Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026326.t1 | RHN78223.1 | 74.3 | 350 | 63 | 3 | 166 | 504 | 20 | 353 | 5.70E-125 | 458 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026326.t1 | Q8L3W1 | 23.8 | 319 | 200 | 9 | 166 | 444 | 21 | 336 | 2.8e-11 | 71.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026326.t1 | A0A396JPN4 | 74.3 | 350 | 63 | 3 | 166 | 504 | 20 | 353 | 4.1e-125 | 458.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene026326.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026326.t1 | MTR_1g035570 | 67.919 | 346 | 57 | 4 | 166 | 504 | 20 | 318 | 4.46e-147 | 427 |
| MS.gene026326.t1 | MTR_1g035640 | 50.437 | 343 | 119 | 4 | 166 | 491 | 20 | 328 | 9.24e-104 | 318 |
| MS.gene026326.t1 | MTR_1g035490 | 64.754 | 244 | 59 | 6 | 277 | 504 | 20 | 252 | 5.09e-85 | 266 |
| MS.gene026326.t1 | MTR_1g035620 | 43.750 | 352 | 143 | 9 | 166 | 504 | 24 | 333 | 2.90e-80 | 256 |
| MS.gene026326.t1 | MTR_1g050845 | 42.898 | 352 | 133 | 9 | 166 | 504 | 24 | 320 | 2.79e-73 | 248 |
| MS.gene026326.t1 | MTR_6g061070 | 33.426 | 359 | 207 | 10 | 167 | 499 | 34 | 386 | 9.12e-49 | 175 |
| MS.gene026326.t1 | MTR_1g035650 | 43.750 | 208 | 80 | 4 | 166 | 364 | 24 | 203 | 1.52e-44 | 155 |
| MS.gene026326.t1 | MTR_7g050710 | 31.922 | 307 | 174 | 10 | 166 | 454 | 28 | 317 | 2.13e-33 | 129 |
| MS.gene026326.t1 | MTR_5g044670 | 30.169 | 295 | 174 | 7 | 167 | 448 | 32 | 307 | 2.10e-32 | 127 |
| MS.gene026326.t1 | MTR_3g098790 | 31.469 | 286 | 173 | 8 | 167 | 444 | 29 | 299 | 1.80e-30 | 121 |
| MS.gene026326.t1 | MTR_7g050590 | 32.986 | 288 | 174 | 10 | 167 | 444 | 2 | 280 | 2.00e-30 | 120 |
| MS.gene026326.t1 | MTR_7g050560 | 32.281 | 285 | 163 | 9 | 167 | 444 | 29 | 290 | 3.46e-30 | 120 |
| MS.gene026326.t1 | MTR_1g035510 | 33.333 | 225 | 134 | 8 | 167 | 387 | 2 | 214 | 2.79e-29 | 115 |
| MS.gene026326.t1 | MTR_1g108780 | 30.164 | 305 | 175 | 11 | 163 | 448 | 9 | 294 | 3.45e-28 | 117 |
| MS.gene026326.t1 | MTR_7g050720 | 31.293 | 294 | 182 | 12 | 167 | 444 | 26 | 315 | 4.33e-27 | 111 |
| MS.gene026326.t1 | MTR_7g050580 | 33.217 | 286 | 159 | 10 | 167 | 444 | 29 | 290 | 8.22e-27 | 110 |
| MS.gene026326.t1 | MTR_1g035480 | 47.664 | 107 | 53 | 2 | 167 | 273 | 33 | 136 | 2.01e-25 | 103 |
| MS.gene026326.t1 | MTR_8g103940 | 28.378 | 296 | 185 | 7 | 166 | 448 | 54 | 335 | 8.91e-25 | 107 |
| MS.gene026326.t1 | MTR_3g061310 | 27.143 | 280 | 181 | 8 | 166 | 442 | 25 | 284 | 1.44e-24 | 103 |
| MS.gene026326.t1 | MTR_1g033740 | 42.727 | 110 | 60 | 2 | 167 | 276 | 38 | 144 | 1.54e-24 | 101 |
| MS.gene026326.t1 | MTR_1g035460 | 25.157 | 318 | 205 | 8 | 167 | 462 | 2 | 308 | 6.93e-24 | 103 |
| MS.gene026326.t1 | MTR_3g061340 | 27.113 | 284 | 165 | 12 | 166 | 442 | 25 | 273 | 4.04e-23 | 99.4 |
| MS.gene026326.t1 | MTR_3g061350 | 25.430 | 291 | 171 | 9 | 166 | 442 | 25 | 283 | 9.01e-23 | 98.6 |
| MS.gene026326.t1 | MTR_1g035470 | 40.909 | 110 | 62 | 2 | 167 | 276 | 2 | 108 | 2.16e-22 | 93.6 |
| MS.gene026326.t1 | MTR_3g061320 | 24.913 | 289 | 170 | 9 | 166 | 442 | 25 | 278 | 1.68e-21 | 94.7 |
| MS.gene026326.t1 | MTR_1g035500 | 44.340 | 106 | 56 | 2 | 167 | 272 | 41 | 143 | 2.09e-21 | 92.0 |
| MS.gene026326.t1 | MTR_4g119990 | 26.370 | 292 | 189 | 8 | 166 | 442 | 30 | 310 | 7.13e-21 | 94.7 |
| MS.gene026326.t1 | MTR_3g061370 | 24.221 | 289 | 177 | 7 | 166 | 442 | 22 | 280 | 7.39e-21 | 93.2 |
| MS.gene026326.t1 | MTR_1g035520 | 27.243 | 301 | 188 | 9 | 167 | 442 | 88 | 382 | 2.13e-20 | 93.6 |
| MS.gene026326.t1 | MTR_6g043890 | 25.547 | 274 | 183 | 7 | 166 | 430 | 30 | 291 | 3.57e-19 | 89.4 |
| MS.gene026326.t1 | MTR_3g061330 | 30.968 | 155 | 99 | 4 | 166 | 314 | 25 | 177 | 6.52e-17 | 80.9 |
| MS.gene026326.t1 | MTR_3g061290 | 36.792 | 106 | 63 | 2 | 166 | 269 | 25 | 128 | 2.58e-16 | 78.2 |
| MS.gene026326.t1 | MTR_1g034210 | 25.072 | 347 | 193 | 12 | 166 | 449 | 22 | 364 | 1.70e-13 | 72.4 |
| MS.gene026326.t1 | MTR_7g050640 | 38.596 | 114 | 63 | 4 | 143 | 249 | 2 | 115 | 1.75e-13 | 67.4 |
| MS.gene026326.t1 | MTR_1g021270 | 23.567 | 314 | 189 | 10 | 166 | 432 | 30 | 339 | 1.86e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026326.t1 | AT3G18990 | 24.923 | 325 | 195 | 10 | 166 | 447 | 21 | 339 | 1.24e-17 | 85.1 |
| MS.gene026326.t1 | AT3G18990 | 25.077 | 323 | 193 | 10 | 166 | 445 | 21 | 337 | 2.76e-17 | 83.6 |
Find 96 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTGGTTAAATCATTTC+TGG | 0.109086 | 1.2:+20429041 | None:intergenic |
| TTTGCAAAGCCTTTCAAATA+TGG | 0.180110 | 1.2:-20426284 | MS.gene026326:CDS |
