AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0672120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0672120 MtrunA17_Chr4g0012061 98.664 599 8 0 29 627 115 713 0.0 1208
Msa0672120 MtrunA17_Chr7g0230671 84.422 597 93 0 31 627 105 701 0.0 1011
Msa0672120 MtrunA17_Chr6g0465161 41.386 534 284 8 31 552 94 610 1.10e-136 416
Msa0672120 MtrunA17_Chr1g0169361 42.953 447 246 5 31 474 149 589 3.74e-125 388
Msa0672120 MtrunA17_Chr1g0148121 40.085 469 277 2 28 495 93 558 1.15e-124 383
Msa0672120 MtrunA17_Chr3g0136721 37.143 525 283 7 65 555 134 645 1.48e-119 371
Msa0672120 MtrunA17_Chr1g0199921 35.714 476 268 9 69 509 203 675 9.04e-85 282
Msa0672120 MtrunA17_Chr3g0129101 33.853 449 253 9 57 469 191 631 5.47e-73 249
Msa0672120 MtrunA17_Chr8g0382921 32.272 471 275 9 35 469 160 622 4.91e-72 246
Msa0672120 MtrunA17_Chr3g0120791 34.872 390 241 5 62 444 197 580 1.07e-68 236
Msa0672120 MtrunA17_Chr5g0428451 25.381 394 261 5 69 432 128 518 5.11e-37 145
Msa0672120 MtrunA17_Chr5g0433911 33.333 282 166 8 61 328 52 325 1.17e-35 141
Msa0672120 MtrunA17_Chr1g0147481 31.930 285 166 6 80 346 138 412 7.07e-35 141
Msa0672120 MtrunA17_Chr4g0057941 26.253 419 273 13 29 429 36 436 4.65e-33 132
Msa0672120 MtrunA17_Chr8g0360981 25.917 409 263 7 56 434 199 597 1.13e-28 121
Msa0672120 MtrunA17_Chr3g0113361 28.125 288 186 6 53 322 74 358 1.06e-27 117
Msa0672120 MtrunA17_Chr2g0281061 27.090 299 185 6 75 348 224 514 1.43e-22 102
Msa0672120 MtrunA17_Chr4g0048521 24.031 387 256 8 75 432 227 604 2.38e-22 101
Msa0672120 MtrunA17_Chr1g0193751 29.110 292 174 9 81 357 242 515 1.49e-20 95.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0672120 AT1G79600.1 79.966 594 119 0 34 627 115 708 0.0 978
Msa0672120 AT1G71810.1 43.763 489 256 4 45 524 100 578 5.23e-139 421
Msa0672120 AT3G24190.1 43.848 447 242 6 31 474 157 597 1.13e-125 390
Msa0672120 AT4G31390.1 40.987 466 271 2 31 495 132 594 2.49e-125 385
Msa0672120 AT5G24970.3 39.802 505 254 7 60 519 131 630 7.95e-121 375
Msa0672120 AT5G24970.2 39.802 505 254 7 60 519 170 669 4.29e-120 374
Msa0672120 AT5G24970.1 39.208 505 254 8 60 519 131 627 3.02e-116 363
Msa0672120 AT4G31390.2 39.700 466 252 3 31 495 132 569 3.66e-116 361
Msa0672120 AT4G31390.3 41.709 398 228 2 99 495 1 395 3.65e-110 340
Msa0672120 AT2G39190.2 33.523 528 291 13 31 509 162 678 3.95e-81 273
Msa0672120 AT3G07700.1 34.586 399 254 4 51 444 171 567 8.26e-71 242
Msa0672120 AT3G07700.2 34.586 399 254 4 51 444 171 567 8.26e-71 242
Msa0672120 AT3G07700.4 34.586 399 254 4 51 444 171 567 8.26e-71 242
Msa0672120 AT5G64940.1 33.480 454 256 9 54 469 203 648 1.21e-69 241
Msa0672120 AT5G64940.2 33.480 454 256 9 54 469 203 648 1.21e-69 241
Msa0672120 AT3G07700.3 33.100 429 249 6 51 444 171 596 7.16e-68 235
Msa0672120 AT5G05200.1 25.823 395 258 4 69 432 129 519 3.66e-39 152
Msa0672120 AT4G24810.4 27.848 316 201 7 50 350 13 316 3.73e-37 141
Msa0672120 AT4G24810.5 29.054 296 183 7 50 330 13 296 1.28e-36 139
Msa0672120 AT4G24810.6 24.709 429 266 10 50 445 13 417 1.91e-36 142
Msa0672120 AT4G24810.1 24.709 429 266 10 50 445 13 417 1.91e-36 142
Msa0672120 AT4G24810.2 24.709 429 266 10 50 445 56 460 3.34e-36 142
Msa0672120 AT4G24810.3 24.541 436 265 11 50 445 13 424 1.34e-34 137
Msa0672120 AT5G24810.1 32.667 300 167 9 50 331 89 371 5.77e-34 139
Msa0672120 AT5G50330.1 28.000 375 226 12 9 353 2 362 2.93e-33 134
Msa0672120 AT1G65950.2 32.922 243 155 4 80 318 113 351 2.93e-33 133
Msa0672120 AT1G65950.1 32.922 243 155 4 80 318 113 351 1.10e-32 133
Msa0672120 AT2G39190.1 38.421 190 113 3 39 227 172 358 5.03e-30 122
Msa0672120 AT5G24810.2 29.909 331 166 10 50 331 89 402 4.64e-29 124
Msa0672120 AT2G40090.1 28.783 337 213 10 32 348 57 386 5.35e-28 119
Msa0672120 AT5G50330.2 26.400 375 216 13 9 353 2 346 4.26e-27 115
Msa0672120 AT1G11390.1 25.000 404 257 10 63 432 207 598 1.60e-24 108
Msa0672120 AT1G61640.1 24.121 398 253 9 69 432 213 595 7.37e-24 106
Msa0672120 AT1G61640.3 26.774 310 186 7 69 348 213 511 1.30e-23 105
Msa0672120 AT4G01660.1 27.491 291 184 9 81 359 240 515 1.11e-18 90.5
Msa0672120 AT1G61640.2 27.317 205 126 4 69 258 213 409 5.62e-15 78.2

Find 147 sgRNAs with CRISPR-Local

Find 447 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCAGATTGTGTTTAATT+TGG 0.146085 4_4:+16309226 Msa0672120:CDS
TGCAATTTCAAGGATCATTT+TGG 0.173798 4_4:+16314915 Msa0672120:three_prime_UTR
TTGTATCAATATCCATTTAA+TGG 0.197786 4_4:+16312017 Msa0672120:CDS
GAAGCGAGATTTGCAATAAT+TGG 0.217043 4_4:+16311804 Msa0672120:CDS
TGCAGCAAGCACCTTAAAAT+TGG 0.225494 4_4:-16312418 None:intergenic
CAACTTGCATTTGGCCATTT+GGG 0.234966 4_4:+16315447 Msa0672120:three_prime_UTR
TAGTTTATACTTGAAATTCT+AGG 0.239920 4_4:+16314328 Msa0672120:three_prime_UTR
TCAACTTGCATTTGGCCATT+TGG 0.247259 4_4:+16315446 Msa0672120:three_prime_UTR
TTCTACCTCATTAGAGGTTT+AGG 0.250334 4_4:+16310734 Msa0672120:CDS
GAATGCATTGAGAGGGAATT+AGG 0.251683 4_4:+16310557 Msa0672120:CDS
ATAAGAATTTGCTTAATTTA+CGG 0.262626 4_4:-16315539 None:intergenic
ATTGCAAATCTCGCTTCTTC+TGG 0.262758 4_4:-16311798 None:intergenic
GTGTTTAATTTGGGTTCATT+TGG 0.267830 4_4:+16309236 Msa0672120:CDS
TTTCAGATTGTGTTTAATTT+GGG 0.276250 4_4:+16309227 Msa0672120:CDS
CAAAAGTAATTCAAACTTCT+AGG 0.280790 4_4:-16314209 None:intergenic
TCTACCTCATTAGAGGTTTA+GGG 0.280854 4_4:+16310735 Msa0672120:CDS
CATACTATGCGTTGATATTA+AGG 0.284829 4_4:+16312355 Msa0672120:CDS
TCTAATTCTAGTTATTATAA+TGG 0.285765 4_4:-16315385 None:intergenic
TTAATTGACAAAATAGAGTT+TGG 0.287906 4_4:-16315505 None:intergenic
ATGCTCTTGATTTCTTATCT+AGG 0.293725 4_4:+16311880 Msa0672120:CDS
AACATTATCTCACCATTAAA+TGG 0.304241 4_4:-16312029 None:intergenic
CGCTTTCTTATGCAATTACT+TGG 0.319801 4_4:+16314113 Msa0672120:CDS
TCCTCATCCTGGTAATCTTT+TGG 0.321004 4_4:+16311722 Msa0672120:CDS
CAACCTGAGGCCCGTAAACT+TGG 0.330945 4_4:+16314050 Msa0672120:CDS
ATTAAGGTCTCTCACTGTTC+TGG 0.337948 4_4:+16312371 Msa0672120:CDS
TTGGACTTCTACCTCATTAG+AGG 0.338286 4_4:+16310728 Msa0672120:CDS
GCTTGAAAACCTTCTAGTTC+AGG 0.339166 4_4:+16312893 Msa0672120:CDS
CCGATAGCTGCTGCTAGTTT+AGG 0.342246 4_4:+16310620 Msa0672120:CDS
TGTTTAATTTGGGTTCATTT+GGG 0.356535 4_4:+16309237 Msa0672120:CDS
GAGTTGCTGATCAGAATAAA+AGG 0.357382 4_4:+16309288 Msa0672120:CDS
TTTCGAAGTGCAGGAACAAT+TGG 0.368170 4_4:-16311918 None:intergenic
GCATCTCTTAGATATGGATT+TGG 0.372745 4_4:-16312477 None:intergenic
GTCCCTCTGTAGGTATTTGT+AGG 0.375420 4_4:-16314875 None:intergenic
TTGAGGAACCTTGTCTTCAA+TGG 0.379397 4_4:+16313089 Msa0672120:CDS
GATACATTCCTTCAATTTCA+AGG 0.380243 4_4:+16314965 Msa0672120:three_prime_UTR
AACAGAAACATGTGTATGTA+AGG 0.384929 4_4:-16315312 None:intergenic
ATCAGAGCATCTCTTAGATA+TGG 0.388348 4_4:-16312483 None:intergenic
