Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863440 | XP_003617666.2 | 99.282 | 418 | 3 | 0 | 1 | 418 | 1 | 418 | 0.0 | 835 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863440 | sp|Q42545|FTSZ1_ARATH | 85.445 | 371 | 51 | 2 | 50 | 418 | 64 | 433 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863440 | Q5JZT9 | 99.282 | 418 | 3 | 0 | 1 | 418 | 1 | 418 | 0.0 | 835 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0863440 | 0.848070 | 7.744970e-60 | -8.615850e-47 |
| Msa0003470 | Msa0863440 | 0.809237 | 2.089189e-50 | -8.615850e-47 |
| Msa0006870 | Msa0863440 | 0.804935 | 1.701100e-49 | -8.615850e-47 |
| Msa0012460 | Msa0863440 | 0.805696 | 1.178668e-49 | -8.615850e-47 |
| Msa0017120 | Msa0863440 | 0.814275 | 1.673519e-51 | -8.615850e-47 |
| Msa0017940 | Msa0863440 | 0.823735 | 1.180271e-53 | -8.615850e-47 |
| Msa0030730 | Msa0863440 | 0.800209 | 1.604259e-48 | -8.615850e-47 |
| Msa0032120 | Msa0863440 | 0.824722 | 6.918026e-54 | -8.615850e-47 |
| Msa0032400 | Msa0863440 | 0.822780 | 1.972033e-53 | -8.615850e-47 |
| Msa0041540 | Msa0863440 | 0.807837 | 4.157937e-50 | -8.615850e-47 |
| Msa0043680 | Msa0863440 | 0.802256 | 6.115217e-49 | -8.615850e-47 |
| Msa0048020 | Msa0863440 | 0.806031 | 1.002063e-49 | -8.615850e-47 |
| Msa0049990 | Msa0863440 | 0.810760 | 9.819726e-51 | -8.615850e-47 |
| Msa0050580 | Msa0863440 | 0.829813 | 4.172059e-55 | -8.615850e-47 |
| Msa0065390 | Msa0863440 | 0.829520 | 4.917439e-55 | -8.615850e-47 |
| Msa0077910 | Msa0863440 | 0.815732 | 7.949282e-52 | -8.615850e-47 |
| Msa0078090 | Msa0863440 | 0.818207 | 2.211221e-52 | -8.615850e-47 |
| Msa0082820 | Msa0863440 | 0.860778 | 1.629588e-63 | -8.615850e-47 |
| Msa0084680 | Msa0863440 | 0.816630 | 5.008600e-52 | -8.615850e-47 |
| Msa0092180 | Msa0863440 | 0.823920 | 1.068051e-53 | -8.615850e-47 |
| Msa0092660 | Msa0863440 | 0.827052 | 1.935164e-54 | -8.615850e-47 |
| Msa0092730 | Msa0863440 | 0.819659 | 1.033871e-52 | -8.615850e-47 |
| Msa0100570 | Msa0863440 | 0.805498 | 1.296738e-49 | -8.615850e-47 |
| Msa0100860 | Msa0863440 | 0.807375 | 5.213451e-50 | -8.615850e-47 |
| Msa0110710 | Msa0863440 | 0.826856 | 2.155635e-54 | -8.615850e-47 |
| Msa0112290 | Msa0863440 | 0.809071 | 2.267850e-50 | -8.615850e-47 |
| Msa0607600 | Msa0863440 | -0.804076 | 2.569445e-49 | -8.615850e-47 |
| Msa0610860 | Msa0863440 | 0.808064 | 3.721429e-50 | -8.615850e-47 |
| Msa0637850 | Msa0863440 | 0.845784 | 3.271394e-59 | -8.615850e-47 |
| Msa0639370 | Msa0863440 | 0.861750 | 8.234854e-64 | -8.615850e-47 |
| Msa0640880 | Msa0863440 | 0.802436 | 5.614754e-49 | -8.615850e-47 |
| Msa0642650 | Msa0863440 | 0.800733 | 1.254971e-48 | -8.615850e-47 |
| Msa0647110 | Msa0863440 | 0.810185 | 1.306888e-50 | -8.615850e-47 |
| Msa0647460 | Msa0863440 | 0.801073 | 1.069474e-48 | -8.615850e-47 |
| Msa0659920 | Msa0863440 | 0.831873 | 1.303917e-55 | -8.615850e-47 |
| Msa0661470 | Msa0863440 | 0.804740 | 1.868593e-49 | -8.615850e-47 |
| Msa0681890 | Msa0863440 | 0.828504 | 8.668059e-55 | -8.615850e-47 |
| Msa0686240 | Msa0863440 | 0.838743 | 2.399448e-57 | -8.615850e-47 |
| Msa0687860 | Msa0863440 | -0.807494 | 4.917529e-50 | -8.615850e-47 |
| Msa0690500 | Msa0863440 | 0.803148 | 4.003105e-49 | -8.615850e-47 |
| Msa0703720 | Msa0863440 | 0.843374 | 1.457224e-58 | -8.615850e-47 |
| Msa0703760 | Msa0863440 | 0.859788 | 3.245920e-63 | -8.615850e-47 |
| Msa0706580 | Msa0863440 | 0.829797 | 4.210337e-55 | -8.615850e-47 |
| Msa0707780 | Msa0863440 | 0.804972 | 1.671408e-49 | -8.615850e-47 |
| Msa0709480 | Msa0863440 | 0.838598 | 2.615056e-57 | -8.615850e-47 |
| Msa0717090 | Msa0863440 | 0.848255 | 6.884802e-60 | -8.615850e-47 |
| Msa0730180 | Msa0863440 | 0.818317 | 2.087916e-52 | -8.615850e-47 |
| Msa0761790 | Msa0863440 | 0.828815 | 7.289543e-55 | -8.615850e-47 |
| Msa0766470 | Msa0863440 | 0.809924 | 1.487817e-50 | -8.615850e-47 |
| Msa0790180 | Msa0863440 | 0.831966 | 1.236953e-55 | -8.615850e-47 |
| Msa0790830 | Msa0863440 | 0.823368 | 1.437889e-53 | -8.615850e-47 |
| Msa0803130 | Msa0863440 | 0.805417 | 1.348759e-49 | -8.615850e-47 |
| Msa0804110 | Msa0863440 | 0.845427 | 4.090053e-59 | -8.615850e-47 |
| Msa0841490 | Msa0863440 | 0.803449 | 3.467730e-49 | -8.615850e-47 |
| Msa0842220 | Msa0863440 | 0.814412 | 1.561043e-51 | -8.615850e-47 |
| Msa0122210 | Msa0863440 | 0.802065 | 6.696274e-49 | -8.615850e-47 |
| Msa0125800 | Msa0863440 | 0.823204 | 1.571304e-53 | -8.615850e-47 |
| Msa0135980 | Msa0863440 | 0.815030 | 1.139311e-51 | -8.615850e-47 |
| Msa0137600 | Msa0863440 | 0.808184 | 3.507562e-50 | -8.615850e-47 |
| Msa0141430 | Msa0863440 | 0.802915 | 4.472712e-49 | -8.615850e-47 |
| Msa0141830 | Msa0863440 | 0.822821 | 1.929878e-53 | -8.615850e-47 |
| Msa0144340 | Msa0863440 | 0.814588 | 1.427617e-51 | -8.615850e-47 |
| Msa0152380 | Msa0863440 | 0.802783 | 4.763174e-49 | -8.615850e-47 |
| Msa0155550 | Msa0863440 | 0.807820 | 4.192440e-50 | -8.615850e-47 |
| Msa0157020 | Msa0863440 | 0.805040 | 1.617183e-49 | -8.615850e-47 |
| Msa0157350 | Msa0863440 | 0.816617 | 5.042267e-52 | -8.615850e-47 |
| Msa0164540 | Msa0863440 | 0.803638 | 3.169142e-49 | -8.615850e-47 |
| Msa0170440 | Msa0863440 | 0.819140 | 1.357538e-52 | -8.615850e-47 |
| Msa0175280 | Msa0863440 | 0.813781 | 2.151134e-51 | -8.615850e-47 |
| Msa0176710 | Msa0863440 | 0.821253 | 4.455466e-53 | -8.615850e-47 |
| Msa0177280 | Msa0863440 | 0.822731 | 2.024642e-53 | -8.615850e-47 |
| Msa0185390 | Msa0863440 | 0.800677 | 1.288471e-48 | -8.615850e-47 |
| Msa0185550 | Msa0863440 | 0.803660 | 3.134632e-49 | -8.615850e-47 |
| Msa0185700 | Msa0863440 | 0.829933 | 3.901213e-55 | -8.615850e-47 |
| Msa0197900 | Msa0863440 | 0.829082 | 6.279471e-55 | -8.615850e-47 |
| Msa0223280 | Msa0863440 | 0.807324 | 5.344188e-50 | -8.615850e-47 |
| Msa0223390 | Msa0863440 | 0.803112 | 4.071977e-49 | -8.615850e-47 |
| Msa0224960 | Msa0863440 | 0.817819 | 2.705299e-52 | -8.615850e-47 |
| Msa0225010 | Msa0863440 | 0.832666 | 8.299937e-56 | -8.615850e-47 |
| Msa0367370 | Msa0863440 | 0.822172 | 2.730626e-53 | -8.615850e-47 |
| Msa0377560 | Msa0863440 | 0.817167 | 3.795595e-52 | -8.615850e-47 |
| Msa0377630 | Msa0863440 | 0.808435 | 3.101490e-50 | -8.615850e-47 |
| Msa0379110 | Msa0863440 | 0.805878 | 1.079251e-49 | -8.615850e-47 |
| Msa0379450 | Msa0863440 | 0.804764 | 1.847216e-49 | -8.615850e-47 |
| Msa0380420 | Msa0863440 | 0.815754 | 7.862407e-52 | -8.615850e-47 |
| Msa0382500 | Msa0863440 | 0.813751 | 2.183949e-51 | -8.615850e-47 |
| Msa0388720 | Msa0863440 | 0.827156 | 1.828114e-54 | -8.615850e-47 |
| Msa0399180 | Msa0863440 | 0.819864 | 9.283552e-53 | -8.615850e-47 |
| Msa0415050 | Msa0863440 | 0.807465 | 4.989280e-50 | -8.615850e-47 |
| Msa0415880 | Msa0863440 | 0.814342 | 1.617810e-51 | -8.615850e-47 |
| Msa0417630 | Msa0863440 | 0.832396 | 9.680611e-56 | -8.615850e-47 |
| Msa0426730 | Msa0863440 | 0.815155 | 1.068442e-51 | -8.615850e-47 |
| Msa0429270 | Msa0863440 | 0.814859 | 1.242882e-51 | -8.615850e-47 |
| Msa0432680 | Msa0863440 | 0.809523 | 1.814068e-50 | -8.615850e-47 |
| Msa0476150 | Msa0863440 | 0.802820 | 4.678240e-49 | -8.615850e-47 |
| Msa0239660 | Msa0863440 | 0.802263 | 6.094443e-49 | -8.615850e-47 |
| Msa0246690 | Msa0863440 | 0.844855 | 5.836894e-59 | -8.615850e-47 |
| Msa0247310 | Msa0863440 | 0.802522 | 5.390760e-49 | -8.615850e-47 |
| Msa0255990 | Msa0863440 | 0.818069 | 2.376171e-52 | -8.615850e-47 |
| Msa0257130 | Msa0863440 | 0.819381 | 1.196619e-52 | -8.615850e-47 |
| Msa0259980 | Msa0863440 | 0.806564 | 7.738005e-50 | -8.615850e-47 |
| Msa0280140 | Msa0863440 | 0.839302 | 1.718830e-57 | -8.615850e-47 |
| Msa0285130 | Msa0863440 | 0.822010 | 2.978053e-53 | -8.615850e-47 |
