGG - chr4_1:50183371-50183390 Msa0553240:CDS 40.0%
TGGCTCCATGGAAAAAATGA+TGG + chr4_1:50183547-50183566 None:intergenic 40.0%
AGTCCTTGAAGTGGTGAATA+TGG - chr4_1:50183576-50183595 Msa0553240:CDS 40.0%
CTCACTCGTTTGTCAAGTTT+CGG - chr4_1:50183736-50183755 Msa0553240:CDS 40.0%
! TATTCTATTTTCAGCGGGCA+CGG - chr4_1:50183835-50183854 Msa0553240:CDS 40.0%
GCTCATCTGAACAATCCAAT+AGG - chr4_1:50183946-50183965 Msa0553240:CDS 40.0%
AGAGAGGTTTGGAGATCATA+CGG - chr4_1:50183978-50183997 Msa0553240:CDS 40.0%
CTTTACTGCAAAAGTTTGGC+AGG + chr4_1:50184147-50184166 None:intergenic 40.0%
!!! CGATCCTTTGAGTTTTGAAG+AGG - chr4_1:50184206-50184225 Msa0553240:CDS 40.0%
CACACCTCTTCAAAACTCAA+AGG + chr4_1:50184213-50184232 None:intergenic 40.0%
CTGACATGTCATTACAGGAA+TGG + chr4_1:50184246-50184265 None:intergenic 40.0%
TCCTGTAATGACATGTCAGT+TGG - chr4_1:50184247-50184266 Msa0553240:CDS 40.0%
TCCAACTGACATGTCATTAC+AGG + chr4_1:50184251-50184270 None:intergenic 40.0%
ACTAAGCTGGTCAATGTTTC+GGG - chr4_1:50184274-50184293 Msa0553240:CDS 40.0%
CGATAATTTGAGCATGGAGT+TGG - chr4_1:50184383-50184402 Msa0553240:CDS 40.0%
! AAGCTTCCTTTTCACAAGCT+TGG + chr4_1:50184429-50184448 None:intergenic 40.0%
CTATCATCGCCGGAGTTTAA+CGG + chr4_1:50175722-50175741 None:intergenic 45.0%
AACCTTATCGGATCCTACGA+CGG + chr4_1:50175897-50175916 None:intergenic 45.0%
GAATCTCAAAATCGGAACCG+AGG - chr4_1:50175961-50175980 Msa0553240:three_prime_UTR 45.0%
AAAATCGGAACCGAGGGTTT+CGG - chr4_1:50175968-50175987 Msa0553240:three_prime_UTR 45.0%
! AGCTTGCTCATCATTGCTTC+GGG + chr4_1:50176007-50176026 None:intergenic 45.0%
! CAGCTTGCTCATCATTGCTT+CGG + chr4_1:50176008-50176027 None:intergenic 45.0%
TTCGTGTTGAATCGGAGCTT+GGG - chr4_1:50176056-50176075 Msa0553240:three_prime_UTR 45.0%
! ATCCTCGTCAGGTTTAGGTT+CGG - chr4_1:50176258-50176277 Msa0553240:CDS 45.0%
CAGAGTAAACCAGAAGCTTC+GGG - chr4_1:50176331-50176350 Msa0553240:CDS 45.0%
AAATTCGATCCCGAAGCTTC+TGG + chr4_1:50176343-50176362 None:intergenic 45.0%
CCGAAGATTGGTGGAAAAGA+AGG - chr4_1:50176385-50176404 Msa0553240:intron 45.0%
TTTGCAAGAAGATCGTCCTC+AGG - chr4_1:50176528-50176547 Msa0553240:intron 45.0%
TTGCAAGAAGATCGTCCTCA+GGG - chr4_1:50176529-50176548 Msa0553240:intron 45.0%
TAGCTGAGAGTCGAACATCA+AGG - chr4_1:50176602-50176621 Msa0553240:intron 45.0%
AGCTGAGAGTCGAACATCAA+GGG - chr4_1:50176603-50176622 Msa0553240:intron 45.0%
GTCAACACGAAGTGACTCAT+TGG + chr4_1:50176644-50176663 None:intergenic 45.0%
ATGAGAGTAGTGAAGTTGCG+AGG - chr4_1:50176743-50176762 Msa0553240:intron 45.0%
TGAGAGTAGTGAAGTTGCGA+GGG - chr4_1:50176744-50176763 Msa0553240:intron 45.0%
AGTTGCGAGGGAAGATAGAA+AGG - chr4_1:50176756-50176775 Msa0553240:intron 45.0%
GGAAGAGACAAAGGATGAGT+CGG - chr4_1:50176822-50176841 Msa0553240:CDS 45.0%
! ACAAAGGATGAGTCGGTTTC+TGG - chr4_1:50176829-50176848 Msa0553240:CDS 45.0%
! CAAAGGATGAGTCGGTTTCT+GGG - chr4_1:50176830-50176849 Msa0553240:CDS 45.0%
! AAAGGATGAGTCGGTTTCTG+GGG - chr4_1:50176831-50176850 Msa0553240:CDS 45.0%
GGCTTCAGATTCAGCATCAT+CGG + chr4_1:50176902-50176921 None:intergenic 45.0%
! ACGAGAAATGAAAGTGTGCG+TGG - chr4_1:50176952-50176971 Msa0553240:intron 45.0%
! CGAGAAATGAAAGTGTGCGT+GGG - chr4_1:50176953-50176972 Msa0553240:intron 45.0%
CAACTACGCGCCAAACATAA+AGG - chr4_1:50177080-50177099 Msa0553240:intron 45.0%
AGTTGCAAATGGCACAGATG+GGG + chr4_1:50177118-50177137 None:intergenic 45.0%