GAGATCAAGTGATTAGGATA+TGG 0.389231 4_4:+16313171 Msa0672120:CDS
AAGACGATTGTGGACGGTCT+CGG 0.394059 4_4:+16311987 Msa0672120:CDS
CATTCAAAGGCGTCCTCGTC+AGG 0.401484 4_4:-16310539 None:intergenic
TGCTCTTGATTTCTTATCTA+GGG 0.422756 4_4:+16311881 Msa0672120:CDS
TGACCCAATTTGACAAAAGT+TGG 0.428903 4_4:-16309353 None:intergenic
AGCTGCTGCTAGTTTAGGTC+AGG 0.429613 4_4:+16310625 Msa0672120:CDS
TCAGTTTCTGACATCATAAG+TGG 0.430403 4_4:-16313125 None:intergenic
AGAAATATATTCACTAAGCT+TGG 0.434347 4_4:+16309329 Msa0672120:CDS
AAATTAGTCCTTGAAATTGA+AGG 0.439860 4_4:-16314973 None:intergenic
CTTGAAAACCTTCTAGTTCA+GGG 0.442279 4_4:+16312894 Msa0672120:CDS
AGGAACATACCGGTATGTTT+CGG 0.445651 4_4:-16313060 None:intergenic
TACCTTCAGGACAGGTTGTA+AGG 0.451984 4_4:-16312949 None:intergenic
GAGGCAAGGGCTTAACGTCT+TGG 0.458687 4_4:+16311632 Msa0672120:CDS
TGCAATGTATCAATAACAAT+TGG 0.458874 4_4:+16315274 Msa0672120:three_prime_UTR
AACCTGAGGCCCGTAAACTT+GGG 0.465701 4_4:+16314051 Msa0672120:CDS
GCGGTCAAGGTCCAACGCCC+TGG 0.472478 4_4:+16310686 Msa0672120:CDS
TTATAATAACTAGAATTAGA+AGG 0.472851 4_4:+16315388 Msa0672120:three_prime_UTR
GGACTAAAATGTCATTAAGT+TGG 0.474383 4_4:-16314497 None:intergenic
AGCTCAGAGATCAAGTGATT+AGG 0.475418 4_4:+16313165 Msa0672120:CDS
AGTTTATACTTGAAATTCTA+GGG 0.478261 4_4:+16314329 Msa0672120:three_prime_UTR
TATTGATAATGTGGAGGACT+AGG 0.480624 4_4:-16314361 None:intergenic
GCAGCAAGCACCTTAAAATT+GGG 0.485400 4_4:-16312417 None:intergenic
CCTATAGCTTCTTCAATGCC+AGG 0.489261 4_4:-16310704 None:intergenic
TCAAGAGCTTAATTATGTGC+AGG 0.492075 4_4:+16310835 Msa0672120:CDS
ATCAATCCAGTCCCTCGTAT+TGG 0.493816 4_4:-16314945 None:intergenic
GGGCAAAGTTGTTGCGGTCA+AGG 0.500027 4_4:+16310673 Msa0672120:CDS
TTCCTCAGAACTTCACCATC+AGG 0.502663 4_4:-16312981 None:intergenic
AAAGCTCGGTTGAAGCGGTC+GGG 0.505739 4_4:+16310653 Msa0672120:CDS
GAAATGCTCATAAGCCCAAA+TGG 0.506751 4_4:-16315461 None:intergenic
CCTGGCATTGAAGAAGCTAT+AGG 0.507063 4_4:+16310704 Msa0672120:CDS
CGAAGGTACTAACGATCGAT+TGG 0.507393 4_4:+16311571 Msa0672120:CDS
CTTCTTCAATGCCAGGGCGT+TGG 0.511436 4_4:-16310697 None:intergenic
TACTCAGATGGACAAATATC+CGG 0.511908 4_4:-16309392 None:intergenic
TGTTGTGTAGGTTGCGGGAA+GGG 0.512424 4_4:+16309202 Msa0672120:intron
AATATCAACGCATAGTATGC+TGG 0.512574 4_4:-16312351 None:intergenic
CTAACGATCGATTGGGTCGA+AGG 0.517986 4_4:+16311579 Msa0672120:CDS
GCTTAACTTCAAGACGATTG+TGG 0.518649 4_4:+16311977 Msa0672120:CDS
TAGGTCAGGTTTATAAAGCT+CGG 0.519929 4_4:+16310639 Msa0672120:CDS
TTATTGTGGACAGAGAAGAT+AGG 0.520089 4_4:+16315077 Msa0672120:intron
CTCAGACAACTGCTCGAGTA+CGG 0.524488 4_4:+16311684 Msa0672120:CDS
ATTAGAAGGAGAAAATATGC+AGG 0.524950 4_4:+16315402 Msa0672120:three_prime_UTR
TAAAGCTCGGTTGAAGCGGT+CGG 0.526705 4_4:+16310652 Msa0672120:CDS
TAGAGATTTCTCTGCTAAAG+AGG 0.529315 4_4:+16312926 Msa0672120:CDS
TGGGTCAAGGGCTGTCTACT+AGG 0.536023 4_4:+16309369 Msa0672120:CDS
TTGTTGTGTAGGTTGCGGGA+AGG 0.536381 4_4:+16309201 Msa0672120:intron
CAGGACTCAACAATACCTTC+AGG 0.537914 4_4:-16312962 None:intergenic
TGTGTCACAGCAAAGGCTAA+AGG 0.539286 4_4:+16314163 Msa0672120:three_prime_UTR
TTCCATGCAGATCCTCATCC+TGG 0.539915 4_4:+16311711 Msa0672120:CDS
CTAGCAGCAGCTATCGGCGA+TGG 0.540209 4_4:-16310614 None:intergenic
CGCCTTTGAATGCATTGAGA+GGG 0.540213 4_4:+16310550 Msa0672120:CDS
GCACAATTTCCGAAACATAC+CGG 0.540600 4_4:+16313051 Msa0672120:CDS
CCTAAACTAGCAGCAGCTAT+CGG 0.540644 4_4:-16310620 None:intergenic
TTTATAAAGCTCGGTTGAAG+CGG 0.541624 4_4:+16310648 Msa0672120:CDS
CATTGAAGAAGCTATAGGAT+TGG 0.543334 4_4:+16310709 Msa0672120:CDS
GGCCTTACAACCTGTCCTGA+AGG 0.543439 4_4:+16312947 Msa0672120:CDS
GAGCCATAGCTTCGTAGTCT+CGG 0.545454 4_4:-16311848 None:intergenic
AATCAAATTTGTCCCTCTGT+AGG 0.547234 4_4:-16314885 None:intergenic
ACCTGAGGCCCGTAAACTTG+GGG 0.549273 4_4:+16314052 Msa0672120:CDS
GTTTCTAATAAATAAATATG+TGG 0.549328 4_4:+16310757 Msa0672120:CDS
CTCAACAATACCTTCAGGAC+AGG 0.549422 4_4:-16312957 None:intergenic
TTGCATTGCCATTGAAGACA+AGG 0.554912 4_4:-16313097 None:intergenic
ATTATAATGGAAACAAAAGA+AGG 0.555471 4_4:-16315372 None:intergenic
TCAAGGGCTGTCTACTAGGC+CGG 0.556635 4_4:+16309373 Msa0672120:CDS
AGGTCTCTCACTGTTCTGGA+AGG 0.557957 4_4:+16312375 Msa0672120:CDS
GCCAAAAGATTACCAGGATG+AGG 0.558707 4_4:-16311723 None:intergenic
GAAGGTACTAACGATCGATT+GGG 0.560592 4_4:+16311572 Msa0672120:CDS
TTCCCTCTCAATGCATTCAA+AGG 0.562534 4_4:-16310552 None:intergenic
TTCGAATATTGATAATGTGG+AGG 0.566160 4_4:-16314367 None:intergenic
ATATCACCAATACGAGGGAC+TGG 0.569433 4_4:+16314939 Msa0672120:three_prime_UTR
CAAGAAGCAATTGAGAGGCA+AGG 0.576159 4_4:+16311618 Msa0672120:CDS
TAACCGAGACTACGAAGCTA+TGG 0.578460 4_4:+16311845 Msa0672120:CDS
AAGAAGCAATTGAGAGGCAA+GGG 0.580778 4_4:+16311619 Msa0672120:CDS
TTGAAACTAAATGAATAATG+TGG 0.582812 4_4:-16314457 None:intergenic
GCGTCCTCGTCAGGAAATGT+TGG 0.582997 4_4:-16310530 None:intergenic
GAAACCCTAAACCTCTAATG+AGG 0.585397 4_4:-16310739 None:intergenic
AGGAGAAAATATGCAGGTGG+TGG 0.586058 4_4:+16315408 Msa0672120:three_prime_UTR
GGTGTTGCCAAAAGATTACC+AGG 0.588144 4_4:-16311729 None:intergenic
TTGTCCATCTGAGTATCTTG+AGG 0.589362 4_4:+16309400 Msa0672120:CDS
TTGATAACAGATTCAGCAGA+GGG 0.598912 4_4:-16314428 None:intergenic
ACGCCTTTGAATGCATTGAG+AGG 0.599528 4_4:+16310549 Msa0672120:CDS
AACTTCAAGACGATTGTGGA+CGG 0.600151 4_4:+16311981 Msa0672120:CDS
ACAGAAACATGTGTATGTAA+GGG 0.601716 4_4:-16315311 None:intergenic
CTATAGCTTCTTCAATGCCA+GGG 0.605574 4_4:-16310703 None:intergenic
CATAAGTGTCTGTGCTACAA+AGG 0.605722 4_4:+16309047 Msa0672120:CDS
CCTGAGGCCCGTAAACTTGG+GGG 0.608957 4_4:+16314053 Msa0672120:CDS
CATAGATTGTGTCACAGCAA+AGG 0.609015 4_4:+16314156 Msa0672120:exon
AGCTCCTCAAGATACTCAGA+TGG 0.610256 4_4:-16309404 None:intergenic
TGCAGGAGGGACAAAATGCA+AGG 0.613387 4_4:+16311478 Msa0672120:intron
TATCGGCGATGGAGATATTG+TGG 0.615296 4_4:-16310603 None:intergenic
TACCTACAAATACCTACAGA+GGG 0.618827 4_4:+16314873 Msa0672120:intron
AAGGTATTGTTGAGTCCTGA+TGG 0.620888 4_4:+16312966 Msa0672120:CDS
TGTCTTCAATGGCAATGCAA+AGG 0.625326 4_4:+16313100 Msa0672120:CDS
AGTATCGGTAGCAAAAGAGA+TGG 0.625690 4_4:-16313224 None:intergenic
TTGAAAACCTTCTAGTTCAG+GGG 0.625717 4_4:+16312895 Msa0672120:CDS
TACCAGGATGAGGATCTGCA+TGG 0.634417 4_4:-16311713 None:intergenic
ATGATCAAGAAGCAATTGAG+AGG 0.643370 4_4:+16311613 Msa0672120:CDS
TTTGCCAACATTTCCTGACG+AGG 0.644621 4_4:+16310526 Msa0672120:CDS
ATACCTACAAATACCTACAG+AGG 0.648183 4_4:+16314872 Msa0672120:intron
CTGAGGCCCGTAAACTTGGG+GGG 0.652407 4_4:+16314054 Msa0672120:CDS
TTGGGACTATACAAGTGCGA+AGG 0.655685 4_4:+16311554 Msa0672120:CDS
TTGGAATATCACCAATACGA+GGG 0.660471 4_4:+16314934 Msa0672120:three_prime_UTR