| Msa0285740 | Msa0863440 | 0.825154 | 5.471109e-54 | -8.615850e-47 |
| Msa0308430 | Msa0863440 | 0.825175 | 5.410799e-54 | -8.615850e-47 |
| Msa0314790 | Msa0863440 | 0.803248 | 3.815894e-49 | -8.615850e-47 |
| Msa0317260 | Msa0863440 | 0.830268 | 3.231516e-55 | -8.615850e-47 |
| Msa0323990 | Msa0863440 | 0.810897 | 9.170468e-51 | -8.615850e-47 |
| Msa0334780 | Msa0863440 | 0.819751 | 9.850730e-53 | -8.615850e-47 |
| Msa0339860 | Msa0863440 | 0.813081 | 3.065813e-51 | -8.615850e-47 |
| Msa0362840 | Msa0863440 | 0.807123 | 5.895157e-50 | -8.615850e-47 |
| Msa0504740 | Msa0863440 | 0.822945 | 1.805237e-53 | -8.615850e-47 |
| Msa0519200 | Msa0863440 | 0.809038 | 2.305475e-50 | -8.615850e-47 |
| Msa0524120 | Msa0863440 | 0.804024 | 2.633774e-49 | -8.615850e-47 |
| Msa0532840 | Msa0863440 | 0.814113 | 1.817724e-51 | -8.615850e-47 |
| Msa0533010 | Msa0863440 | 0.806685 | 7.295994e-50 | -8.615850e-47 |
| Msa0538570 | Msa0863440 | 0.808343 | 3.244229e-50 | -8.615850e-47 |
| Msa0546740 | Msa0863440 | 0.801135 | 1.038848e-48 | -8.615850e-47 |
| Msa0546840 | Msa0863440 | 0.838039 | 3.644290e-57 | -8.615850e-47 |
| Msa0550720 | Msa0863440 | 0.804809 | 1.807721e-49 | -8.615850e-47 |
| Msa0560180 | Msa0863440 | 0.807572 | 4.733415e-50 | -8.615850e-47 |
| Msa0567290 | Msa0863440 | 0.845212 | 4.676566e-59 | -8.615850e-47 |
| Msa0576420 | Msa0863440 | 0.803742 | 3.014326e-49 | -8.615850e-47 |
| Msa0578900 | Msa0863440 | 0.817447 | 3.281846e-52 | -8.615850e-47 |
| Msa0581460 | Msa0863440 | 0.819421 | 1.171590e-52 | -8.615850e-47 |
| Msa0600390 | Msa0863440 | 0.802737 | 4.868272e-49 | -8.615850e-47 |
| Msa0843690 | Msa0863440 | 0.815216 | 1.035711e-51 | -8.615850e-47 |
| Msa0863440 | Msa0884730 | 0.801798 | 7.595626e-49 | -8.615850e-47 |
| Msa0863440 | Msa0925160 | 0.812674 | 3.763846e-51 | -8.615850e-47 |
| Msa0863440 | Msa0930330 | 0.802518 | 5.402139e-49 | -8.615850e-47 |
| Msa0863440 | Msa0931480 | 0.804519 | 2.078162e-49 | -8.615850e-47 |
| Msa0863440 | Msa0955260 | 0.827278 | 1.708421e-54 | -8.615850e-47 |
| Msa0863440 | Msa0972730 | 0.826174 | 3.134702e-54 | -8.615850e-47 |
| Msa0863440 | Msa0990520 | 0.831837 | 1.331019e-55 | -8.615850e-47 |
| Msa0863440 | Msa0992570 | 0.802233 | 6.183856e-49 | -8.615850e-47 |
| Msa0863440 | Msa1009790 | 0.829163 | 6.004456e-55 | -8.615850e-47 |
| Msa0863440 | Msa1027790 | 0.809869 | 1.528912e-50 | -8.615850e-47 |
| Msa0863440 | Msa1028460 | 0.830080 | 3.591426e-55 | -8.615850e-47 |
| Msa0863440 | Msa1032140 | 0.831705 | 1.434763e-55 | -8.615850e-47 |
| Msa0863440 | Msa1033120 | 0.826515 | 2.601059e-54 | -8.615850e-47 |
| Msa0863440 | Msa1045440 | 0.823272 | 1.514888e-53 | -8.615850e-47 |
| Msa0863440 | Msa1067430 | 0.843890 | 1.060656e-58 | -8.615850e-47 |
| Msa0863440 | Msa1072080 | 0.868919 | 4.562861e-66 | -8.615850e-47 |
| Msa0863440 | Msa1084490 | 0.829439 | 5.144444e-55 | -8.615850e-47 |
| Msa0863440 | Msa1097850 | 0.838901 | 2.182825e-57 | -8.615850e-47 |
| Msa0863440 | Msa1106580 | 0.804761 | 1.849592e-49 | -8.615850e-47 |
| Msa0863440 | Msa1112610 | 0.809014 | 2.333055e-50 | -8.615850e-47 |
| Msa0863440 | Msa1122160 | 0.841270 | 5.259590e-58 | -8.615850e-47 |
| Msa0863440 | Msa1125780 | 0.828449 | 8.934503e-55 | -8.615850e-47 |
| Msa0863440 | Msa1125950 | 0.828526 | 8.560917e-55 | -8.615850e-47 |
| Msa0863440 | Msa1126310 | 0.807444 | 5.040973e-50 | -8.615850e-47 |
| Msa0863440 | Msa1148780 | 0.819872 | 9.244597e-53 | -8.615850e-47 |
| Msa0863440 | Msa1159100 | 0.843013 | 1.818753e-58 | -8.615850e-47 |
| Msa0863440 | Msa1160570 | 0.849430 | 3.249253e-60 | -8.615850e-47 |
| Msa0863440 | Msa1166180 | 0.806358 | 8.550531e-50 | -8.615850e-47 |
| Msa0863440 | Msa1166280 | 0.801597 | 8.351048e-49 | -8.615850e-47 |
| Msa0863440 | Msa1167160 | 0.808924 | 2.438667e-50 | -8.615850e-47 |
| Msa0863440 | Msa1171340 | 0.836202 | 1.074185e-56 | -8.615850e-47 |
| Msa0863440 | Msa1183390 | 0.818367 | 2.033685e-52 | -8.615850e-47 |
| Msa0863440 | Msa1183610 | 0.824137 | 9.500775e-54 | -8.615850e-47 |
| Msa0863440 | Msa1183760 | 0.830884 | 2.284106e-55 | -8.615850e-47 |
| Msa0863440 | Msa1190910 | 0.810180 | 1.310264e-50 | -8.615850e-47 |
| Msa0863440 | Msa1209150 | 0.812182 | 4.821806e-51 | -8.615850e-47 |
| Msa0863440 | Msa1219250 | 0.813231 | 2.842182e-51 | -8.615850e-47 |
| Msa0863440 | Msa1229050 | 0.814807 | 1.276146e-51 | -8.615850e-47 |
| Msa0863440 | Msa1238710 | 0.800341 | 1.508587e-48 | -8.615850e-47 |
| Msa0863440 | Msa1258940 | 0.804373 | 2.228234e-49 | -8.615850e-47 |
| Msa0863440 | Msa1259470 | 0.809867 | 1.530194e-50 | -8.615850e-47 |
| Msa0863440 | Msa1271490 | 0.816335 | 5.830702e-52 | -8.615850e-47 |
| Msa0863440 | Msa1271510 | 0.824909 | 6.250676e-54 | -8.615850e-47 |
| Msa0863440 | Msa1271600 | 0.814176 | 1.760564e-51 | -8.615850e-47 |
| Msa0863440 | Msa1284070 | 0.815915 | 7.236097e-52 | -8.615850e-47 |
| Msa0863440 | Msa1284520 | 0.811793 | 5.860787e-51 | -8.615850e-47 |
| Msa0863440 | Msa1293530 | 0.845709 | 3.429601e-59 | -8.615850e-47 |
| Msa0863440 | Msa1305650 | 0.804747 | 1.861816e-49 | -8.615850e-47 |
| Msa0863440 | Msa1307370 | 0.800972 | 1.121662e-48 | -8.615850e-47 |
| Msa0863440 | Msa1309360 | 0.810209 | 1.291433e-50 | -8.615850e-47 |
| Msa0863440 | Msa1315980 | 0.809636 | 1.715972e-50 | -8.615850e-47 |
| Msa0863440 | Msa1324000 | 0.802070 | 6.677726e-49 | -8.615850e-47 |
| Msa0863440 | Msa1325980 | 0.801057 | 1.077467e-48 | -8.615850e-47 |
| Msa0863440 | Msa1339250 | 0.805247 | 1.464088e-49 | -8.615850e-47 |
| Msa0863440 | Msa1354040 | 0.807980 | 3.878250e-50 | -8.615850e-47 |
| Msa0863440 | Msa1375630 | 0.811986 | 5.321658e-51 | -8.615850e-47 |
| Msa0863440 | Msa1376530 | 0.819523 | 1.110478e-52 | -8.615850e-47 |
| Msa0863440 | Msa1376640 | 0.813077 | 3.071359e-51 | -8.615850e-47 |
| Msa0863440 | Msa1382310 | 0.831154 | 1.959960e-55 | -8.615850e-47 |
| Msa0863440 | Msa1393530 | 0.801002 | 1.105714e-48 | -8.615850e-47 |
| Msa0863440 | Msa1398480 | 0.815273 | 1.006107e-51 | -8.615850e-47 |
| Msa0863440 | Msa1398840 | 0.809601 | 1.745800e-50 | -8.615850e-47 |
| Msa0863440 | Msa1404370 | 0.807009 | 6.232087e-50 | -8.615850e-47 |
| Msa0863440 | Msa1405770 | 0.803268 | 3.780648e-49 | -8.615850e-47 |
| Msa0863440 | Msa1407710 | 0.836317 | 1.004617e-56 | -8.615850e-47 |
| Msa0863440 | Msa1410170 | 0.805994 | 1.020073e-49 | -8.615850e-47 |
| Msa0863440 | Msa1415250 | 0.834702 | 2.572065e-56 | -8.615850e-47 |
| Msa0863440 | Msa1416460 | 0.802046 | 6.755842e-49 | -8.615850e-47 |
| Msa0863440 | Msa1418600 | 0.829843 | 4.101929e-55 | -8.615850e-47 |
| Msa0863440 | Msa1419850 | 0.839854 | 1.235430e-57 | -8.615850e-47 |
| Msa0863440 | Msa1426290 | 0.810433 | 1.155751e-50 | -8.615850e-47 |
| Msa0863440 | Msa1430270 | 0.827207 | 1.777297e-54 | -8.615850e-47 |
| Msa0863440 | Msa1431960 | 0.802027 | 6.816528e-49 | -8.615850e-47 |
| Msa0863440 | Msa1437320 | 0.818284 | 2.123992e-52 | -8.615850e-47 |
| Msa0863440 | Msa1438360 | 0.802205 | 6.265955e-49 | -8.615850e-47 |
| Msa0863440 | Msa1447230 | 0.804023 | 2.635363e-49 | -8.615850e-47 |
| Msa0863440 | Msa1450030 | 0.806793 | 6.922952e-50 | -8.615850e-47 |
| Msa0863440 | Msa1458330 | 0.813562 | 2.403384e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863440 | MtrunA17_Chr5g0445051 | 99.045 | 419 | 3 | 1 | 1 | 418 | 1 | 419 | 0.0 | 832 |
| Msa0863440 | MtrunA17_Chr3g0100581 | 84.428 | 411 | 61 | 3 | 9 | 418 | 5 | 413 | 0.0 | 617 |
| Msa0863440 | MtrunA17_Chr1g0178661 | 58.446 | 296 | 121 | 1 | 72 | 365 | 135 | 430 | 4.03e-111 | 335 |
| Msa0863440 | MtrunA17_Chr7g0266231 | 58.644 | 295 | 120 | 1 | 73 | 365 | 149 | 443 | 2.42e-110 | 333 |
| Msa0863440 | MtrunA17_Chr1g0176351 | 46.617 | 133 | 63 | 4 | 16 | 145 | 53 | 180 | 4.39e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863440 | AT5G55280.1 | 85.445 | 371 | 51 | 2 | 50 | 418 | 64 | 433 | 0.0 | 577 |