GAGTTGCAAATGGCACAGAT+GGG + chr4_1:50177119-50177138 None:intergenic 45.0%
AGAGTTGCAAATGGCACAGA+TGG + chr4_1:50177120-50177139 None:intergenic 45.0%
!! GTGCCATTTGCAACTCTTAC+TGG - chr4_1:50177123-50177142 Msa0553240:intron 45.0%
GGGAAGCCTAATATTGTGTC+AGG - chr4_1:50177144-50177163 Msa0553240:intron 45.0%
!!! GAAACCCTTGTTTTGGGTTG+AGG + chr4_1:50177198-50177217 None:intergenic 45.0%
CAACCCAAAACAAGGGTTTC+TGG - chr4_1:50177198-50177217 Msa0553240:intron 45.0%
!! CACACCAGAAACCCTTGTTT+TGG + chr4_1:50177205-50177224 None:intergenic 45.0%
!! AAGGGTTTCTGGTGTGAATG+AGG - chr4_1:50177209-50177228 Msa0553240:intron 45.0%
ATGGCATCGTTTGATCCATG+TGG - chr4_1:50177471-50177490 Msa0553240:intron 45.0%
ATGTGGACGACCCACTTAAT+GGG - chr4_1:50177488-50177507 Msa0553240:intron 45.0%
GGAAACCAAGCCTACAAGAA+CGG - chr4_1:50177697-50177716 Msa0553240:intron 45.0%
GAAACCAAGCCTACAAGAAC+GGG - chr4_1:50177698-50177717 Msa0553240:intron 45.0%
AAACCAAGCCTACAAGAACG+GGG - chr4_1:50177699-50177718 Msa0553240:intron 45.0%
AGACAAATCCCCGTTCTTGT+AGG + chr4_1:50177710-50177729 None:intergenic 45.0%
CAAGAACGGGGATTTGTCTA+TGG - chr4_1:50177711-50177730 Msa0553240:intron 45.0%
CTCCGAGATGCTTGTTCTTT+AGG + chr4_1:50177772-50177791 None:intergenic 45.0%
GCTGCTATGTTATAGCAACC+TGG - chr4_1:50177807-50177826 Msa0553240:intron 45.0%
TGAGCCCACATTTACATTCG+AGG + chr4_1:50178054-50178073 None:intergenic 45.0%
! CTGTGCCTTTTGTAAGCCAT+CGG + chr4_1:50178552-50178571 None:intergenic 45.0%
TGATGCCCAAAGTCCAACAT+TGG + chr4_1:50178974-50178993 None:intergenic 45.0%
!!! GGCATCACTAGGTTGCTTTT+GGG - chr4_1:50178987-50179006 Msa0553240:intron 45.0%
!!! GCATCACTAGGTTGCTTTTG+GGG - chr4_1:50178988-50179007 Msa0553240:intron 45.0%
!!! CATCACTAGGTTGCTTTTGG+GGG - chr4_1:50178989-50179008 Msa0553240:intron 45.0%
!!! ATCACTAGGTTGCTTTTGGG+GGG - chr4_1:50178990-50179009 Msa0553240:intron 45.0%
!!! TGCTTTTGGGGGGTATTGTA+AGG - chr4_1:50179000-50179019 Msa0553240:intron 45.0%
TGAAAACATGGCCCTGCTTT+AGG - chr4_1:50179040-50179059 Msa0553240:intron 45.0%
GGGGCCGTACTAATATAGAT+AGG - chr4_1:50179128-50179147 Msa0553240:intron 45.0%
AACATCCTCTGATGCAGAGA+GGG - chr4_1:50179402-50179421 Msa0553240:intron 45.0%
TCAGCTGAGTAGATATGAGG+AGG - chr4_1:50179715-50179734 Msa0553240:intron 45.0%
AATGCTTGTCCAATTGCTGC+TGG - chr4_1:50179779-50179798 Msa0553240:intron 45.0%
TCACCTAGGAAAGCTTGAAG+AGG - chr4_1:50179892-50179911 Msa0553240:intron 45.0%
CACCTAGGAAAGCTTGAAGA+GGG - chr4_1:50179893-50179912 Msa0553240:intron 45.0%
TGAAGAGGGTCTTTCTTTGC+TGG - chr4_1:50179907-50179926 Msa0553240:intron 45.0%
!! GAGGAGTGTGAATGGGTTAT+AGG + chr4_1:50179981-50180000 None:intergenic 45.0%
TATCAGCTTGCCCGAGATTT+GGG + chr4_1:50180007-50180026 None:intergenic 45.0%
TTATCAGCTTGCCCGAGATT+TGG + chr4_1:50180008-50180027 None:intergenic 45.0%
AAATCTCGGGCAAGCTGATA+AGG - chr4_1:50180007-50180026 Msa0553240:intron 45.0%
! AGCTTTGATACTGTCCTTGC+AGG - chr4_1:50180073-50180092 Msa0553240:CDS 45.0%
GGAGAAAATGTCTCCAACCA+TGG - chr4_1:50180548-50180567 Msa0553240:intron 45.0%
AATGTCTCCAACCATGGAAC+AGG - chr4_1:50180554-50180573 Msa0553240:intron 45.0%
TCAGAATCCTGTTCCATGGT+TGG + chr4_1:50180564-50180583 None:intergenic 45.0%
CCTATCAGAATCCTGTTCCA+TGG + chr4_1:50180568-50180587 None:intergenic 45.0%
CCATGGAACAGGATTCTGAT+AGG - chr4_1:50180565-50180584 Msa0553240:intron 45.0%
