Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84060.t1 | KEH26464.1 | 74.5 | 447 | 98 | 5 | 1 | 440 | 33 | 470 | 1.10E-180 | 642.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84060.t1 | Q8L3W1 | 21.5 | 317 | 214 | 8 | 2 | 288 | 22 | 333 | 1.5e-08 | 62.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84060.t1 | A0A072U9K2 | 74.5 | 447 | 98 | 5 | 1 | 440 | 33 | 470 | 7.9e-181 | 642.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene84060.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84060.t1 | MTR_6g061070 | 75.839 | 447 | 92 | 5 | 1 | 440 | 33 | 470 | 0.0 | 672 |
| MS.gene84060.t1 | MTR_1g035520 | 58.333 | 300 | 112 | 6 | 1 | 290 | 87 | 383 | 2.77e-103 | 312 |
| MS.gene84060.t1 | MTR_1g035520 | 85.276 | 163 | 24 | 0 | 278 | 440 | 221 | 383 | 1.08e-93 | 288 |
| MS.gene84060.t1 | MTR_1g035480 | 63.522 | 159 | 37 | 2 | 1 | 159 | 32 | 169 | 6.37e-63 | 201 |
| MS.gene84060.t1 | MTR_1g033740 | 64.151 | 159 | 38 | 2 | 1 | 159 | 37 | 176 | 6.72e-63 | 202 |
| MS.gene84060.t1 | MTR_1g035620 | 35.666 | 443 | 221 | 13 | 2 | 439 | 25 | 408 | 1.53e-62 | 208 |
| MS.gene84060.t1 | MTR_1g035500 | 61.006 | 159 | 44 | 2 | 1 | 159 | 40 | 180 | 2.90e-61 | 197 |
| MS.gene84060.t1 | MTR_1g035570 | 32.823 | 457 | 206 | 14 | 2 | 440 | 21 | 394 | 9.59e-61 | 203 |
| MS.gene84060.t1 | MTR_1g035510 | 56.395 | 172 | 55 | 2 | 1 | 172 | 1 | 152 | 7.63e-58 | 190 |
| MS.gene84060.t1 | MTR_1g035640 | 34.238 | 479 | 240 | 20 | 2 | 440 | 21 | 464 | 3.49e-56 | 192 |
| MS.gene84060.t1 | MTR_1g035470 | 60.510 | 157 | 38 | 3 | 1 | 157 | 1 | 133 | 3.04e-53 | 175 |
| MS.gene84060.t1 | MTR_1g050845 | 30.807 | 409 | 208 | 11 | 2 | 405 | 25 | 363 | 3.48e-42 | 159 |
| MS.gene84060.t1 | MTR_1g035490 | 38.976 | 254 | 131 | 11 | 189 | 440 | 97 | 328 | 1.48e-40 | 147 |
| MS.gene84060.t1 | MTR_5g044670 | 29.907 | 321 | 193 | 10 | 1 | 313 | 31 | 327 | 2.43e-36 | 136 |
| MS.gene84060.t1 | MTR_3g098790 | 31.229 | 301 | 172 | 10 | 1 | 293 | 28 | 301 | 2.29e-30 | 120 |
| MS.gene84060.t1 | MTR_7g050710 | 29.431 | 299 | 186 | 6 | 2 | 293 | 29 | 309 | 5.96e-29 | 116 |
| MS.gene84060.t1 | MTR_1g108780 | 24.783 | 460 | 308 | 13 | 2 | 439 | 13 | 456 | 1.78e-27 | 114 |
| MS.gene84060.t1 | MTR_7g050720 | 30.719 | 306 | 176 | 10 | 1 | 290 | 25 | 310 | 5.77e-27 | 110 |
| MS.gene84060.t1 | MTR_7g050580 | 29.097 | 299 | 172 | 9 | 1 | 293 | 28 | 292 | 1.16e-26 | 109 |
| MS.gene84060.t1 | MTR_7g050590 | 28.428 | 299 | 191 | 6 | 1 | 293 | 1 | 282 | 1.20e-26 | 109 |
| MS.gene84060.t1 | MTR_1g035650 | 34.762 | 210 | 97 | 7 | 2 | 205 | 25 | 200 | 1.42e-25 | 103 |
| MS.gene84060.t1 | MTR_1g035540 | 41.830 | 153 | 38 | 4 | 214 | 366 | 2 | 103 | 2.44e-25 | 100 |
| MS.gene84060.t1 | MTR_3g061310 | 30.333 | 300 | 158 | 13 | 2 | 290 | 26 | 285 | 1.96e-24 | 102 |
| MS.gene84060.t1 | MTR_3g061350 | 31.313 | 297 | 156 | 15 | 2 | 289 | 26 | 283 | 2.75e-24 | 102 |
| MS.gene84060.t1 | MTR_8g103940 | 24.078 | 461 | 305 | 16 | 2 | 439 | 55 | 493 | 3.77e-24 | 105 |
| MS.gene84060.t1 | MTR_7g050560 | 28.000 | 300 | 174 | 8 | 1 | 293 | 28 | 292 | 1.04e-23 | 101 |
| MS.gene84060.t1 | MTR_4g119990 | 26.045 | 311 | 202 | 10 | 2 | 302 | 31 | 323 | 2.56e-23 | 101 |
| MS.gene84060.t1 | MTR_1g035460 | 26.415 | 318 | 202 | 9 | 1 | 304 | 1 | 300 | 1.23e-22 | 99.8 |
| MS.gene84060.t1 | MTR_3g061370 | 28.328 | 293 | 170 | 12 | 2 | 289 | 23 | 280 | 4.27e-21 | 93.2 |
| MS.gene84060.t1 | MTR_3g061340 | 27.000 | 300 | 157 | 13 | 2 | 290 | 26 | 274 | 2.36e-18 | 85.1 |
| MS.gene84060.t1 | MTR_3g061320 | 26.962 | 293 | 171 | 12 | 2 | 290 | 26 | 279 | 1.05e-17 | 83.6 |
| MS.gene84060.t1 | MTR_1g021330 | 23.871 | 310 | 197 | 10 | 2 | 277 | 42 | 346 | 1.54e-16 | 81.3 |
| MS.gene84060.t1 | MTR_1g021360 | 25.436 | 287 | 175 | 13 | 2 | 277 | 198 | 456 | 2.84e-14 | 75.1 |
| MS.gene84060.t1 | MTR_3g061330 | 30.698 | 215 | 114 | 11 | 2 | 212 | 26 | 209 | 3.72e-14 | 72.4 |
| MS.gene84060.t1 | MTR_3g061290 | 36.364 | 121 | 67 | 4 | 2 | 119 | 26 | 139 | 1.25e-13 | 70.1 |
| MS.gene84060.t1 | MTR_3g061220 | 38.000 | 100 | 48 | 2 | 2 | 99 | 26 | 113 | 3.12e-13 | 66.6 |
| MS.gene84060.t1 | MTR_1g021440 | 23.794 | 311 | 199 | 13 | 2 | 277 | 38 | 345 | 5.61e-12 | 67.4 |