| CTTCAAAATTGCATGAAATT+AGG | 0.216636 | 1.2:-20429102 | None:intergenic |
| TATTTCTCCACATATTTCTT+TGG | 0.248757 | 1.2:+20426419 | None:intergenic |
| TTCATCAACTGATTTGATAT+TGG | 0.261684 | 1.2:+20426178 | None:intergenic |
| CATTAACAGCTTCAGATCTT+AGG | 0.270045 | 1.2:+20425576 | None:intergenic |
| TTTCTGGATTTCATTCTAAC+AGG | 0.272584 | 1.2:+20429057 | None:intergenic |
| AAAATAGTGAACTTCCTTCT+AGG | 0.272740 | 1.2:-20428594 | MS.gene026326:CDS |
| CTTCTCAGTGTATTTCTTCC+TGG | 0.274768 | 1.2:+20429026 | None:intergenic |
| AGAAATATGTGGAGAAATAT+TGG | 0.281812 | 1.2:-20426415 | MS.gene026326:CDS |
| TGGAGAGTAATGGTGATATT+TGG | 0.287546 | 1.2:-20426328 | MS.gene026326:CDS |
| CTGTGTCATCTGGCCAAACT+TGG | 0.293622 | 1.2:-20428469 | MS.gene026326:CDS |
| TTAATGGAACCACAACAATA+AGG | 0.298328 | 1.2:-20425383 | MS.gene026326:CDS |
| CTCTTAACTTTCAAATTCAT+TGG | 0.314459 | 1.2:-20426257 | MS.gene026326:CDS |
| TTAGGAAACTTAAGGAATAT+AGG | 0.318222 | 1.2:+20426377 | None:intergenic |
| ATAGTAACATTGAATGAAAT+TGG | 0.319993 | 1.2:+20425213 | None:intergenic |
| AGAAAACCTAGTGATTTCTT+TGG | 0.323706 | 1.2:+20425165 | None:intergenic |
| TCACACTGCATAGCATTATT+AGG | 0.329347 | 1.2:+20428443 | None:intergenic |
| CATTATTAGGATCCCAAGTT+TGG | 0.331035 | 1.2:+20428456 | None:intergenic |
| AGAGCAATACCCTTTACTTT+TGG | 0.331691 | 1.2:+20424974 | None:intergenic |
| CCTAGTGATTTCTTTGGCTT+TGG | 0.332979 | 1.2:+20425171 | None:intergenic |
| CTGGTCCTTTGAGTTTGCTT+TGG | 0.341746 | 1.2:+20425993 | None:intergenic |
| TAGGAAACTTAAGGAATATA+GGG | 0.346499 | 1.2:+20426378 | None:intergenic |
| TGTTCTCTTGAAAACTCATT+TGG | 0.346666 | 1.2:+20425417 | None:intergenic |
| TCCTTCTCCTTCATGATTAC+CGG | 0.350959 | 1.2:+20428661 | None:intergenic |
| ACTTTCTTCACCTTCTTCAA+TGG | 0.380996 | 1.2:+20426055 | None:intergenic |
| CAGGTTGATGATTCCTTGTC+TGG | 0.387948 | 1.2:-20428955 | MS.gene026326:CDS |
| AGGGTTGTTTCTGTGTCATC+TGG | 0.389927 | 1.2:-20428479 | MS.gene026326:CDS |
| TAATGGAACCACAACAATAA+GGG | 0.391268 | 1.2:-20425382 | MS.gene026326:CDS |
| CAGTTCAAAGGATATGCTCT+TGG | 0.392548 | 1.2:-20428539 | MS.gene026326:CDS |
| CAACACCGTTAGGAAACTTA+AGG | 0.403140 | 1.2:+20426369 | None:intergenic |
| ATAGTTTATTTCTAAAGTAT+TGG | 0.406626 | 1.2:+20426202 | None:intergenic |
| GTGGTGGATGGAAAATATTC+AGG | 0.420444 | 1.2:-20425293 | MS.gene026326:CDS |
| TAACTTGTCTGGCAAGAAAC+AGG | 0.426929 | 1.2:-20428974 | MS.gene026326:CDS |
| CAAACTCAAAGGACCAGAAA+TGG | 0.451853 | 1.2:-20425987 | MS.gene026326:CDS |
| GGTAACTTAGCCTCCCTAGA+AGG | 0.459144 | 1.2:+20428580 | None:intergenic |
| AATGTGGAGAATAACTTGTC+TGG | 0.462624 | 1.2:-20428985 | MS.gene026326:CDS |
| CAAACTGATATTGACTTGTC+TGG | 0.464491 | 1.2:-20428925 | MS.gene026326:CDS |
| TTGTGAAGAACTAGTGTTGA+AGG | 0.466818 | 1.2:+20428637 | None:intergenic |
| TTAACTTTCAAATTCATTGG+TGG | 0.475675 | 1.2:-20426254 | MS.gene026326:CDS |
| AGGAGCCATCCAAAAGTAAA+GGG | 0.477165 | 1.2:-20424983 | MS.gene026326:intron |
| TAGGAGCCATCCAAAAGTAA+AGG | 0.478853 | 1.2:-20424984 | MS.gene026326:CDS |
| ATTACCAACCCTTATTGTTG+TGG | 0.480026 | 1.2:+20425374 | None:intergenic |
| TGTGTCATCTGGCCAAACTT+GGG | 0.480633 | 1.2:-20428468 | MS.gene026326:CDS |
| ATGCATGCACGGTCATTCCC+AGG | 0.485665 | 1.2:-20428499 | MS.gene026326:CDS |
| CAAAGTGGCCATGGTAAAGA+AGG | 0.488314 | 1.2:-20425609 | MS.gene026326:CDS |
| TGACATTATAACTTCAAAAG+AGG | 0.495408 | 1.2:+20425547 | None:intergenic |
| GGCTCTAATAATAAGAATGA+AGG | 0.500504 | 1.2:-20429081 | MS.gene026326:CDS |
| CTGATAGCAACAGCCATGTC+AGG | 0.504058 | 1.2:+20428559 | None:intergenic |
| AAATAGTGAACTTCCTTCTA+GGG | 0.514324 | 1.2:-20428593 | MS.gene026326:CDS |
| AAGAGATATCCATATTTGAA+AGG | 0.520085 | 1.2:+20426275 | None:intergenic |
| AGTTCAAAGGATATGCTCTT+GGG | 0.522027 | 1.2:-20428538 | MS.gene026326:CDS |
| AATGGCAAGAGAAAATTCTC+AGG | 0.523324 | 1.2:-20425969 | MS.gene026326:intron |
| GACATTATAACTTCAAAAGA+GGG | 0.525934 | 1.2:+20425548 | None:intergenic |
| AAGACATTGGAGGAACATCT+AGG | 0.526190 | 1.2:-20425003 | MS.gene026326:CDS |
| GAAGGAGCACAAGACATTCA+AGG | 0.537945 | 1.2:-20424581 | MS.gene026326:CDS |
| AATATCAAATCAGTTGATGA+AGG | 0.540855 | 1.2:-20426176 | MS.gene026326:CDS |
| GATATGCTCTTGGGTAGCGC+TGG | 0.542776 | 1.2:-20428529 | MS.gene026326:CDS |
| GATGAGGAAGCCATTGAAGA+AGG | 0.544836 | 1.2:-20426065 | MS.gene026326:CDS |
| GGCTGTTGCTATCAGTTCAA+AGG | 0.548945 | 1.2:-20428551 | MS.gene026326:CDS |
| CCAAAGCCAAAGAAATCACT+AGG | 0.556666 | 1.2:-20425171 | MS.gene026326:intron |
| GTTGTAAAGAAGCAAGACAT+TGG | 0.558494 | 1.2:-20425016 | MS.gene026326:CDS |