| Msa0863440 | AT3G52750.3 | 60.000 | 310 | 122 | 1 | 58 | 365 | 113 | 422 | 8.04e-115 | 344 |
| Msa0863440 | AT3G52750.2 | 60.000 | 310 | 122 | 1 | 58 | 365 | 113 | 422 | 8.04e-115 | 344 |
| Msa0863440 | AT3G52750.1 | 60.000 | 310 | 122 | 1 | 58 | 365 | 113 | 422 | 8.04e-115 | 344 |
| Msa0863440 | AT2G36250.4 | 59.032 | 310 | 125 | 1 | 58 | 365 | 36 | 345 | 7.91e-113 | 337 |
| Msa0863440 | AT2G36250.2 | 59.032 | 310 | 125 | 1 | 58 | 365 | 117 | 426 | 3.77e-112 | 337 |
| Msa0863440 | AT2G36250.3 | 59.032 | 310 | 125 | 1 | 58 | 365 | 117 | 426 | 3.77e-112 | 337 |
| Msa0863440 | AT2G36250.1 | 59.032 | 310 | 125 | 1 | 58 | 365 | 117 | 426 | 3.77e-112 | 337 |
| Msa0863440 | AT3G52750.4 | 62.009 | 229 | 85 | 1 | 58 | 284 | 113 | 341 | 1.00e-81 | 255 |
Find 117 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTGCCAATATTATATT+TGG | 0.100420 | 5_4:-63190526 | Msa0863440:CDS |
| GTGAGGAAGTGAATATATTT+AGG | 0.162180 | 5_4:-63190074 | Msa0863440:three_prime_UTR |
| ACACCAAATCTGATCCTTTA+AGG | 0.168325 | 5_4:+63193842 | None:intergenic |
| GCTACTTTGGCTCCTTTAAT+TGG | 0.187864 | 5_4:-63191123 | Msa0863440:CDS |
| GCTGAAAACCCTATTAAAAT+TGG | 0.229125 | 5_4:-63194067 | Msa0863440:CDS |
| TACTGGCGGGAATCCACTTT+TGG | 0.236726 | 5_4:-63193908 | Msa0863440:CDS |
| CAACGTTTCACACGTCGTTT+TGG | 0.236894 | 5_4:-63195176 | Msa0863440:CDS |
| CAATAAAATGATAATTAAAA+AGG | 0.269212 | 5_4:+63190249 | None:intergenic |
| TGAATAGATGATCCAATTAA+AGG | 0.273013 | 5_4:+63191111 | None:intergenic |
| GCTATTGCTGATGCCCTTAA+AGG | 0.286692 | 5_4:-63193856 | Msa0863440:CDS |
| AAGATTAAGGTCGTTGGAAT+TGG | 0.290511 | 5_4:-63195116 | Msa0863440:CDS |
| TGAGGAAGTGAATATATTTA+GGG | 0.293784 | 5_4:-63190073 | Msa0863440:three_prime_UTR |
| TTGAGATGCCTTTCTTCATA+TGG | 0.307830 | 5_4:-63190183 | Msa0863440:three_prime_UTR |
| TGTTGATAACGCTAAGATTA+AGG | 0.323415 | 5_4:-63195129 | Msa0863440:CDS |
| TTCATAACAGCTGGGATGGG+TGG | 0.331608 | 5_4:-63193820 | Msa0863440:CDS |
| AGATTAAGGTCGTTGGAATT+GGG | 0.354685 | 5_4:-63195115 | Msa0863440:CDS |
| CATGATTGGTAGTGGTTTGC+AGG | 0.358021 | 5_4:-63195066 | Msa0863440:intron |
| AACAGCTCCAAATATAATAT+TGG | 0.367048 | 5_4:+63190519 | None:intergenic |
| GGGGTGGTGTATAATATTAC+TGG | 0.374863 | 5_4:-63191078 | Msa0863440:CDS |
| TTTGATATTTGAGCCACAAC+TGG | 0.375367 | 5_4:+63193775 | None:intergenic |
| GAGCTTCTGACTCGTGGATT+AGG | 0.377707 | 5_4:-63194043 | Msa0863440:intron |
| GAATGTGAGAGAAGCTTGTT+TGG | 0.378996 | 5_4:+63195260 | None:intergenic |
| TTTACAGGTTGTGACTAGTT+TGG | 0.382264 | 5_4:-63190554 | Msa0863440:intron |
| AGCAGAAGAAGCAGCAGAAC+AGG | 0.382305 | 5_4:-63191145 | Msa0863440:CDS |
| ACGTGTGAAACGTTGCGTTT+TGG | 0.386570 | 5_4:+63195184 | None:intergenic |
| TGCCCTTAAAGGATCAGATT+TGG | 0.410169 | 5_4:-63193845 | Msa0863440:CDS |
| TTACCCTGCAGGAAGTCAAC+AGG | 0.422777 | 5_4:-63191044 | Msa0863440:CDS |
| TTGAGTAGGGACTAATACTA+AGG | 0.423582 | 5_4:+63189953 | None:intergenic |
| ACTACCAATCATGCGGTTAA+CGG | 0.432044 | 5_4:+63195076 | None:intergenic |
| AGCAGCAGAACAGGCTACTT+TGG | 0.434800 | 5_4:-63191136 | Msa0863440:CDS |
| GATTTGGTGTTCATAACAGC+TGG | 0.436980 | 5_4:-63193829 | Msa0863440:CDS |
| TGACGAGCAGATGCCACTCC+AGG | 0.440624 | 5_4:-63193479 | Msa0863440:CDS |
| TCATAACAGCTGGGATGGGT+GGG | 0.443818 | 5_4:-63193819 | Msa0863440:CDS |
| CATAACAGCTGGGATGGGTG+GGG | 0.445201 | 5_4:-63193818 | Msa0863440:CDS |
| TCAAGAAGCTTAGCAGCCCT+TGG | 0.447912 | 5_4:+63190409 | None:intergenic |
| TGTGTGTTCTTTCAGATACC+TGG | 0.451298 | 5_4:-63191261 | Msa0863440:intron |
| AGCCACAACTGGGGCAGCAC+CGG | 0.454881 | 5_4:+63193786 | None:intergenic |
| CTGAAATTCCCTGAACTCCT+TGG | 0.456416 | 5_4:+63193425 | None:intergenic |
| ATGTCAAGAAGACGATCATT+TGG | 0.457004 | 5_4:+63193505 | None:intergenic |
| CTGCAAGACGAAAAGCATCC+TGG | 0.457577 | 5_4:+63193461 | None:intergenic |
| CACCAAATCTGATCCTTTAA+GGG | 0.462114 | 5_4:+63193843 | None:intergenic |
| AATGCCGTTAACCGCATGAT+TGG | 0.465096 | 5_4:-63195080 | Msa0863440:CDS |
| AGGACGTAAAAGATCCTTGC+AGG | 0.466429 | 5_4:-63193701 | Msa0863440:intron |
| GGAAGTCAACAGGGTATCTC+AGG | 0.480783 | 5_4:-63191034 | Msa0863440:intron |
| AATGCTATTAAAATTAAGTA+AGG | 0.482276 | 5_4:+63190002 | None:intergenic |
| GTTCTGCTGCTTCTTCTGCT+CGG | 0.482688 | 5_4:+63191148 | None:intergenic |
| AGATAAGTTTGAGGACTTGA+GGG | 0.484578 | 5_4:+63190345 | None:intergenic |
| GCAGCTTGTTCGCCCAAAAG+TGG | 0.485411 | 5_4:+63193895 | None:intergenic |
| AACGCTAAGATTAAGGTCGT+TGG | 0.492712 | 5_4:-63195122 | Msa0863440:CDS |
| TCATCTATTCAATCAGCCAC+TGG | 0.493122 | 5_4:-63191099 | Msa0863440:CDS |
| AACTTTGGAAGATAAGTTTG+AGG | 0.493944 | 5_4:+63190336 | None:intergenic |
| GTCCGGTGCTGCCCCAGTTG+TGG | 0.494437 | 5_4:-63193788 | Msa0863440:CDS |
| TACATAAACCATATGAAGAA+AGG | 0.497925 | 5_4:+63190175 | None:intergenic |
| GTTAACCGCATGATTGGTAG+TGG | 0.501522 | 5_4:-63195074 | Msa0863440:CDS |
| GTGTTCATAACAGCTGGGAT+GGG | 0.506181 | 5_4:-63193823 | Msa0863440:CDS |
| ATACCCTGTTGACTTCCTGC+AGG | 0.506393 | 5_4:+63191040 | None:intergenic |
| CATCTATTCAATCAGCCACT+GGG | 0.515602 | 5_4:-63191098 | Msa0863440:CDS |
| GCTTCTTGACAAAGTGGCCG+AGG | 0.517881 | 5_4:-63190395 | Msa0863440:CDS |
| TTGATATTTGAGCCACAACT+GGG | 0.519459 | 5_4:+63193776 | None:intergenic |
| AGACTTCTATGCAATTAATA+CGG | 0.522331 | 5_4:-63194116 | Msa0863440:CDS |
| GTTTGAGGACTTGAGGGGAG+TGG | 0.523000 | 5_4:+63190351 | None:intergenic |
| AAGATAAGTTTGAGGACTTG+AGG | 0.523933 | 5_4:+63190344 | None:intergenic |
| TTTGAGGACTTGAGGGGAGT+GGG | 0.525168 | 5_4:+63190352 | None:intergenic |
| ATAACAGCTGGGATGGGTGG+GGG | 0.529972 | 5_4:-63193817 | Msa0863440:CDS |
| GACTCTGGTACTGCAATGCT+CGG | 0.530970 | 5_4:-63191195 | Msa0863440:CDS |
| AAATCCACATTCACAAGTCC+AGG | 0.531100 | 5_4:+63191243 | None:intergenic |
| GATTAAGGTCGTTGGAATTG+GGG | 0.533391 | 5_4:-63195114 | Msa0863440:CDS |
| TTACGTCCTTCAAAACTGAA+AGG | 0.535553 | 5_4:+63193715 | None:intergenic |
| CTCGGAGTAGGTGTTTCCTC+TGG | 0.540323 | 5_4:-63191177 | Msa0863440:CDS |
| ATTGGAGAGCTTCTGACTCG+TGG | 0.542831 | 5_4:-63194049 | Msa0863440:CDS |
| ATTAAGGTCGTTGGAATTGG+GGG | 0.543385 | 5_4:-63195113 | Msa0863440:CDS |
| CACGTGACTATCATCGCCAC+TGG | 0.547688 | 5_4:-63190469 | Msa0863440:CDS |
| GGTGTTCATAACAGCTGGGA+TGG | 0.553850 | 5_4:-63193824 | Msa0863440:CDS |
| AGTAGGAACACCTGCCTGCA+AGG | 0.555045 | 5_4:+63193687 | None:intergenic |
| CGGTGCTCTAGATTCAACTT+TGG | 0.558458 | 5_4:+63190321 | None:intergenic |
| AAGTGGATAGTGATGAATTG+TGG | 0.559720 | 5_4:+63195228 | None:intergenic |
| GGTACTGCAATGCTCGGAGT+AGG | 0.561514 | 5_4:-63191189 | Msa0863440:CDS |
| AGGAAAGGACATTACCCTGC+AGG | 0.569822 | 5_4:-63191055 | Msa0863440:CDS |
| AGAAGCTGCTAACAGATCCA+AGG | 0.573525 | 5_4:-63190426 | Msa0863440:CDS |
| GTTGTTGATGATCGTTACAC+CGG | 0.583436 | 5_4:-63190499 | Msa0863440:CDS |
| ACAAGCTGCGGAGGAATCAA+AGG | 0.584191 | 5_4:-63193881 | Msa0863440:CDS |
| ATAGTGATGCAGGTACTGGC+GGG | 0.584393 | 5_4:-63193921 | Msa0863440:intron |
| GTATAATATTACTGGAGGAA+AGG | 0.584416 | 5_4:-63191070 | Msa0863440:CDS |
| TGTGGCTCAAATATCAAAAG+AGG | 0.584777 | 5_4:-63193770 | Msa0863440:CDS |
| TAGTGATGAATTGTGGAAGA+GGG | 0.592094 | 5_4:+63195235 | None:intergenic |
| AAGTGAAACTGAATGTGAAG+TGG | 0.592737 | 5_4:+63195211 | None:intergenic |
| GATAAGTTTGAGGACTTGAG+GGG | 0.595834 | 5_4:+63190346 | None:intergenic |
| ATAGTGATGAATTGTGGAAG+AGG | 0.597745 | 5_4:+63195234 | None:intergenic |
| TTGTTGATGATCGTTACACC+GGG | 0.600097 | 5_4:-63190498 | Msa0863440:CDS |
| GATACCTGGACTTGTGAATG+TGG | 0.601582 | 5_4:-63191247 | Msa0863440:CDS |
| GCTCAAATATCAAAAGAGGC+AGG | 0.602252 | 5_4:-63193766 | Msa0863440:CDS |