AGAAGGAGAAAATATGCAGG+TGG 0.669617 4_4:+16315405 Msa0672120:three_prime_UTR
TCATTAAGTTGGTAATATCG+AGG 0.670997 4_4:-16314486 None:intergenic
GTCCTGATGGTGAAGTTCTG+AGG 0.671724 4_4:+16312979 Msa0672120:CDS
TATCGTCGTCATTATTGATG+CGG 0.674861 4_4:+16315220 Msa0672120:three_prime_UTR
ACAGGTGCTTCAGCAACCTG+AGG 0.676737 4_4:+16314037 Msa0672120:intron
TTTGATAACAGATTCAGCAG+AGG 0.688534 4_4:-16314429 None:intergenic
GCGGTCGGGCAAAGTTGTTG+CGG 0.688582 4_4:+16310667 Msa0672120:CDS
GTCTTGGATCTAGTAAACAG+CGG 0.723373 4_4:+16311648 Msa0672120:CDS
TTTGGAATATCACCAATACG+AGG 0.727351 4_4:+16314933 Msa0672120:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATATTAGATTTTTCTTT+TGG + chr4_4:16311427-16311446 Msa0672120:intron 10.0%
!!! TTATATTAGATTTTTCTTTT+GGG + chr4_4:16311428-16311447 Msa0672120:intron 10.0%
!! AATGAAATAATAAATTGTTA+AGG + chr4_4:16312745-16312764 Msa0672120:intron 10.0%
!!! GAAATATATATTTTTTTGAA+TGG + chr4_4:16313958-16313977 Msa0672120:intron 10.0%
!!! TTGTATTTTAATTTTTGTTT+TGG + chr4_4:16315160-16315179 Msa0672120:three_prime_UTR 10.0%
!! GTTTCTAATAAATAAATATG+TGG + chr4_4:16310757-16310776 Msa0672120:CDS 15.0%
!!! TATATTAGATTTTTCTTTTG+GGG + chr4_4:16311429-16311448 Msa0672120:intron 15.0%
!! TTTAAAAATGACAAATAAGT+AGG - chr4_4:16312651-16312670 None:intergenic 15.0%
!! TAAATTGTTAAGGATATTAT+AGG + chr4_4:16312755-16312774 Msa0672120:intron 15.0%
!!! TCAAAAATTATTTTACATGT+TGG + chr4_4:16313378-16313397 Msa0672120:intron 15.0%
!!! AGTAATAAATTGCTATATTT+TGG - chr4_4:16313499-16313518 None:intergenic 15.0%
!!! ATTAAAATTTTGCAATTTCA+AGG + chr4_4:16314905-16314924 Msa0672120:three_prime_UTR 15.0%
!!! TCTAATTCTAGTTATTATAA+TGG - chr4_4:16315388-16315407 None:intergenic 15.0%
!! TTATAATAACTAGAATTAGA+AGG + chr4_4:16315388-16315407 Msa0672120:three_prime_UTR 15.0%
!!! ATAAGAATTTGCTTAATTTA+CGG - chr4_4:16315542-16315561 None:intergenic 15.0%
!!! TTTTTGTGAATATCTTTTGT+GGG + chr4_4:16309079-16309098 Msa0672120:CDS 20.0%
!! CAAAAGATAATCACAAAAAA+GGG - chr4_4:16309136-16309155 None:intergenic 20.0%
!! ACAAAAGATAATCACAAAAA+AGG - chr4_4:16309137-16309156 None:intergenic 20.0%
!!! TTTTTTGTGATTATCTTTTG+TGG + chr4_4:16309136-16309155 Msa0672120:intron 20.0%
!!! TTTTTGTGATTATCTTTTGT+GGG + chr4_4:16309137-16309156 Msa0672120:intron 20.0%
!! ATTTCAGATTGTGTTTAATT+TGG + chr4_4:16309226-16309245 Msa0672120:CDS 20.0%
!!! TTTCAGATTGTGTTTAATTT+GGG + chr4_4:16309227-16309246 Msa0672120:CDS 20.0%
!! AATGTAAAGTGATTTATGTT+TGG - chr4_4:16309719-16309738 None:intergenic 20.0%
!!! ACTATTTGACTATTTCATTT+TGG + chr4_4:16309879-16309898 Msa0672120:intron 20.0%
!!! CTATTTGACTATTTCATTTT+GGG + chr4_4:16309880-16309899 Msa0672120:intron 20.0%
!!! AAATTTATATCGATTTAGTG+CGG + chr4_4:16309957-16309976 Msa0672120:intron 20.0%
!! GATGAAAACAAACATAATAA+AGG - chr4_4:16310402-16310421 None:intergenic 20.0%
!! ATCATTGACAAAAATTTCAA+TGG - chr4_4:16310445-16310464 None:intergenic 20.0%
!! TCATTATCAAATACAGATTT+CGG - chr4_4:16310880-16310899 None:intergenic 20.0%
!! AATACTGATCACTATTTATA+GGG + chr4_4:16310928-16310947 Msa0672120:intron 20.0%
!!! GTTTTATTCATTAACATACA+AGG - chr4_4:16311394-16311413 None:intergenic 20.0%
!! TTGTATCAATATCCATTTAA+TGG + chr4_4:16312017-16312036 Msa0672120:CDS 20.0%
!!! AAACAATGATGGATTTAAAA+AGG - chr4_4:16312554-16312573 None:intergenic 20.0%
!!! TTTTGAGTTAAACATTTAAG+TGG - chr4_4:16313364-16313383 None:intergenic 20.0%
!!! TTAATTCTATGTTCTTTTGA+TGG + chr4_4:16313452-16313471 Msa0672120:intron 20.0%
!! AAGGTTTAAATGTTAATTGA+GGG - chr4_4:16313526-16313545 None:intergenic 20.0%
!!! TGTGTAATTTTTTGATGTAT+TGG + chr4_4:16313712-16313731 Msa0672120:intron 20.0%
!!! ATATACATTTTACTGTTTCA+AGG - chr4_4:16313834-16313853 None:intergenic 20.0%
!! TAGTTTATACTTGAAATTCT+AGG + chr4_4:16314328-16314347 Msa0672120:three_prime_UTR 20.0%
!! AGTTTATACTTGAAATTCTA+GGG + chr4_4:16314329-16314348 Msa0672120:three_prime_UTR 20.0%
!!! ATTTTCGAATATTGATAATG+TGG - chr4_4:16314373-16314392 None:intergenic 20.0%
!! TTGAAACTAAATGAATAATG+TGG - chr4_4:16314460-16314479 None:intergenic 20.0%
!!! ATCAGATATTTACAGTTTTT+TGG - chr4_4:16315201-16315220 None:intergenic 20.0%
!!! ATTATAATGGAAACAAAAGA+AGG - chr4_4:16315375-16315394 None:intergenic 20.0%
!! TTAATTGACAAAATAGAGTT+TGG - chr4_4:16315508-16315527 None:intergenic 20.0%
!! GTTTTTGTGAATATCTTTTG+TGG + chr4_4:16309078-16309097 Msa0672120:CDS 25.0%
!!! TGTTTAATTTGGGTTCATTT+GGG + chr4_4:16309237-16309256 Msa0672120:CDS 25.0%
! AGAAATATATTCACTAAGCT+TGG + chr4_4:16309329-16309348 Msa0672120:CDS 25.0%
!!! AGTATTGAATTCTTACCTTT+TGG + chr4_4:16309439-16309458 Msa0672120:intron 25.0%
! CAAATGAAAAGAAAACCAAA+AGG - chr4_4:16309457-16309476 None:intergenic 25.0%
! TCTAGAGATTGATTAATGTT+TGG + chr4_4:16309522-16309541 Msa0672120:intron 25.0%
! TCTAACTTGAACTTAGAATT+TGG + chr4_4:16309645-16309664 Msa0672120:intron 25.0%
!!! TCAATTCTGATCACTTTTAT+AGG + chr4_4:16309980-16309999 Msa0672120:intron 25.0%
!! TTTTTGCAAAAGTTACACTT+TGG - chr4_4:16310105-16310124 None:intergenic 25.0%
!! TGTAACTTTTGCAAAAATCA+TGG + chr4_4:16310108-16310127 Msa0672120:intron 25.0%
! CACAGAGTAATTTAAAAACA+TGG + chr4_4:16310333-16310352 Msa0672120:intron 25.0%
! TGATAGTAGTTTGATACAAA+AGG + chr4_4:16310902-16310921 Msa0672120:intron 25.0%
! CAATACTGATCACTATTTAT+AGG + chr4_4:16310927-16310946 Msa0672120:intron 25.0%
! AGACTCAATCCTTAATAAAT+AGG + chr4_4:16310957-16310976 Msa0672120:intron 25.0%
! GACTCAATCCTTAATAAATA+GGG + chr4_4:16310958-16310977 Msa0672120:intron 25.0%
! TAAGATTGAAAACTGATCTT+AGG + chr4_4:16311047-16311066 Msa0672120:intron 25.0%
! GATATTATGCTAGAATATCT+TGG - chr4_4:16311080-16311099 None:intergenic 25.0%
! AAATACACTCATTATATGCT+TGG - chr4_4:16311330-16311349 None:intergenic 25.0%
!!! GATTGAATGTTAATTTTGAC+AGG + chr4_4:16311451-16311470 Msa0672120:intron 25.0%
!!! AAACTTGCTTTTCTTGATTT+CGG + chr4_4:16311759-16311778 Msa0672120:CDS 25.0%
! AACATTATCTCACCATTAAA+TGG - chr4_4:16312032-16312051 None:intergenic 25.0%
! CTCTAATACAGAAAGAAAAT+TGG - chr4_4:16312080-16312099 None:intergenic 25.0%
! TACAAAAACAACGGATAAAA+TGG - chr4_4:16312615-16312634 None:intergenic 25.0%
!! CAGATTTTCTACAAAAACAA+CGG - chr4_4:16312624-16312643 None:intergenic 25.0%
!!! CCTTTTTATTTGTGGTTTTA+AGG - chr4_4:16312810-16312829 None:intergenic 25.0%
! CCTTAAAACCACAAATAAAA+AGG + chr4_4:16312807-16312826 Msa0672120:intron 25.0%
! AAACCACAAATAAAAAGGAA+TGG + chr4_4:16312812-16312831 Msa0672120:intron 25.0%
! GAAGGTTTAAATGTTAATTG+AGG - chr4_4:16313527-16313546 None:intergenic 25.0%
! CAAAAAATTACACATTGTCT+GGG - chr4_4:16313706-16313725 None:intergenic 25.0%
! TCAAAAAATTACACATTGTC+TGG - chr4_4:16313707-16313726 None:intergenic 25.0%
!! TTTAGAACATATAGTTGACT+TGG + chr4_4:16313906-16313925 Msa0672120:intron 25.0%
