Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073646.t1 | KEH40808.1 | 69.7 | 511 | 63 | 4 | 1 | 465 | 1 | 465 | 1.80E-141 | 512.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073646.t1 | Q8L3W1 | 26.0 | 281 | 147 | 8 | 7 | 226 | 4 | 284 | 4.2e-14 | 80.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073646.t1 | A0A072VHA4 | 69.7 | 511 | 63 | 4 | 1 | 465 | 1 | 465 | 1.3e-141 | 512.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073646.t1 | MTR_1g035640 | 68.069 | 523 | 51 | 6 | 1 | 465 | 1 | 465 | 0.0 | 654 |
| MS.gene073646.t1 | MTR_1g035570 | 55.431 | 267 | 89 | 3 | 1 | 249 | 1 | 255 | 2.57e-91 | 283 |
| MS.gene073646.t1 | MTR_1g035570 | 72.368 | 76 | 21 | 0 | 390 | 465 | 320 | 395 | 4.50e-28 | 115 |
| MS.gene073646.t1 | MTR_1g035620 | 39.286 | 476 | 208 | 19 | 1 | 463 | 1 | 408 | 8.67e-89 | 277 |
| MS.gene073646.t1 | MTR_1g050845 | 39.229 | 441 | 181 | 16 | 1 | 431 | 1 | 364 | 6.76e-70 | 238 |
| MS.gene073646.t1 | MTR_1g035650 | 48.325 | 209 | 94 | 4 | 1 | 201 | 1 | 203 | 2.99e-52 | 175 |
| MS.gene073646.t1 | MTR_6g061070 | 32.179 | 491 | 246 | 18 | 14 | 464 | 27 | 470 | 3.81e-52 | 183 |
| MS.gene073646.t1 | MTR_1g035490 | 35.207 | 338 | 158 | 9 | 129 | 465 | 52 | 329 | 3.91e-51 | 176 |
| MS.gene073646.t1 | MTR_8g103940 | 26.369 | 493 | 287 | 19 | 9 | 463 | 39 | 493 | 1.75e-31 | 126 |
| MS.gene073646.t1 | MTR_1g035480 | 43.506 | 154 | 76 | 4 | 14 | 167 | 26 | 168 | 1.04e-28 | 112 |
| MS.gene073646.t1 | MTR_5g044670 | 30.502 | 259 | 157 | 8 | 9 | 248 | 16 | 270 | 4.31e-28 | 114 |
| MS.gene073646.t1 | MTR_1g033740 | 40.714 | 140 | 75 | 3 | 14 | 146 | 31 | 169 | 4.83e-28 | 110 |
| MS.gene073646.t1 | MTR_1g108780 | 25.207 | 484 | 283 | 19 | 20 | 463 | 12 | 456 | 8.55e-27 | 112 |
| MS.gene073646.t1 | MTR_1g035510 | 52.809 | 89 | 41 | 1 | 21 | 109 | 2 | 89 | 5.41e-26 | 105 |
| MS.gene073646.t1 | MTR_1g035500 | 38.776 | 147 | 81 | 3 | 14 | 153 | 34 | 178 | 5.92e-24 | 99.0 |
| MS.gene073646.t1 | MTR_7g050710 | 32.627 | 236 | 115 | 7 | 8 | 213 | 12 | 233 | 9.24e-24 | 102 |
| MS.gene073646.t1 | MTR_3g061310 | 30.702 | 228 | 142 | 6 | 9 | 227 | 12 | 232 | 1.65e-23 | 100 |
| MS.gene073646.t1 | MTR_3g061320 | 32.287 | 223 | 139 | 5 | 9 | 227 | 12 | 226 | 2.32e-23 | 99.8 |
| MS.gene073646.t1 | MTR_3g061330 | 30.645 | 248 | 149 | 8 | 9 | 242 | 12 | 250 | 4.61e-23 | 98.2 |
| MS.gene073646.t1 | MTR_1g035470 | 49.438 | 89 | 44 | 1 | 21 | 109 | 2 | 89 | 1.11e-22 | 94.0 |
| MS.gene073646.t1 | MTR_7g050560 | 33.594 | 256 | 145 | 10 | 9 | 249 | 13 | 258 | 1.39e-22 | 98.2 |
| MS.gene073646.t1 | MTR_1g035520 | 29.582 | 311 | 153 | 14 | 5 | 269 | 76 | 366 | 2.15e-22 | 99.0 |
| MS.gene073646.t1 | MTR_1g035520 | 49.180 | 61 | 31 | 0 | 404 | 464 | 323 | 383 | 7.86e-11 | 63.9 |
| MS.gene073646.t1 | MTR_3g061350 | 32.850 | 207 | 120 | 6 | 9 | 204 | 12 | 210 | 3.47e-22 | 96.7 |
| MS.gene073646.t1 | MTR_6g043890 | 28.740 | 254 | 163 | 7 | 13 | 250 | 23 | 274 | 4.78e-22 | 97.4 |
| MS.gene073646.t1 | MTR_7g050720 | 35.135 | 185 | 105 | 6 | 1 | 178 | 1 | 177 | 9.85e-22 | 95.9 |