| CTTCTTGACAAAGTGGCCGA+GGG | 0.602545 | 5_4:-63190394 | Msa0863440:CDS |
| GATAGTGATGCAGGTACTGG+CGG | 0.603838 | 5_4:-63193922 | Msa0863440:intron |
| CCAAATATAATATTGGCAGA+AGG | 0.604139 | 5_4:+63190526 | None:intergenic |
| TGCTAAGCTTCTTGACAAAG+TGG | 0.604517 | 5_4:-63190401 | Msa0863440:CDS |
| GATAGTCACGTGAATCTCCC+CGG | 0.604903 | 5_4:+63190480 | None:intergenic |
| ATTTGGTGTTCATAACAGCT+GGG | 0.611725 | 5_4:-63193828 | Msa0863440:CDS |
| AAGTAAGGACTAAACTTACA+AGG | 0.615053 | 5_4:+63190017 | None:intergenic |
| TTTGGGCGAACAAGCTGCGG+AGG | 0.616087 | 5_4:-63193890 | Msa0863440:CDS |
| AAAGCTGTGATGAAAGACTC+TGG | 0.621028 | 5_4:-63191210 | Msa0863440:CDS |
| TGAGTAGGGACTAATACTAA+GGG | 0.621350 | 5_4:+63189954 | None:intergenic |
| TACCCTGTTGACTTCCTGCA+GGG | 0.624886 | 5_4:+63191041 | None:intergenic |
| AGACGAAAAGCATCCTGGAG+TGG | 0.632007 | 5_4:+63193466 | None:intergenic |
| TATTCAATCAGCCACTGGGG+TGG | 0.646947 | 5_4:-63191094 | Msa0863440:CDS |
| TACCCTGCAGGAAGTCAACA+GGG | 0.647460 | 5_4:-63191043 | Msa0863440:CDS |
| GAGGCAGGTTACTTGACCGT+GGG | 0.648556 | 5_4:-63193751 | Msa0863440:CDS |
| GTGGTGTATAATATTACTGG+AGG | 0.650305 | 5_4:-63191075 | Msa0863440:CDS |
| GAAGCTGCTAACAGATCCAA+GGG | 0.650445 | 5_4:-63190425 | Msa0863440:CDS |
| AGAGGCAGGTTACTTGACCG+TGG | 0.660274 | 5_4:-63193752 | Msa0863440:CDS |
| AAAAGACTGCGAAAAGCCAG+TGG | 0.669333 | 5_4:+63190453 | None:intergenic |
| AGGATATGTAACAACGCCCA+CGG | 0.675492 | 5_4:+63193735 | None:intergenic |
| GCTACATACACTTAAGCACA+TGG | 0.683056 | 5_4:+63190151 | None:intergenic |
| GCAAACCACTACCAATCATG+CGG | 0.687686 | 5_4:+63195069 | None:intergenic |
| ATCTATTCAATCAGCCACTG+GGG | 0.689596 | 5_4:-63191097 | Msa0863440:CDS |
| TGATATTTGAGCCACAACTG+GGG | 0.715087 | 5_4:+63193777 | None:intergenic |
| AATATTATACACCACCCCAG+TGG | 0.754567 | 5_4:+63191083 | None:intergenic |
| TGTTGATGATCGTTACACCG+GGG | 0.787369 | 5_4:-63190497 | Msa0863440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATATATATTTTAT+CGG | + | chr5_4:63193815-63193834 | None:intergenic | 0.0% |
| !!! | CAAATTAAATATTATGATTT+TGG | + | chr5_4:63193649-63193668 | None:intergenic | 10.0% |
| !!! | ATGTATATATTATTTTAATG+AGG | - | chr5_4:63194008-63194027 | Msa0863440:intron | 10.0% |
| !! | CAATAAAATGATAATTAAAA+AGG | + | chr5_4:63195111-63195130 | None:intergenic | 10.0% |
| !!! | ATTTTTGTTATCTTGAAAAT+GGG | + | chr5_4:63190043-63190062 | None:intergenic | 15.0% |
| !! | AATACTATTGTTCAATAAAA+TGG | - | chr5_4:63191752-63191771 | Msa0863440:intron | 15.0% |
| !! | TACTCATAATCTAATAAAAT+TGG | - | chr5_4:63192242-63192261 | Msa0863440:intron | 15.0% |
| !!! | ATTCTAAATTAAAAAAGTAC+AGG | + | chr5_4:63192685-63192704 | None:intergenic | 15.0% |
| !! | GTTAAGATTAAGAATTTAAA+TGG | - | chr5_4:63192750-63192769 | Msa0863440:intron | 15.0% |
| !!! | TTATTGGTTAAAATTCATAT+CGG | - | chr5_4:63193200-63193219 | Msa0863440:intron | 15.0% |
| !!! | ATTAAATATTATGATTTTGG+TGG | + | chr5_4:63193646-63193665 | None:intergenic | 15.0% |
| !!! | TTTATACACTTCATTTTTTT+TGG | - | chr5_4:63193727-63193746 | Msa0863440:CDS | 15.0% |
| !!! | GATTTAGAATTAATGATTTT+AGG | - | chr5_4:63194469-63194488 | Msa0863440:intron | 15.0% |
| !!! | AACAATTTTTGTTTATGAAA+TGG | - | chr5_4:63195234-63195253 | Msa0863440:CDS | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr5_4:63195358-63195377 | None:intergenic | 15.0% |
| !!! | CATTTTTGTTATCTTGAAAA+TGG | + | chr5_4:63190044-63190063 | None:intergenic | 20.0% |
| !!! | CATTTTCAAGATAACAAAAA+TGG | - | chr5_4:63190042-63190061 | Msa0863440:three_prime_UTR | 20.0% |
| !! | CTTTATGGAAGAAAAATAAA+GGG | + | chr5_4:63190330-63190349 | None:intergenic | 20.0% |
| !! | ACTTTATGGAAGAAAAATAA+AGG | + | chr5_4:63190331-63190350 | None:intergenic | 20.0% |
| !! | AGGTAAAAATGAAAACTTTA+TGG | + | chr5_4:63190345-63190364 | None:intergenic | 20.0% |
| !! | CATTAACAATGCTATAAATT+GGG | + | chr5_4:63190389-63190408 | None:intergenic | 20.0% |
| !! | CAATTTATAGCATTGTTAAT+GGG | - | chr5_4:63190388-63190407 | Msa0863440:CDS | 20.0% |
| !!! | CATAGTTTTATTCAGAAATT+TGG | - | chr5_4:63190531-63190550 | Msa0863440:CDS | 20.0% |
| !! | AAAACTTCTACAATATATCA+CGG | + | chr5_4:63191108-63191127 | None:intergenic | 20.0% |
| !! | ATCAATTTCTCAATAAAACT+AGG | + | chr5_4:63191385-63191404 | None:intergenic | 20.0% |
| !! | TTTATTGAGAAATTGATTGA+TGG | - | chr5_4:63191388-63191407 | Msa0863440:intron | 20.0% |
| !!! | ATTCATTTGATATTTTGTTC+AGG | - | chr5_4:63191776-63191795 | Msa0863440:intron | 20.0% |
| !!! | TATTCTATTCTTCTTTTTCA+TGG | - | chr5_4:63191988-63192007 | Msa0863440:intron | 20.0% |
| !!! | ATAGCAATTTAAAGTCAATT+CGG | - | chr5_4:63192214-63192233 | Msa0863440:intron | 20.0% |
| !!! | AGTCTTATATTACTATTGTT+AGG | - | chr5_4:63192631-63192650 | Msa0863440:intron | 20.0% |
| !!! | TTTAGAATGACACTTTATTA+TGG | - | chr5_4:63192697-63192716 | Msa0863440:intron | 20.0% |
| !!! | ACGCGAAATTTTTAAAATTT+AGG | - | chr5_4:63193337-63193356 | Msa0863440:intron | 20.0% |
| !!! | TTAAAATTTAGGATACGATA+CGG | - | chr5_4:63193348-63193367 | Msa0863440:intron | 20.0% |
| !!! | TCTATTTTCATTCATATGTT+AGG | - | chr5_4:63193533-63193552 | Msa0863440:CDS | 20.0% |
| !!! | TTTAAGCTTATTTTTAAGTG+AGG | - | chr5_4:63195266-63195285 | Msa0863440:CDS | 20.0% |
| !!! | CTTTTTTGGCTTTTTTGTTA+GGG | + | chr5_4:63190016-63190035 | None:intergenic | 25.0% |
| !!! | TCTTTTTTGGCTTTTTTGTT+AGG | + | chr5_4:63190017-63190036 | None:intergenic | 25.0% |
| !!! | TGAAAATGGGTTTTCTTTTT+TGG | + | chr5_4:63190030-63190049 | None:intergenic | 25.0% |
| ! | CCATTAACAATGCTATAAAT+TGG | + | chr5_4:63190390-63190409 | None:intergenic | 25.0% |
| ! | CCAATTTATAGCATTGTTAA+TGG | - | chr5_4:63190387-63190406 | Msa0863440:CDS | 25.0% |
| ! | ATAAACTATGTAGCTGTAAA+TGG | - | chr5_4:63190432-63190451 | Msa0863440:CDS | 25.0% |
| ! | TAAACTATGTAGCTGTAAAT+GGG | - | chr5_4:63190433-63190452 | Msa0863440:CDS | 25.0% |
| !! | TTTTATTCAGAAATTTGGAC+TGG | - | chr5_4:63190536-63190555 | Msa0863440:CDS | 25.0% |
| !!! | TTATTTTATTCTCGTGTTGT+TGG | + | chr5_4:63190603-63190622 | None:intergenic | 25.0% |
| ! | ATCACCTATAGTAAAAAAGA+TGG | - | chr5_4:63190716-63190735 | Msa0863440:intron | 25.0% |
| ! | ATCCTTACTACAAAATCTAT+AGG | + | chr5_4:63190783-63190802 | None:intergenic | 25.0% |
| !! | AGATTTAGAGTTTAATGAGT+TGG | - | chr5_4:63190881-63190900 | Msa0863440:intron | 25.0% |
| ! | TGGTTTATGGTAGAATATTA+TGG | - | chr5_4:63190913-63190932 | Msa0863440:intron | 25.0% |
| !!! | AATACTAATGTTGGTTTCTT+CGG | - | chr5_4:63191196-63191215 | Msa0863440:CDS | 25.0% |
| ! | AGACTTCTATGCAATTAATA+CGG | - | chr5_4:63191241-63191260 | Msa0863440:CDS | 25.0% |
| ! | ATTTCTCAATAAAACTAGGA+AGG | + | chr5_4:63191381-63191400 | None:intergenic | 25.0% |
| ! | ATCAAGCAATTTGAATCAAA+AGG | + | chr5_4:63191418-63191437 | None:intergenic | 25.0% |
| !!! | ATTTCTTTGAAGCTTTTCAA+TGG | + | chr5_4:63191811-63191830 | None:intergenic | 25.0% |
| !!! | AGAATCTTTTCAAGTCTAAT+GGG | + | chr5_4:63192046-63192065 | None:intergenic | 25.0% |
| !!! | AAGAATCTTTTCAAGTCTAA+TGG | + | chr5_4:63192047-63192066 | None:intergenic | 25.0% |
| ! | TAAATTGCTATGTAAACTCA+AGG | + | chr5_4:63192205-63192224 | None:intergenic | 25.0% |
| ! | ATATTACTATTGTTAGGTGT+TGG | - | chr5_4:63192637-63192656 | Msa0863440:intron | 25.0% |
| ! | TATTACTATTGTTAGGTGTT+GGG | - | chr5_4:63192638-63192657 | Msa0863440:intron | 25.0% |
| ! | GTTGATGTATAATGCATTTA+CGG | - | chr5_4:63192772-63192791 | Msa0863440:intron | 25.0% |
| !!! | AAGTTTTTAAGTAGATCAGT+AGG | - | chr5_4:63192853-63192872 | Msa0863440:intron | 25.0% |
| ! | GATACTTAAAAGATACTCAA+CGG | + | chr5_4:63193793-63193812 | None:intergenic | 25.0% |
| ! | TAATTAATTCCGATACTTCT+AGG | - | chr5_4:63193840-63193859 | Msa0863440:CDS | 25.0% |