!!! ATCTATGTAGATGTTGTTTT+TGG - chr4_4:16314143-16314162 None:intergenic 25.0%
! CAAAAGTAATTCAAACTTCT+AGG - chr4_4:16314212-16314231 None:intergenic 25.0%
!! TTCTTTGTCATATTTTGCAA+TGG + chr4_4:16314269-16314288 Msa0672120:three_prime_UTR 25.0%
!! CTGACAATTTGTTTATAAGT+GGG + chr4_4:16314788-16314807 Msa0672120:intron 25.0%
!! TGACAATTTGTTTATAAGTG+GGG + chr4_4:16314789-16314808 Msa0672120:intron 25.0%
! GTATTTGTAGGTATTAGAAA+TGG - chr4_4:16314866-16314885 None:intergenic 25.0%
! AAATTAGTCCTTGAAATTGA+AGG - chr4_4:16314976-16314995 None:intergenic 25.0%
!!! TATGTTTTGTTTTTTCTGTC+AGG + chr4_4:16315054-16315073 Msa0672120:intron 25.0%
!!! TACAGTTTTTTGGACTAAAA+TGG - chr4_4:16315191-16315210 None:intergenic 25.0%
! TGCAATGTATCAATAACAAT+TGG + chr4_4:16315274-16315293 Msa0672120:three_prime_UTR 25.0%
!! AATTTTTGTCAACTTGCATT+TGG + chr4_4:16315438-16315457 Msa0672120:three_prime_UTR 25.0%
CTACACAACAAAACCAAAAA+CGG - chr4_4:16309192-16309211 None:intergenic 30.0%
!! GTGTTTAATTTGGGTTCATT+TGG + chr4_4:16309236-16309255 Msa0672120:CDS 30.0%
!! TTAATGTTTGGTTCCACTTT+TGG + chr4_4:16309534-16309553 Msa0672120:intron 30.0%
ATAATTGATCCTGACATGTT+TGG + chr4_4:16309584-16309603 Msa0672120:intron 30.0%
! TTCAAGTTAGAACCAATTCA+GGG - chr4_4:16309636-16309655 None:intergenic 30.0%
! TAGGTTGAATAGTAAATTCG+AGG - chr4_4:16309679-16309698 None:intergenic 30.0%
GGATATGTTCAAGTAAAAGT+AGG - chr4_4:16309698-16309717 None:intergenic 30.0%
!! ACTATTTCATTTTGGGTGTT+TGG + chr4_4:16309887-16309906 Msa0672120:intron 30.0%
TTTGTGAATGTTTGGATTCA+AGG - chr4_4:16310161-16310180 None:intergenic 30.0%
GCTTCAAATTTGTGAATGTT+TGG - chr4_4:16310169-16310188 None:intergenic 30.0%
! ACATTCACAAATTTGAAGCA+TGG + chr4_4:16310170-16310189 Msa0672120:intron 30.0%
!!! TGAAGCATGGTTTTAAATTG+CGG + chr4_4:16310183-16310202 Msa0672120:intron 30.0%
!!! ATGGTTTTAAATTGCGGTTA+CGG + chr4_4:16310189-16310208 Msa0672120:intron 30.0%
TGATGTAGTGTTGTCAATTA+TGG + chr4_4:16310376-16310395 Msa0672120:intron 30.0%
CCTGATTTCCCTATTTATTA+AGG - chr4_4:16310969-16310988 None:intergenic 30.0%
CCTTAATAAATAGGGAAATC+AGG + chr4_4:16310966-16310985 Msa0672120:intron 30.0%
CATATCTTAGATGATCTCTT+CGG - chr4_4:16311026-16311045 None:intergenic 30.0%
ATAAATATTGAACCCTGTTC+TGG + chr4_4:16311144-16311163 Msa0672120:intron 30.0%
CAAAAAATTGTATGCTGACA+AGG + chr4_4:16311506-16311525 Msa0672120:CDS 30.0%
!!! TCTTAGTTCCTGATGTTTTT+TGG + chr4_4:16311535-16311554 Msa0672120:CDS 30.0%
!!! CTTAGTTCCTGATGTTTTTT+GGG + chr4_4:16311536-16311555 Msa0672120:CDS 30.0%
!! AACTTGCTTTTCTTGATTTC+GGG + chr4_4:16311760-16311779 Msa0672120:CDS 30.0%
ATGCTCTTGATTTCTTATCT+AGG + chr4_4:16311880-16311899 Msa0672120:CDS 30.0%
TGCTCTTGATTTCTTATCTA+GGG + chr4_4:16311881-16311900 Msa0672120:CDS 30.0%
TATCTGTATTAGTGCTTCAT+AGG - chr4_4:16312114-16312133 None:intergenic 30.0%
CACTAATACAGATATAGACA+CGG + chr4_4:16312120-16312139 Msa0672120:intron 30.0%
! CATACTATGCGTTGATATTA+AGG + chr4_4:16312355-16312374 Msa0672120:CDS 30.0%
! ATATGCTGATCCCAATTTTA+AGG + chr4_4:16312407-16312426 Msa0672120:CDS 30.0%
! CATATCCCTATTTTGCTAAA+AGG + chr4_4:16312442-16312461 Msa0672120:CDS 30.0%
! AGAAGCCTTTTAGCAAAATA+GGG - chr4_4:16312450-16312469 None:intergenic 30.0%
! TAGAAGCCTTTTAGCAAAAT+AGG - chr4_4:16312451-16312470 None:intergenic 30.0%
! TTTTGCTAAAAGGCTTCTAA+CGG + chr4_4:16312452-16312471 Msa0672120:CDS 30.0%
TCAACAAGTTCAAACAATGA+TGG - chr4_4:16312565-16312584 None:intergenic 30.0%
AAACAACGGATAAAATGGAA+AGG - chr4_4:16312610-16312629 None:intergenic 30.0%
!!! GGTTTTAAGGTTATTTACAC+CGG - chr4_4:16312797-16312816 None:intergenic 30.0%
CACAAATAAAAAGGAATGGA+GGG + chr4_4:16312816-16312835 Msa0672120:intron 30.0%
! CTTTTTCTTACCTGTAGTAT+CGG - chr4_4:16313242-16313261 None:intergenic 30.0%
!! TTACCTTCAATCTGAAGTTT+TGG + chr4_4:16313316-16313335 Msa0672120:intron 30.0%
ATGGAGATTTGTGAATATCA+AGG + chr4_4:16313471-16313490 Msa0672120:intron 30.0%
CAATTGTGTCCTTAGTTAAA+AGG + chr4_4:16313627-16313646 Msa0672120:intron 30.0%
!! AATTACTTTTGCGATACTCA+AGG + chr4_4:16314221-16314240 Msa0672120:three_prime_UTR 30.0%
!! TTCGAATATTGATAATGTGG+AGG - chr4_4:16314370-16314389 None:intergenic 30.0%
!! TCATTAAGTTGGTAATATCG+AGG - chr4_4:16314489-16314508 None:intergenic 30.0%
GGACTAAAATGTCATTAAGT+TGG - chr4_4:16314500-16314519 None:intergenic 30.0%
! CTGACAATTTGTTTATACGT+GGG + chr4_4:16314556-16314575 Msa0672120:intron 30.0%
! TGACAATTTGTTTATACGTG+GGG + chr4_4:16314557-16314576 Msa0672120:intron 30.0%
TGATACCATATTAGAAATGG+TGG - chr4_4:16314631-16314650 None:intergenic 30.0%
CTCTGATACCATATTAGAAA+TGG - chr4_4:16314634-16314653 None:intergenic 30.0%
CCACTTATAAACAAATTGTC+AGG - chr4_4:16314790-16314809 None:intergenic 30.0%
! CCTGACAATTTGTTTATAAG+TGG + chr4_4:16314787-16314806 Msa0672120:intron 30.0%
! GACAATTTGTTTATAAGTGG+GGG + chr4_4:16314790-16314809 Msa0672120:intron 30.0%
TTTGTAGGTATTAGAAATGG+TGG - chr4_4:16314863-16314882 None:intergenic 30.0%
! TGCAATTTCAAGGATCATTT+TGG + chr4_4:16314915-16314934 Msa0672120:three_prime_UTR 30.0%
GATACATTCCTTCAATTTCA+AGG + chr4_4:16314965-16314984 Msa0672120:three_prime_UTR 30.0%
!!! TTTTTTCTGTCAGGTTATTG+TGG + chr4_4:16315063-16315082 Msa0672120:intron 30.0%
ACAGAAACATGTGTATGTAA+GGG - chr4_4:16315314-16315333 None:intergenic 30.0%
AACAGAAACATGTGTATGTA+AGG - chr4_4:16315315-16315334 None:intergenic 30.0%
ATTAGAAGGAGAAAATATGC+AGG + chr4_4:16315402-16315421 Msa0672120:three_prime_UTR 30.0%
!! GAATTGTGTTGATCCGTTTT+TGG + chr4_4:16309176-16309195 Msa0672120:intron 35.0%
!!! CGTTTTTGGTTTTGTTGTGT+AGG + chr4_4:16309190-16309209 Msa0672120:intron 35.0%
!!! ATTTGGGTTGAAGCTTTTGT+GGG + chr4_4:16309253-16309272 Msa0672120:CDS 35.0%
GAGTTGCTGATCAGAATAAA+AGG + chr4_4:16309288-16309307 Msa0672120:CDS 35.0%
! TGGACCAACTTTTGTCAAAT+TGG + chr4_4:16309349-16309368 Msa0672120:CDS 35.0%
! GGACCAACTTTTGTCAAATT+GGG + chr4_4:16309350-16309369 Msa0672120:CDS 35.0%
TGACCCAATTTGACAAAAGT+TGG - chr4_4:16309356-16309375 None:intergenic 35.0%
! ACTTTTGTCAAATTGGGTCA+AGG + chr4_4:16309356-16309375 Msa0672120:CDS 35.0%
! CTTTTGTCAAATTGGGTCAA+GGG + chr4_4:16309357-16309376 Msa0672120:CDS 35.0%
TACTCAGATGGACAAATATC+CGG - chr4_4:16309395-16309414 None:intergenic 35.0%
! AAATTTGCTTCCTCCAAAAG+TGG - chr4_4:16309550-16309569 None:intergenic 35.0%
TAAGAACATCCAAACATGTC+AGG - chr4_4:16309596-16309615 None:intergenic 35.0%
!! AACTGATTTTGTCCCTGAAT+TGG + chr4_4:16309621-16309640 Msa0672120:intron 35.0%
! GTTCAAGTTAGAACCAATTC+AGG - chr4_4:16309637-16309656 None:intergenic 35.0%
AGAGTTTGACCAAATTACAG+TGG + chr4_4:16310058-16310077 Msa0672120:intron 35.0%
! ATCATAGTGCCACTGTAATT+TGG - chr4_4:16310070-16310089 None:intergenic 35.0%