TGATAGGGACCTGGGTATTA+TGG - chr4_1:50180581-50180600 Msa0553240:intron 45.0%
GATAGGGACCTGGGTATTAT+GGG - chr4_1:50180582-50180601 Msa0553240:intron 45.0%
ATAGGGACCTGGGTATTATG+GGG - chr4_1:50180583-50180602 Msa0553240:intron 45.0%
TTGGATACCCCATAATACCC+AGG + chr4_1:50180593-50180612 None:intergenic 45.0%
GCATCCCATACTACTCAAAG+TGG - chr4_1:50180699-50180718 Msa0553240:intron 45.0%
GTGGGGACTAGGATATTATG+GGG + chr4_1:50180773-50180792 None:intergenic 45.0%
GGTGGGGACTAGGATATTAT+GGG + chr4_1:50180774-50180793 None:intergenic 45.0%
TGGTGGGGACTAGGATATTA+TGG + chr4_1:50180775-50180794 None:intergenic 45.0%
TTATGAATCTGGTGGGGACT+AGG + chr4_1:50180784-50180803 None:intergenic 45.0%
!! TGAGTACTGATGAGTGAGGA+TGG - chr4_1:50181083-50181102 Msa0553240:intron 45.0%
TTGTACAGGCCCATTCCAAT+AGG - chr4_1:50181112-50181131 Msa0553240:intron 45.0%
TGCAGGGAATGAAGCATATC+AGG - chr4_1:50181384-50181403 Msa0553240:intron 45.0%
! GCCGCTGCATATAAAGTGTT+AGG - chr4_1:50181502-50181521 Msa0553240:intron 45.0%
AGTCTGGCTATAGCTCTTGA+TGG - chr4_1:50181553-50181572 Msa0553240:intron 45.0%
GTCTGGCTATAGCTCTTGAT+GGG - chr4_1:50181554-50181573 Msa0553240:intron 45.0%
TCTCTCTCTTCTCAGTAAGG+GGG - chr4_1:50181986-50182005 Msa0553240:intron 45.0%
TCTGTCTTCTTCCTCTAGCT+CGG + chr4_1:50182096-50182115 None:intergenic 45.0%
GCTAGAGGAAGAAGACAGAA+AGG - chr4_1:50182097-50182116 Msa0553240:intron 45.0%
CTGTACACACAATCCGTTTG+AGG - chr4_1:50182276-50182295 Msa0553240:intron 45.0%
! CGGTGGCACTTTCTTGTTTA+CGG + chr4_1:50182579-50182598 None:intergenic 45.0%
TCACTACAATGATGTGGCTG+TGG + chr4_1:50182602-50182621 None:intergenic 45.0%
CAGCCACATCATTGTAGTGA+AGG - chr4_1:50182602-50182621 Msa0553240:intron 45.0%
TACCTCGAAGTGTGCACTAA+TGG - chr4_1:50182733-50182752 Msa0553240:intron 45.0%
TTCCATTAGTGCACACTTCG+AGG + chr4_1:50182738-50182757 None:intergenic 45.0%
!! GGCAATGCATACACTGACTT+TGG - chr4_1:50182765-50182784 Msa0553240:intron 45.0%
TCGTCATTCCACATGTGTTG+TGG - chr4_1:50183043-50183062 Msa0553240:CDS 45.0%
CTGATTGACGTTGTGATTGC+AGG - chr4_1:50183151-50183170 Msa0553240:CDS 45.0%
GATTGACGTTGTGATTGCAG+GGG - chr4_1:50183153-50183172 Msa0553240:CDS 45.0%
!! ACCATGGAGATGATGGGATA+TGG - chr4_1:50183355-50183374 Msa0553240:CDS 45.0%
TCCATATCCCATCATCTCCA+TGG + chr4_1:50183359-50183378 None:intergenic 45.0%
!! TGGAGATGATGGGATATGGA+AGG - chr4_1:50183359-50183378 Msa0553240:CDS 45.0%
CTTCAAGGACTTCACAGGAT+TGG + chr4_1:50183567-50183586 None:intergenic 45.0%
ATCCTGTGAAGTCCTTGAAG+TGG - chr4_1:50183567-50183586 Msa0553240:CDS 45.0%
CTCTCTCCAATGTCTCCTAT+TGG + chr4_1:50183964-50183983 None:intergenic 45.0%
CAATAGGAGACATTGGAGAG+AGG - chr4_1:50183962-50183981 Msa0553240:CDS 45.0%
ACTGCAATCCAGAACCTAAC+TGG + chr4_1:50184060-50184079 None:intergenic 45.0%
CTGGATTGCAGTATAAGTCG+TGG - chr4_1:50184068-50184087 Msa0553240:CDS 45.0%
TCGTGGAATGTGACCTTGTT+AGG - chr4_1:50184091-50184110 Msa0553240:CDS 45.0%
TGGAATGTGACCTTGTTAGG+TGG - chr4_1:50184094-50184113 Msa0553240:CDS 45.0%
!!! TGAGTTTTGAAGAGGTGTGC+AGG - chr4_1:50184214-50184233 Msa0553240:CDS 45.0%
GCTGACCGATAATTTGAGCA+TGG - chr4_1:50184377-50184396 Msa0553240:CDS 45.0%
!! ATGGAGTTGGTGTGTTGACT+TGG - chr4_1:50184396-50184415 Msa0553240:CDS 45.0%
!! ATTAAAAATAATTAACAAAA+AGG + chr4_1:50178644-50178663 None:intergenic 5.0%