| ! | TTAACCAATAGAAAAAAGTG+TGG | - | chr5_4:63193956-63193975 | Msa0863440:intron | 25.0% |
| ! | TGAATAGATGATCCAATTAA+AGG | + | chr5_4:63194249-63194268 | None:intergenic | 25.0% |
| !!! | CGTAATTTTGATTAGATAGA+AGG | + | chr5_4:63194560-63194579 | None:intergenic | 25.0% |
| ! | TTTCTCTTCAAGAAAGTTAT+TGG | + | chr5_4:63194590-63194609 | None:intergenic | 25.0% |
| ! | ATAACTTTCTTGAAGAGAAA+AGG | - | chr5_4:63194590-63194609 | Msa0863440:intron | 25.0% |
| ! | TAACTTTCTTGAAGAGAAAA+GGG | - | chr5_4:63194591-63194610 | Msa0863440:intron | 25.0% |
| ! | GGAAAAAAATAGATCCTTTA+GGG | + | chr5_4:63194632-63194651 | None:intergenic | 25.0% |
| ! | AGGAAAAAAATAGATCCTTT+AGG | + | chr5_4:63194633-63194652 | None:intergenic | 25.0% |
| ! | GACATGTATAATAAAGAGAA+AGG | + | chr5_4:63194762-63194781 | None:intergenic | 25.0% |
| ! | AACAGCTCCAAATATAATAT+TGG | + | chr5_4:63194841-63194860 | None:intergenic | 25.0% |
| ! | TACATAAACCATATGAAGAA+AGG | + | chr5_4:63195185-63195204 | None:intergenic | 25.0% |
| ! | TGAGGAAGTGAATATATTTA+GGG | - | chr5_4:63195284-63195303 | Msa0863440:CDS | 25.0% |
| ! | AGGGCAAAAAAACAAAATTA+GGG | + | chr5_4:63195387-63195406 | None:intergenic | 25.0% |
| ! | AAGGGCAAAAAAACAAAATT+AGG | + | chr5_4:63195388-63195407 | None:intergenic | 25.0% |
| !! | TGTTGATAACGCTAAGATTA+AGG | - | chr5_4:63190228-63190247 | Msa0863440:three_prime_UTR | 30.0% |
| ! | TCTAAAATAAGTGAAGGGAA+AGG | + | chr5_4:63190365-63190384 | None:intergenic | 30.0% |
| !! | TGGGTTCTAAAATAAGTGAA+GGG | + | chr5_4:63190370-63190389 | None:intergenic | 30.0% |
| !! | TTGGGTTCTAAAATAAGTGA+AGG | + | chr5_4:63190371-63190390 | None:intergenic | 30.0% |
| ACCTATAGTAAAAAAGATGG+TGG | - | chr5_4:63190719-63190738 | Msa0863440:intron | 30.0% | |
| !!! | TCCACCATCTTTTTTACTAT+AGG | + | chr5_4:63190723-63190742 | None:intergenic | 30.0% |
| TTGTAGTAAGGATAGTAGAT+CGG | - | chr5_4:63190790-63190809 | Msa0863440:intron | 30.0% | |
| AATAGTAGCACTAGAATGAA+AGG | + | chr5_4:63191008-63191027 | None:intergenic | 30.0% | |
| AACATTAGTATTCACAAGCA+AGG | + | chr5_4:63191188-63191207 | None:intergenic | 30.0% | |
| TTGCTTGTGAATACTAATGT+TGG | - | chr5_4:63191187-63191206 | Msa0863440:CDS | 30.0% | |
| TTCGGCTTATATTTGTAATC+AGG | - | chr5_4:63191214-63191233 | Msa0863440:CDS | 30.0% | |
| TCGGCTTATATTTGTAATCA+GGG | - | chr5_4:63191215-63191234 | Msa0863440:CDS | 30.0% | |
| GCTGAAAACCCTATTAAAAT+TGG | - | chr5_4:63191290-63191309 | Msa0863440:intron | 30.0% | |
| !! | GAAGCTCTCCAATTTTAATA+GGG | + | chr5_4:63191301-63191320 | None:intergenic | 30.0% |
| !! | AGAAGCTCTCCAATTTTAAT+AGG | + | chr5_4:63191302-63191321 | None:intergenic | 30.0% |
| AATAAAACTAGGAAGGCTAT+AGG | + | chr5_4:63191374-63191393 | None:intergenic | 30.0% | |
| ! | TTGAGAAATTGATTGATGGT+TGG | - | chr5_4:63191392-63191411 | Msa0863440:intron | 30.0% |
| !! | ACATATCCTTTCAGTTTTGA+AGG | - | chr5_4:63191636-63191655 | Msa0863440:intron | 30.0% |
| GAAAATAACTCAGTAATGAC+AGG | + | chr5_4:63191721-63191740 | None:intergenic | 30.0% | |
| ATTTAGACAAAAGGACTACA+CGG | + | chr5_4:63192120-63192139 | None:intergenic | 30.0% | |
| ! | AAATTTGGTAACTAATAGGG+AGG | + | chr5_4:63192401-63192420 | None:intergenic | 30.0% |
| ! | CGGAAATTTGGTAACTAATA+GGG | + | chr5_4:63192404-63192423 | None:intergenic | 30.0% |
| ! | TCGGAAATTTGGTAACTAAT+AGG | + | chr5_4:63192405-63192424 | None:intergenic | 30.0% |
| AATGTTAAATTGTCCCACAT+CGG | + | chr5_4:63192424-63192443 | None:intergenic | 30.0% | |
| AATGAACTTACACAACTAGA+GGG | - | chr5_4:63192465-63192484 | Msa0863440:intron | 30.0% | |
| CTAATGTTAAATTTCCACAG+AGG | + | chr5_4:63192516-63192535 | None:intergenic | 30.0% | |
| ATGTCATGTAGAATAATGCT+AGG | - | chr5_4:63192811-63192830 | Msa0863440:intron | 30.0% | |
| TCTACTTAAAAACTTGAACC+TGG | + | chr5_4:63192848-63192867 | None:intergenic | 30.0% | |
| !!! | ACTTTCTCTGTTTTTTTGCT+TGG | + | chr5_4:63192989-63193008 | None:intergenic | 30.0% |
| GAAAAAAACAGAGAAAACAG+AGG | - | chr5_4:63193012-63193031 | Msa0863440:intron | 30.0% | |
| ! | AACCAATAAAAGAGTGTGTT+GGG | + | chr5_4:63193189-63193208 | None:intergenic | 30.0% |
| ! | TAACCAATAAAAGAGTGTGT+TGG | + | chr5_4:63193190-63193209 | None:intergenic | 30.0% |
| GAGTTCCACTAAATTTATGT+GGG | + | chr5_4:63193246-63193265 | None:intergenic | 30.0% | |
| TGAGTTCCACTAAATTTATG+TGG | + | chr5_4:63193247-63193266 | None:intergenic | 30.0% | |
| TAAGTTAACTCGTTTAGCAT+AGG | + | chr5_4:63194051-63194070 | None:intergenic | 30.0% | |
| GTATAATATTACTGGAGGAA+AGG | - | chr5_4:63194287-63194306 | Msa0863440:intron | 30.0% | |
| ! | AAAAATAGATCCTTTAGGGA+TGG | + | chr5_4:63194628-63194647 | None:intergenic | 30.0% |
| ATAGTCTTTCAAGAGCAAAA+TGG | + | chr5_4:63194700-63194719 | None:intergenic | 30.0% | |
| CTATATCCAGTTATCATCAT+TGG | - | chr5_4:63194716-63194735 | Msa0863440:intron | 30.0% | |
| ! | TCAATGCGTGTAATTTTTAC+AGG | - | chr5_4:63194788-63194807 | Msa0863440:intron | 30.0% |
| CCAAATATAATATTGGCAGA+AGG | + | chr5_4:63194834-63194853 | None:intergenic | 30.0% | |
| CCTTCTGCCAATATTATATT+TGG | - | chr5_4:63194831-63194850 | Msa0863440:intron | 30.0% | |
| ! | AACTTTGGAAGATAAGTTTG+AGG | + | chr5_4:63195024-63195043 | None:intergenic | 30.0% |
| ACTAAAAAAAGAGCTTTCGT+GGG | + | chr5_4:63195064-63195083 | None:intergenic | 30.0% | |
| AACTAAAAAAAGAGCTTTCG+TGG | + | chr5_4:63195065-63195084 | None:intergenic | 30.0% | |
| GTGAGGAAGTGAATATATTT+AGG | - | chr5_4:63195283-63195302 | Msa0863440:CDS | 30.0% | |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr5_4:63195327-63195346 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr5_4:63195328-63195347 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | + | chr5_4:63195343-63195362 | None:intergenic | 30.0% | |
| !!! | TTTGGTTTTGTGAGAGAAGA+AGG | + | chr5_4:63190082-63190101 | None:intergenic | 35.0% |
| TAGTGATGAATTGTGGAAGA+GGG | + | chr5_4:63190125-63190144 | None:intergenic | 35.0% | |
| ATAGTGATGAATTGTGGAAG+AGG | + | chr5_4:63190126-63190145 | None:intergenic | 35.0% | |
| AAGTGGATAGTGATGAATTG+TGG | + | chr5_4:63190132-63190151 | None:intergenic | 35.0% | |
| AAGTGAAACTGAATGTGAAG+TGG | + | chr5_4:63190149-63190168 | None:intergenic | 35.0% | |
| AAGATTAAGGTCGTTGGAAT+TGG | - | chr5_4:63190241-63190260 | Msa0863440:three_prime_UTR | 35.0% | |
| AGATTAAGGTCGTTGGAATT+GGG | - | chr5_4:63190242-63190261 | Msa0863440:three_prime_UTR | 35.0% | |
| AGCTGTAAATGGGATAACTT+TGG | - | chr5_4:63190443-63190462 | Msa0863440:CDS | 35.0% | |
| ! | TGTTGACTGTTTCATTCTAG+TGG | - | chr5_4:63190496-63190515 | Msa0863440:CDS | 35.0% |
| !! | GTAAAAAAGATGGTGGAAAC+TGG | - | chr5_4:63190726-63190745 | Msa0863440:intron | 35.0% |
| ! | GGCCTATAGATTTTGTAGTA+AGG | - | chr5_4:63190778-63190797 | Msa0863440:intron | 35.0% |
| ! | TAATGAGTTGGATCGAAATC+TGG | - | chr5_4:63190893-63190912 | Msa0863440:intron | 35.0% |
| ! | TTGGATCGAAATCTGGTTTA+TGG | - | chr5_4:63190900-63190919 | Msa0863440:intron | 35.0% |
| !!! | CAATTTTAACTTCGTTCGCA+TGG | + | chr5_4:63191078-63191097 | None:intergenic | 35.0% |
| AGTGAAAACATTTGCAAGCA+AGG | + | chr5_4:63191351-63191370 | None:intergenic | 35.0% | |
| !! | AAATTGCTTGATAGTGATGC+AGG | - | chr5_4:63191426-63191445 | Msa0863440:intron | 35.0% |
| CACCAAATCTGATCCTTTAA+GGG | + | chr5_4:63191517-63191536 | None:intergenic | 35.0% | |
| ACACCAAATCTGATCCTTTA+AGG | + | chr5_4:63191518-63191537 | None:intergenic | 35.0% | |
| !! | ATTTGGTGTTCATAACAGCT+GGG | - | chr5_4:63191529-63191548 | Msa0863440:intron | 35.0% |
| TTGATATTTGAGCCACAACT+GGG | + | chr5_4:63191584-63191603 | None:intergenic | 35.0% | |
| TTTGATATTTGAGCCACAAC+TGG | + | chr5_4:63191585-63191604 | None:intergenic | 35.0% | |
| TGTGGCTCAAATATCAAAAG+AGG | - | chr5_4:63191587-63191606 | Msa0863440:intron | 35.0% | |