| CAATAAGGGTTGGTAATGAA+AGG | 0.558627 | 1.2:-20425368 | MS.gene026326:CDS |
| TACAGAAGGTCGTGATGTGA+AGG | 0.563378 | 1.2:-20424599 | MS.gene026326:intron |
| AAGTGATGAATCAAGTGATG+AGG | 0.567308 | 1.2:-20426081 | MS.gene026326:CDS |
| TTCTGGATTTCATTCTAACA+GGG | 0.573037 | 1.2:+20429058 | None:intergenic |
| AGGTAGTAACAAAGTGGCCA+TGG | 0.577811 | 1.2:-20425618 | MS.gene026326:CDS |
| AGTTTGTTGCTTGCCAGACA+AGG | 0.581143 | 1.2:+20428942 | None:intergenic |
| TGAATTGTCTGGTAAGACAC+AGG | 0.583987 | 1.2:-20428884 | MS.gene026326:intron |
| AATATTGTATGGGTGGTGGA+TGG | 0.587908 | 1.2:-20425305 | MS.gene026326:CDS |
| GTAAATTTGAGATGATTCAA+CGG | 0.588165 | 1.2:-20425239 | MS.gene026326:CDS |
| GGTGCTGAAGACACAGAAGA+AGG | 0.588176 | 1.2:-20426155 | MS.gene026326:CDS |
| ATATTCCTTAAGTTTCCTAA+CGG | 0.590322 | 1.2:-20426374 | MS.gene026326:CDS |
| GAGTAATGAGAGTTCAGATG+AGG | 0.591415 | 1.2:-20426024 | MS.gene026326:CDS |
| GAGGGTTCCAAAGAAATATG+TGG | 0.594786 | 1.2:-20426426 | MS.gene026326:CDS |
| ACCGGTAATCATGAAGGAGA+AGG | 0.597010 | 1.2:-20428662 | MS.gene026326:CDS |
| GTAAAGAAGCAAGACATTGG+AGG | 0.602206 | 1.2:-20425013 | MS.gene026326:CDS |
| ACTTACAAAGAAATAGCCAT+TGG | 0.605595 | 1.2:+20425514 | None:intergenic |
| ATGTCACAATCTTACGCCAA+TGG | 0.605717 | 1.2:-20425530 | MS.gene026326:CDS |
| GGTTGGTAATGAAAGGAGTG+TGG | 0.605745 | 1.2:-20425361 | MS.gene026326:CDS |
| GGAACCACAACAATAAGGGT+TGG | 0.608476 | 1.2:-20425378 | MS.gene026326:CDS |
| TGTTTCACCGGTAATCATGA+AGG | 0.608551 | 1.2:-20428668 | MS.gene026326:CDS |
| CAGGAAGAAATACACTGAGA+AGG | 0.616674 | 1.2:-20429025 | MS.gene026326:CDS |
| TATGTGGAGAAATATTGGAA+AGG | 0.617787 | 1.2:-20426410 | MS.gene026326:CDS |
| TGCATGCACGGTCATTCCCA+GGG | 0.620980 | 1.2:-20428498 | MS.gene026326:CDS |
| GGAGGCTAAGTTACCTGACA+TGG | 0.622042 | 1.2:-20428572 | MS.gene026326:CDS |
| TTTCGTGAAGAACAAAACCC+CGG | 0.628138 | 1.2:-20424557 | None:intergenic |
| TGATGATGTGACTGTTTCAC+CGG | 0.631868 | 1.2:-20428680 | MS.gene026326:CDS |
| AATCCAGAAATGATTTAACC+AGG | 0.638575 | 1.2:-20429044 | MS.gene026326:CDS |
| CTGGACATGATATGCATGCA+CGG | 0.645078 | 1.2:-20428510 | MS.gene026326:CDS |
| TAGTGAACTTCCTTCTAGGG+AGG | 0.654464 | 1.2:-20428590 | MS.gene026326:CDS |
| AAATACCAAAGCAAACTCAA+AGG | 0.654830 | 1.2:-20425998 | MS.gene026326:CDS |
| GGAGTGTGGAAGTGAGTGTG+AGG | 0.659449 | 1.2:-20425347 | MS.gene026326:CDS |
| GATGACACAGAAACAACCCT+GGG | 0.667180 | 1.2:+20428482 | None:intergenic |
| CTTGGCAGGTAGTAACAAAG+TGG | 0.671173 | 1.2:-20425624 | MS.gene026326:intron |
| AGATGACACAGAAACAACCC+TGG | 0.682054 | 1.2:+20428481 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTGTAACTTTTAATT+TGG | - | chr1.2:20428742-20428761 | MS.gene026326:intron | 10.0% |
| !!! | CAAATATATCTAAATTTTTT+GGG | - | chr1.2:20428978-20428997 | MS.gene026326:CDS | 10.0% |
| !!! | TCAAATATATCTAAATTTTT+TGG | - | chr1.2:20428977-20428996 | MS.gene026326:CDS | 10.0% |
| !! | AAACTTATGAATGATTTATA+AGG | - | chr1.2:20428770-20428789 | MS.gene026326:intron | 15.0% |
| !! | AACCAAATACTTATATATTA+TGG | + | chr1.2:20426139-20426158 | None:intergenic | 15.0% |
| !! | AATATTAGATGTTAATCAAA+CGG | + | chr1.2:20428558-20428577 | None:intergenic | 15.0% |
| !! | ATTCATTAATCAAACATATA+AGG | + | chr1.2:20425656-20425675 | None:intergenic | 15.0% |
| !! | ATTTGAATAGATTTATAGTT+AGG | + | chr1.2:20428963-20428982 | None:intergenic | 15.0% |
| !! | TAAAAAATATTTCAATTCAC+AGG | + | chr1.2:20428846-20428865 | None:intergenic | 15.0% |
| !!! | AAAATGTGATTTTTTTTTGT+AGG | - | chr1.2:20427886-20427905 | MS.gene026326:intron | 15.0% |
| !!! | ATAGTTTATTTCTAAAGTAT+TGG | + | chr1.2:20427449-20427468 | None:intergenic | 15.0% |
| !!! | ATATTTGGTTTCAAAAAAAT+TGG | - | chr1.2:20427335-20427354 | MS.gene026326:intron | 15.0% |
| !!! | ATTTAATCAATTTTGTTAGT+TGG | - | chr1.2:20426415-20426434 | MS.gene026326:CDS | 15.0% |
| !!! | ATTTTCTATCTAATTTTTTC+TGG | + | chr1.2:20426852-20426871 | None:intergenic | 15.0% |
| !!! | TAAAGATATTTTTTGTAGTA+TGG | + | chr1.2:20426929-20426948 | None:intergenic | 15.0% |
| !!! | TATTTGGTTTCAAAAAAATT+GGG | - | chr1.2:20427336-20427355 | MS.gene026326:intron | 15.0% |
| !!! | TATTTTAAGGTTAAGATATT+TGG | - | chr1.2:20427421-20427440 | MS.gene026326:intron | 15.0% |
| !!! | TGTTGAACAAAAAATATTTT+GGG | - | chr1.2:20427297-20427316 | MS.gene026326:intron | 15.0% |
| !!! | TTAGATTTTATTATTGTAGA+GGG | - | chr1.2:20428713-20428732 | MS.gene026326:intron | 15.0% |
| !!! | TTATTTTAAGAGTTATTGAA+TGG | - | chr1.2:20427781-20427800 | MS.gene026326:intron | 15.0% |