ATGCTGTGACCTTTATATTG+CGG + chr4_4:16310214-16310233 Msa0672120:intron 35.0%
! TGCATTTTGCCGCAATATAA+AGG - chr4_4:16310226-16310245 None:intergenic 35.0%
AGCTGATATGGTCTAAATTG+CGG + chr4_4:16310255-16310274 Msa0672120:intron 35.0%
GTAAAGCACACAAATGATCA+AGG - chr4_4:16310492-16310511 None:intergenic 35.0%
TAGGTCAGGTTTATAAAGCT+CGG + chr4_4:16310639-16310658 Msa0672120:CDS 35.0%
TTTATAAAGCTCGGTTGAAG+CGG + chr4_4:16310648-16310667 Msa0672120:CDS 35.0%
CATTGAAGAAGCTATAGGAT+TGG + chr4_4:16310709-16310728 Msa0672120:CDS 35.0%
TTCTACCTCATTAGAGGTTT+AGG + chr4_4:16310734-16310753 Msa0672120:CDS 35.0%
TCTACCTCATTAGAGGTTTA+GGG + chr4_4:16310735-16310754 Msa0672120:CDS 35.0%
TCAAGAGCTTAATTATGTGC+AGG + chr4_4:16310835-16310854 Msa0672120:CDS 35.0%
!! TATGTGCAGGTTAGTTCTTT+TGG + chr4_4:16310848-16310867 Msa0672120:intron 35.0%
CATTATAAAGACGCCTCATT+GGG - chr4_4:16311191-16311210 None:intergenic 35.0%
GTATAGTCCCAAAAAACATC+AGG - chr4_4:16311546-16311565 None:intergenic 35.0%
ATGATCAAGAAGCAATTGAG+AGG + chr4_4:16311613-16311632 Msa0672120:CDS 35.0%
GAAGCGAGATTTGCAATAAT+TGG + chr4_4:16311804-16311823 Msa0672120:CDS 35.0%
TCAAAAAAGTTTCGAAGTGC+AGG - chr4_4:16311930-16311949 None:intergenic 35.0%
ATGTTAGTGTTGTATCTGTG+TGG + chr4_4:16312185-16312204 Msa0672120:intron 35.0%
! ACACCTTCAATCTAAAGTGT+CGG + chr4_4:16312211-16312230 Msa0672120:intron 35.0%
TCAGAATCTGCAAGAAAGTT+GGG - chr4_4:16312285-16312304 None:intergenic 35.0%
ATCAGAATCTGCAAGAAAGT+TGG - chr4_4:16312286-16312305 None:intergenic 35.0%
AATATCAACGCATAGTATGC+TGG - chr4_4:16312354-16312373 None:intergenic 35.0%
GCATCTCTTAGATATGGATT+TGG - chr4_4:16312480-16312499 None:intergenic 35.0%
! ATCAGAGCATCTCTTAGATA+TGG - chr4_4:16312486-16312505 None:intergenic 35.0%
!!! TCTGATTGAGTTGCTTTTCA+AGG + chr4_4:16312500-16312519 Msa0672120:CDS 35.0%
!!! ATTGAGTTGCTTTTCAAGGA+TGG + chr4_4:16312504-16312523 Msa0672120:CDS 35.0%
!! TTTTCAAGGATGGAAAGTTC+AGG + chr4_4:16312514-16312533 Msa0672120:CDS 35.0%
AACGGATAAAATGGAAAGGA+GGG - chr4_4:16312606-16312625 None:intergenic 35.0%
AGGAAAAAGACCAATAACTC+CGG + chr4_4:16312775-16312794 Msa0672120:intron 35.0%
GTTATTTACACCGGAGTTAT+TGG - chr4_4:16312788-16312807 None:intergenic 35.0%
!! CCTCCATTCCTTTTTATTTG+TGG - chr4_4:16312818-16312837 None:intergenic 35.0%
CCACAAATAAAAAGGAATGG+AGG + chr4_4:16312815-16312834 Msa0672120:intron 35.0%
!!! TGATTTTTTTCCGATGCAGA+TGG + chr4_4:16312865-16312884 Msa0672120:intron 35.0%
!! CTTGAAAACCTTCTAGTTCA+GGG + chr4_4:16312894-16312913 Msa0672120:CDS 35.0%
!! TTGAAAACCTTCTAGTTCAG+GGG + chr4_4:16312895-16312914 Msa0672120:CDS 35.0%
TAGAGATTTCTCTGCTAAAG+AGG + chr4_4:16312926-16312945 Msa0672120:CDS 35.0%
!! GTATCTGAAGCTTTTACTCT+CGG + chr4_4:16313029-16313048 Msa0672120:CDS 35.0%
TCAAAAAGTCAGGAACATAC+CGG - chr4_4:16313073-16313092 None:intergenic 35.0%
TCAGTTTCTGACATCATAAG+TGG - chr4_4:16313128-16313147 None:intergenic 35.0%
GAGATCAAGTGATTAGGATA+TGG + chr4_4:16313171-16313190 Msa0672120:CDS 35.0%
TAACTAAGGACACAATTGTG+AGG - chr4_4:16313625-16313644 None:intergenic 35.0%
CAAAGAATCGTATTATGCAC+AGG + chr4_4:16314019-16314038 Msa0672120:intron 35.0%
CGCTTTCTTATGCAATTACT+TGG + chr4_4:16314113-16314132 Msa0672120:CDS 35.0%
!! TATTGATAATGTGGAGGACT+AGG - chr4_4:16314364-16314383 None:intergenic 35.0%
! TTGATAACAGATTCAGCAGA+GGG - chr4_4:16314431-16314450 None:intergenic 35.0%
! TTTGATAACAGATTCAGCAG+AGG - chr4_4:16314432-16314451 None:intergenic 35.0%
CCACGTATAAACAAATTGTC+AGG - chr4_4:16314558-16314577 None:intergenic 35.0%
! CCTGACAATTTGTTTATACG+TGG + chr4_4:16314555-16314574 Msa0672120:intron 35.0%
! GACAATTTGTTTATACGTGG+GGG + chr4_4:16314558-16314577 Msa0672120:intron 35.0%
CCATATTAGAAATGGTGGTT+GGG - chr4_4:16314626-16314645 None:intergenic 35.0%
ACCATATTAGAAATGGTGGT+TGG - chr4_4:16314627-16314646 None:intergenic 35.0%
TGAAGCGTGAACATAAATGA+CGG - chr4_4:16314708-16314727 None:intergenic 35.0%
AGGTATTAGAAATGGTGGTT+GGG - chr4_4:16314858-16314877 None:intergenic 35.0%
TAGGTATTAGAAATGGTGGT+TGG - chr4_4:16314859-16314878 None:intergenic 35.0%
ATACCTACAAATACCTACAG+AGG + chr4_4:16314872-16314891 Msa0672120:intron 35.0%
TACCTACAAATACCTACAGA+GGG + chr4_4:16314873-16314892 Msa0672120:intron 35.0%
AATCAAATTTGTCCCTCTGT+AGG - chr4_4:16314888-16314907 None:intergenic 35.0%
! TTTGGAATATCACCAATACG+AGG + chr4_4:16314933-16314952 Msa0672120:three_prime_UTR 35.0%
TTGGAATATCACCAATACGA+GGG + chr4_4:16314934-16314953 Msa0672120:three_prime_UTR 35.0%
TTATTGTGGACAGAGAAGAT+AGG + chr4_4:16315077-16315096 Msa0672120:intron 35.0%
TATCGTCGTCATTATTGATG+CGG + chr4_4:16315220-16315239 Msa0672120:three_prime_UTR 35.0%
CATAAGTGTCTGTGCTACAA+AGG + chr4_4:16309047-16309066 Msa0672120:CDS 40.0%
!!! TGGTTTTGTTGTGTAGGTTG+CGG + chr4_4:16309196-16309215 Msa0672120:intron 40.0%
!!! CATTTGGGTTGAAGCTTTTG+TGG + chr4_4:16309252-16309271 Msa0672120:CDS 40.0%
TTGTCCATCTGAGTATCTTG+AGG + chr4_4:16309400-16309419 Msa0672120:CDS 40.0%
!! ATGTTTGGTTCCACTTTTGG+AGG + chr4_4:16309537-16309556 Msa0672120:intron 40.0%
CTCAAAGCTAAGTGTGTGTT+TGG - chr4_4:16309797-16309816 None:intergenic 40.0%
ACATGCACGAAATAGTCAAC+AGG - chr4_4:16310020-16310039 None:intergenic 40.0%
! CATGTGATTTTCTTGCCTCA+AGG + chr4_4:16310035-16310054 Msa0672120:intron 40.0%
ATTTGGTCAAACTCTCCTTG+AGG - chr4_4:16310053-16310072 None:intergenic 40.0%
GCAGAAAAATGCAGCTGATA+TGG + chr4_4:16310243-16310262 Msa0672120:intron 40.0%
TACAACTATGACCGCAATAC+AGG - chr4_4:16310309-16310328 None:intergenic 40.0%
TTGTGTGCTTTACCTTTACC+AGG + chr4_4:16310499-16310518 Msa0672120:intron 40.0%
TTCCCTCTCAATGCATTCAA+AGG - chr4_4:16310555-16310574 None:intergenic 40.0%
GAATGCATTGAGAGGGAATT+AGG + chr4_4:16310557-16310576 Msa0672120:CDS 40.0%
CTATAGCTTCTTCAATGCCA+GGG - chr4_4:16310706-16310725 None:intergenic 40.0%
TTGGACTTCTACCTCATTAG+AGG + chr4_4:16310728-16310747 Msa0672120:CDS 40.0%
GAAACCCTAAACCTCTAATG+AGG - chr4_4:16310742-16310761 None:intergenic 40.0%
CCATTATAAAGACGCCTCAT+TGG - chr4_4:16311192-16311211 None:intergenic 40.0%
! CCAATGAGGCGTCTTTATAA+TGG + chr4_4:16311189-16311208 Msa0672120:intron 40.0%
CTTTAGCTGTAAGTCGTTCA+CGG - chr4_4:16311221-16311240 None:intergenic 40.0%
TGAACGACTTACAGCTAAAG+CGG + chr4_4:16311221-16311240 Msa0672120:intron 40.0%
AACTTGAGCAAAGCTGCAAA+GGG - chr4_4:16311297-16311316 None:intergenic 40.0%
AAACTTGAGCAAAGCTGCAA+AGG - chr4_4:16311298-16311317 None:intergenic 40.0%
!! TAATTTTGACAGGTTCCTGC+AGG + chr4_4:16311461-16311480 Msa0672120:intron 40.0%
!! GAAGGTACTAACGATCGATT+GGG + chr4_4:16311572-16311591 Msa0672120:CDS 40.0%
AAGAAGCAATTGAGAGGCAA+GGG + chr4_4:16311619-16311638 Msa0672120:CDS 40.0%
GTCTTGGATCTAGTAAACAG+CGG + chr4_4:16311648-16311667 Msa0672120:CDS 40.0%