| TTACGTCCTTCAAAACTGAA+AGG | + | chr5_4:63191645-63191664 | None:intergenic | 35.0% | |
| AATTCTCAAACAACGAGAGT+AGG | + | chr5_4:63191690-63191709 | None:intergenic | 35.0% | |
| ATGTCAAGAAGACGATCATT+TGG | + | chr5_4:63191855-63191874 | None:intergenic | 35.0% | |
| TCAAGTCCAATTATGAAGAG+TGG | + | chr5_4:63192078-63192097 | None:intergenic | 35.0% | |
| TTGGACTTGAACTTATGTCA+AGG | - | chr5_4:63192088-63192107 | Msa0863440:intron | 35.0% | |
| TGGACTTGAACTTATGTCAA+GGG | - | chr5_4:63192089-63192108 | Msa0863440:intron | 35.0% | |
| GGTCACATGATTTAGACAAA+AGG | + | chr5_4:63192129-63192148 | None:intergenic | 35.0% | |
| TCATAGGTTATGGGAAACAA+AGG | - | chr5_4:63192301-63192320 | Msa0863440:intron | 35.0% | |
| ! | ATAGTGCACTAATTTTTCCC+TGG | - | chr5_4:63192337-63192356 | Msa0863440:intron | 35.0% |
| TAGTTACCAAATTTCCGATG+TGG | - | chr5_4:63192407-63192426 | Msa0863440:intron | 35.0% | |
| AGTTACCAAATTTCCGATGT+GGG | - | chr5_4:63192408-63192427 | Msa0863440:intron | 35.0% | |
| CAATGAACTTACACAACTAG+AGG | - | chr5_4:63192464-63192483 | Msa0863440:intron | 35.0% | |
| AGTGCAATAGCTTAAACTAG+AGG | - | chr5_4:63192534-63192553 | Msa0863440:intron | 35.0% | |
| GTGCAATAGCTTAAACTAGA+GGG | - | chr5_4:63192535-63192554 | Msa0863440:intron | 35.0% | |
| !! | TTTTAAGTAGATCAGTAGGC+TGG | - | chr5_4:63192857-63192876 | Msa0863440:intron | 35.0% |
| TTGTAACACGATTCGTAAGT+AGG | - | chr5_4:63192902-63192921 | Msa0863440:intron | 35.0% | |
| ACAGAGCAATTAGTGAAAAC+AGG | - | chr5_4:63192959-63192978 | Msa0863440:intron | 35.0% | |
| CAGAGCAATTAGTGAAAACA+GGG | - | chr5_4:63192960-63192979 | Msa0863440:intron | 35.0% | |
| AGAGCAATTAGTGAAAACAG+GGG | - | chr5_4:63192961-63192980 | Msa0863440:intron | 35.0% | |
| ! | ATCCCAACACACTCTTTTAT+TGG | - | chr5_4:63193184-63193203 | Msa0863440:intron | 35.0% |
| !! | GAATTTTAACCTATGAAGCC+CGG | - | chr5_4:63193270-63193289 | Msa0863440:intron | 35.0% |
| !! | ATTCCGATACTTCTAGGATA+CGG | - | chr5_4:63193846-63193865 | Msa0863440:CDS | 35.0% |
| ! | ATACCGTATCCTAGAAGTAT+CGG | + | chr5_4:63193852-63193871 | None:intergenic | 35.0% |
| TGGTTAAAATCTATGAAGCC+CGG | + | chr5_4:63193943-63193962 | None:intergenic | 35.0% | |
| ! | ACCAATAGAAAAAAGTGTGG+TGG | - | chr5_4:63193959-63193978 | Msa0863440:intron | 35.0% |
| !!! | ACCACCACACTTTTTTCTAT+TGG | + | chr5_4:63193963-63193982 | None:intergenic | 35.0% |
| GTGGTGTATAATATTACTGG+AGG | - | chr5_4:63194282-63194301 | Msa0863440:intron | 35.0% | |
| TCGCAGAATCAAAGTGTAAA+AGG | + | chr5_4:63194395-63194414 | None:intergenic | 35.0% | |
| CTCTTCAAGAAAGTTATTGG+AGG | + | chr5_4:63194587-63194606 | None:intergenic | 35.0% | |
| TACATCTATACCATCCCTAA+AGG | - | chr5_4:63194615-63194634 | Msa0863440:intron | 35.0% | |
| ACAAAGCCAATGATGATAAC+TGG | + | chr5_4:63194725-63194744 | None:intergenic | 35.0% | |
| ! | TTTACAGGTTGTGACTAGTT+TGG | - | chr5_4:63194803-63194822 | Msa0863440:intron | 35.0% |
| AGATAAGTTTGAGGACTTGA+GGG | + | chr5_4:63195015-63195034 | None:intergenic | 35.0% | |
| AAGATAAGTTTGAGGACTTG+AGG | + | chr5_4:63195016-63195035 | None:intergenic | 35.0% | |
| TAAAAAAAGAGCTTTCGTGG+GGG | + | chr5_4:63195062-63195081 | None:intergenic | 35.0% | |
| CTAAAAAAAGAGCTTTCGTG+GGG | + | chr5_4:63195063-63195082 | None:intergenic | 35.0% | |
| TTGAGATGCCTTTCTTCATA+TGG | - | chr5_4:63195174-63195193 | Msa0863440:CDS | 35.0% | |
| ! | GAATGTGAGAGAAGCTTGTT+TGG | + | chr5_4:63190100-63190119 | None:intergenic | 40.0% |
| !! | AACGTTTCACACGTCGTTTT+GGG | - | chr5_4:63190182-63190201 | Msa0863440:three_prime_UTR | 40.0% |
| AACGCTAAGATTAAGGTCGT+TGG | - | chr5_4:63190235-63190254 | Msa0863440:three_prime_UTR | 40.0% | |
| GATTAAGGTCGTTGGAATTG+GGG | - | chr5_4:63190243-63190262 | Msa0863440:three_prime_UTR | 40.0% | |
| ATTAAGGTCGTTGGAATTGG+GGG | - | chr5_4:63190244-63190263 | Msa0863440:three_prime_UTR | 40.0% | |
| ACTACCAATCATGCGGTTAA+CGG | + | chr5_4:63190284-63190303 | None:intergenic | 40.0% | |
| !! | TTTGGACTGGCTATGTTGTA+TGG | - | chr5_4:63190549-63190568 | Msa0863440:CDS | 40.0% |
| ! | ATAAGTGCTGTGAGACTAGA+TGG | - | chr5_4:63190652-63190671 | Msa0863440:intron | 40.0% |
| ! | TAAGTGCTGTGAGACTAGAT+GGG | - | chr5_4:63190653-63190672 | Msa0863440:intron | 40.0% |
| CTACATGTTCAAACCACCTA+AGG | + | chr5_4:63190752-63190771 | None:intergenic | 40.0% | |
| GGTTTGAACATGTAGAGAGA+AGG | - | chr5_4:63190757-63190776 | Msa0863440:intron | 40.0% | |
| AGTAAGGATAGTAGATCGGA+TGG | - | chr5_4:63190794-63190813 | Msa0863440:intron | 40.0% | |
| ATGGAGGATAGTCAATTCAC+TGG | - | chr5_4:63190813-63190832 | Msa0863440:intron | 40.0% | |
| ! | AGCCTTATCCTACACTAAGT+GGG | + | chr5_4:63190963-63190982 | None:intergenic | 40.0% |
| ! | AAGCCTTATCCTACACTAAG+TGG | + | chr5_4:63190964-63190983 | None:intergenic | 40.0% |
| TGCCCTTAAAGGATCAGATT+TGG | - | chr5_4:63191512-63191531 | Msa0863440:intron | 40.0% | |
| !! | GATTTGGTGTTCATAACAGC+TGG | - | chr5_4:63191528-63191547 | Msa0863440:intron | 40.0% |
| TGATATTTGAGCCACAACTG+GGG | + | chr5_4:63191583-63191602 | None:intergenic | 40.0% | |
| GCTCAAATATCAAAAGAGGC+AGG | - | chr5_4:63191591-63191610 | Msa0863440:intron | 40.0% | |
| GCATGATTTAAGTCCCTAGT+TGG | - | chr5_4:63192019-63192038 | Msa0863440:intron | 40.0% | |
| AAGTCTAATGGGACCAACTA+GGG | + | chr5_4:63192035-63192054 | None:intergenic | 40.0% | |
| GAGTTGCCACTCTTCATAAT+TGG | - | chr5_4:63192069-63192088 | Msa0863440:intron | 40.0% | |
| TTAACAACCTTGCACACAAC+AGG | + | chr5_4:63192150-63192169 | None:intergenic | 40.0% | |
| CTAGAATCGTACGTGTTCAT+AGG | - | chr5_4:63192285-63192304 | Msa0863440:intron | 40.0% | |
| TCGTACGTGTTCATAGGTTA+TGG | - | chr5_4:63192291-63192310 | Msa0863440:intron | 40.0% | |
| CGTACGTGTTCATAGGTTAT+GGG | - | chr5_4:63192292-63192311 | Msa0863440:intron | 40.0% | |
| GAGGAGGACTCTGTATAAAA+CGG | + | chr5_4:63192382-63192401 | None:intergenic | 40.0% | |
| ! | TTTGGTAACTAATAGGGAGG+AGG | + | chr5_4:63192398-63192417 | None:intergenic | 40.0% |
| ATTGTCCCACATCGGAAATT+TGG | + | chr5_4:63192416-63192435 | None:intergenic | 40.0% | |
| TGTGTAAGTTCATTGTGCGA+GGG | + | chr5_4:63192459-63192478 | None:intergenic | 40.0% | |
| TTGTGTAAGTTCATTGTGCG+AGG | + | chr5_4:63192460-63192479 | None:intergenic | 40.0% | |
| AAATTTCCACAGAGGAAAGC+TGG | + | chr5_4:63192508-63192527 | None:intergenic | 40.0% | |
| AAACTTGAACCTGGCTACAT+TGG | + | chr5_4:63192839-63192858 | None:intergenic | 40.0% | |
| GATTCGTAAGTAGGATCAGT+AGG | - | chr5_4:63192911-63192930 | Msa0863440:intron | 40.0% | |
| GTATTCCTAGCATTGTAGTC+AGG | + | chr5_4:63193150-63193169 | None:intergenic | 40.0% | |
| TGGATGAAAGTAACGAGAGA+GGG | + | chr5_4:63193626-63193645 | None:intergenic | 40.0% | |
| !! | TACTTCTAGGATACGGTATC+CGG | - | chr5_4:63193853-63193872 | Msa0863440:CDS | 40.0% |
| TCTGAAAGAACACACAACCA+GGG | + | chr5_4:63194092-63194111 | None:intergenic | 40.0% | |
| ATCTGAAAGAACACACAACC+AGG | + | chr5_4:63194093-63194112 | None:intergenic | 40.0% | |
| TGTGTGTTCTTTCAGATACC+TGG | - | chr5_4:63194096-63194115 | Msa0863440:CDS | 40.0% | |
| AAATCCACATTCACAAGTCC+AGG | + | chr5_4:63194117-63194136 | None:intergenic | 40.0% | |
| AAAGCTGTGATGAAAGACTC+TGG | - | chr5_4:63194147-63194166 | Msa0863440:intron | 40.0% | |
| ! | GCTACTTTGGCTCCTTTAAT+TGG | - | chr5_4:63194234-63194253 | Msa0863440:intron | 40.0% |
| TCATCTATTCAATCAGCCAC+TGG | - | chr5_4:63194258-63194277 | Msa0863440:intron | 40.0% | |
| CATCTATTCAATCAGCCACT+GGG | - | chr5_4:63194259-63194278 | Msa0863440:intron | 40.0% | |
| ATCTATTCAATCAGCCACTG+GGG | - | chr5_4:63194260-63194279 | Msa0863440:intron | 40.0% | |
| AATATTATACACCACCCCAG+TGG | + | chr5_4:63194277-63194296 | None:intergenic | 40.0% | |
| GGGGTGGTGTATAATATTAC+TGG | - | chr5_4:63194279-63194298 | Msa0863440:intron | 40.0% | |