| !!! | TTCTTTCTTTCTTTTTTATT+TGG | - | chr1.2:20428502-20428521 | MS.gene026326:CDS | 15.0% |
| !!! | TTTAGATTTTATTATTGTAG+AGG | - | chr1.2:20428712-20428731 | MS.gene026326:intron | 15.0% |
| !! | ATAGTAACATTGAATGAAAT+TGG | + | chr1.2:20428438-20428457 | None:intergenic | 20.0% |
| !! | ATTATGCATGTATATATTAC+AGG | - | chr1.2:20426200-20426219 | MS.gene026326:CDS | 20.0% |
| !! | CACCATAATATATAAGTATT+TGG | - | chr1.2:20426134-20426153 | MS.gene026326:CDS | 20.0% |
| !! | TTATGCATGTATATATTACA+GGG | - | chr1.2:20426201-20426220 | MS.gene026326:CDS | 20.0% |
| !! | TTATTGTTCAAAAAACCATA+GGG | - | chr1.2:20424931-20424950 | MS.gene026326:intron | 20.0% |
| !! | TTTATTGTTCAAAAAACCAT+AGG | - | chr1.2:20424930-20424949 | MS.gene026326:intron | 20.0% |
| !!! | AATATATTCCAGATTTTCAT+AGG | - | chr1.2:20427057-20427076 | MS.gene026326:intron | 20.0% |
| !!! | GTGTTGAACAAAAAATATTT+TGG | - | chr1.2:20427296-20427315 | MS.gene026326:intron | 20.0% |
| !!! | TATTCTTTTGAAATCCAATT+AGG | + | chr1.2:20425725-20425744 | None:intergenic | 20.0% |
| !!! | TCTTTCGTTATTATTGTTTT+TGG | - | chr1.2:20426001-20426020 | MS.gene026326:CDS | 20.0% |
| ! | AAATAGTTAATGCCTAAACT+TGG | - | chr1.2:20428006-20428025 | MS.gene026326:intron | 25.0% |
| ! | AAGAGATATCCATATTTGAA+AGG | + | chr1.2:20427376-20427395 | None:intergenic | 25.0% |
| ! | ACCCAGAAAAAATATTGTAT+GGG | - | chr1.2:20428333-20428352 | MS.gene026326:intron | 25.0% |
| ! | ACCTTATTACAACATATAAG+CGG | + | chr1.2:20425628-20425647 | None:intergenic | 25.0% |
| ! | AGAAATATGTGGAGAAATAT+TGG | - | chr1.2:20427233-20427252 | MS.gene026326:intron | 25.0% |
| ! | ATAGTAATTGTGAATGAAAG+TGG | + | chr1.2:20425935-20425954 | None:intergenic | 25.0% |
| ! | ATATTCCTTAAGTTTCCTAA+CGG | - | chr1.2:20427274-20427293 | MS.gene026326:intron | 25.0% |
| ! | ATGACAAGGTTATAAAAAAG+GGG | - | chr1.2:20428592-20428611 | MS.gene026326:CDS | 25.0% |
| ! | ATTGCTTACTACTAAATTAG+TGG | - | chr1.2:20425237-20425256 | MS.gene026326:CDS | 25.0% |
| ! | CATGACAAGGTTATAAAAAA+GGG | - | chr1.2:20428591-20428610 | MS.gene026326:CDS | 25.0% |
| ! | CTCTTAACTTTCAAATTCAT+TGG | - | chr1.2:20427391-20427410 | MS.gene026326:intron | 25.0% |
| ! | GACATTATAACTTCAAAAGA+GGG | + | chr1.2:20428103-20428122 | None:intergenic | 25.0% |
| ! | GCATACATTAAAAAACACAA+TGG | + | chr1.2:20426710-20426729 | None:intergenic | 25.0% |
| ! | GTAAAAATGGCAGATATTAA+GGG | - | chr1.2:20426678-20426697 | MS.gene026326:intron | 25.0% |
| ! | TAAAAGAAGAAACTGAAAAC+TGG | + | chr1.2:20428932-20428951 | None:intergenic | 25.0% |
| ! | TACAGTACCTTATGTAAAAA+TGG | - | chr1.2:20426665-20426684 | MS.gene026326:intron | 25.0% |
| ! | TACCCAGAAAAAATATTGTA+TGG | - | chr1.2:20428332-20428351 | MS.gene026326:intron | 25.0% |
| ! | TAGGAAACTTAAGGAATATA+GGG | + | chr1.2:20427273-20427292 | None:intergenic | 25.0% |
| ! | TATATATCACCTTTAGTACT+TGG | + | chr1.2:20426318-20426337 | None:intergenic | 25.0% |
| ! | TATATGTTGTAATAAGGTTC+AGG | - | chr1.2:20425630-20425649 | MS.gene026326:intron | 25.0% |
| ! | TATTTCTCCACATATTTCTT+TGG | + | chr1.2:20427232-20427251 | None:intergenic | 25.0% |
| ! | TCAATCATATATGTTCATCA+TGG | - | chr1.2:20426105-20426124 | MS.gene026326:CDS | 25.0% |
| ! | TGACATTATAACTTCAAAAG+AGG | + | chr1.2:20428104-20428123 | None:intergenic | 25.0% |
| ! | TGTAAAAATGGCAGATATTA+AGG | - | chr1.2:20426677-20426696 | MS.gene026326:intron | 25.0% |
| ! | TTAACTTTCAAATTCATTGG+TGG | - | chr1.2:20427394-20427413 | MS.gene026326:intron | 25.0% |
| ! | TTAGGAAACTTAAGGAATAT+AGG | + | chr1.2:20427274-20427293 | None:intergenic | 25.0% |
| ! | TTTGATTGCAAAGAAAAATG+TGG | - | chr1.2:20424647-20424666 | MS.gene026326:intron | 25.0% |
| !! | ACTTTATGATGACATAGTTT+TGG | + | chr1.2:20426465-20426484 | None:intergenic | 25.0% |
| !! | GAACACTTGAAAGATTTTAA+TGG | - | chr1.2:20428249-20428268 | MS.gene026326:intron | 25.0% |
| !! | GTAAATTTGAGATGATTCAA+CGG | - | chr1.2:20428409-20428428 | MS.gene026326:intron | 25.0% |
| !!! | AATATCAAATCAGTTGATGA+AGG | - | chr1.2:20427472-20427491 | MS.gene026326:intron | 25.0% |
| !!! | ACCCATACAATATTTTTTCT+GGG | + | chr1.2:20428337-20428356 | None:intergenic | 25.0% |
| !!! | AGTTTTTTTCCAAGTACTAA+AGG | - | chr1.2:20426306-20426325 | MS.gene026326:CDS | 25.0% |
| !!! | ATATCTGCCATTTTTACATA+AGG | + | chr1.2:20426675-20426694 | None:intergenic | 25.0% |
| !!! | ATTTTTACATAAGGTACTGT+AGG | + | chr1.2:20426666-20426685 | None:intergenic | 25.0% |
| !!! | CTTTTTTATCGTGTCATAAA+TGG | - | chr1.2:20426796-20426815 | MS.gene026326:intron | 25.0% |