| MS.gene84060.t1 | MTR_1g021350 | 22.039 | 304 | 200 | 9 | 2 | 288 | 37 | 320 | 1.22e-11 | 66.2 |
| MS.gene84060.t1 | MTR_1g021400 | 21.356 | 295 | 211 | 8 | 2 | 277 | 46 | 338 | 1.54e-11 | 65.9 |
| MS.gene84060.t1 | MTR_1g035440 | 40.476 | 84 | 46 | 2 | 2 | 81 | 31 | 114 | 4.82e-11 | 63.2 |
| MS.gene84060.t1 | MTR_7g050640 | 43.590 | 78 | 41 | 2 | 1 | 75 | 28 | 105 | 7.32e-11 | 59.7 |
| MS.gene84060.t1 | MTR_3g005495 | 38.554 | 83 | 48 | 2 | 2 | 81 | 259 | 341 | 9.17e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 80 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGACCCATTTGGAAGTTTA+AGG | 0.139491 | 1.3:+32872696 | None:intergenic |
| ATGGAATATGCGGGCAATTT+TGG | 0.164513 | 1.3:-32869643 | MS.gene84060:CDS |
| GAATTTGCATGAGATGTTTA+AGG | 0.198949 | 1.3:-32869469 | MS.gene84060:CDS |
| TTTGGAAGTTTAAGGGATAT+TGG | 0.281020 | 1.3:+32872704 | None:intergenic |
| TGCAACGCGGTGATGGTATT+TGG | 0.284893 | 1.3:-32872655 | MS.gene84060:CDS |
| AGTTTAAGGGATATTGGATT+TGG | 0.337634 | 1.3:+32872710 | None:intergenic |
| CTCCGGGCCTGGTTCCTTTG+TGG | 0.344484 | 1.3:+32871211 | None:intergenic |
| GGAATTTCGTAGAGAGGTAT+TGG | 0.365580 | 1.3:-32872742 | MS.gene84060:CDS |
| TTATCACCTTCAACATGATA+TGG | 0.368518 | 1.3:+32871874 | None:intergenic |
| TTTGCATGGTCGCTCCGATA+TGG | 0.373070 | 1.3:-32872614 | MS.gene84060:CDS |
| AAGAAGCATGGTATATTTAG+TGG | 0.374789 | 1.3:-32869313 | MS.gene84060:CDS |
| GGCCTGGTTCCTTTGTGGTT+GGG | 0.379936 | 1.3:+32871216 | None:intergenic |
| AATCTGACCCTCCTTTGTAT+TGG | 0.385935 | 1.3:+32872576 | None:intergenic |
| ATGGTATTTGGCTTCAGAAT+TGG | 0.387348 | 1.3:-32872643 | MS.gene84060:CDS |
| TATAATGAACATCTCGACTA+TGG | 0.388378 | 1.3:-32869238 | MS.gene84060:CDS |
| GGGCCTGGTTCCTTTGTGGT+TGG | 0.394485 | 1.3:+32871215 | None:intergenic |
| GGTCAGCATGCAAAATGAAT+TGG | 0.396575 | 1.3:-32872679 | MS.gene84060:CDS |
| TGACCCATTTGGAAGTTTAA+GGG | 0.399923 | 1.3:+32872697 | None:intergenic |
| CCTTGAAACTTCTCCGGGCC+TGG | 0.411612 | 1.3:+32871200 | None:intergenic |
| GACAACACCAGTAAAAGATA+TGG | 0.416359 | 1.3:-32869662 | MS.gene84060:CDS |
| AACCACAAAGGAACCAGGCC+CGG | 0.431169 | 1.3:-32871213 | MS.gene84060:CDS |
| ATTCAGTGGAGTTGAGAGTA+GGG | 0.448522 | 1.3:-32869288 | MS.gene84060:CDS |
| ATATCCCTTAAACTTCCAAA+TGG | 0.449227 | 1.3:-32872701 | MS.gene84060:CDS |
| TGGAGACACTTGCTTGTTTG+AGG | 0.451137 | 1.3:-32869164 | MS.gene84060:CDS |
| TTAGAAGTGTTGGTGAGGAC+AGG | 0.455257 | 1.3:-32871397 | MS.gene84060:CDS |
| GCAATACCTTGAAACTTCTC+CGG | 0.461040 | 1.3:+32871194 | None:intergenic |
| TGCTTCTTCAACAGCTCACT+TGG | 0.461685 | 1.3:+32869328 | None:intergenic |
| AAACTAAAAGATCTCCATAT+CGG | 0.467666 | 1.3:+32872600 | None:intergenic |
| ATAGTAATTGTGAATGAAAG+TGG | 0.468831 | 1.3:+32871242 | None:intergenic |
| GACTATGGTTGGTTCACTAA+AGG | 0.474605 | 1.3:-32869223 | MS.gene84060:CDS |
| TACCTCTCTACGAAATTCCT+TGG | 0.476007 | 1.3:+32872746 | None:intergenic |
| AAGGAACATGAGTTGAAAGT+TGG | 0.478819 | 1.3:-32871299 | MS.gene84060:CDS |
| TGAGAGTAGGGGAAGGAACA+TGG | 0.483751 | 1.3:-32869276 | MS.gene84060:CDS |
| TTATCGCCATATCATGTTGA+AGG | 0.488274 | 1.3:-32871880 | MS.gene84060:CDS |
| AGTGAAACTAGGACTCTCAT+TGG | 0.512039 | 1.3:+32871909 | None:intergenic |
| AGTAGCAATGCCATTTGAGT+TGG | 0.513443 | 1.3:+32872373 | None:intergenic |
| TTCGAAAACCAACTAGGTAT+CGG | 0.513588 | 1.3:+32871458 | None:intergenic |
| AGAGATTGCAAAGTAAAGAC+TGG | 0.515563 | 1.3:-32869184 | MS.gene84060:CDS |
| AATTCAGTGGAGTTGAGAGT+AGG | 0.518002 | 1.3:-32869289 | MS.gene84060:CDS |
| TAATGGAAACACAGGAGGCA+TGG | 0.520474 | 1.3:-32871989 | MS.gene84060:CDS |
| TGTTGAAGGTGATAATAGAT+TGG | 0.520882 | 1.3:-32871866 | MS.gene84060:intron |
| TATCCCTTAAACTTCCAAAT+GGG | 0.521322 | 1.3:-32872700 | MS.gene84060:CDS |
| TGTGCAAAATCATGTGTTCA+AGG | 0.521657 | 1.3:-32869134 | MS.gene84060:CDS |
| TATTCTTTCGAAAACCAACT+AGG | 0.522446 | 1.3:+32871452 | None:intergenic |
| CCAGGCCCGGAGAAGTTTCA+AGG | 0.523708 | 1.3:-32871200 | MS.gene84060:intron |
| CAATACCTTGAAACTTCTCC+GGG | 0.525380 | 1.3:+32871195 | None:intergenic |
| TTCAGTGGAGTTGAGAGTAG+GGG | 0.529294 | 1.3:-32869287 | MS.gene84060:CDS |
| TGAAACAGCCGATACCTAGT+TGG | 0.537742 | 1.3:-32871466 | MS.gene84060:intron |
| AAGGCAACAATTAGAAGTGT+TGG | 0.542696 | 1.3:-32871407 | MS.gene84060:CDS |