| ATATGAAGCACAAACTCGAG+AGG | + | chr5_4:63194653-63194672 | None:intergenic | 40.0% | |
| !! | GTTGTTGATGATCGTTACAC+CGG | - | chr5_4:63194858-63194877 | Msa0863440:intron | 40.0% |
| !! | TTGTTGATGATCGTTACACC+GGG | - | chr5_4:63194859-63194878 | Msa0863440:intron | 40.0% |
| TGCTAAGCTTCTTGACAAAG+TGG | - | chr5_4:63194956-63194975 | Msa0863440:intron | 40.0% | |
| ! | TGTCTTGCTTTCTTTTCCCT+CGG | + | chr5_4:63194982-63195001 | None:intergenic | 40.0% |
| GATAAGTTTGAGGACTTGAG+GGG | + | chr5_4:63195014-63195033 | None:intergenic | 40.0% | |
| GCTACATACACTTAAGCACA+TGG | + | chr5_4:63195209-63195228 | None:intergenic | 40.0% | |
| ! | GTGTGAAACGTTGCGTTTTG+GGG | + | chr5_4:63190174-63190193 | None:intergenic | 45.0% |
| ! | CGTGTGAAACGTTGCGTTTT+GGG | + | chr5_4:63190175-63190194 | None:intergenic | 45.0% |
| ! | ACGTGTGAAACGTTGCGTTT+TGG | + | chr5_4:63190176-63190195 | None:intergenic | 45.0% |
| ! | CAACGTTTCACACGTCGTTT+TGG | - | chr5_4:63190181-63190200 | Msa0863440:three_prime_UTR | 45.0% |
| AATGCCGTTAACCGCATGAT+TGG | - | chr5_4:63190277-63190296 | Msa0863440:three_prime_UTR | 45.0% | |
| GTTAACCGCATGATTGGTAG+TGG | - | chr5_4:63190283-63190302 | Msa0863440:exon | 45.0% | |
| GCAAACCACTACCAATCATG+CGG | + | chr5_4:63190291-63190310 | None:intergenic | 45.0% | |
| !! | CATGATTGGTAGTGGTTTGC+AGG | - | chr5_4:63190291-63190310 | Msa0863440:exon | 45.0% |
| !! | ATTGGTAGTGGTTTGCAGGT+GGG | - | chr5_4:63190295-63190314 | Msa0863440:exon | 45.0% |
| ACTGGCTATGTTGTATGGAG+CGG | - | chr5_4:63190554-63190573 | Msa0863440:intron | 45.0% | |
| GACAACACTAGAGAGAGAGT+TGG | - | chr5_4:63190690-63190709 | Msa0863440:intron | 45.0% | |
| AAGGATAGTAGATCGGATGG+AGG | - | chr5_4:63190797-63190816 | Msa0863440:intron | 45.0% | |
| GAGGATAGTCAATTCACTGG+AGG | - | chr5_4:63190816-63190835 | Msa0863440:intron | 45.0% | |
| ACCCCACTTAGTGTAGGATA+AGG | - | chr5_4:63190958-63190977 | Msa0863440:intron | 45.0% | |
| GCCTTATCCTACACTAAGTG+GGG | + | chr5_4:63190962-63190981 | None:intergenic | 45.0% | |
| ACATTTGCAAGCAAGGAGAG+TGG | + | chr5_4:63191344-63191363 | None:intergenic | 45.0% | |
| !! | CTTGATAGTGATGCAGGTAC+TGG | - | chr5_4:63191432-63191451 | Msa0863440:intron | 45.0% |
| GCTATTGCTGATGCCCTTAA+AGG | - | chr5_4:63191501-63191520 | Msa0863440:intron | 45.0% | |
| GTGTTCATAACAGCTGGGAT+GGG | - | chr5_4:63191534-63191553 | Msa0863440:intron | 45.0% | |
| AGGATATGTAACAACGCCCA+CGG | + | chr5_4:63191625-63191644 | None:intergenic | 45.0% | |
| AGGACGTAAAAGATCCTTGC+AGG | - | chr5_4:63191656-63191675 | Msa0863440:intron | 45.0% | |
| ! | GCAGATGATGTTTTACGCCA+AGG | - | chr5_4:63191915-63191934 | Msa0863440:intron | 45.0% |
| ! | TGTTTTACGCCAAGGAGTTC+AGG | - | chr5_4:63191923-63191942 | Msa0863440:intron | 45.0% |
| ! | GTTTTACGCCAAGGAGTTCA+GGG | - | chr5_4:63191924-63191943 | Msa0863440:intron | 45.0% |
| CTGAAATTCCCTGAACTCCT+TGG | + | chr5_4:63191935-63191954 | None:intergenic | 45.0% | |
| CAAGTCTAATGGGACCAACT+AGG | + | chr5_4:63192036-63192055 | None:intergenic | 45.0% | |
| GCGTGAAGTTCATTTGACCA+GGG | + | chr5_4:63192357-63192376 | None:intergenic | 45.0% | |
| AGCGTGAAGTTCATTTGACC+AGG | + | chr5_4:63192358-63192377 | None:intergenic | 45.0% | |
| GTGTAAGTTCATTGTGCGAG+GGG | + | chr5_4:63192458-63192477 | None:intergenic | 45.0% | |
| GGTGAAAGATCGTAAACACG+AGG | - | chr5_4:63192878-63192897 | Msa0863440:intron | 45.0% | |
| !!! | AGGATCGAGTGCTGGTTTTT+AGG | + | chr5_4:63193130-63193149 | None:intergenic | 45.0% |
| TCGATCCTGACTACAATGCT+AGG | - | chr5_4:63193142-63193161 | Msa0863440:intron | 45.0% | |
| ATCGGTCCCACCAAATTATG+CGG | - | chr5_4:63193218-63193237 | Msa0863440:intron | 45.0% | |
| TATGTGGGACCCGCATAATT+TGG | + | chr5_4:63193231-63193250 | None:intergenic | 45.0% | |
| CGGGTCCCACATAAATTTAG+TGG | - | chr5_4:63193238-63193257 | Msa0863440:intron | 45.0% | |
| GATACGGGTACGATACGATA+CGG | - | chr5_4:63193304-63193323 | Msa0863440:intron | 45.0% | |
| ATACGGGTACGATACGATAC+GGG | - | chr5_4:63193305-63193324 | Msa0863440:intron | 45.0% | |
| GGATGAAAGTAACGAGAGAG+GGG | + | chr5_4:63193625-63193644 | None:intergenic | 45.0% | |
| GTGGATGAAAGTAACGAGAG+AGG | + | chr5_4:63193627-63193646 | None:intergenic | 45.0% | |
| TATCCGATACGTATCCGACA+CGG | - | chr5_4:63193895-63193914 | Msa0863440:CDS | 45.0% | |
| GATACCTGGACTTGTGAATG+TGG | - | chr5_4:63194110-63194129 | Msa0863440:CDS | 45.0% | |
| ! | TTCTGCTCGGTTTTTACCAG+AGG | + | chr5_4:63194199-63194218 | None:intergenic | 45.0% |
| !! | TGTTGATGATCGTTACACCG+GGG | - | chr5_4:63194860-63194879 | Msa0863440:intron | 45.0% |
| AAAAGACTGCGAAAAGCCAG+TGG | + | chr5_4:63194907-63194926 | None:intergenic | 45.0% | |
| AGAAGCTGCTAACAGATCCA+AGG | - | chr5_4:63194931-63194950 | Msa0863440:intron | 45.0% | |
| GAAGCTGCTAACAGATCCAA+GGG | - | chr5_4:63194932-63194951 | Msa0863440:intron | 45.0% | |
| ! | CGGTGCTCTAGATTCAACTT+TGG | + | chr5_4:63195039-63195058 | None:intergenic | 45.0% |
| !!! | TTAGTATTATTTTTAAAAAT+AGG | - | chr5_4:63192605-63192624 | Msa0863440:intron | 5.0% |
| !! | GATTGGTAGTGGTTTGCAGG+TGG | - | chr5_4:63190294-63190313 | Msa0863440:exon | 50.0% |
| !! | TTGGTAGTGGTTTGCAGGTG+GGG | - | chr5_4:63190296-63190315 | Msa0863440:exon | 50.0% |
| CTGGCTATGTTGTATGGAGC+GGG | - | chr5_4:63190555-63190574 | Msa0863440:intron | 50.0% | |
| TGGCTATGTTGTATGGAGCG+GGG | - | chr5_4:63190556-63190575 | Msa0863440:intron | 50.0% | |
| !! | AGATGGTGGAAACTGGCCTT+AGG | - | chr5_4:63190733-63190752 | Msa0863440:intron | 50.0% |
| AGTCAATTCACTGGAGGCAG+AGG | - | chr5_4:63190822-63190841 | Msa0863440:intron | 50.0% | |
| ACTAAGTGGGGTCGACTACA+TGG | + | chr5_4:63190950-63190969 | None:intergenic | 50.0% | |
| TAGTCGACCCCACTTAGTGT+AGG | - | chr5_4:63190952-63190971 | Msa0863440:intron | 50.0% | |
| GCATGGTTGCATAGCATTGC+AGG | + | chr5_4:63191061-63191080 | None:intergenic | 50.0% | |
| GCTAATGCGCTCACAATTGC+TGG | - | chr5_4:63191139-63191158 | Msa0863440:CDS | 50.0% | |
| ! | ATTGGAGAGCTTCTGACTCG+TGG | - | chr5_4:63191308-63191327 | Msa0863440:intron | 50.0% |
| ! | GAGCTTCTGACTCGTGGATT+AGG | - | chr5_4:63191314-63191333 | Msa0863440:intron | 50.0% |
| !! | GATAGTGATGCAGGTACTGG+CGG | - | chr5_4:63191435-63191454 | Msa0863440:intron | 50.0% |
| !! | ATAGTGATGCAGGTACTGGC+GGG | - | chr5_4:63191436-63191455 | Msa0863440:intron | 50.0% |
| ! | TACTGGCGGGAATCCACTTT+TGG | - | chr5_4:63191449-63191468 | Msa0863440:intron | 50.0% |
| !! | ACTGGCGGGAATCCACTTTT+GGG | - | chr5_4:63191450-63191469 | Msa0863440:intron | 50.0% |
| ! | ACTTTTGGGCGAACAAGCTG+CGG | - | chr5_4:63191464-63191483 | Msa0863440:intron | 50.0% |
| ACAAGCTGCGGAGGAATCAA+AGG | - | chr5_4:63191476-63191495 | Msa0863440:intron | 50.0% | |
| GGTGTTCATAACAGCTGGGA+TGG | - | chr5_4:63191533-63191552 | Msa0863440:intron | 50.0% | |
| TTCATAACAGCTGGGATGGG+TGG | - | chr5_4:63191537-63191556 | Msa0863440:intron | 50.0% | |
| TCATAACAGCTGGGATGGGT+GGG | - | chr5_4:63191538-63191557 | Msa0863440:intron | 50.0% | |
| CGTAAAAGATCCTTGCAGGC+AGG | - | chr5_4:63191660-63191679 | Msa0863440:intron | 50.0% | |
| !! | AGACGAAAAGCATCCTGGAG+TGG | + | chr5_4:63191894-63191913 | None:intergenic | 50.0% |
| !! | CTGCAAGACGAAAAGCATCC+TGG | + | chr5_4:63191899-63191918 | None:intergenic | 50.0% |
| CATGTGACCTGTTGTGTGCA+AGG | - | chr5_4:63192140-63192159 | Msa0863440:intron | 50.0% | |
| TACTCACCAGCTTTCCTCTG+TGG | - | chr5_4:63192499-63192518 | Msa0863440:intron | 50.0% | |
| TGCTAGGAACCAATGTAGCC+AGG | - | chr5_4:63192827-63192846 | Msa0863440:intron | 50.0% | |
| TTGTAGTCAGGATCGAGTGC+TGG | + | chr5_4:63193138-63193157 | None:intergenic | 50.0% | |
| TCGGTCCCACCAAATTATGC+GGG | - | chr5_4:63193219-63193238 | Msa0863440:intron | 50.0% | |
| TGGGACCCGCATAATTTGGT+GGG | + | chr5_4:63193227-63193246 | None:intergenic | 50.0% | |