| !!! | GGTTTTAGTCATTCTAATAT+TGG | - | chr1.2:20426155-20426174 | MS.gene026326:CDS | 25.0% |
| !!! | TATGTTGTTTTAGTTGAGTT+TGG | - | chr1.2:20425592-20425611 | MS.gene026326:CDS | 25.0% |
| !!! | TGAACAAAAAATATTTTGGG+TGG | - | chr1.2:20427300-20427319 | MS.gene026326:intron | 25.0% |
| !!! | TTCATCAACTGATTTGATAT+TGG | + | chr1.2:20427473-20427492 | None:intergenic | 25.0% |
| !!! | TTTTTACATAAGGTACTGTA+GGG | + | chr1.2:20426665-20426684 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTTATCCATGACA+AGG | - | chr1.2:20428578-20428597 | MS.gene026326:CDS | 25.0% |
| AAAAAATATTGTATGGGTGG+TGG | - | chr1.2:20428339-20428358 | MS.gene026326:intron | 30.0% | |
| AAAATAGTGAACTTCCTTCT+AGG | - | chr1.2:20425054-20425073 | MS.gene026326:intron | 30.0% | |
| AAATACCAAAGCAAACTCAA+AGG | - | chr1.2:20427650-20427669 | MS.gene026326:intron | 30.0% | |
| AAATAGTGAACTTCCTTCTA+GGG | - | chr1.2:20425055-20425074 | MS.gene026326:intron | 30.0% | |
| AACGATTAGAAATGTTGATG+AGG | - | chr1.2:20425772-20425791 | MS.gene026326:intron | 30.0% | |
| AAGATGATCCTATGAAAATC+TGG | + | chr1.2:20427068-20427087 | None:intergenic | 30.0% | |
| AATCCAGAAATGATTTAACC+AGG | - | chr1.2:20424604-20424623 | MS.gene026326:intron | 30.0% | |
| ACTTACAAAGAAATAGCCAT+TGG | + | chr1.2:20428137-20428156 | None:intergenic | 30.0% | |
| AGAAAACCTAGTGATTTCTT+TGG | + | chr1.2:20428486-20428505 | None:intergenic | 30.0% | |
| CAGAAAAAATATTGTATGGG+TGG | - | chr1.2:20428336-20428355 | MS.gene026326:intron | 30.0% | |
| CATATACTACACACACAAAT+AGG | - | chr1.2:20426561-20426580 | MS.gene026326:intron | 30.0% | |
| CATGACAGTCAAACATATTT+GGG | + | chr1.2:20425497-20425516 | None:intergenic | 30.0% | |
| CCATGACAAGGTTATAAAAA+AGG | - | chr1.2:20428590-20428609 | MS.gene026326:CDS | 30.0% | |
| GAATGAAACATTCAATGACT+CGG | - | chr1.2:20426522-20426541 | MS.gene026326:intron | 30.0% | |
| GATGCCTATTACTGATAAAT+TGG | - | chr1.2:20425282-20425301 | MS.gene026326:CDS | 30.0% | |
| TAAACCATTACTTGAAACAG+TGG | - | chr1.2:20428205-20428224 | MS.gene026326:intron | 30.0% | |
| TAATGGAACCACAACAATAA+GGG | - | chr1.2:20428266-20428285 | MS.gene026326:intron | 30.0% | |
| TATGTGGAGAAATATTGGAA+AGG | - | chr1.2:20427238-20427257 | MS.gene026326:intron | 30.0% | |
| TCATGACAGTCAAACATATT+TGG | + | chr1.2:20425498-20425517 | None:intergenic | 30.0% | |
| TCCACCAATTTATCAGTAAT+AGG | + | chr1.2:20425289-20425308 | None:intergenic | 30.0% | |
| TGTTCTCTTGAAAACTCATT+TGG | + | chr1.2:20428234-20428253 | None:intergenic | 30.0% | |
| TTAATAACAAGCTGAGATTG+TGG | - | chr1.2:20424806-20424825 | MS.gene026326:intron | 30.0% | |
| TTAATGGAACCACAACAATA+AGG | - | chr1.2:20428265-20428284 | MS.gene026326:intron | 30.0% | |
| TTCTGGATTTCATTCTAACA+GGG | + | chr1.2:20424593-20424612 | None:intergenic | 30.0% | |
| TTGAATTTCTTTGTTGCAGA+GGG | - | chr1.2:20427204-20427223 | MS.gene026326:intron | 30.0% | |
| TTTCTGGATTTCATTCTAAC+AGG | + | chr1.2:20424594-20424613 | None:intergenic | 30.0% | |
| TTTGAATTTCTTTGTTGCAG+AGG | - | chr1.2:20427203-20427222 | MS.gene026326:intron | 30.0% | |
| TTTGCAAAGCCTTTCAAATA+TGG | - | chr1.2:20427364-20427383 | MS.gene026326:intron | 30.0% | |
| ! | AGAGTTATTGAATGGTTTGT+TGG | - | chr1.2:20427789-20427808 | MS.gene026326:intron | 30.0% |
| ! | GGCTCTAATAATAAGAATGA+AGG | - | chr1.2:20424567-20424586 | MS.gene026326:CDS | 30.0% |
| ! | GTTGGAATTTTATGTCTGAA+AGG | - | chr1.2:20427807-20427826 | MS.gene026326:intron | 30.0% |
| ! | TCTAAAGCATAAAAAACCTC+AGG | + | chr1.2:20424906-20424925 | None:intergenic | 30.0% |
| ! | TTCTGAATTTTTCCTTTGTC+TGG | + | chr1.2:20425340-20425359 | None:intergenic | 30.0% |
| !! | CATTGGTGGATCATATTTTA+AGG | - | chr1.2:20427408-20427427 | MS.gene026326:intron | 30.0% |
| !! | CGACGTTAAATTTTGATGAA+TGG | - | chr1.2:20425810-20425829 | MS.gene026326:intron | 30.0% |
| !! | GGTGAAAGATTTTAAGTGTT+AGG | + | chr1.2:20426985-20427004 | None:intergenic | 30.0% |
| !!! | ATTCTCAGGTTGATCTTTTT+TGG | - | chr1.2:20427693-20427712 | MS.gene026326:intron | 30.0% |
| !!! | ATTTTTTGTTCAACACCGTT+AGG | + | chr1.2:20427292-20427311 | None:intergenic | 30.0% |
| !!! | CAACTCTTTTGATTTGTTAG+AGG | - | chr1.2:20425031-20425050 | MS.gene026326:CDS | 30.0% |
| !!! | CAAGTTGTTTTTGAATTGTC+TGG | - | chr1.2:20424753-20424772 | MS.gene026326:intron | 30.0% |
| !!! | CACCCATACAATATTTTTTC+TGG | + | chr1.2:20428338-20428357 | None:intergenic | 30.0% |
| !!! | CCTTTTTTATAACCTTGTCA+TGG | + | chr1.2:20428593-20428612 | None:intergenic | 30.0% |
| !!! | CTTTTAATTTGCCACAAAAG+TGG | + | chr1.2:20426598-20426617 | None:intergenic | 30.0% |