!! AACAAAAATTAAAATATAAA+TGG + chr4_1:50180206-50180225 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTTG+AGG - chr4_1:50180725-50180744 Msa0553240:CDS 5.0%
GTCGGAGAATCTATCATCGC+CGG + chr4_1:50175732-50175751 None:intergenic 50.0%
TGTGAAGGTGAAAGGTGACG+TGG + chr4_1:50175759-50175778 None:intergenic 50.0%
TTGCGAAGCTTCACGAAACG+CGG + chr4_1:50175818-50175837 None:intergenic 50.0%
GGTACCGTCGCGATTGAAAA+CGG + chr4_1:50175855-50175874 None:intergenic 50.0%
ATCGGATCCTACGACGGTTA+CGG + chr4_1:50175891-50175910 None:intergenic 50.0%
AACCGTCGTAGGATCCGATA+AGG - chr4_1:50175892-50175911 Msa0553240:three_prime_UTR 50.0%
GTTCGTGTTGAATCGGAGCT+TGG - chr4_1:50176055-50176074 Msa0553240:three_prime_UTR 50.0%
ATGCCATCCTCGTCAGGTTT+AGG - chr4_1:50176253-50176272 Msa0553240:CDS 50.0%
GAACCTAAACCTGACGAGGA+TGG + chr4_1:50176259-50176278 None:intergenic 50.0%
! TCCTCGTCAGGTTTAGGTTC+GGG - chr4_1:50176259-50176278 Msa0553240:CDS 50.0%
AAATCGCATGGGCCGAAGAT+TGG - chr4_1:50176373-50176392 Msa0553240:intron 50.0%
CACCTGTGCAAGGTTGGAAT+GGG - chr4_1:50176479-50176498 Msa0553240:intron 50.0%
GTGTGAGAGTTGTTCGCCAA+TGG - chr4_1:50176555-50176574 Msa0553240:intron 50.0%
TGAGAGTTGTTCGCCAATGG+AGG - chr4_1:50176558-50176577 Msa0553240:intron 50.0%
TGCGAGGGAAGATAGAAAGG+AGG - chr4_1:50176759-50176778 Msa0553240:intron 50.0%
GCGAAATCGGAGTGTGGTAT+AGG - chr4_1:50176781-50176800 Msa0553240:CDS 50.0%
! AATGAAAGTGTGCGTGGGTC+TGG - chr4_1:50176958-50176977 Msa0553240:intron 50.0%
AGCAGAAGAAGCAGCTGCAA+AGG + chr4_1:50176989-50177008 None:intergenic 50.0%
GGCACAGATGGGGATGAATA+AGG + chr4_1:50177108-50177127 None:intergenic 50.0%
GGGTTGAGGAAAAGACACTC+TGG + chr4_1:50177184-50177203 None:intergenic 50.0%
CTGCCGAAGCATGTGAAAAG+TGG - chr4_1:50177265-50177284 Msa0553240:intron 50.0%
!!! GCGCCACTTTTCACATGCTT+CGG + chr4_1:50177271-50177290 None:intergenic 50.0%
CATTAAGTGGGTCGTCCACA+TGG + chr4_1:50177489-50177508 None:intergenic 50.0%
CATGTGGACGACCCACTTAA+TGG - chr4_1:50177487-50177506 Msa0553240:intron 50.0%
AATCCCCGTTCTTGTAGGCT+TGG + chr4_1:50177705-50177724 None:intergenic 50.0%
CCTACCAAGAGACATGTGTG+TGG + chr4_1:50177836-50177855 None:intergenic 50.0%
CCACACACATGTCTCTTGGT+AGG - chr4_1:50177833-50177852 Msa0553240:intron 50.0%
ATTTCAGTGGAAGCCTCCGA+TGG - chr4_1:50178533-50178552 Msa0553240:intron 50.0%
AGCCTCCGATGGCTTACAAA+AGG - chr4_1:50178544-50178563 Msa0553240:intron 50.0%
! TGCCTTTTGTAAGCCATCGG+AGG + chr4_1:50178549-50178568 None:intergenic 50.0%
! CGATGGCTTACAAAAGGCAC+AGG - chr4_1:50178550-50178569 Msa0553240:intron 50.0%
GTTGGACTTTGGGCATCACT+AGG - chr4_1:50178976-50178995 Msa0553240:intron 50.0%
!! GGGCATCACTAGGTTGCTTT+TGG - chr4_1:50178986-50179005 Msa0553240:intron 50.0%
AATCAGTTAGGAAGAGGGGG+TGG + chr4_1:50179314-50179333 None:intergenic 50.0%
GAACATCCTCTGATGCAGAG+AGG - chr4_1:50179401-50179420 Msa0553240:intron 50.0%
ACTTGGCAACCAGCAGCAAT+TGG + chr4_1:50179791-50179810 None:intergenic 50.0%
GACCCTCTTCAAGCTTTCCT+AGG + chr4_1:50179898-50179917 None:intergenic 50.0%
! TGGGGAAGAGGAGTGTGAAT+GGG + chr4_1:50179988-50180007 None:intergenic 50.0%
! TTGGGGAAGAGGAGTGTGAA+TGG + chr4_1:50179989-50180008 None:intergenic 50.0%
CACTCCTCTTCCCCAAATCT+CGG - chr4_1:50179993-50180012 Msa0553240:intron 50.0%
ACTCCTCTTCCCCAAATCTC+GGG - chr4_1:50179994-50180013 Msa0553240:intron 50.0%
ATCAGCTTGCCCGAGATTTG+GGG + chr4_1:50180006-50180025 None:intergenic 50.0%