| AATGGAAACACAGGAGGCAT+GGG | 0.543418 | 1.3:-32871988 | MS.gene84060:CDS |
| TACATGAATGAGTTATTGCA+AGG | 0.543984 | 1.3:-32871431 | MS.gene84060:CDS |
| ATGAACATCTCGACTATGGT+TGG | 0.544359 | 1.3:-32869234 | MS.gene84060:CDS |
| GTCAGCATGCAAAATGAATT+GGG | 0.544595 | 1.3:-32872678 | MS.gene84060:CDS |
| GTGAAACTAGGACTCTCATT+GGG | 0.547777 | 1.3:+32871910 | None:intergenic |
| TATATTTAGTGGAAATTCAG+TGG | 0.549056 | 1.3:-32869302 | MS.gene84060:CDS |
| ACTACTGCTGCTACACCTCA+AGG | 0.557213 | 1.3:-32872353 | MS.gene84060:CDS |
| ATCCCAACCACAAAGGAACC+AGG | 0.559337 | 1.3:-32871218 | MS.gene84060:CDS |
| TAGAAGTGTTGGTGAGGACA+GGG | 0.562489 | 1.3:-32871396 | MS.gene84060:CDS |
| TTTGGCTTCAGAATTGGAAG+AGG | 0.566576 | 1.3:-32872637 | MS.gene84060:CDS |
| GATAATTTGACAGTGAAACT+AGG | 0.566923 | 1.3:+32871898 | None:intergenic |
| GTAAAAGATATGGAATATGC+GGG | 0.570556 | 1.3:-32869652 | MS.gene84060:CDS |
| AGAATTGGAAGAGGTTTGCA+TGG | 0.571811 | 1.3:-32872628 | MS.gene84060:CDS |
| ATGGTTGGTTCACTAAAGGT+TGG | 0.573713 | 1.3:-32869219 | MS.gene84060:CDS |
| TTGTGAATGTTAGTCCCTTG+AGG | 0.580089 | 1.3:+32872338 | None:intergenic |
| AATTGGGTGCAACGCGGTGA+TGG | 0.587564 | 1.3:-32872662 | MS.gene84060:CDS |
| TGTGCTTGCAGATGATTCCA+AGG | 0.587783 | 1.3:-32872763 | None:intergenic |
| GCAGAGGCTAATGGAAACAC+AGG | 0.596384 | 1.3:-32871997 | MS.gene84060:intron |
| AACAATTAGAAGTGTTGGTG+AGG | 0.601806 | 1.3:-32871402 | MS.gene84060:CDS |
| AGTAAAAGATATGGAATATG+CGG | 0.604042 | 1.3:-32869653 | MS.gene84060:CDS |
| TTCCAAGGAATTTCGTAGAG+AGG | 0.604264 | 1.3:-32872748 | MS.gene84060:CDS |
| AGTGAGCTGTTGAAGAAGCA+TGG | 0.617628 | 1.3:-32869325 | MS.gene84060:CDS |
| TACTATTATCCCAACCACAA+AGG | 0.624953 | 1.3:-32871225 | MS.gene84060:CDS |
| GTGTTGGTGAGGACAGGGCA+TGG | 0.626789 | 1.3:-32871391 | MS.gene84060:CDS |
| GAATGAGTTATTGCAAGGGA+AGG | 0.643476 | 1.3:-32871426 | MS.gene84060:CDS |
| GTGGAGTTGAGAGTAGGGGA+AGG | 0.647557 | 1.3:-32869283 | MS.gene84060:CDS |
| CTACTGCTGCTACACCTCAA+GGG | 0.654975 | 1.3:-32872352 | MS.gene84060:CDS |
| ACATGAATGAGTTATTGCAA+GGG | 0.661417 | 1.3:-32871430 | MS.gene84060:CDS |
| GAGGCTAATGGAAACACAGG+AGG | 0.702704 | 1.3:-32871994 | MS.gene84060:CDS |
| TGGACATGTGCAGAAAACCA+AGG | 0.707757 | 1.3:-32869703 | MS.gene84060:intron |
| AAAATGAATTGGGTGCAACG+CGG | 0.811094 | 1.3:-32872668 | MS.gene84060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAGATGAATAAATAAA+AGG | + | chr1.3:32869617-32869636 | None:intergenic | 10.0% |
| !! | TGTTTGTAATAAATTAATTA+AGG | + | chr1.3:32871381-32871400 | None:intergenic | 10.0% |
| !! | TTATTTATTCATCTATTTAT+GGG | - | chr1.3:32869618-32869637 | MS.gene84060:CDS | 10.0% |
| !! | TTTATTTATTCATCTATTTA+TGG | - | chr1.3:32869617-32869636 | MS.gene84060:CDS | 10.0% |
| !!! | TAAAATATACAAATTTTTCA+AGG | - | chr1.3:32871946-32871965 | MS.gene84060:CDS | 10.0% |
| !!! | ATATTTTAAGGTTTAAATCT+TGG | - | chr1.3:32870824-32870843 | MS.gene84060:intron | 15.0% |
| !!! | CAAATGTGTAAAATATTTTA+AGG | - | chr1.3:32870812-32870831 | MS.gene84060:intron | 15.0% |
| !!! | CTAAGATTAATTTTTATACA+TGG | - | chr1.3:32872005-32872024 | MS.gene84060:intron | 15.0% |
| !!! | CTATTTTATTTTACAGTTAT+TGG | + | chr1.3:32871763-32871782 | None:intergenic | 15.0% |
| !! | AAAGAAAACAACATAGTTTA+AGG | + | chr1.3:32872353-32872372 | None:intergenic | 20.0% |
| !! | AAGAATATACGTAAATAAAG+TGG | + | chr1.3:32869755-32869774 | None:intergenic | 20.0% |
| !! | AGAATATACGTAAATAAAGT+GGG | + | chr1.3:32869754-32869773 | None:intergenic | 20.0% |
| !! | TATTAAAAAGAGAGTCATTT+GGG | + | chr1.3:32870140-32870159 | None:intergenic | 20.0% |
| !! | TTAAGATTACTAGATCAAAA+AGG | - | chr1.3:32870886-32870905 | MS.gene84060:intron | 20.0% |
| !!! | AATTTGTATGGATTAAAAAG+TGG | + | chr1.3:32869704-32869723 | None:intergenic | 20.0% |
| !!! | ATGTACTTATGTAATTTGTA+TGG | + | chr1.3:32869716-32869735 | None:intergenic | 20.0% |
| !!! | GAGAAAGAAGTTTATTTTAA+TGG | + | chr1.3:32871355-32871374 | None:intergenic | 20.0% |
| !!! | GATTTTAGTCATTCTAATAA+TGG | - | chr1.3:32871870-32871889 | MS.gene84060:CDS | 20.0% |
| ! | AAACTAAAAGATCTCCATAT+CGG | + | chr1.3:32869275-32869294 | None:intergenic | 25.0% |
| ! | AATAGAAAAAATGACTGATG+TGG | - | chr1.3:32871778-32871797 | MS.gene84060:intron | 25.0% |