| ACTACGTATCCGGGCTTCAT+AGG | + | chr5_4:63193282-63193301 | None:intergenic | 50.0% | |
| TATCGGATACCGATACTCCG+CGG | + | chr5_4:63193884-63193903 | None:intergenic | 50.0% | |
| ATCCGATACGTATCCGACAC+GGG | - | chr5_4:63193896-63193915 | Msa0863440:CDS | 50.0% | |
| TACCCGTGTCGGATACGTAT+CGG | + | chr5_4:63193901-63193920 | None:intergenic | 50.0% | |
| ATACGTATCCGACACGGGTA+CGG | - | chr5_4:63193901-63193920 | Msa0863440:CDS | 50.0% | |
| !!! | CGGCACCATTTTGGAGTATC+CGG | - | chr5_4:63193921-63193940 | Msa0863440:intron | 50.0% |
| !!! | GGCACCATTTTGGAGTATCC+GGG | - | chr5_4:63193922-63193941 | Msa0863440:intron | 50.0% |
| GAAGCCCGGATACTCCAAAA+TGG | + | chr5_4:63193929-63193948 | None:intergenic | 50.0% | |
| ACCAGGGTTGTCAAACTCGA+GGG | + | chr5_4:63194076-63194095 | None:intergenic | 50.0% | |
| AACCAGGGTTGTCAAACTCG+AGG | + | chr5_4:63194077-63194096 | None:intergenic | 50.0% | |
| GACTCTGGTACTGCAATGCT+CGG | - | chr5_4:63194162-63194181 | Msa0863440:intron | 50.0% | |
| ! | GTTCTGCTGCTTCTTCTGCT+CGG | + | chr5_4:63194212-63194231 | None:intergenic | 50.0% |
| AGCAGAAGAAGCAGCAGAAC+AGG | - | chr5_4:63194212-63194231 | Msa0863440:intron | 50.0% | |
| AGCAGCAGAACAGGCTACTT+TGG | - | chr5_4:63194221-63194240 | Msa0863440:intron | 50.0% | |
| TATTCAATCAGCCACTGGGG+TGG | - | chr5_4:63194263-63194282 | Msa0863440:intron | 50.0% | |
| AGGAAAGGACATTACCCTGC+AGG | - | chr5_4:63194302-63194321 | Msa0863440:intron | 50.0% | |
| TTACCCTGCAGGAAGTCAAC+AGG | - | chr5_4:63194313-63194332 | Msa0863440:intron | 50.0% | |
| TACCCTGCAGGAAGTCAACA+GGG | - | chr5_4:63194314-63194333 | Msa0863440:intron | 50.0% | |
| !! | TACCCTGTTGACTTCCTGCA+GGG | + | chr5_4:63194319-63194338 | None:intergenic | 50.0% |
| !! | ATACCCTGTTGACTTCCTGC+AGG | + | chr5_4:63194320-63194339 | None:intergenic | 50.0% |
| ! | GGAAGTCAACAGGGTATCTC+AGG | - | chr5_4:63194323-63194342 | Msa0863440:intron | 50.0% |
| GATAGTCACGTGAATCTCCC+CGG | + | chr5_4:63194880-63194899 | None:intergenic | 50.0% | |
| TCAAGAAGCTTAGCAGCCCT+TGG | + | chr5_4:63194951-63194970 | None:intergenic | 50.0% | |
| CTTCTTGACAAAGTGGCCGA+GGG | - | chr5_4:63194963-63194982 | Msa0863440:intron | 50.0% | |
| TTTGAGGACTTGAGGGGAGT+GGG | + | chr5_4:63195008-63195027 | None:intergenic | 50.0% | |
| AAAAAGAGCTTTCGTGGGGG+CGG | + | chr5_4:63195059-63195078 | None:intergenic | 50.0% | |
| AAGGTCGTTGGAATTGGGGG+TGG | - | chr5_4:63190247-63190266 | Msa0863440:three_prime_UTR | 55.0% | |
| !! | GGAGCGGGGTATTGATTGAG+CGG | - | chr5_4:63190570-63190589 | Msa0863440:intron | 55.0% |
| !! | TGGTGGAAACTGGCCTTAGG+TGG | - | chr5_4:63190736-63190755 | Msa0863440:intron | 55.0% |
| ! | GCAGCTTGTTCGCCCAAAAG+TGG | + | chr5_4:63191465-63191484 | None:intergenic | 55.0% |
| CATAACAGCTGGGATGGGTG+GGG | - | chr5_4:63191539-63191558 | Msa0863440:intron | 55.0% | |
| ATAACAGCTGGGATGGGTGG+GGG | - | chr5_4:63191540-63191559 | Msa0863440:intron | 55.0% | |
| AGAGGCAGGTTACTTGACCG+TGG | - | chr5_4:63191605-63191624 | Msa0863440:intron | 55.0% | |
| GAGGCAGGTTACTTGACCGT+GGG | - | chr5_4:63191606-63191625 | Msa0863440:intron | 55.0% | |
| AGTAGGAACACCTGCCTGCA+AGG | + | chr5_4:63191673-63191692 | None:intergenic | 55.0% | |
| GTCGTGCTTCGACTTTGCTC+AGG | + | chr5_4:63193076-63193095 | None:intergenic | 55.0% | |
| GCAAAGTCGAAGCACGACTG+AGG | - | chr5_4:63193078-63193097 | Msa0863440:intron | 55.0% | |
| GTGGGACCCGCATAATTTGG+TGG | + | chr5_4:63193228-63193247 | None:intergenic | 55.0% | |
| CCGTATCGCACTACGTATCC+GGG | + | chr5_4:63193291-63193310 | None:intergenic | 55.0% | |
| CCCGGATACGTAGTGCGATA+CGG | - | chr5_4:63193288-63193307 | Msa0863440:intron | 55.0% | |
| CCCGTATCGCACTACGTATC+CGG | + | chr5_4:63193292-63193311 | None:intergenic | 55.0% | |
| CCGGATACGTAGTGCGATAC+GGG | - | chr5_4:63193289-63193308 | Msa0863440:intron | 55.0% | |
| ! | TACGGTATCCGGAGTATCCG+CGG | - | chr5_4:63193864-63193883 | Msa0863440:CDS | 55.0% |
| !! | AAATGGTGCCGTACCCGTGT+CGG | + | chr5_4:63193912-63193931 | None:intergenic | 55.0% |
| ! | ACACGGGTACGGCACCATTT+TGG | - | chr5_4:63193912-63193931 | Msa0863440:CDS | 55.0% |
| ACCCTCGAGTTTGACAACCC+TGG | - | chr5_4:63194072-63194091 | Msa0863440:CDS | 55.0% | |
| GGTACTGCAATGCTCGGAGT+AGG | - | chr5_4:63194168-63194187 | Msa0863440:intron | 55.0% | |
| CTCGGAGTAGGTGTTTCCTC+TGG | - | chr5_4:63194180-63194199 | Msa0863440:intron | 55.0% | |
| CACGTGACTATCATCGCCAC+TGG | - | chr5_4:63194888-63194907 | Msa0863440:intron | 55.0% | |
| GCTTCTTGACAAAGTGGCCG+AGG | - | chr5_4:63194962-63194981 | Msa0863440:intron | 55.0% | |
| GTTTGAGGACTTGAGGGGAG+TGG | + | chr5_4:63195009-63195028 | None:intergenic | 55.0% | |
| GTCGTTGGAATTGGGGGTGG+TGG | - | chr5_4:63190250-63190269 | Msa0863440:three_prime_UTR | 60.0% | |
| TTTGGGCGAACAAGCTGCGG+AGG | - | chr5_4:63191467-63191486 | Msa0863440:intron | 60.0% | |
| TGACGAGCAGATGCCACTCC+AGG | - | chr5_4:63191878-63191897 | Msa0863440:intron | 60.0% | |
| GTCGAAGCACGACTGAGGTG+CGG | - | chr5_4:63193083-63193102 | Msa0863440:intron | 60.0% | |
| AAGCACGACTGAGGTGCGGT+GGG | - | chr5_4:63193087-63193106 | Msa0863440:intron | 60.0% | |
| CCGATACTCCGCGGATACTC+CGG | + | chr5_4:63193875-63193894 | None:intergenic | 60.0% | |
| ! | CCGGAGTATCCGCGGAGTAT+CGG | - | chr5_4:63193872-63193891 | Msa0863440:CDS | 60.0% |
| ! | CTGGGATGGGTGGGGGTACA+GGG | - | chr5_4:63191547-63191566 | Msa0863440:intron | 65.0% |
| ! | ATGGGTGGGGGTACAGGGTC+CGG | - | chr5_4:63191552-63191571 | Msa0863440:intron | 65.0% |
| AGCCACAACTGGGGCAGCAC+CGG | + | chr5_4:63191574-63191593 | None:intergenic | 65.0% | |
| GAAGCACGACTGAGGTGCGG+TGG | - | chr5_4:63193086-63193105 | Msa0863440:intron | 65.0% | |
| ACTGAGGTGCGGTGGGACGT+AGG | - | chr5_4:63193094-63193113 | Msa0863440:intron | 65.0% | |
| ! | GCTGGGATGGGTGGGGGTAC+AGG | - | chr5_4:63191546-63191565 | Msa0863440:intron | 70.0% |
| !! | GTCCGGTGCTGCCCCAGTTG+TGG | - | chr5_4:63191569-63191588 | Msa0863440:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 63189964 | 63195415 | 63189964 | ID=Msa0863440;Name=Msa0863440 |
| chr5_4 | mRNA | 63189964 | 63195415 | 63189964 | ID=Msa0863440-mRNA-1;Parent=Msa0863440;Name=Msa0863440-mRNA-1;_AED=0.08;_eAED=0.08;_QI=97|1|1|1|0.8|0.83|6|333|418 |
| chr5_4 | exon | 63189964 | 63190569 | 63189964 | ID=Msa0863440-mRNA-1:exon:19921;Parent=Msa0863440-mRNA-1 |
| chr5_4 | exon | 63191035 | 63191268 | 63191035 | ID=Msa0863440-mRNA-1:exon:19920;Parent=Msa0863440-mRNA-1 |
| chr5_4 | exon | 63193414 | 63193581 | 63193414 | ID=Msa0863440-mRNA-1:exon:19919;Parent=Msa0863440-mRNA-1 |
| chr5_4 | exon | 63193702 | 63193931 | 63193702 | ID=Msa0863440-mRNA-1:exon:19918;Parent=Msa0863440-mRNA-1 |
| chr5_4 | exon | 63194044 | 63194143 | 63194044 | ID=Msa0863440-mRNA-1:exon:19917;Parent=Msa0863440-mRNA-1 |
| chr5_4 | exon | 63195067 | 63195415 | 63195067 | ID=Msa0863440-mRNA-1:exon:19916;Parent=Msa0863440-mRNA-1 |
| chr5_4 | five_prime_UTR | 63195319 | 63195415 | 63195319 | ID=Msa0863440-mRNA-1:five_prime_utr;Parent=Msa0863440-mRNA-1 |
| chr5_4 | CDS | 63195067 | 63195318 | 63195067 | ID=Msa0863440-mRNA-1:cds;Parent=Msa0863440-mRNA-1 |
| chr5_4 | CDS | 63194044 | 63194143 | 63194044 | ID=Msa0863440-mRNA-1:cds;Parent=Msa0863440-mRNA-1 |
| chr5_4 | CDS | 63193702 | 63193931 | 63193702 | ID=Msa0863440-mRNA-1:cds;Parent=Msa0863440-mRNA-1 |
| chr5_4 | CDS | 63193414 | 63193581 | 63193414 | ID=Msa0863440-mRNA-1:cds;Parent=Msa0863440-mRNA-1 |
| chr5_4 | CDS | 63191035 | 63191268 | 63191035 | ID=Msa0863440-mRNA-1:cds;Parent=Msa0863440-mRNA-1 |
| chr5_4 | CDS | 63190297 | 63190569 | 63190297 | ID=Msa0863440-mRNA-1:cds;Parent=Msa0863440-mRNA-1 |
| chr5_4 | three_prime_UTR | 63189964 | 63190296 | 63189964 | ID=Msa0863440-mRNA-1:three_prime_utr;Parent=Msa0863440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