| MS.gene073646.t1 | MTR_3g061290 | 41.463 | 123 | 67 | 3 | 9 | 126 | 12 | 134 | 1.22e-21 | 93.2 |
| MS.gene073646.t1 | MTR_3g061370 | 32.850 | 207 | 120 | 7 | 9 | 204 | 9 | 207 | 2.57e-19 | 88.2 |
| MS.gene073646.t1 | MTR_3g098790 | 33.766 | 231 | 121 | 10 | 9 | 217 | 13 | 233 | 7.14e-19 | 87.8 |
| MS.gene073646.t1 | MTR_4g119990 | 28.244 | 262 | 159 | 10 | 9 | 242 | 15 | 275 | 2.32e-18 | 87.0 |
| MS.gene073646.t1 | MTR_3g061340 | 27.068 | 266 | 154 | 11 | 9 | 256 | 12 | 255 | 2.82e-18 | 85.1 |
| MS.gene073646.t1 | MTR_7g050590 | 31.280 | 211 | 120 | 7 | 21 | 214 | 2 | 204 | 3.29e-18 | 85.5 |
| MS.gene073646.t1 | MTR_1g035460 | 28.000 | 225 | 131 | 7 | 21 | 214 | 2 | 226 | 1.11e-16 | 82.0 |
| MS.gene073646.t1 | MTR_7g050580 | 44.444 | 99 | 49 | 2 | 9 | 101 | 13 | 111 | 5.84e-16 | 79.0 |
| MS.gene073646.t1 | MTR_3g061220 | 35.043 | 117 | 63 | 3 | 9 | 123 | 12 | 117 | 6.65e-14 | 68.6 |
| MS.gene073646.t1 | MTR_7g050640 | 45.098 | 102 | 48 | 3 | 3 | 96 | 5 | 106 | 9.57e-14 | 68.2 |
| MS.gene073646.t1 | MTR_4g068320 | 36.634 | 101 | 58 | 2 | 7 | 101 | 4 | 104 | 1.01e-12 | 70.1 |
| MS.gene073646.t1 | MTR_1g035440 | 35.000 | 100 | 58 | 3 | 9 | 101 | 15 | 114 | 4.41e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073646.t1 | AT3G18990 | 25.887 | 282 | 146 | 8 | 7 | 226 | 4 | 284 | 2.67e-17 | 84.0 |
| MS.gene073646.t1 | AT3G18990 | 25.887 | 282 | 146 | 8 | 7 | 226 | 4 | 284 | 2.95e-17 | 83.2 |
Find 83 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTTCAACAAGAAATATTT+TGG | 0.149501 | 1.1:-35176946 | MS.gene073646:CDS |
| TAAAGGTTGGATAAAATTTA+TGG | 0.171908 | 1.1:-35173042 | MS.gene073646:CDS |
| TATTTCAAGGTTAAGATATT+TGG | 0.184615 | 1.1:-35176821 | MS.gene073646:CDS |
| TTTGGAAATTTAAGAAATAT+TGG | 0.199105 | 1.1:+35176971 | None:intergenic |
| AAAGAAGGGATTCTCATTAT+TGG | 0.209323 | 1.1:+35176391 | None:intergenic |
| TTTGCAAAGTCTCTCAAATA+TGG | 0.220809 | 1.1:-35176878 | MS.gene073646:CDS |
| CCTTGAAGAGCTTGCACTTT+TGG | 0.221116 | 1.1:+35175431 | None:intergenic |
| CCCTGAAGAGCATGCACTTT+TGG | 0.222036 | 1.1:+35175241 | None:intergenic |
| TCCAAAAGTGCATGCTCTTC+AGG | 0.235087 | 1.1:-35175242 | MS.gene073646:CDS |
| TGGAGAATAATGGCGATATT+TGG | 0.251676 | 1.1:-35176922 | MS.gene073646:CDS |
| GCATGCACCAAAGAGATTTA+TGG | 0.255225 | 1.1:-35173165 | MS.gene073646:CDS |
| AGAAATATGTGGAGAAATAT+TGG | 0.283749 | 1.1:-35177009 | MS.gene073646:CDS |
| CCTCTTTCCATAAATCTCTT+TGG | 0.284821 | 1.1:+35173158 | None:intergenic |
| CAATATTATCTTATGAAAAT+CGG | 0.286878 | 1.1:+35177163 | None:intergenic |
| CTCTGTAGATCATGCAGTTT+TGG | 0.291583 | 1.1:+35174018 | None:intergenic |
| GAAGAAAGCAAAGTGGAAAT+TGG | 0.294808 | 1.1:-35173020 | MS.gene073646:CDS |
| ATATTTCTCCACATATTTCT+TGG | 0.307927 | 1.1:+35177012 | None:intergenic |
| ATTTCTTGTTGAACACCATT+TGG | 0.331479 | 1.1:+35176953 | None:intergenic |
| TTGGAAATTTAAGAAATATT+GGG | 0.332062 | 1.1:+35176972 | None:intergenic |
| GTTATCATTTGAGCTTCCTT+TGG | 0.355140 | 1.1:+35176689 | None:intergenic |