| ! | ACTAACAGAAAACATATTCA+TGG | - | chr1.3:32870178-32870197 | MS.gene84060:intron | 25.0% |
| ! | AGTAAAAGATATGGAATATG+CGG | - | chr1.3:32872219-32872238 | MS.gene84060:intron | 25.0% |
| ! | ATAGTAATTGTGAATGAAAG+TGG | + | chr1.3:32870633-32870652 | None:intergenic | 25.0% |
| ! | ATGTTAATGTTACTGTCATT+AGG | - | chr1.3:32870975-32870994 | MS.gene84060:intron | 25.0% |
| ! | ATTAAAAAGAGAGTCATTTG+GGG | + | chr1.3:32870139-32870158 | None:intergenic | 25.0% |
| ! | CTATTAAAAAGAGAGTCATT+TGG | + | chr1.3:32870141-32870160 | None:intergenic | 25.0% |
| ! | GAGATATGAAAATCCAAAAA+AGG | + | chr1.3:32871325-32871344 | None:intergenic | 25.0% |
| ! | TATATTTAGTGGAAATTCAG+TGG | - | chr1.3:32872570-32872589 | MS.gene84060:CDS | 25.0% |
| ! | TATTACAGAAAAAGTAGTAC+AGG | + | chr1.3:32870039-32870058 | None:intergenic | 25.0% |
| ! | TGTTAATGTTACTGTCATTA+GGG | - | chr1.3:32870976-32870995 | MS.gene84060:intron | 25.0% |
| ! | TTAAACACACTATCATCTAT+TGG | + | chr1.3:32871805-32871824 | None:intergenic | 25.0% |
| ! | TTTGTTCATATATATGCAGT+TGG | - | chr1.3:32872513-32872532 | MS.gene84060:CDS | 25.0% |
| !! | AATAGATGATAGTGTGTTTA+AGG | - | chr1.3:32871804-32871823 | MS.gene84060:intron | 25.0% |
| !! | ATAGATGATAGTGTGTTTAA+GGG | - | chr1.3:32871805-32871824 | MS.gene84060:intron | 25.0% |
| !! | CAAAATTTGAGATGAACTAA+GGG | + | chr1.3:32869665-32869684 | None:intergenic | 25.0% |
| !! | TTTGATTGATTGTAGTTTGT+TGG | + | chr1.3:32870796-32870815 | None:intergenic | 25.0% |
| !! | TTTTATAACATCATCAGACA+AGG | - | chr1.3:32872427-32872446 | MS.gene84060:CDS | 25.0% |
| !!! | ATTGTCATGTTTACCTTTTT+TGG | - | chr1.3:32871309-32871328 | MS.gene84060:CDS | 25.0% |
| !!! | CTTTTAGTTTTCCAATACAA+AGG | - | chr1.3:32869285-32869304 | MS.gene84060:CDS | 25.0% |
| AAAAAGAGAACCAACTCAAA+TGG | - | chr1.3:32869489-32869508 | MS.gene84060:intron | 30.0% | |
| AAACAACACTAATAAGTGGA+CGG | + | chr1.3:32871168-32871187 | None:intergenic | 30.0% | |
| AACGCAATAAAATAGAGCTT+AGG | + | chr1.3:32870943-32870962 | None:intergenic | 30.0% | |
| ACAAATACTTGTTCAACGAT+CGG | - | chr1.3:32871043-32871062 | MS.gene84060:intron | 30.0% | |
| ACACAAACAACACTAATAAG+TGG | + | chr1.3:32871172-32871191 | None:intergenic | 30.0% | |
| ACATGAATGAGTTATTGCAA+GGG | - | chr1.3:32870442-32870461 | MS.gene84060:intron | 30.0% | |
| ACGCAATAAAATAGAGCTTA+GGG | + | chr1.3:32870942-32870961 | None:intergenic | 30.0% | |
| AGTTTAAGGGATATTGGATT+TGG | + | chr1.3:32869165-32869184 | None:intergenic | 30.0% | |
| ATATCCCTTAAACTTCCAAA+TGG | - | chr1.3:32869171-32869190 | MS.gene84060:CDS | 30.0% | |
| CTAAAAGTGATATATCTGCA+AGG | - | chr1.3:32872036-32872055 | MS.gene84060:intron | 30.0% | |
| GAATTTGCATGAGATGTTTA+AGG | - | chr1.3:32872403-32872422 | MS.gene84060:CDS | 30.0% | |
| GATAATTTGACAGTGAAACT+AGG | + | chr1.3:32869977-32869996 | None:intergenic | 30.0% | |
| GTAAAAGATATGGAATATGC+GGG | - | chr1.3:32872220-32872239 | MS.gene84060:intron | 30.0% | |
| TACATGAATGAGTTATTGCA+AGG | - | chr1.3:32870441-32870460 | MS.gene84060:intron | 30.0% | |
| TATAATGAACATCTCGACTA+TGG | - | chr1.3:32872634-32872653 | MS.gene84060:CDS | 30.0% | |
| TATCCCTTAAACTTCCAAAT+GGG | - | chr1.3:32869172-32869191 | MS.gene84060:CDS | 30.0% | |
| TATTCTTTCGAAAACCAACT+AGG | + | chr1.3:32870423-32870442 | None:intergenic | 30.0% | |
| TCAATACATTCAGTTCCTAT+AGG | + | chr1.3:32870102-32870121 | None:intergenic | 30.0% | |
| TGTTGAAGGTGATAATAGAT+TGG | - | chr1.3:32870006-32870025 | MS.gene84060:intron | 30.0% | |
| TTATCACCTTCAACATGATA+TGG | + | chr1.3:32870001-32870020 | None:intergenic | 30.0% | |
| TTGAAGATCAGAATAACTAG+CGG | - | chr1.3:32870270-32870289 | MS.gene84060:intron | 30.0% | |
| TTTGGAAGTTTAAGGGATAT+TGG | + | chr1.3:32869171-32869190 | None:intergenic | 30.0% | |
| ! | AACTCTTTTCAGCATTTGAA+AGG | + | chr1.3:32869844-32869863 | None:intergenic | 30.0% |
| ! | AAGAAGCATGGTATATTTAG+TGG | - | chr1.3:32872559-32872578 | MS.gene84060:CDS | 30.0% |
| ! | CCAAAATTTGAGATGAACTA+AGG | + | chr1.3:32869666-32869685 | None:intergenic | 30.0% |
| ! | CCTTAGTTCATCTCAAATTT+TGG | - | chr1.3:32869663-32869682 | MS.gene84060:CDS | 30.0% |
| ! | CGTTGAACAAGTATTTGTTA+CGG | + | chr1.3:32871041-32871060 | None:intergenic | 30.0% |