TGATACTGTCCTTGCAGGAG+TGG - chr4_1:50180078-50180097 Msa0553240:CDS 50.0%
! CAGGAGTGGAAGCAAGGTTT+TGG - chr4_1:50180092-50180111 Msa0553240:CDS 50.0%
ACGCGAGCTCTTGCATCATA+AGG - chr4_1:50180143-50180162 Msa0553240:intron 50.0%
! GGTTGGAGACATTTTCTCCC+CGG + chr4_1:50180547-50180566 None:intergenic 50.0%
ACAGGATTCTGATAGGGACC+TGG - chr4_1:50180572-50180591 Msa0553240:intron 50.0%
CAGGATTCTGATAGGGACCT+GGG - chr4_1:50180573-50180592 Msa0553240:intron 50.0%
GAGTAGTATGGGATGCTTGG+TGG + chr4_1:50180695-50180714 None:intergenic 50.0%
GAGTAGAGAAGCAAGGTGGA+AGG + chr4_1:50181195-50181214 None:intergenic 50.0%
GGGAATGAAGCATATCAGGC+TGG - chr4_1:50181388-50181407 Msa0553240:intron 50.0%
TGCAATCGCAGATTGCAGTC+TGG - chr4_1:50181537-50181556 Msa0553240:intron 50.0%
AACTGAATCAGACGGGGTTC+AGG - chr4_1:50181642-50181661 Msa0553240:intron 50.0%
CAGAGGTTGCAAGAACACAG+TGG + chr4_1:50181754-50181773 None:intergenic 50.0%
GAGAAGTCTCCTGAGATCAC+TGG + chr4_1:50181970-50181989 None:intergenic 50.0%
TCTTCTCAGTAAGGGGGTAG+AGG - chr4_1:50181992-50182011 Msa0553240:intron 50.0%
CTACAATGATGTGGCTGTGG+CGG + chr4_1:50182599-50182618 None:intergenic 50.0%
ATACCTTTGCAGGGTCTGAC+AGG + chr4_1:50183452-50183471 None:intergenic 50.0%
!! ACTTCACAGGATTGGCTCCA+TGG + chr4_1:50183559-50183578 None:intergenic 50.0%
CACCACTTCAAGGACTTCAC+AGG + chr4_1:50183572-50183591 None:intergenic 50.0%
GGAGACATTGGAGAGAGGTT+TGG - chr4_1:50183967-50183986 Msa0553240:CDS 50.0%
CTGAAACTGGTCGACCAAGT+AGG - chr4_1:50184006-50184025 Msa0553240:CDS 50.0%
TGCAGTATAAGTCGTGGTCG+TGG - chr4_1:50184074-50184093 Msa0553240:CDS 50.0%
!!! GTTTTGAAGAGGTGTGCAGG+AGG - chr4_1:50184217-50184236 Msa0553240:CDS 50.0%
GTCAGTTGGAGCAACTAAGC+TGG - chr4_1:50184261-50184280 Msa0553240:CDS 50.0%
!! TGGTCAATGTTTCGGGTTGC+TGG - chr4_1:50184281-50184300 Msa0553240:CDS 50.0%
!! GGTCAATGTTTCGGGTTGCT+GGG - chr4_1:50184282-50184301 Msa0553240:CDS 50.0%
! GAAAGGTGACGTGGAAGCGT+CGG + chr4_1:50175750-50175769 None:intergenic 55.0%
GAGGCGGTTGTGAAGGTGAA+AGG + chr4_1:50175767-50175786 None:intergenic 55.0%
! TCACGAAACGCGGCTTGGAA+AGG + chr4_1:50175808-50175827 None:intergenic 55.0%
AAGCTTCACGAAACGCGGCT+TGG + chr4_1:50175813-50175832 None:intergenic 55.0%
! GCCTCCGTTTTCAATCGCGA+CGG - chr4_1:50175848-50175867 Msa0553240:three_prime_UTR 55.0%
ACCGTCGCGATTGAAAACGG+AGG + chr4_1:50175852-50175871 None:intergenic 55.0%
TCTGCAATGCCATCCTCGTC+AGG - chr4_1:50176247-50176266 Msa0553240:CDS 55.0%
ACCCGAACCTAAACCTGACG+AGG + chr4_1:50176263-50176282 None:intergenic 55.0%
TTCCAACCTTGCACAGGTGC+CGG + chr4_1:50176478-50176497 None:intergenic 55.0%
GCACCTGTGCAAGGTTGGAA+TGG - chr4_1:50176478-50176497 Msa0553240:intron 55.0%
TGCCCATTCCAACCTTGCAC+AGG + chr4_1:50176484-50176503 None:intergenic 55.0%
GTGCAAGGTTGGAATGGGCA+TGG - chr4_1:50176484-50176503 Msa0553240:intron 55.0%
CAACTCTCACACGAACCCTG+AGG + chr4_1:50176547-50176566 None:intergenic 55.0%
AAGGAGGCGAAATCGGAGTG+TGG - chr4_1:50176775-50176794 Msa0553240:CDS 55.0%
! GCTGAATCTGAAGCCCGTGA+TGG - chr4_1:50176907-50176926 Msa0553240:intron 55.0%
CATGTGAAAAGTGGCGCCTC+CGG - chr4_1:50177274-50177293 Msa0553240:intron 55.0%
AAGCATCTCGGAGCTGTCTC+AGG - chr4_1:50177779-50177798 Msa0553240:intron 55.0%
AGCATCTCGGAGCTGTCTCA+GGG - chr4_1:50177780-50177799 Msa0553240:intron 55.0%