! TCCTCATCCTGGTAATCTTT+TGG + chr4_4:16311722-16311741 Msa0672120:CDS 40.0%
! TAATCTTTTGGCAACACCAG+AGG + chr4_4:16311734-16311753 Msa0672120:CDS 40.0%
! AATCTTTTGGCAACACCAGA+GGG + chr4_4:16311735-16311754 Msa0672120:CDS 40.0%
! AGAAAAGCAAGTTTTCCCTC+TGG - chr4_4:16311753-16311772 None:intergenic 40.0%
ATTGCAAATCTCGCTTCTTC+TGG - chr4_4:16311801-16311820 None:intergenic 40.0%
TTTCGAAGTGCAGGAACAAT+TGG - chr4_4:16311921-16311940 None:intergenic 40.0%
GCTTAACTTCAAGACGATTG+TGG + chr4_4:16311977-16311996 Msa0672120:CDS 40.0%
AACTTCAAGACGATTGTGGA+CGG + chr4_4:16311981-16312000 Msa0672120:CDS 40.0%
ATTAAGGTCTCTCACTGTTC+TGG + chr4_4:16312371-16312390 Msa0672120:CDS 40.0%
GCAGCAAGCACCTTAAAATT+GGG - chr4_4:16312420-16312439 None:intergenic 40.0%
TGCAGCAAGCACCTTAAAAT+TGG - chr4_4:16312421-16312440 None:intergenic 40.0%
CAACGGATAAAATGGAAAGG+AGG - chr4_4:16312607-16312626 None:intergenic 40.0%
! TTTTCCGATGCAGATGGAAT+AGG + chr4_4:16312871-16312890 Msa0672120:intron 40.0%
!! GCTTGAAAACCTTCTAGTTC+AGG + chr4_4:16312893-16312912 Msa0672120:CDS 40.0%
!! AAGGTATTGTTGAGTCCTGA+TGG + chr4_4:16312966-16312985 Msa0672120:CDS 40.0%
GCACAATTTCCGAAACATAC+CGG + chr4_4:16313051-16313070 Msa0672120:CDS 40.0%
AGGAACATACCGGTATGTTT+CGG - chr4_4:16313063-16313082 None:intergenic 40.0%
! GGTATGTTCCTGACTTTTTG+AGG + chr4_4:16313072-16313091 Msa0672120:CDS 40.0%
ACAAGGTTCCTCAAAAAGTC+AGG - chr4_4:16313083-16313102 None:intergenic 40.0%
TTGAGGAACCTTGTCTTCAA+TGG + chr4_4:16313089-16313108 Msa0672120:CDS 40.0%
TTGCATTGCCATTGAAGACA+AGG - chr4_4:16313100-16313119 None:intergenic 40.0%
TGTCTTCAATGGCAATGCAA+AGG + chr4_4:16313100-16313119 Msa0672120:CDS 40.0%
AGCTCAGAGATCAAGTGATT+AGG + chr4_4:16313165-16313184 Msa0672120:CDS 40.0%
!! AGTATCGGTAGCAAAAGAGA+TGG - chr4_4:16313227-16313246 None:intergenic 40.0%
! TCTTTTGCTACCGATACTAC+AGG + chr4_4:16313229-16313248 Msa0672120:CDS 40.0%
GGTAAAGACACAAGACAGAA+CGG - chr4_4:16313301-16313320 None:intergenic 40.0%
GCACCAAAACTTCAGATTGA+AGG - chr4_4:16313322-16313341 None:intergenic 40.0%
TTGAGGTCAAAACACGACAT+TGG - chr4_4:16313551-16313570 None:intergenic 40.0%
!! TCCTTAGTTAAAAGGCGCTT+CGG + chr4_4:16313635-16313654 Msa0672120:intron 40.0%
CATAGATTGTGTCACAGCAA+AGG + chr4_4:16314156-16314175 Msa0672120:exon 40.0%
! TTTTGCAATGGCGTCGTTAT+AGG + chr4_4:16314281-16314300 Msa0672120:three_prime_UTR 40.0%
ATGTGGGACTCTTAACAGTA+GGG - chr4_4:16314521-16314540 None:intergenic 40.0%
TACTGTTAAGAGTCCCACAT+CGG + chr4_4:16314521-16314540 Msa0672120:intron 40.0%
CCCAACCACCATTTCTAATA+TGG + chr4_4:16314623-16314642 Msa0672120:intron 40.0%
TGTTGTCAGGTTTCCGTTAT+CGG + chr4_4:16314677-16314696 Msa0672120:intron 40.0%
GAAGCGTGAACATAAATGAC+GGG - chr4_4:16314707-16314726 None:intergenic 40.0%
AGAAGGAGAAAATATGCAGG+TGG + chr4_4:16315405-16315424 Msa0672120:three_prime_UTR 40.0%
TCAACTTGCATTTGGCCATT+TGG + chr4_4:16315446-16315465 Msa0672120:three_prime_UTR 40.0%
CAACTTGCATTTGGCCATTT+GGG + chr4_4:16315447-16315466 Msa0672120:three_prime_UTR 40.0%
GAAATGCTCATAAGCCCAAA+TGG - chr4_4:16315464-16315483 None:intergenic 40.0%
!!! GGTTTTGTTGTGTAGGTTGC+GGG + chr4_4:16309197-16309216 Msa0672120:intron 45.0%
! CTTTTGTGGGAGCAGAGAAA+TGG + chr4_4:16309266-16309285 Msa0672120:CDS 45.0%
AGCTCCTCAAGATACTCAGA+TGG - chr4_4:16309407-16309426 None:intergenic 45.0%
!! AAAATCATGGTGTCACACCG+TGG + chr4_4:16310121-16310140 Msa0672120:intron 45.0%
GTTTGGATTCAAGGTGAGCT+TGG - chr4_4:16310152-16310171 None:intergenic 45.0%
AGACCTCATCTCCTGTATTG+CGG + chr4_4:16310295-16310314 Msa0672120:intron 45.0%
GTGCTTTACCTTTACCAGGA+TGG + chr4_4:16310503-16310522 Msa0672120:intron 45.0%
TTGGCAAACCATCCTGGTAA+AGG - chr4_4:16310514-16310533 None:intergenic 45.0%
GAAATGTTGGCAAACCATCC+TGG - chr4_4:16310520-16310539 None:intergenic 45.0%
TTTGCCAACATTTCCTGACG+AGG + chr4_4:16310526-16310545 Msa0672120:CDS 45.0%
ACGCCTTTGAATGCATTGAG+AGG + chr4_4:16310549-16310568 Msa0672120:CDS 45.0%
CGCCTTTGAATGCATTGAGA+GGG + chr4_4:16310550-16310569 Msa0672120:CDS 45.0%
TATCGGCGATGGAGATATTG+TGG - chr4_4:16310606-16310625 None:intergenic 45.0%
CCTAAACTAGCAGCAGCTAT+CGG - chr4_4:16310623-16310642 None:intergenic 45.0%
CCTATAGCTTCTTCAATGCC+AGG - chr4_4:16310707-16310726 None:intergenic 45.0%
! CCTGGCATTGAAGAAGCTAT+AGG + chr4_4:16310704-16310723 Msa0672120:CDS 45.0%
! GTAGGTGTTGTACCAGAACA+GGG - chr4_4:16311159-16311178 None:intergenic 45.0%
! TGTAGGTGTTGTACCAGAAC+AGG - chr4_4:16311160-16311179 None:intergenic 45.0%
AGCTAAAGCGGACAATACCT+CGG + chr4_4:16311233-16311252 Msa0672120:intron 45.0%
TTGGGACTATACAAGTGCGA+AGG + chr4_4:16311554-16311573 Msa0672120:CDS 45.0%
!! CGAAGGTACTAACGATCGAT+TGG + chr4_4:16311571-16311590 Msa0672120:CDS 45.0%
CAAGAAGCAATTGAGAGGCA+AGG + chr4_4:16311618-16311637 Msa0672120:CDS 45.0%
GCCAAAAGATTACCAGGATG+AGG - chr4_4:16311726-16311745 None:intergenic 45.0%
! GGTGTTGCCAAAAGATTACC+AGG - chr4_4:16311732-16311751 None:intergenic 45.0%
TAACCGAGACTACGAAGCTA+TGG + chr4_4:16311845-16311864 Msa0672120:CDS 45.0%
! GCACCGACACTTTAGATTGA+AGG - chr4_4:16312217-16312236 None:intergenic 45.0%
ATGCTGGAACTGCAAACAGA+TGG - chr4_4:16312338-16312357 None:intergenic 45.0%
CAAGCCTATTCCATCTGCAT+CGG - chr4_4:16312878-16312897 None:intergenic 45.0%
! CTTTTCTCCCCTGAACTAGA+AGG - chr4_4:16312905-16312924 None:intergenic 45.0%
TACCTTCAGGACAGGTTGTA+AGG - chr4_4:16312952-16312971 None:intergenic 45.0%
CTCAACAATACCTTCAGGAC+AGG - chr4_4:16312960-16312979 None:intergenic 45.0%
CAGGACTCAACAATACCTTC+AGG - chr4_4:16312965-16312984 None:intergenic 45.0%
TTCCTCAGAACTTCACCATC+AGG - chr4_4:16312984-16313003 None:intergenic 45.0%
TCAAAACACGACATTGGCGA+AGG - chr4_4:16313545-16313564 None:intergenic 45.0%
AAAGCAGTGCAGCAAACTTG+AGG - chr4_4:16313568-16313587 None:intergenic 45.0%
!!! TTTGCTGCACTGCTTTTTCG+AGG + chr4_4:16313572-16313591 Msa0672120:intron 45.0%
TTTCGAGGATTGTCTGCTTC+AGG + chr4_4:16313587-16313606 Msa0672120:intron 45.0%
!! ACCGAAGCGCCTTTTAACTA+AGG - chr4_4:16313639-16313658 None:intergenic 45.0%
!! TTAGTTAAAAGGCGCTTCGG+TGG + chr4_4:16313638-16313657 Msa0672120:intron 45.0%
!! TAGTTAAAAGGCGCTTCGGT+GGG + chr4_4:16313639-16313658 Msa0672120:intron 45.0%
TTGTCTGGGAAACGAGTCTA+AGG - chr4_4:16313692-16313711 None:intergenic 45.0%
GTATTGGAACAGTATCCCTG+CGG + chr4_4:16313728-16313747 Msa0672120:intron 45.0%
ATCCTTACTGATCCGGACAA+GGG - chr4_4:16313809-16313828 None:intergenic 45.0%
CAAGGTCATCCTTACTGATC+CGG - chr4_4:16313816-16313835 None:intergenic 45.0%
TGTGTCACAGCAAAGGCTAA+AGG + chr4_4:16314163-16314182 Msa0672120:three_prime_UTR 45.0%
GATGTGGGACTCTTAACAGT+AGG - chr4_4:16314522-16314541 None:intergenic 45.0%
! TTAAGAGTCCCACATCGGTT+AGG + chr4_4:16314526-16314545 Msa0672120:intron 45.0%