| ! | GCATATTCCATATCTTTTAC+TGG | + | chr1.3:32872220-32872239 | None:intergenic | 30.0% |
| ! | TAAGCTCTATTTTATTGCGT+TGG | - | chr1.3:32870942-32870961 | MS.gene84060:intron | 30.0% |
| ! | TAGTTTTCCAATACAAAGGA+GGG | - | chr1.3:32869289-32869308 | MS.gene84060:CDS | 30.0% |
| !! | ATTTTGGAGATGGAATTTCA+AGG | - | chr1.3:32872245-32872264 | MS.gene84060:intron | 30.0% |
| !! | CACAAAAACACATGGTTTTA+GGG | - | chr1.3:32872273-32872292 | MS.gene84060:intron | 30.0% |
| !! | TTAGTTTTCCAATACAAAGG+AGG | - | chr1.3:32869288-32869307 | MS.gene84060:CDS | 30.0% |
| !! | TTTGTATTTTCAGTGTCACT+AGG | + | chr1.3:32869456-32869475 | None:intergenic | 30.0% |
| !!! | ACAAAAACACATGGTTTTAG+GGG | - | chr1.3:32872274-32872293 | MS.gene84060:intron | 30.0% |
| !!! | GAGTTTTTAAAGTTTTGCAG+AGG | - | chr1.3:32869859-32869878 | MS.gene84060:intron | 30.0% |
| AACAACACTAATAAGTGGAC+GGG | + | chr1.3:32871167-32871186 | None:intergenic | 35.0% | |
| ACATACATTGAACAGTGTGT+AGG | + | chr1.3:32871256-32871275 | None:intergenic | 35.0% | |
| AGAGAGAAGAAACAAGAACA+GGG | - | chr1.3:32871433-32871452 | MS.gene84060:CDS | 35.0% | |
| AGAGATTGCAAAGTAAAGAC+TGG | - | chr1.3:32872688-32872707 | MS.gene84060:CDS | 35.0% | |
| CAAATCAGTTTCACATGGTT+TGG | - | chr1.3:32871095-32871114 | MS.gene84060:intron | 35.0% | |
| CACACACATAGCTATATACA+TGG | + | chr1.3:32872477-32872496 | None:intergenic | 35.0% | |
| CGCAATAAAATAGAGCTTAG+GGG | + | chr1.3:32870941-32870960 | None:intergenic | 35.0% | |
| GACAACACCAGTAAAAGATA+TGG | - | chr1.3:32872210-32872229 | MS.gene84060:intron | 35.0% | |
| GCAATAAAATAGAGCTTAGG+GGG | + | chr1.3:32870940-32870959 | None:intergenic | 35.0% | |
| GTCAGCATGCAAAATGAATT+GGG | - | chr1.3:32869194-32869213 | MS.gene84060:CDS | 35.0% | |
| TACTATTATCCCAACCACAA+AGG | - | chr1.3:32870647-32870666 | MS.gene84060:intron | 35.0% | |
| TGACCCATTTGGAAGTTTAA+GGG | + | chr1.3:32869178-32869197 | None:intergenic | 35.0% | |
| TGAGACAAATCAGTTTCACA+TGG | - | chr1.3:32871090-32871109 | MS.gene84060:intron | 35.0% | |
| TGTGCAAAATCATGTGTTCA+AGG | - | chr1.3:32872738-32872757 | MS.gene84060:CDS | 35.0% | |
| TTATCGCCATATCATGTTGA+AGG | - | chr1.3:32869992-32870011 | MS.gene84060:intron | 35.0% | |
| TTCGAAAACCAACTAGGTAT+CGG | + | chr1.3:32870417-32870436 | None:intergenic | 35.0% | |
| ! | AAGGAACATGAGTTGAAAGT+TGG | - | chr1.3:32870573-32870592 | MS.gene84060:intron | 35.0% |
| ! | AAGGCAACAATTAGAAGTGT+TGG | - | chr1.3:32870465-32870484 | MS.gene84060:intron | 35.0% |
| ! | AGAGGCTTTCATTTTCCTAT+AGG | - | chr1.3:32870084-32870103 | MS.gene84060:intron | 35.0% |
| ! | AGTATTTGTTACGGTTACGT+CGG | + | chr1.3:32871032-32871051 | None:intergenic | 35.0% |
| ! | ATGGTATTTGGCTTCAGAAT+TGG | - | chr1.3:32869229-32869248 | MS.gene84060:CDS | 35.0% |
| ! | CAAGAGCAGTTTTCTAATGA+GGG | - | chr1.3:32870530-32870549 | MS.gene84060:intron | 35.0% |
| ! | GCACAAAAACACATGGTTTT+AGG | - | chr1.3:32872272-32872291 | MS.gene84060:intron | 35.0% |
| ! | GTGTTGTCTCTGATTTTTCT+TGG | + | chr1.3:32872198-32872217 | None:intergenic | 35.0% |
| ! | TAAAGTTTTGCAGAGGCTAA+TGG | - | chr1.3:32869866-32869885 | MS.gene84060:intron | 35.0% |
| !! | AACAATTAGAAGTGTTGGTG+AGG | - | chr1.3:32870470-32870489 | MS.gene84060:intron | 35.0% |
| !! | ACGAGGTTTTATGACAGTAA+GGG | + | chr1.3:32871696-32871715 | None:intergenic | 35.0% |
| !! | AGGTTGGAAGTCATTTTCAA+AGG | - | chr1.3:32870554-32870573 | MS.gene84060:intron | 35.0% |
| !! | AGTTGGTTCTCTTTTTCTTG+AGG | + | chr1.3:32869485-32869504 | None:intergenic | 35.0% |
| AAAATGAATTGGGTGCAACG+CGG | - | chr1.3:32869204-32869223 | MS.gene84060:CDS | 40.0% | |
| AACCTCGTGATGAAGGATAA+TGG | - | chr1.3:32871708-32871727 | MS.gene84060:intron | 40.0% | |
| AACTAGCGGAAGAGACATTT+AGG | - | chr1.3:32870284-32870303 | MS.gene84060:intron | 40.0% | |
| AATCTGACCCTCCTTTGTAT+TGG | + | chr1.3:32869299-32869318 | None:intergenic | 40.0% | |
| AATTCAGTGGAGTTGAGAGT+AGG | - | chr1.3:32872583-32872602 | MS.gene84060:CDS | 40.0% | |
| ACATGTCCACAAACTTCTCA+GGG | + | chr1.3:32872158-32872177 | None:intergenic | 40.0% | |
| AGAATTGGAAGAGGTTTGCA+TGG | - | chr1.3:32869244-32869263 | MS.gene84060:CDS | 40.0% | |
| AGGGATCTACTGAAGAAGTT+GGG | + | chr1.3:32872139-32872158 | None:intergenic | 40.0% | |