GCTGCCACACACATGTCTCT+TGG - chr4_1:50177829-50177848 Msa0553240:intron 55.0%
GTGGTTGAATACGGCAGCTG+TGG + chr4_1:50178843-50178862 None:intergenic 55.0%
CAATGCCCTCTCTGCATCAG+AGG + chr4_1:50179410-50179429 None:intergenic 55.0%
! CTCTGATGCAGAGAGGGCAT+TGG - chr4_1:50179408-50179427 Msa0553240:intron 55.0%
TTGCCCGAGATTTGGGGAAG+AGG + chr4_1:50180000-50180019 None:intergenic 55.0%
TCCTTGCAGGAGTGGAAGCA+AGG - chr4_1:50180086-50180105 Msa0553240:CDS 55.0%
ACCTTGCTTCCACTCCTGCA+AGG + chr4_1:50180090-50180109 None:intergenic 55.0%
ATGCAAGAGCTCGCGTACAG+TGG + chr4_1:50180139-50180158 None:intergenic 55.0%
GAGGTCTCGAAATGGGGACT+TGG - chr4_1:50180744-50180763 Msa0553240:CDS 55.0%
! CCTGAGATCACTGGCTGCTT+GGG + chr4_1:50181961-50181980 None:intergenic 55.0%
! TCCTGAGATCACTGGCTGCT+TGG + chr4_1:50181962-50181981 None:intergenic 55.0%
TGTCCTGTCAGACCCTGCAA+AGG - chr4_1:50183446-50183465 Msa0553240:CDS 55.0%
AATTCCCAAAAGCGACGCCC+TGG - chr4_1:50183882-50183901 Msa0553240:CDS 55.0%
!!! ACTTCCAGGGCGTCGCTTTT+GGG + chr4_1:50183889-50183908 None:intergenic 55.0%
!!! TACTTCCAGGGCGTCGCTTT+TGG + chr4_1:50183890-50183909 None:intergenic 55.0%
AAAGCGACGCCCTGGAAGTA+TGG - chr4_1:50183890-50183909 Msa0553240:CDS 55.0%
! AAGCGACGCCCTGGAAGTAT+GGG - chr4_1:50183891-50183910 Msa0553240:CDS 55.0%
CTTGGAAAGGCCGGAAACGG+AGG + chr4_1:50175795-50175814 None:intergenic 60.0%
! CGGCTTGGAAAGGCCGGAAA+CGG + chr4_1:50175798-50175817 None:intergenic 60.0%
! GAAACGCGGCTTGGAAAGGC+CGG + chr4_1:50175804-50175823 None:intergenic 60.0%
TACGACGGTTACGGCGGCAT+TGG + chr4_1:50175882-50175901 None:intergenic 60.0%
AATGCCGCCGTAACCGTCGT+AGG - chr4_1:50175881-50175900 Msa0553240:three_prime_UTR 60.0%
GGATCCTACGACGGTTACGG+CGG + chr4_1:50175888-50175907 None:intergenic 60.0%
CGCAGCGTTACCGAAACCCT+CGG + chr4_1:50175981-50176000 None:intergenic 60.0%
TCGCATGGGCCGAAGATTGG+TGG - chr4_1:50176376-50176395 Msa0553240:intron 60.0%
TCTACACCGGCACCTGTGCA+AGG - chr4_1:50176469-50176488 Msa0553240:intron 60.0%
GAGACATGTGTGTGGCAGCC+AGG + chr4_1:50177828-50177847 None:intergenic 60.0%
GGCAGCTGTGGCTGCAAATG+TGG + chr4_1:50178831-50178850 None:intergenic 60.0%
TCGCGTACAGTGGCAGCTAG+TGG + chr4_1:50180129-50180148 None:intergenic 60.0%
CCCAAGCAGCCAGTGATCTC+AGG - chr4_1:50181958-50181977 Msa0553240:intron 60.0%
CATTCGGCTCTCCGAGCTAG+AGG - chr4_1:50182082-50182101 Msa0553240:intron 60.0%
CAATGATGTGGCTGTGGCGG+TGG + chr4_1:50182596-50182615 None:intergenic 60.0%
GGCGGAAGAGGCGGTTGTGA+AGG + chr4_1:50175774-50175793 None:intergenic 65.0%
GGAAACGGAGGCGGAAGAGG+CGG + chr4_1:50175783-50175802 None:intergenic 65.0%
GCCTCTTCCGCCTCCGTTTC+CGG - chr4_1:50175782-50175801 Msa0553240:three_prime_UTR 65.0%
GGAAAGGCCGGAAACGGAGG+CGG + chr4_1:50175792-50175811 None:intergenic 65.0%
!! GGTTACGGCGGCATTGGCGA+CGG + chr4_1:50175876-50175895 None:intergenic 65.0%
CACCGGCACCTGTGCAAGGT+TGG - chr4_1:50176473-50176492 Msa0553240:intron 65.0%
GCCGGAAACGGAGGCGGAAG+AGG + chr4_1:50175786-50175805 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 50175591 50184638 50175591 ID=Msa0553240;Name=Msa0553240
chr4_1 mRNA 50175591 50184638 50175591 ID=Msa0553240-mRNA-1;Parent=Msa0553240;Name=Msa0553240-mRNA-1;_AED=0.02;_eAED=0.02;_QI=122|1|1|1|1|1|11|604|1088
chr4_1 exon 50175591 50176380 50175591 ID=Msa0553240-mRNA-1:exon:14212;Parent=Msa0553240-mRNA-1