CTAACACAACCCCACAAAAC+CGG - chr4_4:16314602-16314621 None:intergenic 45.0%
TCAGAGCCTCTTCACGATTA+TGG + chr4_4:16314648-16314667 Msa0672120:intron 45.0%
CAGAGCCTCTTCACGATTAT+GGG + chr4_4:16314649-16314668 Msa0672120:intron 45.0%
!! GATAACGGAAACCTGACAAC+AGG - chr4_4:16314678-16314697 None:intergenic 45.0%
GTTGTCAGGTTTCCGTTATC+GGG + chr4_4:16314678-16314697 Msa0672120:intron 45.0%
ATGTGTAATCCTGAGCGTGA+GGG + chr4_4:16314729-16314748 Msa0672120:intron 45.0%
GTGTGTTAAGAGTCCCACAT+CGG + chr4_4:16314753-16314772 Msa0672120:intron 45.0%
! TTAAGAGTCCCACATCGGTT+AGG + chr4_4:16314526-16314545 Msa0672120:intron 45.0%
CTAACACAACCCCACAAAAC+CGG - chr4_4:16314602-16314621 None:intergenic 45.0%
GTCCCTCTGTAGGTATTTGT+AGG - chr4_4:16314878-16314897 None:intergenic 45.0%
ATATCACCAATACGAGGGAC+TGG + chr4_4:16314939-16314958 Msa0672120:three_prime_UTR 45.0%
ATCAATCCAGTCCCTCGTAT+TGG - chr4_4:16314948-16314967 None:intergenic 45.0%
AGGAGAAAATATGCAGGTGG+TGG + chr4_4:16315408-16315427 Msa0672120:three_prime_UTR 45.0%
TTGTTGTGTAGGTTGCGGGA+AGG + chr4_4:16309201-16309220 Msa0672120:intron 50.0%
TGTTGTGTAGGTTGCGGGAA+GGG + chr4_4:16309202-16309221 Msa0672120:intron 50.0%
AGGAGATGAGGTCTCCACAA+CGG - chr4_4:16310289-16310308 None:intergenic 50.0%
TGACCGCAATACAGGAGATG+AGG - chr4_4:16310301-16310320 None:intergenic 50.0%
! CCGATAGCTGCTGCTAGTTT+AGG + chr4_4:16310620-16310639 Msa0672120:CDS 50.0%
! AGCTGCTGCTAGTTTAGGTC+AGG + chr4_4:16310625-16310644 Msa0672120:CDS 50.0%
TAAAGCTCGGTTGAAGCGGT+CGG + chr4_4:16310652-16310671 Msa0672120:CDS 50.0%
!! CTCATTGGGTTGAGGAGTGT+AGG - chr4_4:16311177-16311196 None:intergenic 50.0%
CTACACTCCTCAACCCAATG+AGG + chr4_4:16311175-16311194 Msa0672120:intron 50.0%
! AAAGACGCCTCATTGGGTTG+AGG - chr4_4:16311185-16311204 None:intergenic 50.0%
! TTTTGACAGGTTCCTGCAGG+AGG + chr4_4:16311464-16311483 Msa0672120:intron 50.0%
TTTGACAGGTTCCTGCAGGA+GGG + chr4_4:16311465-16311484 Msa0672120:intron 50.0%
! TTGCATTTTGTCCCTCCTGC+AGG - chr4_4:16311479-16311498 None:intergenic 50.0%
TGCAGGAGGGACAAAATGCA+AGG + chr4_4:16311478-16311497 Msa0672120:intron 50.0%
CTAACGATCGATTGGGTCGA+AGG + chr4_4:16311579-16311598 Msa0672120:CDS 50.0%
CTCAGACAACTGCTCGAGTA+CGG + chr4_4:16311684-16311703 Msa0672120:CDS 50.0%
TTCCATGCAGATCCTCATCC+TGG + chr4_4:16311711-16311730 Msa0672120:CDS 50.0%
TACCAGGATGAGGATCTGCA+TGG - chr4_4:16311716-16311735 None:intergenic 50.0%
GAGCCATAGCTTCGTAGTCT+CGG - chr4_4:16311851-16311870 None:intergenic 50.0%
AAGACGATTGTGGACGGTCT+CGG + chr4_4:16311987-16312006 Msa0672120:CDS 50.0%
CGATGCTGACATTGACACAC+AGG + chr4_4:16312146-16312165 Msa0672120:intron 50.0%
! AGGTCTCTCACTGTTCTGGA+AGG + chr4_4:16312375-16312394 Msa0672120:CDS 50.0%
! GTCCTGATGGTGAAGTTCTG+AGG + chr4_4:16312979-16312998 Msa0672120:CDS 50.0%
GAGGCTAAGGAGTTAGAGGA+TGG + chr4_4:16313753-16313772 Msa0672120:intron 50.0%
TCCTTACTGATCCGGACAAG+GGG - chr4_4:16313808-16313827 None:intergenic 50.0%
CATCCTTACTGATCCGGACA+AGG - chr4_4:16313810-16313829 None:intergenic 50.0%
AACCTGAGGCCCGTAAACTT+GGG + chr4_4:16314051-16314070 Msa0672120:CDS 50.0%
!! ACCTCAGAAGCCGGTTTTGT+GGG + chr4_4:16314589-16314608 Msa0672120:intron 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG + chr4_4:16314600-16314619 Msa0672120:intron 50.0%
ATTATGGGCCACCTGTTGTC+AGG + chr4_4:16314664-16314683 Msa0672120:intron 50.0%
AACGGAAACCTGACAACAGG+TGG - chr4_4:16314675-16314694 None:intergenic 50.0%
! GCGTGAACATAAATGACGGG+TGG - chr4_4:16314704-16314723 None:intergenic 50.0%
GATGTGTAATCCTGAGCGTG+AGG + chr4_4:16314728-16314747 Msa0672120:intron 50.0%
TGTGTAATCCTGAGCGTGAG+GGG + chr4_4:16314730-16314749 Msa0672120:intron 50.0%
!! ACCTCAGAAGCCGGTTTTGT+GGG + chr4_4:16314589-16314608 Msa0672120:intron 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG + chr4_4:16314600-16314619 Msa0672120:intron 50.0%
TGGGTCAAGGGCTGTCTACT+AGG + chr4_4:16309369-16309388 Msa0672120:CDS 55.0%
TCAAGGGCTGTCTACTAGGC+CGG + chr4_4:16309373-16309392 Msa0672120:CDS 55.0%
AGGTGAGCTTGGCTGAACCA+CGG - chr4_4:16310141-16310160 None:intergenic 55.0%
GCGTCCTCGTCAGGAAATGT+TGG - chr4_4:16310533-16310552 None:intergenic 55.0%
!! CATTCAAAGGCGTCCTCGTC+AGG - chr4_4:16310542-16310561 None:intergenic 55.0%
AAAGCTCGGTTGAAGCGGTC+GGG + chr4_4:16310653-16310672 Msa0672120:CDS 55.0%
GGGCAAAGTTGTTGCGGTCA+AGG + chr4_4:16310673-16310692 Msa0672120:CDS 55.0%
CTTCTTCAATGCCAGGGCGT+TGG - chr4_4:16310700-16310719 None:intergenic 55.0%
GCGGACAATACCTCGGAATG+CGG + chr4_4:16311240-16311259 Msa0672120:intron 55.0%
CAATACCTCGGAATGCGGTG+TGG + chr4_4:16311245-16311264 Msa0672120:intron 55.0%
AATGCGGTGTGGCGTACTTG+AGG + chr4_4:16311256-16311275 Msa0672120:intron 55.0%
GAGGCAAGGGCTTAACGTCT+TGG + chr4_4:16311632-16311651 Msa0672120:CDS 55.0%
GGCCTTACAACCTGTCCTGA+AGG + chr4_4:16312947-16312966 Msa0672120:CDS 55.0%
GGTCGAGGCTAAGGAGTTAG+AGG + chr4_4:16313749-16313768 Msa0672120:intron 55.0%
TTAGCCCACGTGTGTGGCTT+AGG + chr4_4:16313780-16313799 Msa0672120:intron 55.0%
CTTACTGATCCGGACAAGGG+GGG - chr4_4:16313806-16313825 None:intergenic 55.0%
CCTTACTGATCCGGACAAGG+GGG - chr4_4:16313807-16313826 None:intergenic 55.0%
ACAGGTGCTTCAGCAACCTG+AGG + chr4_4:16314037-16314056 Msa0672120:intron 55.0%
CAACCTGAGGCCCGTAAACT+TGG + chr4_4:16314050-16314069 Msa0672120:CDS 55.0%
ACCTGAGGCCCGTAAACTTG+GGG + chr4_4:16314052-16314071 Msa0672120:CDS 55.0%
AACACGCCCCCCAAGTTTAC+GGG - chr4_4:16314063-16314082 None:intergenic 55.0%
CAACACGCCCCCCAAGTTTA+CGG - chr4_4:16314064-16314083 None:intergenic 55.0%
! AAACTTGGGGGGCGTGTTGT+CGG + chr4_4:16314065-16314084 Msa0672120:CDS 55.0%
! GTCCCACATCGGTTAGGAGT+TGG + chr4_4:16314532-16314551 Msa0672120:intron 55.0%
GGCCAACTCCTAACCGATGT+GGG - chr4_4:16314537-16314556 None:intergenic 55.0%
AGGCCAACTCCTAACCGATG+TGG - chr4_4:16314538-16314557 None:intergenic 55.0%
GCAATCCTCACCTCAGAAGC+CGG + chr4_4:16314580-16314599 Msa0672120:intron 55.0%
!! CAAAACCGGCTTCTGAGGTG+AGG - chr4_4:16314588-16314607 None:intergenic 55.0%
!! CACCTCAGAAGCCGGTTTTG+TGG + chr4_4:16314588-16314607 Msa0672120:intron 55.0%
!! CCTCAGAAGCCGGTTTTGTG+GGG + chr4_4:16314590-16314609 Msa0672120:intron 55.0%
GGTGGCCCATAATCGTGAAG+AGG - chr4_4:16314657-16314676 None:intergenic 55.0%
!! AATGACGGGTGGCCCGATAA+CGG - chr4_4:16314693-16314712 None:intergenic 55.0%
GTGTAATCCTGAGCGTGAGG+GGG + chr4_4:16314731-16314750 Msa0672120:intron 55.0%
! GTCCCACATCGGTTAGGAGT+TGG + chr4_4:16314532-16314551 Msa0672120:intron 55.0%
GGCCAACTCCTAACCGATGT+GGG - chr4_4:16314537-16314556 None:intergenic 55.0%
AGGCCAACTCCTAACCGATG+TGG - chr4_4:16314538-16314557 None:intergenic 55.0%
GCAATCCTCACCTCAGAAGC+CGG + chr4_4:16314580-16314599 Msa0672120:intron 55.0%
!! CAAAACCGGCTTCTGAGGTG+AGG - chr4_4:16314588-16314607 None:intergenic 55.0%