| TATAAAGAAGGGATCTCTTC+TGG | 0.374152 | 1.1:-35175855 | MS.gene073646:CDS |
| TATTTCTCCACATATTTCTT+GGG | 0.381095 | 1.1:+35177013 | None:intergenic |
| TATAAAGAAGGGATCTCTTA+TGG | 0.386855 | 1.1:-35175506 | MS.gene073646:CDS |
| CCAAAAGTGCAAGCTCTTCA+AGG | 0.388417 | 1.1:-35175431 | MS.gene073646:intron |
| TTTGGTATTTCACTCTCATC+AGG | 0.395950 | 1.1:+35176707 | None:intergenic |
| AATATTATCTTATGAAAATC+GGG | 0.396040 | 1.1:+35177164 | None:intergenic |
| GAAGCTCAAATGATAACAAA+TGG | 0.398449 | 1.1:-35176683 | MS.gene073646:CDS |
| TGTCATTAAAACTTCAAAGA+AGG | 0.419675 | 1.1:+35176376 | None:intergenic |
| AAAATTGTGGAGTTGAAAAT+GGG | 0.422112 | 1.1:-35173125 | MS.gene073646:CDS |
| GTGTTTAAAGTTTCCATTGT+GGG | 0.433176 | 1.1:-35172957 | MS.gene073646:CDS |
| CCAAAAGTGCATGCTCTTCA+GGG | 0.454566 | 1.1:-35175241 | MS.gene073646:intron |
| TATTGGTGGATCATATTTCA+AGG | 0.456312 | 1.1:-35176834 | MS.gene073646:CDS |
| CGTGGTTGTCAGTTCAGTAA+AGG | 0.468915 | 1.1:-35173059 | MS.gene073646:CDS |
| AACTGACAACCACGAATACT+AGG | 0.474382 | 1.1:+35173068 | None:intergenic |
| ATTTATTATCCTAGTATTCG+TGG | 0.474870 | 1.1:-35173077 | MS.gene073646:CDS |
| GTCATTAAAACTTCAAAGAA+GGG | 0.479979 | 1.1:+35176377 | None:intergenic |
| CCGTGACAAGGTTATAAAGA+AGG | 0.482547 | 1.1:-35175328 | MS.gene073646:intron |
| TTACGCCCATGGTCATATCT+TGG | 0.485636 | 1.1:-35176348 | MS.gene073646:intron |
| CCATGACAAGGTTATAAAGA+AGG | 0.491612 | 1.1:-35175518 | MS.gene073646:intron |
| CCATGACAAGGTTATAAAGA+AGG | 0.491612 | 1.1:-35175867 | MS.gene073646:intron |
| TCTTCTAGTTCTATGACTAC+TGG | 0.492100 | 1.1:-35176125 | MS.gene073646:intron |
| ATATTTCTTAAATTTCCAAA+TGG | 0.500935 | 1.1:-35176968 | MS.gene073646:CDS |
| CCATGACAAGGTTATAAAGA+AGG | 0.510696 | 1.1:-35174831 | MS.gene073646:intron |
| CCAAAGAGATTTATGGAAAG+AGG | 0.511759 | 1.1:-35173158 | MS.gene073646:CDS |
| AAGCTCAAATGATAACAAAT+GGG | 0.514121 | 1.1:-35176682 | MS.gene073646:CDS |
| AAGACATTGGAGAAACTTGT+AGG | 0.516345 | 1.1:-35175270 | MS.gene073646:CDS |
| AAGACATTGGAGAAACATCT+AGG | 0.517707 | 1.1:-35174773 | MS.gene073646:CDS |
| TCATACTTGAACAAATTTGA+AGG | 0.519341 | 1.1:-35176215 | MS.gene073646:CDS |
| CATACTTGAACAAATTTGAA+GGG | 0.523429 | 1.1:-35176214 | MS.gene073646:CDS |
| AAGACGCTAGAGAAACTTGT+AGG | 0.526317 | 1.1:-35175460 | MS.gene073646:CDS |
| GGGATTGCAAGCTTAAGAGT+TGG | 0.529065 | 1.1:-35176194 | MS.gene073646:CDS |
| GAGACACTGGAGAAAATTGT+AGG | 0.531550 | 1.1:-35175809 | MS.gene073646:CDS |
| ATGATCATGATATTCTAAAG+AGG | 0.534079 | 1.1:-35175294 | MS.gene073646:CDS |
| ATTCTAAAGAGGAGAGACAC+TGG | 0.536518 | 1.1:-35175822 | MS.gene073646:CDS |
| GTTGTCAGTTCAGTAAAGGT+TGG | 0.536590 | 1.1:-35173055 | MS.gene073646:CDS |
| TGCAAGCTTAAGAGTTGGAG+AGG | 0.542791 | 1.1:-35176189 | MS.gene073646:CDS |
| ATTCTAAAGAGGAAAGACAT+TGG | 0.551775 | 1.1:-35175283 | MS.gene073646:CDS |
| CATGACAAGGTTATAAAGAA+GGG | 0.554767 | 1.1:-35175517 | MS.gene073646:intron |
| CATGACAAGGTTATAAAGAA+GGG | 0.554767 | 1.1:-35175866 | MS.gene073646:intron |
| CGTGACAAGGTTATAAAGAA+GGG | 0.558822 | 1.1:-35175327 | MS.gene073646:intron |