| !!! | GATCTTTTTTGGGTAGATTT+AGG | - | chr1.2:20427704-20427723 | MS.gene026326:intron | 30.0% |
| !!! | TTCTCAGGTTGATCTTTTTT+GGG | - | chr1.2:20427694-20427713 | MS.gene026326:intron | 30.0% |
| !!! | TTTGGCTCAAATCACTTTTT+AGG | + | chr1.2:20426447-20426466 | None:intergenic | 30.0% |
| !!! | TTTTTCTGGTGTTACTACTT+TGG | + | chr1.2:20426838-20426857 | None:intergenic | 30.0% |
| AAGTGATGAATCAAGTGATG+AGG | - | chr1.2:20427567-20427586 | MS.gene026326:intron | 35.0% | |
| AATGGCAAGAGAAAATTCTC+AGG | - | chr1.2:20427679-20427698 | MS.gene026326:intron | 35.0% | |
| ACATGAAAGAGTTGTTGCAA+GGG | - | chr1.2:20425744-20425763 | MS.gene026326:intron | 35.0% | |
| ACTGGACAGTAATAAAGTCT+TGG | - | chr1.2:20426896-20426915 | MS.gene026326:intron | 35.0% | |
| ACTTTATTACTGTCCAGTAC+AGG | + | chr1.2:20426894-20426913 | None:intergenic | 35.0% | |
| ACTTTCTTCACCTTCTTCAA+TGG | + | chr1.2:20427596-20427615 | None:intergenic | 35.0% | |
| AGTTCAAAGGATATGCTCTT+GGG | - | chr1.2:20425110-20425129 | MS.gene026326:intron | 35.0% | |
| ATCCAAACTCGTTCCAAAAA+GGG | - | chr1.2:20425455-20425474 | MS.gene026326:intron | 35.0% | |
| ATGCAAAGAAGCAAATCAAC+TGG | + | chr1.2:20425571-20425590 | None:intergenic | 35.0% | |
| ATTACCAACCCTTATTGTTG+TGG | + | chr1.2:20428277-20428296 | None:intergenic | 35.0% | |
| CATTAACAGCTTCAGATCTT+AGG | + | chr1.2:20428075-20428094 | None:intergenic | 35.0% | |
| CATTATTAGGATCCCAAGTT+TGG | + | chr1.2:20425195-20425214 | None:intergenic | 35.0% | |
| CTTCCTGGTTAAATCATTTC+TGG | + | chr1.2:20424610-20424629 | None:intergenic | 35.0% | |
| GCCGCTTATATGTTGTAATA+AGG | - | chr1.2:20425624-20425643 | MS.gene026326:intron | 35.0% | |
| GCCTATTACTGATAAATTGG+TGG | - | chr1.2:20425285-20425304 | MS.gene026326:CDS | 35.0% | |
| GTTGTAAAGAAGCAAGACAT+TGG | - | chr1.2:20428632-20428651 | MS.gene026326:CDS | 35.0% | |
| TACAAGCACAAACAGAACAA+TGG | - | chr1.2:20426248-20426267 | MS.gene026326:CDS | 35.0% | |
| TACATGAAAGAGTTGTTGCA+AGG | - | chr1.2:20425743-20425762 | MS.gene026326:intron | 35.0% | |
| TACTATTATCCCAGCTACAA+AGG | - | chr1.2:20425949-20425968 | MS.gene026326:intron | 35.0% | |
| TATAAAAAAGGGGTCTCTTG+TGG | - | chr1.2:20428602-20428621 | MS.gene026326:CDS | 35.0% | |
| TCACACTGCATAGCATTATT+AGG | + | chr1.2:20425208-20425227 | None:intergenic | 35.0% | |
| TGAAACAGAGGATACCTAAT+TGG | - | chr1.2:20425708-20425727 | MS.gene026326:intron | 35.0% | |
| TGGAGAGTAATGGTGATATT+TGG | - | chr1.2:20427320-20427339 | MS.gene026326:intron | 35.0% | |
| TGTGTTTATGCATGTACAGA+AGG | - | chr1.2:20429035-20429054 | MS.gene026326:CDS | 35.0% | |
| TGTTCAAAAAACCATAGGGT+AGG | - | chr1.2:20424935-20424954 | MS.gene026326:intron | 35.0% | |
| ! | AATGTGGAGAATAACTTGTC+TGG | - | chr1.2:20424663-20424682 | MS.gene026326:intron | 35.0% |
| ! | AGAGCAATACCCTTTACTTT+TGG | + | chr1.2:20428677-20428696 | None:intergenic | 35.0% |
| ! | GTATCCACTGTTTCAAGTAA+TGG | + | chr1.2:20428212-20428231 | None:intergenic | 35.0% |
| ! | TAAACCATGATCTGAAACAG+AGG | - | chr1.2:20425696-20425715 | MS.gene026326:intron | 35.0% |
| ! | TTGTGAAGAACTAGTGTTGA+AGG | + | chr1.2:20425014-20425033 | None:intergenic | 35.0% |
| !! | ACAAAGCAAATCCACTTTTG+TGG | - | chr1.2:20426584-20426603 | MS.gene026326:intron | 35.0% |
| !! | ATATTTTGGGTGGAGAGTAA+TGG | - | chr1.2:20427310-20427329 | MS.gene026326:intron | 35.0% |
| !! | CAAACTGATATTGACTTGTC+TGG | - | chr1.2:20424723-20424742 | MS.gene026326:intron | 35.0% |
| !! | CAATAAGGGTTGGTAATGAA+AGG | - | chr1.2:20428280-20428299 | MS.gene026326:intron | 35.0% |
| !! | CAATACCCTTTACTTTTGGA+TGG | + | chr1.2:20428673-20428692 | None:intergenic | 35.0% |
| !! | GAATTTTCTCTTGCCATTTC+TGG | + | chr1.2:20427677-20427696 | None:intergenic | 35.0% |
| !! | GCTTTTGATTACACCCTTTT+TGG | + | chr1.2:20425471-20425490 | None:intergenic | 35.0% |
| !! | TTTTCTAGCCTTCTTTACCA+TGG | + | chr1.2:20428050-20428069 | None:intergenic | 35.0% |
| AAATACCTTGAAACTGCTCC+AGG | + | chr1.2:20425982-20426001 | None:intergenic | 40.0% | |
| AACACTTCAGTAACAGTCAC+AGG | + | chr1.2:20425313-20425332 | None:intergenic | 40.0% | |
| AAGACATTGGAGGAACATCT+AGG | - | chr1.2:20428645-20428664 | MS.gene026326:CDS | 40.0% | |
| AGCTAAGGCTTAGAGAAGTA+AGG | + | chr1.2:20427006-20427025 | None:intergenic | 40.0% | |
| AGGAGCCATCCAAAAGTAAA+GGG | - | chr1.2:20428665-20428684 | MS.gene026326:CDS | 40.0% | |
| AGTTAATGCCTAAACTTGGC+AGG | - | chr1.2:20428010-20428029 | MS.gene026326:intron | 40.0% | |
| ATGTCACAATCTTACGCCAA+TGG | - | chr1.2:20428118-20428137 | MS.gene026326:intron | 40.0% | |