chr4_1 exon 50176762 50176899 50176762 ID=Msa0553240-mRNA-1:exon:14211;Parent=Msa0553240-mRNA-1
chr4_1 exon 50176978 50177056 50176978 ID=Msa0553240-mRNA-1:exon:14210;Parent=Msa0553240-mRNA-1
chr4_1 exon 50178082 50178317 50178082 ID=Msa0553240-mRNA-1:exon:14209;Parent=Msa0553240-mRNA-1
chr4_1 exon 50178641 50178847 50178641 ID=Msa0553240-mRNA-1:exon:14208;Parent=Msa0553240-mRNA-1
chr4_1 exon 50180065 50180134 50180065 ID=Msa0553240-mRNA-1:exon:14207;Parent=Msa0553240-mRNA-1
chr4_1 exon 50180266 50180510 50180266 ID=Msa0553240-mRNA-1:exon:14206;Parent=Msa0553240-mRNA-1
chr4_1 exon 50180722 50180874 50180722 ID=Msa0553240-mRNA-1:exon:14205;Parent=Msa0553240-mRNA-1
chr4_1 exon 50181658 50181787 50181658 ID=Msa0553240-mRNA-1:exon:14204;Parent=Msa0553240-mRNA-1
chr4_1 exon 50182294 50182533 50182294 ID=Msa0553240-mRNA-1:exon:14203;Parent=Msa0553240-mRNA-1
chr4_1 exon 50182934 50184638 50182934 ID=Msa0553240-mRNA-1:exon:14202;Parent=Msa0553240-mRNA-1
chr4_1 five_prime_UTR 50184517 50184638 50184517 ID=Msa0553240-mRNA-1:five_prime_utr;Parent=Msa0553240-mRNA-1
chr4_1 CDS 50182934 50184516 50182934 ID=Msa0553240-mRNA-1:cds;Parent=Msa0553240-mRNA-1
chr4_1 CDS 50182294 50182533 50182294 ID=Msa0553240-mRNA-1:cds;Parent=Msa0553240-mRNA-1
chr4_1 CDS 50181658 50181787 50181658 ID=Msa0553240-mRNA-1:cds;Parent=Msa0553240-mRNA-1
chr4_1 CDS 50180722 50180874 50180722 ID=Msa0553240-mRNA-1:cds;Parent=Msa0553240-mRNA-1
chr4_1 CDS 50180266 50180510 50180266 ID=Msa0553240-mRNA-1:cds;Parent=Msa0553240-mRNA-1
chr4_1 CDS 50180065 50180134 50180065 ID=Msa0553240-mRNA-1:cds;Parent=Msa0553240-mRNA-1
chr4_1 CDS 50178641 50178847 50178641 ID=Msa0553240-mRNA-1:cds;Parent=Msa0553240-mRNA-1
chr4_1 CDS 50178082 50178317 50178082 ID=Msa0553240-mRNA-1:cds;Parent=Msa0553240-mRNA-1
chr4_1 CDS 50176978 50177056 50176978 ID=Msa0553240-mRNA-1:cds;Parent=Msa0553240-mRNA-1
chr4_1 CDS 50176762 50176899 50176762 ID=Msa0553240-mRNA-1:cds;Parent=Msa0553240-mRNA-1
chr4_1 CDS 50176195 50176380 50176195 ID=Msa0553240-mRNA-1:cds;Parent=Msa0553240-mRNA-1
chr4_1 three_prime_UTR 50175591 50176194 50175591 ID=Msa0553240-mRNA-1:three_prime_utr;Parent=Msa0553240-mRNA-1
Gene Sequence

>Msa0553240

ATGGAACCGTTAAACTCCGGCGATGATAGATTCTCCGACGCTTCCACGTCACCTTTCACCTTCACAACCGCCTCTTCCGCCTCCGTTTCCGGCCTTTCCAAGCCGCGTTTCGTGAAGCTTCGCAAACACAACAATGCCTCCGTTTTCAATCGCGACGGTACCGTCGCCAATGCCGCCGTAACCGTCGTAGGATCCGATAAGGTTGATTCGGCTTTGAATTTTGATAAACGGATCAGTGATCGGTTGAAGAATCTCAAAATCGGAACCGAGGGTTTCGGTAACGCTGCGATTCCCGAAGCAATGATGAGCAAGCTGAATATTTCAACGGAAGGTTTTGATAAGGTTCGTGTTGAATCGGAGCTTGGGAACGAGTTGAAGAAGAAACTCAGCATTGGAGAAAATGAAGGAGGTAACAATGTAGAGGATTCGGCAAATTCCGTTATTCGGCAATTGAATAATTTGAATGTGAATGATGTAATGAATAAAAAGTTTAACCTAGTTGATCAGAATTTTGAACCTAATTTATGTAATTCTTCTGCAATGCCATCCTCGTCAGGTTTAGGTTCGGGTTCTGTGTTATTTCAACCTTTTGAAGTTAAGAAGGATCAATTTGTGTTTCAGAGTAAACCAGAAGCTTCGGGATCGAATTTTGTTGAGTTTAAATCGCATGGGCCGAAGATTGGTGGAAAAGAAGGAAAATTGAAGGAGAAAAGTGGGAATGTGAAGATGAATAGAAGTAGAGTGAATTTGAAGCATTCTACACCGGCACCTGTGCAAGGTTGGAATGGGCATGGTTTTGTTTTTAAAGGAAGTGTTTTGCAAGAAGATCGTCCTCAGGGTTCGTGTGAGAGTTGTTCGCCAATGGAGGTTTCTCCTTATCAGGAAAAACTAGCTGAGAGTCGAACATCAAGGGAAAGTTCTGTGAATTCCAATGAGTCACTTCGTGTTGACGCTGAAGATTCTGTACCGATGAATTTTGTTGATCACATTGATGAAGATTTGATTGGGGCGACTGAGAAAATGAATATAAATGAGAGTAGTGAAGTTGCGAGGGAAGATAGAAAGGAGGCGAAATCGGAGTGTGGTATAGGTGAAAATATTTGTGTTGAGGAAGAGACAAAGGATGAGTCGGTTTCTGGGGTTGAAACTGAAAGCTTTAAGTCTGCTAGTGATAGTGTGGACGTGACCGATGATGCTGAATCTGAAGCCCGTGATGGTGATAGAATGTTGAATTTTGGTACGAGAAATGAAAGTGTGCGTGGGTCTGGCTTCACCTTTGCAGCTGCTTCTTCTGCTGAAGCTCAATTGTCTAGCCCAAAACGCCCTAACAAAAAGAAAACTTGGGTAAATGTTGGTCATGATTCTTACAACTACGCGCCAAACATAAAGGTTCCTTATTCATCCCCATCTGTGCCATTTGCAACTCTTACTGGGAAGCCTAATATTGTGTCAGGGCAAGACATAAAAGCCAGAGTGTCTTTTCCTCAACCCAAAACAAGGGTTTCTGGTGTGAATGAGGATCACAAATTAAGGGAGGATTCTGCTTCTGTTTCTGCCGAAGCATGTGAAAAGTGGCGCCTCCGAGGAAACCAAGCCTACAAGAACGGGGATTTGTCTATGGCTGAGAGTTATTACAAACAAGGACTTGGTTGTGTACCTAAAGAACAAGCATCTCGGAGCTGTCTCAGGGCTTTGCTGCTATGTTATAGCAACCTGGCTGCCACACACATGTCTCTTGGTAGGATGAGAGATGCAATAGAAGATTGTAGGCTGGCTGCTGAAATAGATCAAAATTTTCTCAAGGTGCAACTTAGAGCTGCAAATTGTTATCTTGCTCTGGGAGAAGTTGAAGCTGCATCACAATATTTCAAAATGTGCTTGCAATCAGGAGCTGATGTTTCTGTAGATCGTAAGATTTCAGTGGAAGCCTCCGATGGCTTACAAAAGGCACAGAAAGTATCAGATTCTATTTATCATTCTGCTGAGCTTTTGCAAAGAAGAACATCCTCTGATGCAGAGAGGGCATTGGAACATATTAATGAGGCGTTGATGATCAGTATGCACTCTGAAAAATTGCTTGAAATGAAAGCAGAAGCTCTTTTAATGCTGAGTAGATATGAGGAGGTGATTCATCAGTGTGACAAGACTCTTAGTTCTGCTGAGAAGAATGCTTGTCCAATTGCTGCTGGTTGCCAAGTCACATATATGGATATTTCAGAACTCTCAAAAGTTGTCTACTTCAGACTATGGAGGTGTTCAATGATGCTTAAAGCCTACTTTCACCTAGGAAAGCTTGAAGAGGGTCTTTCTTTGCTGGAACAACAAGAAGAAAAGGTGTCTGCCATAAACAAGAGTGGAAGCAAGGTTTTGGTTTCACTTATACCACTAGCTGCCACTGTACGCGAGCTCTTGCATCATAAGACTGCAGGGAATGAAGCATATCAGGCTGGAAGACACGCAGAAGCTGTTGAACACTATACATCTGTTTTATCTTGTAATTTGGAGTCTCGTCCATTTGCAGCTGTCTGTTATTGCAATCGTGCCGCTGCATATAAAGTGTTAGGTCAAATAACTGATGCAATCGCAGATTGCAGTCTGGCTATAGCTCTTGATGGGAATTATTTAAAGGCACTTTCTAGACGTGCAAGTCTGTACGAGATGATCAGAGATTATTCCCAAGCAGCCAGTGATCTCAGGAGACTTCTCTCTCTTCTCAGTAAGGGGGTAGAGGATAATGCCAATTATAAAGGACCATCTGATAGATCAATTAATTATACCAATGATTTGAAACAATATCGCATTCGGCTCTCCGAGCTAGAGGAAGAAGACAGAAAGGAGATCCCTCTTGATATGTATATTATTTTGGGAGTTGAACCATCTGTTTCAATATCTGAAATCAAGAAGGCATATCGCAAAGCTGCACTTAGACATCATCCTGACAAGGCTTGCCAATCTTTAACAAAAAATGACCATGGAGATGATGGGATATGGAAGGTTATTGCTGAGGAAGTACATAGAGATGCTGATAGGCTATTCAAAATAATTGGGGAGGCATATGCTGTCCTGTCAGACCCTGCAAAGCGGGCACGGTATGATGCAGAAGAAGAAATGAGAAATTCCCAAAAGCGACGCCCTGGAAGTATGGGTAGAAATAATGCGGAGAATCAGTATCAGTATTGCTCATCTGAACAATCCAATAGGAGACATTGGAGAGAGGTTTGGAGATCATACGGTAATTCTGAAACTGGTCGACCAAGTAGGAAGTAA
Protein sequence

>Msa0553240

MEPLNSGDDRFSDASTSPFTFTTASSASVSGLSKPRFVKLRKHNNASVFNRDGTVANAAVTVVGSDKVDSALNFDKRISDRLKNLKIGTEGFGNAAIPEAMMSKLNISTEGFDKVRVESELGNELKKKLSIGENEGGNNVEDSANSVIRQLNNLNVNDVMNKKFNLVDQNFEPNLCNSSAMPSSSGLGSGSVLFQPFEVKKDQFVFQSKPEASGSNFVEFKSHGPKIGGKEGKLKEKSGNVKMNRSRVNLKHSTPAPVQGWNGHGFVFKGSVLQEDRPQGSCESCSPMEVSPYQEKLAESRTSRESSVNSNESLRVDAEDSVPMNFVDHIDEDLIGATEKMNINESSEVAREDRKEAKSECGIGENICVEEETKDESVSGVETESFKSASDSVDVTDDAESEARDGDRMLNFGTRNESVRGSGFTFAAASSAEAQLSSPKRPNKKKTWVNVGHDSYNYAPNIKVPYSSPSVPFATLTGKPNIVSGQDIKARVSFPQPKTRVSGVNEDHKLREDSASVSAEACEKWRLRGNQAYKNGDLSMAESYYKQGLGCVPKEQASRSCLRALLLCYSNLAATHMSLGRMRDAIEDCRLAAEIDQNFLKVQLRAANCYLALGEVEAASQYFKMCLQSGADVSVDRKISVEASDGLQKAQKVSDSIYHSAELLQRRTSSDAERALEHINEALMISMHSEKLLEMKAEALLMLSRYEEVIHQCDKTLSSAEKNACPIAAGCQVTYMDISELSKVVYFRLWRCSMMLKAYFHLGKLEEGLSLLEQQEEKVSAINKSGSKVLVSLIPLAATVRELLHHKTAGNEAYQAGRHAEAVEHYTSVLSCNLESRPFAAVCYCNRAAAYKVLGQITDAIADCSLAIALDGNYLKALSRRASLYEMIRDYSQAASDLRRLLSLLSKGVEDNANYKGPSDRSINYTNDLKQYRIRLSELEEEDRKEIPLDMYIILGVEPSVSISEIKKAYRKAALRHHPDKACQSLTKNDHGDDGIWKVIAEEVHRDADRLFKIIGEAYAVLSDPAKRARYDAEEEMRNSQKRRPGSMGRNNAENQYQYCSSEQSNRRHWREVWRSYGNSETGRPSRK*