| AGTGAAACTAGGACTCTCAT+TGG | + | chr1.3:32869966-32869985 | None:intergenic | 40.0% | |
| ATGAACATCTCGACTATGGT+TGG | - | chr1.3:32872638-32872657 | MS.gene84060:CDS | 40.0% | |
| ATGTATGTGTGCCATCAAAC+AGG | - | chr1.3:32871268-32871287 | MS.gene84060:CDS | 40.0% | |
| ATTCAGTGGAGTTGAGAGTA+GGG | - | chr1.3:32872584-32872603 | MS.gene84060:CDS | 40.0% | |
| ATTCATGCACGAAATGTGCA+AGG | + | chr1.3:32870355-32870374 | None:intergenic | 40.0% | |
| CAATACCTTGAAACTTCTCC+GGG | + | chr1.3:32870680-32870699 | None:intergenic | 40.0% | |
| CAGAGAGAAGAAACAAGAAC+AGG | - | chr1.3:32871432-32871451 | MS.gene84060:CDS | 40.0% | |
| CTGACCCATTTGGAAGTTTA+AGG | + | chr1.3:32869179-32869198 | None:intergenic | 40.0% | |
| GAATGAGTTATTGCAAGGGA+AGG | - | chr1.3:32870446-32870465 | MS.gene84060:intron | 40.0% | |
| GAGATGAGAGATATACAGAG+AGG | - | chr1.3:32871474-32871493 | MS.gene84060:intron | 40.0% | |
| GCAATACCTTGAAACTTCTC+CGG | + | chr1.3:32870681-32870700 | None:intergenic | 40.0% | |
| GGTCAGCATGCAAAATGAAT+TGG | - | chr1.3:32869193-32869212 | MS.gene84060:CDS | 40.0% | |
| GTCATAAAACCTCGTGATGA+AGG | - | chr1.3:32871701-32871720 | MS.gene84060:intron | 40.0% | |
| GTGAAACTAGGACTCTCATT+GGG | + | chr1.3:32869965-32869984 | None:intergenic | 40.0% | |
| GTTGTGGGTAGTGTAAATTG+TGG | - | chr1.3:32871734-32871753 | MS.gene84060:intron | 40.0% | |
| TACCTCTCTACGAAATTCCT+TGG | + | chr1.3:32869129-32869148 | None:intergenic | 40.0% | |
| TGCAACCCAGCAAAAAGTTT+CGG | - | chr1.3:32869575-32869594 | MS.gene84060:intron | 40.0% | |
| TGTATGTGTGCCATCAAACA+GGG | - | chr1.3:32871269-32871288 | MS.gene84060:CDS | 40.0% | |
| TTCCAAGGAATTTCGTAGAG+AGG | - | chr1.3:32869124-32869143 | MS.gene84060:CDS | 40.0% | |
| TTCTTTGGTGAGCAGTTGTT+GGG | - | chr1.3:32871639-32871658 | MS.gene84060:intron | 40.0% | |
| TTGTGAATGTTAGTCCCTTG+AGG | + | chr1.3:32869537-32869556 | None:intergenic | 40.0% | |
| ! | ACTTACCCGAAACTTTTTGC+TGG | + | chr1.3:32869584-32869603 | None:intergenic | 40.0% |
| ! | AGTAGCAATGCCATTTGAGT+TGG | + | chr1.3:32869502-32869521 | None:intergenic | 40.0% |
| ! | ATGGAATATGCGGGCAATTT+TGG | - | chr1.3:32872229-32872248 | MS.gene84060:intron | 40.0% |
| ! | ATGGTTGGTTCACTAAAGGT+TGG | - | chr1.3:32872653-32872672 | MS.gene84060:CDS | 40.0% |
| ! | ATTTTGCATGCTGACCCATT+TGG | + | chr1.3:32869189-32869208 | None:intergenic | 40.0% |
| ! | CAGTTTCACATGGTTTGGAA+CGG | - | chr1.3:32871100-32871119 | MS.gene84060:intron | 40.0% |
| ! | CTGATTTTTCTTGGACTCCT+TGG | + | chr1.3:32872189-32872208 | None:intergenic | 40.0% |
| ! | CTGTTCTTGTTTCTTCTCTC+TGG | + | chr1.3:32871434-32871453 | None:intergenic | 40.0% |
| ! | CTTACCCGAAACTTTTTGCT+GGG | + | chr1.3:32869583-32869602 | None:intergenic | 40.0% |
| ! | GACTATGGTTGGTTCACTAA+AGG | - | chr1.3:32872649-32872668 | MS.gene84060:CDS | 40.0% |
| ! | GCAAGAGCAGTTTTCTAATG+AGG | - | chr1.3:32870529-32870548 | MS.gene84060:intron | 40.0% |
| ! | GGAATTTCGTAGAGAGGTAT+TGG | - | chr1.3:32869130-32869149 | MS.gene84060:CDS | 40.0% |
| ! | GGTTCACGTTTTCTGATCTA+CGG | - | chr1.3:32871613-32871632 | MS.gene84060:intron | 40.0% |
| ! | GTTCACGTTTTCTGATCTAC+GGG | - | chr1.3:32871614-32871633 | MS.gene84060:intron | 40.0% |
| ! | TCGTGATGAAGGATAATGGT+GGG | - | chr1.3:32871712-32871731 | MS.gene84060:intron | 40.0% |
| ! | TTGTTTCTTCTCTCTGGTAG+TGG | + | chr1.3:32871428-32871447 | None:intergenic | 40.0% |
| ! | TTTGGCTTCAGAATTGGAAG+AGG | - | chr1.3:32869235-32869254 | MS.gene84060:CDS | 40.0% |
| !! | CACGAGGTTTTATGACAGTA+AGG | + | chr1.3:32871697-32871716 | None:intergenic | 40.0% |
| !! | CGAGGTTTTATGACAGTAAG+GGG | + | chr1.3:32871695-32871714 | None:intergenic | 40.0% |
| AAACTGACGTTGAAACGGTC+GGG | - | chr1.3:32871587-32871606 | MS.gene84060:intron | 45.0% | |
| AGGAGCTGCACAAAAACACA+TGG | - | chr1.3:32872265-32872284 | MS.gene84060:intron | 45.0% | |
| AGTGAGCTGTTGAAGAAGCA+TGG | - | chr1.3:32872547-32872566 | MS.gene84060:CDS | 45.0% | |
| CACATGTCCACAAACTTCTC+AGG | + | chr1.3:32872159-32872178 | None:intergenic | 45.0% | |
| CACCATTATCCTTCATCACG+AGG | + | chr1.3:32871713-32871732 | None:intergenic | 45.0% | |
| CAGGGATCTACTGAAGAAGT+TGG | + | chr1.3:32872140-32872159 | None:intergenic | 45.0% | |