| CAAAAAACCATAGGGTAGGA+AGG | - | chr1.2:20424939-20424958 | MS.gene026326:intron | 40.0% | |
| CAAACTCAAAGGACCAGAAA+TGG | - | chr1.2:20427661-20427680 | MS.gene026326:intron | 40.0% | |
| CAACACCGTTAGGAAACTTA+AGG | + | chr1.2:20427282-20427301 | None:intergenic | 40.0% | |
| CAGGAAGAAATACACTGAGA+AGG | - | chr1.2:20424623-20424642 | MS.gene026326:intron | 40.0% | |
| CAGTTCAAAGGATATGCTCT+TGG | - | chr1.2:20425109-20425128 | MS.gene026326:intron | 40.0% | |
| CATCCAAACTCGTTCCAAAA+AGG | - | chr1.2:20425454-20425473 | MS.gene026326:intron | 40.0% | |
| CATTGTGAGCTCATGTGAAA+TGG | - | chr1.2:20426638-20426657 | MS.gene026326:intron | 40.0% | |
| CCAAAGCCAAAGAAATCACT+AGG | - | chr1.2:20428477-20428496 | MS.gene026326:CDS | 40.0% | |
| CTTCTCAGTGTATTTCTTCC+TGG | + | chr1.2:20424625-20424644 | None:intergenic | 40.0% | |
| GAGGGTTCCAAAGAAATATG+TGG | - | chr1.2:20427222-20427241 | MS.gene026326:intron | 40.0% | |
| GAGTAATGAGAGTTCAGATG+AGG | - | chr1.2:20427624-20427643 | MS.gene026326:intron | 40.0% | |
| GTAAAGAAGCAAGACATTGG+AGG | - | chr1.2:20428635-20428654 | MS.gene026326:CDS | 40.0% | |
| GTATCCTCTGTTTCAGATCA+TGG | + | chr1.2:20425703-20425722 | None:intergenic | 40.0% | |
| TAGGAGCCATCCAAAAGTAA+AGG | - | chr1.2:20428664-20428683 | MS.gene026326:CDS | 40.0% | |
| TCCTTCTCCTTCATGATTAC+CGG | + | chr1.2:20424990-20425009 | None:intergenic | 40.0% | |
| TGAATTGTCTGGTAAGACAC+AGG | - | chr1.2:20424764-20424783 | MS.gene026326:intron | 40.0% | |
| TGAGAGTTGTCAACAATGAC+AGG | + | chr1.2:20424861-20424880 | None:intergenic | 40.0% | |
| TGATGCAAATGAAATGCCTG+AGG | - | chr1.2:20424887-20424906 | MS.gene026326:intron | 40.0% | |
| TGTTACTACCTGCCAAGTTT+AGG | + | chr1.2:20428021-20428040 | None:intergenic | 40.0% | |
| TGTTTCACCGGTAATCATGA+AGG | - | chr1.2:20424980-20424999 | MS.gene026326:intron | 40.0% | |
| TTTCTCTACATGACCTGTAC+TGG | - | chr1.2:20426878-20426897 | MS.gene026326:intron | 40.0% | |
| ! | ATGTTGATGAGGACATGACA+TGG | - | chr1.2:20425783-20425802 | MS.gene026326:intron | 40.0% |
| ! | CCTAGTGATTTCTTTGGCTT+TGG | + | chr1.2:20428480-20428499 | None:intergenic | 40.0% |
| ! | GTGACTGTTACTGAAGTGTT+AGG | - | chr1.2:20425313-20425332 | MS.gene026326:CDS | 40.0% |
| ! | TAACTTGTCTGGCAAGAAAC+AGG | - | chr1.2:20424674-20424693 | MS.gene026326:intron | 40.0% |
| ! | TGATGATGTGACTGTTTCAC+CGG | - | chr1.2:20424968-20424987 | MS.gene026326:intron | 40.0% |
| !! | AATATTGTATGGGTGGTGGA+TGG | - | chr1.2:20428343-20428362 | MS.gene026326:intron | 40.0% |
| !! | AGTGAGTGAGTATTGAGCTA+AGG | + | chr1.2:20427021-20427040 | None:intergenic | 40.0% |
| !! | GTGGTGGATGGAAAATATTC+AGG | - | chr1.2:20428355-20428374 | MS.gene026326:intron | 40.0% |
| !! | TAGCTTTAAGCATTGCTCAG+AGG | - | chr1.2:20425366-20425385 | MS.gene026326:CDS | 40.0% |
| !! | TGAAATTTTGCTATGCGAGC+TGG | - | chr1.2:20425836-20425855 | MS.gene026326:intron | 40.0% |
| !! | TGGTGTTACTACTTTGGTGT+TGG | + | chr1.2:20426832-20426851 | None:intergenic | 40.0% |
| !!! | CTTTGGCTTTGGTTCGTTTT+TGG | + | chr1.2:20428469-20428488 | None:intergenic | 40.0% |
| ACCGGTAATCATGAAGGAGA+AGG | - | chr1.2:20424986-20425005 | MS.gene026326:CDS | 45.0% | |
| ACTAGTTCCTTCCTACCCTA+TGG | + | chr1.2:20424949-20424968 | None:intergenic | 45.0% | |
| AGATGACACAGAAACAACCC+TGG | + | chr1.2:20425170-20425189 | None:intergenic | 45.0% | |
| AGGTAGTAACAAAGTGGCCA+TGG | - | chr1.2:20428030-20428049 | MS.gene026326:intron | 45.0% | |
| CAAAGTGGCCATGGTAAAGA+AGG | - | chr1.2:20428039-20428058 | MS.gene026326:intron | 45.0% | |
| CTGGACATGATATGCATGCA+CGG | - | chr1.2:20425138-20425157 | MS.gene026326:intron | 45.0% | |
| CTTGGCAGGTAGTAACAAAG+TGG | - | chr1.2:20428024-20428043 | MS.gene026326:intron | 45.0% | |
| GATGACACAGAAACAACCCT+GGG | + | chr1.2:20425169-20425188 | None:intergenic | 45.0% | |
| GATGAGGAAGCCATTGAAGA+AGG | - | chr1.2:20427583-20427602 | MS.gene026326:intron | 45.0% | |
| GGAACCACAACAATAAGGGT+TGG | - | chr1.2:20428270-20428289 | MS.gene026326:intron | 45.0% | |
| GGCTGTTGCTATCAGTTCAA+AGG | - | chr1.2:20425097-20425116 | MS.gene026326:intron | 45.0% | |
| TACAGAAGGTCGTGATGTGA+AGG | - | chr1.2:20429049-20429068 | MS.gene026326:CDS | 45.0% | |
| TACATACATCACCAGCTTGC+AGG | + | chr1.2:20425889-20425908 | None:intergenic | 45.0% | |
| TGTATGCAGTGTGAGACTGT+TGG | - | chr1.2:20426723-20426742 | MS.gene026326:intron | 45.0% | |
| TGTGTCATCTGGCCAAACTT+GGG | - | chr1.2:20425180-20425199 | MS.gene026326:CDS | 45.0% | |
| TTGTCTGGTAAGACACAGGT+TGG | - | chr1.2:20424768-20424787 | MS.gene026326:intron | 45.0% | |