!! CACCTCAGAAGCCGGTTTTG+TGG + chr4_4:16314588-16314607 Msa0672120:intron 55.0%
!! CCTCAGAAGCCGGTTTTGTG+GGG + chr4_4:16314590-16314609 Msa0672120:intron 55.0%
TTGCGGCTGTGATGCCGTTG+TGG + chr4_4:16310272-16310291 Msa0672120:intron 60.0%
CTAGCAGCAGCTATCGGCGA+TGG - chr4_4:16310617-16310636 None:intergenic 60.0%
GCGGTCGGGCAAAGTTGTTG+CGG + chr4_4:16310667-16310686 Msa0672120:CDS 60.0%
CGGTGTGGCGTACTTGAGGA+TGG + chr4_4:16311260-16311279 Msa0672120:intron 60.0%
GAACAGTATCCCTGCGGTCG+AGG + chr4_4:16313734-16313753 Msa0672120:intron 60.0%
TATCCCTGCGGTCGAGGCTA+AGG + chr4_4:16313740-16313759 Msa0672120:intron 60.0%
ACTCCTTAGCCTCGACCGCA+GGG - chr4_4:16313746-16313765 None:intergenic 60.0%
AACTCCTTAGCCTCGACCGC+AGG - chr4_4:16313747-16313766 None:intergenic 60.0%
! AGCCACACACGTGGGCTAAC+AGG - chr4_4:16313779-16313798 None:intergenic 60.0%
CCCCCTTGTCCGGATCAGTA+AGG + chr4_4:16313804-16313823 Msa0672120:intron 60.0%
CCTGAGGCCCGTAAACTTGG+GGG + chr4_4:16314053-16314072 Msa0672120:CDS 60.0%
CTGAGGCCCGTAAACTTGGG+GGG + chr4_4:16314054-16314073 Msa0672120:CDS 60.0%
! CCCCACAAAACCGGCTTCTG+AGG - chr4_4:16314593-16314612 None:intergenic 60.0%
TAACACACCCCCTCACGCTC+AGG - chr4_4:16314741-16314760 None:intergenic 60.0%
! CCCCACAAAACCGGCTTCTG+AGG - chr4_4:16314593-16314612 None:intergenic 60.0%
GTACGCCACACCGCATTCCG+AGG - chr4_4:16311253-16311272 None:intergenic 65.0%
GGCCTGTTAGCCCACGTGTG+TGG + chr4_4:16313774-16313793 Msa0672120:intron 65.0%
GGGGCCTAAGCCACACACGT+GGG - chr4_4:16313787-16313806 None:intergenic 65.0%
TGGCTTAGGCCCCCCTTGTC+CGG + chr4_4:16313794-16313813 Msa0672120:intron 65.0%
CCCCCAAGTTTACGGGCCTC+AGG - chr4_4:16314056-16314075 None:intergenic 65.0%
GCGGTCAAGGTCCAACGCCC+TGG + chr4_4:16310686-16310705 Msa0672120:CDS 70.0%
GGGGGCCTAAGCCACACACG+TGG - chr4_4:16313788-16313807 None:intergenic 70.0%
! CTTGGGGGGCGTGTTGTCGG+TGG + chr4_4:16314068-16314087 Msa0672120:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 16309011 16315567 16309011 ID=Msa0672120;Name=Msa0672120
chr4_4 mRNA 16309011 16315567 16309011 ID=Msa0672120-mRNA-1;Parent=Msa0672120;Name=Msa0672120-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.75|0.77|0.88|0.75|0.66|9|1017|627
chr4_4 exon 16309011 16309100 16309011 ID=Msa0672120-mRNA-1:exon:4903;Parent=Msa0672120-mRNA-1
chr4_4 exon 16309212 16309439 16309212 ID=Msa0672120-mRNA-1:exon:4904;Parent=Msa0672120-mRNA-1
chr4_4 exon 16310521 16310856 16310521 ID=Msa0672120-mRNA-1:exon:4905;Parent=Msa0672120-mRNA-1
chr4_4 exon 16311483 16312038 16311483 ID=Msa0672120-mRNA-1:exon:4906;Parent=Msa0672120-mRNA-1
chr4_4 exon 16312349 16312535 16312349 ID=Msa0672120-mRNA-1:exon:4907;Parent=Msa0672120-mRNA-1
chr4_4 exon 16312884 16313250 16312884 ID=Msa0672120-mRNA-1:exon:4908;Parent=Msa0672120-mRNA-1
chr4_4 exon 16314041 16314519 16314041 ID=Msa0672120-mRNA-1:exon:4909;Parent=Msa0672120-mRNA-1
chr4_4 exon 16314876 16315057 16314876 ID=Msa0672120-mRNA-1:exon:4910;Parent=Msa0672120-mRNA-1
chr4_4 exon 16315092 16315567 16315092 ID=Msa0672120-mRNA-1:exon:4911;Parent=Msa0672120-mRNA-1
chr4_4 CDS 16309011 16309100 16309011 ID=Msa0672120-mRNA-1:cds;Parent=Msa0672120-mRNA-1
chr4_4 CDS 16309212 16309439 16309212 ID=Msa0672120-mRNA-1:cds;Parent=Msa0672120-mRNA-1
chr4_4 CDS 16310521 16310856 16310521 ID=Msa0672120-mRNA-1:cds;Parent=Msa0672120-mRNA-1
chr4_4 CDS 16311483 16312038 16311483 ID=Msa0672120-mRNA-1:cds;Parent=Msa0672120-mRNA-1
chr4_4 CDS 16312349 16312535 16312349 ID=Msa0672120-mRNA-1:cds;Parent=Msa0672120-mRNA-1
chr4_4 CDS 16312884 16313250 16312884 ID=Msa0672120-mRNA-1:cds;Parent=Msa0672120-mRNA-1
chr4_4 CDS 16314041 16314160 16314041 ID=Msa0672120-mRNA-1:cds;Parent=Msa0672120-mRNA-1
chr4_4 three_prime_UTR 16314161 16314519 16314161 ID=Msa0672120-mRNA-1:three_prime_utr;Parent=Msa0672120-mRNA-1
chr4_4 three_prime_UTR 16314876 16315057 16314876 ID=Msa0672120-mRNA-1:three_prime_utr;Parent=Msa0672120-mRNA-1
chr4_4 three_prime_UTR 16315092 16315567 16315092 ID=Msa0672120-mRNA-1:three_prime_utr;Parent=Msa0672120-mRNA-1
Gene Sequence

>Msa0672120

ATGGACGTGCTACACGTCTTCAATCACGTCTTTGATCATAAGTGTCTGTGCTACAAAGGTTTTGACTGTTTTTGTGAATATCTTTTGTGGGTTGCGGGAAGGGCATTTCAGATTGTGTTTAATTTGGGTTCATTTGGGTTGAAGCTTTTGTGGGAGCAGAGAAATGGAGTTGCTGATCAGAATAAAAGGATTCGTGCTATTGAGCTTAGAAATATATTCACTAAGCTTGGACCAACTTTTGTCAAATTGGGTCAAGGGCTGTCTACTAGGCCGGATATTTGTCCATCTGAGTATCTTGAGGAGCTTTCTGAACTTCAAGATGGTTTGCCAACATTTCCTGACGAGGACGCCTTTGAATGCATTGAGAGGGAATTAGGTTTATCTCTCGACTCTATTTTCTCCACAATATCTCCATCGCCGATAGCTGCTGCTAGTTTAGGTCAGGTTTATAAAGCTCGGTTGAAGCGGTCGGGCAAAGTTGTTGCGGTCAAGGTCCAACGCCCTGGCATTGAAGAAGCTATAGGATTGGACTTCTACCTCATTAGAGGTTTAGGGTTTCTAATAAATAAATATGTGGATCGAATCACAACTGATGTTGTTGCACTTATTGATGAGTTCGCATGTAGAGTCTTTCAAGAGCTTAATTATGTGCAGGAGGGACAAAATGCAAGGAAATTCAAAAAATTGTATGCTGACAAGGAAGATATCTTAGTTCCTGATGTTTTTTGGGACTATACAAGTGCGAAGGTACTAACGATCGATTGGGTCGAAGGAGTAAAACTAAATGATCAAGAAGCAATTGAGAGGCAAGGGCTTAACGTCTTGGATCTAGTAAACAGCGGAATACAGTGCAGTCTCAGACAACTGCTCGAGTACGGATATTTCCATGCAGATCCTCATCCTGGTAATCTTTTGGCAACACCAGAGGGAAAACTTGCTTTTCTTGATTTCGGGATGATGAGTGAGACTCCAGAAGAAGCGAGATTTGCAATAATTGGTCACGTTGTTCACTTAGTTAACCGAGACTACGAAGCTATGGCTCAAGACTATTATGCTCTTGATTTCTTATCTAGGGATATTGATGTATCTCCAATTGTTCCTGCACTTCGAAACTTTTTTGACGATGCACTTAATTATACTGTTAGCGAGCTTAACTTCAAGACGATTGTGGACGGTCTCGGAAATGTTTTGTATCAATATCCATTTAATGTTCCAGCATACTATGCGTTGATATTAAGGTCTCTCACTGTTCTGGAAGGTTTAGCACTATATGCTGATCCCAATTTTAAGGTGCTTGCTGCATCATATCCCTATTTTGCTAAAAGGCTTCTAACGGATCCAAATCCATATCTAAGAGATGCTCTGATTGAGTTGCTTTTCAAGGATGGAAAGTTCAGATGGAATAGGCTTGAAAACCTTCTAGTTCAGGGGAGAAAAGATAGAGATTTCTCTGCTAAAGAGGCCTTACAACCTGTCCTGAAGGTATTGTTGAGTCCTGATGGTGAAGTTCTGAGGAATCTAGTTATCAAAGAAGCTATTCGTGTATCTGAAGCTTTTACTCTCGGCACAATTTCCGAAACATACCGGTATGTTCCTGACTTTTTGAGGAACCTTGTCTTCAATGGCAATGCAAAGGATCCACTTATGATGTCAGAAACTGAAAGACAAAGCATCATAGAGCTCAGAGATCAAGTGATTAGGATATGGAGACTTCTGCAATCATCTAATGATTTTGATCCATCTCTTTTGCTACCGATACTACAGGTGCTTCAGCAACCTGAGGCCCGTAAACTTGGGGGGCGTGTTGTCGGTGGAATCACTCAACGACTTGCAGCACGCTTTCTTATGCAATTACTTGGAGCACCAAAAACAACATCTACATAG
Protein sequence

>Msa0672120

MDVLHVFNHVFDHKCLCYKGFDCFCEYLLWVAGRAFQIVFNLGSFGLKLLWEQRNGVADQNKRIRAIELRNIFTKLGPTFVKLGQGLSTRPDICPSEYLEELSELQDGLPTFPDEDAFECIERELGLSLDSIFSTISPSPIAAASLGQVYKARLKRSGKVVAVKVQRPGIEEAIGLDFYLIRGLGFLINKYVDRITTDVVALIDEFACRVFQELNYVQEGQNARKFKKLYADKEDILVPDVFWDYTSAKVLTIDWVEGVKLNDQEAIERQGLNVLDLVNSGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEAMAQDYYALDFLSRDIDVSPIVPALRNFFDDALNYTVSELNFKTIVDGLGNVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALIELLFKDGKFRWNRLENLLVQGRKDRDFSAKEALQPVLKVLLSPDGEVLRNLVIKEAIRVSEAFTLGTISETYRYVPDFLRNLVFNGNAKDPLMMSETERQSIIELRDQVIRIWRLLQSSNDFDPSLLLPILQVLQQPEARKLGGRVVGGITQRLAARFLMQLLGAPKTTST*