| GAGAATTCCCAAGAAATATG+TGG | 0.561715 | 1.1:-35177020 | MS.gene073646:CDS |
| AGAGGAGACAGCTATGAAAG+TGG | 0.577915 | 1.1:-35176171 | MS.gene073646:CDS |
| TATGATCTTGAAAAGTTGCA+TGG | 0.578670 | 1.1:+35176233 | None:intergenic |
| CTAAAAGAGCATGCTTCCCA+TGG | 0.584321 | 1.1:-35174744 | MS.gene073646:intron |
| GTGATCGTGATGTTCTAAAG+AGG | 0.587079 | 1.1:-35175484 | MS.gene073646:CDS |
| ATTCTACCGTGGAAAGACAT+TGG | 0.588028 | 1.1:-35174786 | MS.gene073646:CDS |
| GAAATACTTGTCTCCTAGAG+CGG | 0.589908 | 1.1:-35172998 | MS.gene073646:CDS |
| GTGATCGTGATATTCTAAAG+AGG | 0.591830 | 1.1:-35175833 | MS.gene073646:CDS |
| ATGACACAAACTTACGCCCA+TGG | 0.594951 | 1.1:-35176359 | MS.gene073646:CDS |
| GTTTCTCCAATGTCTTTCCA+CGG | 0.615143 | 1.1:+35174780 | None:intergenic |
| TATGTGGAGAAATATTGGAA+AGG | 0.617787 | 1.1:-35177004 | MS.gene073646:CDS |
| ATTTATGGAAGAAAGCAAAG+TGG | 0.622753 | 1.1:-35173027 | MS.gene073646:CDS |
| AAATTGTGGAGTTGAAAATG+GGG | 0.628496 | 1.1:-35173124 | MS.gene073646:CDS |
| AATTGTGGAGTTGAAAATGG+GGG | 0.632867 | 1.1:-35173123 | MS.gene073646:CDS |
| AAATGAACTCTAAAGCAGGT+AGG | 0.650077 | 1.1:-35176478 | MS.gene073646:intron |
| TGATGAGAGTGAAATACCAA+AGG | 0.651200 | 1.1:-35176705 | MS.gene073646:CDS |
| ATTGTGGAGTTGAAAATGGG+GGG | 0.654265 | 1.1:-35173122 | MS.gene073646:CDS |
| TGTGTTTAAAGTTTCCATTG+TGG | 0.655197 | 1.1:-35172958 | MS.gene073646:CDS |
| ACTTACCAAGATATGACCAT+GGG | 0.667874 | 1.1:+35176343 | None:intergenic |
| ATATTATCTTATGAAAATCG+GGG | 0.668785 | 1.1:+35177165 | None:intergenic |
| TATAAGGTTCTATCCCACAA+TGG | 0.669677 | 1.1:+35172944 | None:intergenic |
| TACTTACCAAGATATGACCA+TGG | 0.678715 | 1.1:+35176342 | None:intergenic |
| GTGATAAGCATATTCTACCG+TGG | 0.706198 | 1.1:-35174797 | MS.gene073646:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATATATTATAAAAAT+AGG | - | chr1.1:35176508-35176527 | MS.gene073646:intron | 0.0% |
| !!! | TTTTATAATATATTTTTATA+GGG | + | chr1.1:35176506-35176525 | None:intergenic | 0.0% |
| !!! | TTTTTATAATATATTTTTAT+AGG | + | chr1.1:35176507-35176526 | None:intergenic | 0.0% |
| !! | ACAAAATATTTAATAATTCA+AGG | - | chr1.1:35176363-35176382 | MS.gene073646:CDS | 10.0% |
| !! | ATAAAAAATATATAACCATT+TGG | - | chr1.1:35176610-35176629 | MS.gene073646:intron | 10.0% |
| !! | ATAAAAATAATAATCTAAAG+AGG | - | chr1.1:35176064-35176083 | MS.gene073646:intron | 10.0% |
| !! | TTAACTAAATAAAGAAATTA+AGG | + | chr1.1:35174413-35174432 | None:intergenic | 10.0% |
| !!! | AAAATCTCTAATTTTTTTTT+GGG | - | chr1.1:35176538-35176557 | MS.gene073646:intron | 10.0% |
| !!! | AAAATTAGAGATTTTTAAAT+AGG | + | chr1.1:35176476-35176495 | None:intergenic | 10.0% |
| !!! | CTATTTAAAATTAATGTTTA+AGG | + | chr1.1:35175630-35175649 | None:intergenic | 10.0% |
| !!! | CTTAAACATTAATTTTAAAT+AGG | - | chr1.1:35175628-35175647 | MS.gene073646:intron | 10.0% |
| !!! | GAATTATTAAATATTTTGTA+AGG | + | chr1.1:35176362-35176381 | None:intergenic | 10.0% |
| !!! | TAAAAATCTCTAATTTTTTT+GGG | - | chr1.1:35176479-35176498 | MS.gene073646:intron | 10.0% |