| CGAAAGCGGTTCTGTCAAAA+TGG | - | chr1.3:32871124-32871143 | MS.gene84060:intron | 45.0% | |
| GAAACTGACGTTGAAACGGT+CGG | - | chr1.3:32871586-32871605 | MS.gene84060:intron | 45.0% | |
| GACCGTTTCAACGTCAGTTT+CGG | + | chr1.3:32871587-32871606 | None:intergenic | 45.0% | |
| GCAACCCAGCAAAAAGTTTC+GGG | - | chr1.3:32869576-32869595 | MS.gene84060:intron | 45.0% | |
| GGGATCTACTGAAGAAGTTG+GGG | + | chr1.3:32872138-32872157 | None:intergenic | 45.0% | |
| GTAGATCCCTGAGAAGTTTG+TGG | - | chr1.3:32872149-32872168 | MS.gene84060:intron | 45.0% | |
| GTTACGGTTACGTCGGATTT+CGG | + | chr1.3:32871025-32871044 | None:intergenic | 45.0% | |
| GTTCAACGATCGGATGTGTA+CGG | - | chr1.3:32871053-32871072 | MS.gene84060:intron | 45.0% | |
| GTTCTTTGGTGAGCAGTTGT+TGG | - | chr1.3:32871638-32871657 | MS.gene84060:intron | 45.0% | |
| TAATGGAAACACAGGAGGCA+TGG | - | chr1.3:32869883-32869902 | MS.gene84060:intron | 45.0% | |
| TCAAGACACACCCTGTTTGA+TGG | + | chr1.3:32871282-32871301 | None:intergenic | 45.0% | |
| TCTGATCTACGGGTGTTCTT+TGG | - | chr1.3:32871624-32871643 | MS.gene84060:intron | 45.0% | |
| TGAAACAGCCGATACCTAGT+TGG | - | chr1.3:32870406-32870425 | MS.gene84060:intron | 45.0% | |
| TGAAAGCCTCTCACACAGTT+AGG | + | chr1.3:32870075-32870094 | None:intergenic | 45.0% | |
| TGCTTCTTCAACAGCTCACT+TGG | + | chr1.3:32872547-32872566 | None:intergenic | 45.0% | |
| TGGACATGTGCAGAAAACCA+AGG | - | chr1.3:32872169-32872188 | MS.gene84060:intron | 45.0% | |
| TGGAGACACTTGCTTGTTTG+AGG | - | chr1.3:32872708-32872727 | MS.gene84060:CDS | 45.0% | |
| TTCAACGATCGGATGTGTAC+GGG | - | chr1.3:32871054-32871073 | MS.gene84060:intron | 45.0% | |
| TTCAGTGGAGTTGAGAGTAG+GGG | - | chr1.3:32872585-32872604 | MS.gene84060:CDS | 45.0% | |
| TTCGTACCTAACTGTGTGAG+AGG | - | chr1.3:32870066-32870085 | MS.gene84060:intron | 45.0% | |
| ! | AATGGAAACACAGGAGGCAT+GGG | - | chr1.3:32869884-32869903 | MS.gene84060:intron | 45.0% |
| ! | AGCAGTTTTCTAATGAGGGC+AGG | - | chr1.3:32870534-32870553 | MS.gene84060:intron | 45.0% |
| ! | CTCGTGATGAAGGATAATGG+TGG | - | chr1.3:32871711-32871730 | MS.gene84060:intron | 45.0% |
| ! | GTTTTCTAATGAGGGCAGGT+TGG | - | chr1.3:32870538-32870557 | MS.gene84060:intron | 45.0% |
| ! | TGACGGGTCTAACGGAATAA+CGG | + | chr1.3:32871560-32871579 | None:intergenic | 45.0% |
| !! | AACTAGGTATCGGCTGTTTC+AGG | + | chr1.3:32870407-32870426 | None:intergenic | 45.0% |
| !! | GAAGGATAATGGTGGGTTGT+GGG | - | chr1.3:32871719-32871738 | MS.gene84060:intron | 45.0% |
| !! | TAGAAGTGTTGGTGAGGACA+GGG | - | chr1.3:32870476-32870495 | MS.gene84060:intron | 45.0% |
| !! | TATGCGGGCAATTTTGGAGA+TGG | - | chr1.3:32872235-32872254 | MS.gene84060:intron | 45.0% |
| !! | TGAAGGATAATGGTGGGTTG+TGG | - | chr1.3:32871718-32871737 | MS.gene84060:intron | 45.0% |
| !! | TTAGAAGTGTTGGTGAGGAC+AGG | - | chr1.3:32870475-32870494 | MS.gene84060:intron | 45.0% |
| !! | TTCTTCTCTCTGGTAGTGGT+GGG | + | chr1.3:32871424-32871443 | None:intergenic | 45.0% |
| !! | TTTCTTCTCTCTGGTAGTGG+TGG | + | chr1.3:32871425-32871444 | None:intergenic | 45.0% |
| ACTACTGCTGCTACACCTCA+AGG | - | chr1.3:32869519-32869538 | MS.gene84060:intron | 50.0% | |
| ATCCCAACCACAAAGGAACC+AGG | - | chr1.3:32870654-32870673 | MS.gene84060:intron | 50.0% | |
| CGCCGAAACTGACGTTGAAA+CGG | - | chr1.3:32871582-32871601 | MS.gene84060:intron | 50.0% | |
| CGTTTCAACGTCAGTTTCGG+CGG | + | chr1.3:32871584-32871603 | None:intergenic | 50.0% | |
| CTACTGCTGCTACACCTCAA+GGG | - | chr1.3:32869520-32869539 | MS.gene84060:intron | 50.0% | |
| GACGGGTCTAACGGAATAAC+GGG | + | chr1.3:32871559-32871578 | None:intergenic | 50.0% | |
| GAGGCTAATGGAAACACAGG+AGG | - | chr1.3:32869878-32869897 | MS.gene84060:intron | 50.0% | |
| GCAGAGGCTAATGGAAACAC+AGG | - | chr1.3:32869875-32869894 | MS.gene84060:intron | 50.0% | |
| GTGTGTAGAGTGTGTGTTCG+TGG | - | chr1.3:32871829-32871848 | MS.gene84060:intron | 50.0% | |
| GTTTCAACGTCAGTTTCGGC+GGG | + | chr1.3:32871583-32871602 | None:intergenic | 50.0% | |
| TGAGAGTAGGGGAAGGAACA+TGG | - | chr1.3:32872596-32872615 | MS.gene84060:CDS | 50.0% | |
| TTTGCATGGTCGCTCCGATA+TGG | - | chr1.3:32869258-32869277 | MS.gene84060:CDS | 50.0% | |
| ! | TGCAACGCGGTGATGGTATT+TGG | - | chr1.3:32869217-32869236 | MS.gene84060:CDS | 50.0% |