| ! | CAGGTTGGAATTCATGTGTC+TGG | - | chr1.2:20424783-20424802 | MS.gene026326:intron | 45.0% |
| ! | CTGGTCCTTTGAGTTTGCTT+TGG | + | chr1.2:20427658-20427677 | None:intergenic | 45.0% |
| ! | GAAGGAGCACAAGACATTCA+AGG | - | chr1.2:20429067-20429086 | MS.gene026326:CDS | 45.0% |
| ! | GAAGTGTTAGGACCAGACAA+AGG | - | chr1.2:20425325-20425344 | MS.gene026326:CDS | 45.0% |
| ! | TAGTGAACTTCCTTCTAGGG+AGG | - | chr1.2:20425058-20425077 | MS.gene026326:intron | 45.0% |
| !! | AGGGTTGTTTCTGTGTCATC+TGG | - | chr1.2:20425169-20425188 | MS.gene026326:intron | 45.0% |
| !! | AGTTTGTTGCTTGCCAGACA+AGG | + | chr1.2:20424709-20424728 | None:intergenic | 45.0% |
| !! | ATTTTGCTATGCGAGCTGGT+TGG | - | chr1.2:20425840-20425859 | MS.gene026326:intron | 45.0% |
| !! | CAGGTTGATGATTCCTTGTC+TGG | - | chr1.2:20424693-20424712 | MS.gene026326:intron | 45.0% |
| !! | GGTTGGTAATGAAAGGAGTG+TGG | - | chr1.2:20428287-20428306 | MS.gene026326:intron | 45.0% |
| !!! | CACCCTTTTTGGAACGAGTT+TGG | + | chr1.2:20425460-20425479 | None:intergenic | 45.0% |
| !! | AAAAATAATAAATACTTAAT+TGG | - | chr1.2:20427937-20427956 | MS.gene026326:intron | 5.0% |
| AAGAGTAGCAGCTCTGCAAG+AGG | - | chr1.2:20425398-20425417 | MS.gene026326:CDS | 50.0% | |
| AGCTACAAAGGAACCATGCC+TGG | - | chr1.2:20425961-20425980 | MS.gene026326:intron | 50.0% | |
| AGGCATGGTTCCTTTGTAGC+TGG | + | chr1.2:20425962-20425981 | None:intergenic | 50.0% | |
| CAGGAACATAACCTGCAAGC+TGG | - | chr1.2:20425875-20425894 | MS.gene026326:intron | 50.0% | |
| CTGATAGCAACAGCCATGTC+AGG | + | chr1.2:20425092-20425111 | None:intergenic | 50.0% | |
| CTGTGTCATCTGGCCAAACT+TGG | - | chr1.2:20425179-20425198 | MS.gene026326:CDS | 50.0% | |
| GGAGGCTAAGTTACCTGACA+TGG | - | chr1.2:20425076-20425095 | MS.gene026326:intron | 50.0% | |
| GGCATGGTTCCTTTGTAGCT+GGG | + | chr1.2:20425961-20425980 | None:intergenic | 50.0% | |
| GGTAACTTAGCCTCCCTAGA+AGG | + | chr1.2:20425071-20425090 | None:intergenic | 50.0% | |
| TGGTTGGAAGTCGTTTGTGC+AGG | - | chr1.2:20425856-20425875 | MS.gene026326:intron | 50.0% | |
| ! | GGTGCTGAAGACACAGAAGA+AGG | - | chr1.2:20427493-20427512 | MS.gene026326:intron | 50.0% |
| AGCAGCTCTGCAAGAGGCTA+AGG | - | chr1.2:20425404-20425423 | MS.gene026326:CDS | 55.0% | |
| ATGCATGCACGGTCATTCCC+AGG | - | chr1.2:20425149-20425168 | MS.gene026326:intron | 55.0% | |
| CCATGCCTGGAGCAGTTTCA+AGG | - | chr1.2:20425974-20425993 | MS.gene026326:CDS | 55.0% | |
| CCTTGAAACTGCTCCAGGCA+TGG | + | chr1.2:20425977-20425996 | None:intergenic | 55.0% | |
| GATATGCTCTTGGGTAGCGC+TGG | - | chr1.2:20425119-20425138 | MS.gene026326:intron | 55.0% | |
| GGAGTGTGGAAGTGAGTGTG+AGG | - | chr1.2:20428301-20428320 | MS.gene026326:intron | 55.0% | |
| TGCATGCACGGTCATTCCCA+GGG | - | chr1.2:20425150-20425169 | MS.gene026326:intron | 55.0% | |
| ! | GCAAGAGGCTAAGGCTCTGA+TGG | - | chr1.2:20425413-20425432 | MS.gene026326:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 20424558 | 20429112 | 20424558 | ID=MS.gene026326 |
| chr1.2 | mRNA | 20424558 | 20429112 | 20424558 | ID=MS.gene026326.t1;Parent=MS.gene026326 |
| chr1.2 | exon | 20428885 | 20429112 | 20428885 | ID=MS.gene026326.t1.exon1;Parent=MS.gene026326.t1 |
| chr1.2 | CDS | 20428885 | 20429112 | 20428885 | ID=cds.MS.gene026326.t1;Parent=MS.gene026326.t1 |
| chr1.2 | exon | 20428447 | 20428713 | 20428447 | ID=MS.gene026326.t1.exon2;Parent=MS.gene026326.t1 |
| chr1.2 | CDS | 20428447 | 20428713 | 20428447 | ID=cds.MS.gene026326.t1;Parent=MS.gene026326.t1 |
| chr1.2 | exon | 20425970 | 20426447 | 20425970 | ID=MS.gene026326.t1.exon3;Parent=MS.gene026326.t1 |
| chr1.2 | CDS | 20425970 | 20426447 | 20425970 | ID=cds.MS.gene026326.t1;Parent=MS.gene026326.t1 |
| chr1.2 | exon | 20425520 | 20425638 | 20425520 | ID=MS.gene026326.t1.exon4;Parent=MS.gene026326.t1 |
| chr1.2 | CDS | 20425520 | 20425638 | 20425520 | ID=cds.MS.gene026326.t1;Parent=MS.gene026326.t1 |
| chr1.2 | exon | 20425172 | 20425445 | 20425172 | ID=MS.gene026326.t1.exon5;Parent=MS.gene026326.t1 |
| chr1.2 | CDS | 20425172 | 20425445 | 20425172 | ID=cds.MS.gene026326.t1;Parent=MS.gene026326.t1 |
| chr1.2 | exon | 20424984 | 20425070 | 20424984 | ID=MS.gene026326.t1.exon6;Parent=MS.gene026326.t1 |
| chr1.2 | CDS | 20424984 | 20425070 | 20424984 | ID=cds.MS.gene026326.t1;Parent=MS.gene026326.t1 |
| chr1.2 | exon | 20424558 | 20424616 | 20424558 | ID=MS.gene026326.t1.exon7;Parent=MS.gene026326.t1 |
| chr1.2 | CDS | 20424558 | 20424616 | 20424558 | ID=cds.MS.gene026326.t1;Parent=MS.gene026326.t1 |
| Gene Sequence |
| Protein sequence |