| !!! | TAAAATCTCTAATTTTTTTT+TGG | - | chr1.1:35176537-35176556 | MS.gene073646:intron | 10.0% |
| !!! | TTAAAAATCTCTAATTTTTT+TGG | - | chr1.1:35176478-35176497 | MS.gene073646:intron | 10.0% |
| !!! | TTAATTTTTAAATATATTGG+TGG | - | chr1.1:35173287-35173306 | MS.gene073646:intron | 10.0% |
| !! | AAAGAAATTAACGTTTATAA+AGG | + | chr1.1:35173077-35173096 | None:intergenic | 15.0% |
| !! | AAATTATTGATAAGTTTAGA+GGG | + | chr1.1:35175523-35175542 | None:intergenic | 15.0% |
| !! | AATATTATCTTATGAAAATC+GGG | + | chr1.1:35172974-35172993 | None:intergenic | 15.0% |
| !! | ATATTTCTTAAATTTCCAAA+TGG | - | chr1.1:35173167-35173186 | MS.gene073646:CDS | 15.0% |
| !! | CAAAATATTAAATAGTTCAA+GGG | - | chr1.1:35175916-35175935 | MS.gene073646:intron | 15.0% |
| !! | CAATATTATCTTATGAAAAT+CGG | + | chr1.1:35172975-35172994 | None:intergenic | 15.0% |
| !! | TAAATTATTGATAAGTTTAG+AGG | + | chr1.1:35175524-35175543 | None:intergenic | 15.0% |
| !! | TCTAAAAATGTCTATTAATT+TGG | - | chr1.1:35173820-35173839 | MS.gene073646:intron | 15.0% |
| !! | TTGGAAATTTAAGAAATATT+GGG | + | chr1.1:35173166-35173185 | None:intergenic | 15.0% |
| !! | TTTCTAATATATAAGTTTAG+AGG | + | chr1.1:35176244-35176263 | None:intergenic | 15.0% |
| !! | TTTGGAAATTTAAGAAATAT+TGG | + | chr1.1:35173167-35173186 | None:intergenic | 15.0% |
| !!! | AAACATTTTCAAAGAAATTA+AGG | + | chr1.1:35175866-35175885 | None:intergenic | 15.0% |
| !!! | AAAGATTTAGAGATTTTTAA+AGG | + | chr1.1:35176566-35176585 | None:intergenic | 15.0% |
| !!! | ACTTTTAAATAATTTGTGAA+TGG | - | chr1.1:35176335-35176354 | MS.gene073646:intron | 15.0% |
| !!! | AGAAAAATCCATTTTTATAT+TGG | - | chr1.1:35176259-35176278 | MS.gene073646:intron | 15.0% |
| !!! | ATAAGTAAATTCATTTTCAA+AGG | + | chr1.1:35173567-35173586 | None:intergenic | 15.0% |
| !!! | ATATTTGGTTTCAAAAAAAT+TGG | - | chr1.1:35173228-35173247 | MS.gene073646:intron | 15.0% |
| !!! | CTTTTAAATAATTTGTGAAT+GGG | - | chr1.1:35176336-35176355 | MS.gene073646:intron | 15.0% |
| !!! | GAAAAATCCATTTTTATATT+GGG | - | chr1.1:35176260-35176279 | MS.gene073646:intron | 15.0% |
| !!! | TATTTGGTTTCAAAAAAATT+GGG | - | chr1.1:35173229-35173248 | MS.gene073646:intron | 15.0% |
| !!! | TTAAGGATACATTTTTTTTA+GGG | + | chr1.1:35175613-35175632 | None:intergenic | 15.0% |
| !!! | TTGATAATAATATTCTAAAG+AGG | - | chr1.1:35175031-35175050 | MS.gene073646:intron | 15.0% |
| !!! | TTTAAGGATACATTTTTTTA+GGG | + | chr1.1:35175588-35175607 | None:intergenic | 15.0% |
| !!! | TTTAAGGATACATTTTTTTT+AGG | + | chr1.1:35175614-35175633 | None:intergenic | 15.0% |
| !! | AAAAACTATTGACATGTTTA+AGG | - | chr1.1:35176420-35176439 | MS.gene073646:CDS | 20.0% |
| !! | AAAACTATTGACATGTTTAA+GGG | - | chr1.1:35176421-35176440 | MS.gene073646:CDS | 20.0% |
| !! | AAAATATATAACCATTTGGT+TGG | - | chr1.1:35176614-35176633 | MS.gene073646:intron | 20.0% |
| !! | AAGGAAACATGATATTAAAA+AGG | + | chr1.1:35173548-35173567 | None:intergenic | 20.0% |
| !! | ACAAATTATTGATGTGTTTA+AGG | - | chr1.1:35175772-35175791 | MS.gene073646:intron | 20.0% |