| ! | TGGTTTGGAACGGACGAAAG+CGG | - | chr1.3:32871110-32871129 | MS.gene84060:intron | 50.0% |
| !! | GGTCTAACGGAATAACGGGT+GGG | + | chr1.3:32871555-32871574 | None:intergenic | 50.0% |
| !! | GTATCGGCTGTTTCAGGTCA+TGG | + | chr1.3:32870401-32870420 | None:intergenic | 50.0% |
| AACCACAAAGGAACCAGGCC+CGG | - | chr1.3:32870659-32870678 | MS.gene84060:intron | 55.0% | |
| AATTGGGTGCAACGCGGTGA+TGG | - | chr1.3:32869210-32869229 | MS.gene84060:CDS | 55.0% | |
| CGGTTACGTCGGATTTCGGT+CGG | + | chr1.3:32871021-32871040 | None:intergenic | 55.0% | |
| GACGTTGAAACGGTCGGGAA+TGG | - | chr1.3:32871592-32871611 | MS.gene84060:intron | 55.0% | |
| GGCCTGGTTCCTTTGTGGTT+GGG | + | chr1.3:32870659-32870678 | None:intergenic | 55.0% | |
| GTGGAGTTGAGAGTAGGGGA+AGG | - | chr1.3:32872589-32872608 | MS.gene84060:CDS | 55.0% | |
| TACAACCGAGCCAAACCACC+TGG | - | chr1.3:32871529-32871548 | MS.gene84060:intron | 55.0% | |
| ! | GGGTCTAACGGAATAACGGG+TGG | + | chr1.3:32871556-32871575 | None:intergenic | 55.0% |
| ACGTCAGTTTCGGCGGGTGA+CGG | + | chr1.3:32871577-32871596 | None:intergenic | 60.0% | |
| CCAGGCCCGGAGAAGTTTCA+AGG | - | chr1.3:32870672-32870691 | MS.gene84060:intron | 60.0% | |
| CCTTGAAACTTCTCCGGGCC+TGG | + | chr1.3:32870675-32870694 | None:intergenic | 60.0% | |
| GGGCCTGGTTCCTTTGTGGT+TGG | + | chr1.3:32870660-32870679 | None:intergenic | 60.0% | |
| TGACAGTAAGGGGCGAGCAC+CGG | + | chr1.3:32871685-32871704 | None:intergenic | 60.0% | |
| ! | GTGTTGGTGAGGACAGGGCA+TGG | - | chr1.3:32870481-32870500 | MS.gene84060:intron | 60.0% |
| !! | AACGGAATAACGGGTGGGCC+AGG | + | chr1.3:32871550-32871569 | None:intergenic | 60.0% |
| AACGGGTGGGCCAGGTGGTT+TGG | + | chr1.3:32871542-32871561 | None:intergenic | 65.0% | |
| CGAATCCGCCCGTAACCGAC+CGG | - | chr1.3:32871663-32871682 | MS.gene84060:intron | 65.0% | |
| CGTCAGTTTCGGCGGGTGAC+GGG | + | chr1.3:32871576-32871595 | None:intergenic | 65.0% | |
| CTCCGGGCCTGGTTCCTTTG+TGG | + | chr1.3:32870664-32870683 | None:intergenic | 65.0% | |
| TCTCACACTTCACGCGCGCG+TGG | + | chr1.3:32871206-32871225 | None:intergenic | 65.0% | |
| ! | CGGTCGGTTACGGGCGGATT+CGG | + | chr1.3:32871665-32871684 | None:intergenic | 65.0% |
| ! | GTGGGCCAGGTGGTTTGGCT+CGG | + | chr1.3:32871537-32871556 | None:intergenic | 65.0% |
| !! | AGTAAGGGGCGAGCACCGGT+CGG | + | chr1.3:32871681-32871700 | None:intergenic | 65.0% |
| !! | GGAATAACGGGTGGGCCAGG+TGG | + | chr1.3:32871547-32871566 | None:intergenic | 65.0% |
| !! | TCGGCGGGTGACGGGTCTAA+CGG | + | chr1.3:32871568-32871587 | None:intergenic | 65.0% |
| !! | GAGCACCGGTCGGTTACGGG+CGG | + | chr1.3:32871671-32871690 | None:intergenic | 70.0% |
| !! | GGCGAGCACCGGTCGGTTAC+GGG | + | chr1.3:32871674-32871693 | None:intergenic | 70.0% |
| !! | GGGCGAGCACCGGTCGGTTA+CGG | + | chr1.3:32871675-32871694 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 32869120 | 32872774 | 32869120 | ID=MS.gene84060 |
| chr1.3 | mRNA | 32869120 | 32872774 | 32869120 | ID=MS.gene84060.t1;Parent=MS.gene84060 |
| chr1.3 | exon | 32872297 | 32872774 | 32872297 | ID=MS.gene84060.t1.exon1;Parent=MS.gene84060.t1 |
| chr1.3 | CDS | 32872297 | 32872774 | 32872297 | ID=cds.MS.gene84060.t1;Parent=MS.gene84060.t1 |
| chr1.3 | exon | 32871867 | 32872015 | 32871867 | ID=MS.gene84060.t1.exon2;Parent=MS.gene84060.t1 |
| chr1.3 | CDS | 32871867 | 32872015 | 32871867 | ID=cds.MS.gene84060.t1;Parent=MS.gene84060.t1 |
| chr1.3 | exon | 32871201 | 32871480 | 32871201 | ID=MS.gene84060.t1.exon3;Parent=MS.gene84060.t1 |
| chr1.3 | CDS | 32871201 | 32871480 | 32871201 | ID=cds.MS.gene84060.t1;Parent=MS.gene84060.t1 |
| chr1.3 | exon | 32869599 | 32869712 | 32869599 | ID=MS.gene84060.t1.exon4;Parent=MS.gene84060.t1 |
| chr1.3 | CDS | 32869599 | 32869712 | 32869599 | ID=cds.MS.gene84060.t1;Parent=MS.gene84060.t1 |
| chr1.3 | exon | 32869446 | 32869504 | 32869446 | ID=MS.gene84060.t1.exon5;Parent=MS.gene84060.t1 |
| chr1.3 | CDS | 32869446 | 32869504 | 32869446 | ID=cds.MS.gene84060.t1;Parent=MS.gene84060.t1 |
| chr1.3 | exon | 32869120 | 32869362 | 32869120 | ID=MS.gene84060.t1.exon6;Parent=MS.gene84060.t1 |
| chr1.3 | CDS | 32869120 | 32869362 | 32869120 | ID=cds.MS.gene84060.t1;Parent=MS.gene84060.t1 |
| Gene Sequence |
| Protein sequence |