| !! | AGGGTTAATTACATAAAATA+TGG | - | chr1.1:35176873-35176892 | MS.gene073646:CDS | 20.0% |
| !! | ATAGTAATAGTGAATAAAAG+TGG | + | chr1.1:35174109-35174128 | None:intergenic | 20.0% |
| !! | ATATTATCTTATGAAAATCG+GGG | + | chr1.1:35172973-35172992 | None:intergenic | 20.0% |
| !! | CAAAAATATAACTTAGAAGT+TGG | - | chr1.1:35174049-35174068 | MS.gene073646:intron | 20.0% |
| !! | CACTAATCTATAATAAAATG+TGG | - | chr1.1:35173856-35173875 | MS.gene073646:intron | 20.0% |
| !! | GCAAAATATTAAATAGTTCA+AGG | - | chr1.1:35175915-35175934 | MS.gene073646:intron | 20.0% |
| !! | TAAAGGTTGGATAAAATTTA+TGG | - | chr1.1:35177093-35177112 | MS.gene073646:intron | 20.0% |
| !! | TATTTCAAGGTTAAGATATT+TGG | - | chr1.1:35173314-35173333 | MS.gene073646:intron | 20.0% |
| !! | TTGAACCTTAGAAAATATTT+AGG | - | chr1.1:35175712-35175731 | MS.gene073646:intron | 20.0% |
| !!! | ACATTTTTTTAGGGAATTTA+AGG | + | chr1.1:35175579-35175598 | None:intergenic | 20.0% |
| !!! | CAACTTCTAAGTTATATTTT+TGG | + | chr1.1:35174051-35174070 | None:intergenic | 20.0% |
| !!! | CACATCAATAATTTGTATAT+AGG | + | chr1.1:35175768-35175787 | None:intergenic | 20.0% |
| !!! | CATCTTTTTGAATTGTTATT+TGG | - | chr1.1:35175977-35175996 | MS.gene073646:intron | 20.0% |
| !!! | CATGTCAATAGTTTTTATAT+AGG | + | chr1.1:35176416-35176435 | None:intergenic | 20.0% |
| !!! | GAATTCCTAAATATTTTCTA+AGG | + | chr1.1:35175720-35175739 | None:intergenic | 20.0% |
| !!! | GTTTAAGGATACATTTTTTT+AGG | + | chr1.1:35175589-35175608 | None:intergenic | 20.0% |
| !!! | TCAGTAAATTAATTTTTCGT+TGG | - | chr1.1:35176388-35176407 | MS.gene073646:CDS | 20.0% |
| !!! | TCATTTTCCCAATATAAAAA+TGG | + | chr1.1:35176270-35176289 | None:intergenic | 20.0% |
| !!! | TGTTCAACAAGAAATATTTT+GGG | - | chr1.1:35173190-35173209 | MS.gene073646:intron | 20.0% |
| !!! | TTCATCAACAGATTTTATAT+TGG | + | chr1.1:35173366-35173385 | None:intergenic | 20.0% |
| !!! | TTTAGATTTTACTATTGTGA+AGG | - | chr1.1:35176167-35176186 | MS.gene073646:CDS | 20.0% |
| !!! | TTTTTATATTGGGAAAATGA+AGG | - | chr1.1:35176270-35176289 | MS.gene073646:intron | 20.0% |
| ! | AAAAATTGTGGAGTTGAAAA+TGG | - | chr1.1:35177009-35177028 | MS.gene073646:CDS | 25.0% |
| ! | AAAATTGTGGAGTTGAAAAT+GGG | - | chr1.1:35177010-35177029 | MS.gene073646:CDS | 25.0% |
| ! | AAAGTTTGAAGATTATACCA+TGG | + | chr1.1:35175411-35175430 | None:intergenic | 25.0% |
| ! | AACTTCTTTATAACCTTGTA+AGG | + | chr1.1:35175001-35175020 | None:intergenic | 25.0% |
| ! | AAGCTCAAATGATAACAAAT+GGG | - | chr1.1:35173453-35173472 | MS.gene073646:intron | 25.0% |
| ! | AAGTTTGAAGATTATACCAT+GGG | + | chr1.1:35175410-35175429 | None:intergenic | 25.0% |
| ! | AATCTAAAGAGGAAATTCAT+TGG | - | chr1.1:35176075-35176094 | MS.gene073646:intron | 25.0% |
| ! | AATTTCTTTGATCCATAACA+AGG | - | chr1.1:35174447-35174466 | MS.gene073646:intron | 25.0% |
| ! | ACTTCTTTATAACCTTGTAA+GGG | + | chr1.1:35175000-35175019 | None:intergenic | 25.0% |
| ! | AGAAATATGTGGAGAAATAT+TGG | - | chr1.1:35173126-35173145 | MS.gene073646:CDS | 25.0% |
| ! | ATATTTCTCCACATATTTCT+TGG | + | chr1.1:35173126-35173145 | None:intergenic | 25.0% |
| ! | ATTTATTATCCTAGTATTCG+TGG | - | chr1.1:35177058-35177077 | MS.gene073646:intron | 25.0% |
| ! | CAGTGTTCAGTTATTATTTA+TGG | - | chr1.1:35175740-35175759 | MS.gene073646:intron | 25.0% |
| ! | CATAAATAATAACTGAACAC+TGG | + | chr1.1:35175742-35175761 | None:intergenic | 25.0% |
| ! | CATACTTGAACAAATTTGAA+GGG | - | chr1.1:35173921-35173940 | MS.gene073646:intron | 25.0% |
| ! | GTCATGGATCAAAAAAATTA+AGG | + | chr1.1:35174604-35174623 | None:intergenic | 25.0% |
| ! | GTCATTAAAACTTCAAAGAA+GGG | + | chr1.1:35173761-35173780 | None:intergenic | 25.0% |
| ! | GTTATGGATCAAAGAAATTA+AGG | + | chr1.1:35174446-35174465 | None:intergenic | 25.0% |
| ! | TATTTCTCCACATATTTCTT+GGG | + | chr1.1:35173125-35173144 | None:intergenic | 25.0% |
| ! | TCATACTTGAACAAATTTGA+AGG | - | chr1.1:35173920-35173939 | MS.gene073646:intron | 25.0% |
| ! | TCTTCTTTATAACCTTGTTA+TGG | + | chr1.1:35174462-35174481 | None:intergenic | 25.0% |
| ! | TGTCATTAAAACTTCAAAGA+AGG | + | chr1.1:35173762-35173781 | None:intergenic | 25.0% |
| !! | ATGATCATGATATTCTAAAG+AGG | - | chr1.1:35174841-35174860 | MS.gene073646:intron | 25.0% |
| !! | ATTTTGTGTGTAGAATCAAA+GGG | - | chr1.1:35176793-35176812 | MS.gene073646:CDS | 25.0% |
| !! | GTGTTCAACAAGAAATATTT+TGG | - | chr1.1:35173189-35173208 | MS.gene073646:intron | 25.0% |
| !! | TTTTATGTAATTAACCCTAC+CGG | + | chr1.1:35176871-35176890 | None:intergenic | 25.0% |
| !!! | AATTTTTTTGATCCATGACA+AGG | - | chr1.1:35174605-35174624 | MS.gene073646:intron | 25.0% |
| !!! | CATTTTTTTTAGGGAGTTTA+AGG | + | chr1.1:35175604-35175623 | None:intergenic | 25.0% |
| AAAAAACCTTGCAACTTCTT+AGG | + | chr1.1:35174157-35174176 | None:intergenic | 30.0% | |
| AAAAACCTTGCAACTTCTTA+GGG | + | chr1.1:35174156-35174175 | None:intergenic | 30.0% | |
| AAAGAAGGGATTCTCATTAT+TGG | + | chr1.1:35173747-35173766 | None:intergenic | 30.0% | |
| AAATTGTGGAGTTGAAAATG+GGG | - | chr1.1:35177011-35177030 | MS.gene073646:CDS | 30.0% | |
| AATTCATTGGAGAATCTTGT+AGG | - | chr1.1:35176088-35176107 | MS.gene073646:intron | 30.0% | |
| AATTTCTTTGATCCATGACA+AGG | - | chr1.1:35175292-35175311 | MS.gene073646:CDS | 30.0% | |
| AATTTCTTTGATCCCTTACA+AGG | - | chr1.1:35174985-35175004 | MS.gene073646:intron | 30.0% | |
| ACTATTACTAAAGCCATCAA+GGG | - | chr1.1:35174124-35174143 | MS.gene073646:intron | 30.0% | |
| ATTCTTAAGCAAAAATTCCC+AGG | - | chr1.1:35173503-35173522 | MS.gene073646:intron | 30.0% | |
| ATTTATGGAAGAAAGCAAAG+TGG | - | chr1.1:35177108-35177127 | MS.gene073646:intron | 30.0% | |
| ATTTCTTGTTGAACACCATT+TGG | + | chr1.1:35173185-35173204 | None:intergenic | 30.0% | |
| CATGACAAGGTTATAAAGAA+GGG | - | chr1.1:35174269-35174288 | MS.gene073646:intron | 30.0% | |
| CATGTCAAGGTTATAAAGAA+AGG | - | chr1.1:35176031-35176050 | MS.gene073646:intron | 30.0% | |
| CTTTCTTTATAACCTTGACA+TGG | + | chr1.1:35176033-35176052 | None:intergenic | 30.0% | |
| GAAGCTCAAATGATAACAAA+TGG | - | chr1.1:35173452-35173471 | MS.gene073646:intron | 30.0% | |
| GATGAAACACAATACATTCA+AGG | - | chr1.1:35176825-35176844 | MS.gene073646:CDS | 30.0% | |
| GTAAGGGATCAAAGAAATTA+AGG | + | chr1.1:35174984-35175003 | None:intergenic | 30.0% | |
| GTCATGGATCAAAGAAATTA+AGG | + | chr1.1:35175291-35175310 | None:intergenic | 30.0% | |
| TACTATTACTAAAGCCATCA+AGG | - | chr1.1:35174123-35174142 | MS.gene073646:intron | 30.0% | |
| TATAAAGAAGGGATCTCTTA+TGG | - | chr1.1:35174629-35174648 | MS.gene073646:intron | 30.0% | |
| TATGATCTTGAAAAGTTGCA+TGG | + | chr1.1:35173905-35173924 | None:intergenic | 30.0% | |
| TATGTGGAGAAATATTGGAA+AGG | - | chr1.1:35173131-35173150 | MS.gene073646:CDS | 30.0% | |
| TGTCATGGATCAAAGAAAAT+AGG | + | chr1.1:35174256-35174275 | None:intergenic | 30.0% | |
| TTCTCTGCAACAAAGAAATT+CGG | + | chr1.1:35173100-35173119 | None:intergenic | 30.0% | |
| TTTATGTAATTAACCCTACC+GGG | + | chr1.1:35176870-35176889 | None:intergenic | 30.0% | |
| TTTGCAAAGTCTCTCAAATA+TGG | - | chr1.1:35173257-35173276 | MS.gene073646:intron | 30.0% | |
| ! | ACACAATACATTCAAGGTTT+TGG | - | chr1.1:35176831-35176850 | MS.gene073646:CDS | 30.0% |
| ! | ATTCTAAAGAGGAAAGACAT+TGG | - | chr1.1:35174852-35174871 | MS.gene073646:intron | 30.0% |
| ! | ATTTTCTTTGATCCATGACA+AGG | - | chr1.1:35174256-35174275 | MS.gene073646:intron | 30.0% |
| ! | CATTTTGTGTGTAGAATCAA+AGG | - | chr1.1:35176792-35176811 | MS.gene073646:CDS | 30.0% |
| ! | GTGTTTAAAGTTTCCATTGT+GGG | - | chr1.1:35177178-35177197 | MS.gene073646:CDS | 30.0% |
| ! | TATTGGTGGATCATATTTCA+AGG | - | chr1.1:35173301-35173320 | MS.gene073646:intron | 30.0% |
| ! | TCTCAAGTGTCAATTTTTGT+AGG | - | chr1.1:35176673-35176692 | MS.gene073646:CDS | 30.0% |
| ! | TGTGTTTAAAGTTTCCATTG+TGG | - | chr1.1:35177177-35177196 | MS.gene073646:CDS | 30.0% |
| !! | ATATTTTGGGTGGAGAATAA+TGG | - | chr1.1:35173203-35173222 | MS.gene073646:intron | 30.0% |
| !! | TAACAAATGAACTCTAAAGC+AGG | - | chr1.1:35173653-35173672 | MS.gene073646:intron | 30.0% |
| !! | TCAACAAGAAATATTTTGGG+TGG | - | chr1.1:35173193-35173212 | MS.gene073646:intron | 30.0% |
| AAGAAGTTAGAAGAATACCC+TGG | + | chr1.1:35175104-35175123 | None:intergenic | 35.0% | |
| AAGACATTGGAGAAACATCT+AGG | - | chr1.1:35175362-35175381 | MS.gene073646:intron | 35.0% | |
| AAGACATTGGAGAAACTTGT+AGG | - | chr1.1:35174865-35174884 | MS.gene073646:intron | 35.0% | |
| AATCAAATGAAGTTCTCACC+TGG | + | chr1.1:35173524-35173543 | None:intergenic | 35.0% | |
| AATTGTGGAGTTGAAAATGG+GGG | - | chr1.1:35177012-35177031 | MS.gene073646:CDS | 35.0% | |
| AATTTCTTTGATCCGTGACA+AGG | - | chr1.1:35174795-35174814 | MS.gene073646:CDS | 35.0% | |
| ACTTACCAAGATATGACCAT+GGG | + | chr1.1:35173795-35173814 | None:intergenic | 35.0% | |
| AGGATGTCGTGAAAAAATTG+TGG | - | chr1.1:35176997-35177016 | MS.gene073646:CDS | 35.0% | |
| ATCAAATGAAGTTCTCACCT+GGG | + | chr1.1:35173523-35173542 | None:intergenic | 35.0% | |
| CCAAAGAGATTTATGGAAAG+AGG | - | chr1.1:35176977-35176996 | MS.gene073646:CDS | 35.0% | |
| CCATGACAAGGTTATAAAGA+AGG | - | chr1.1:35174268-35174287 | MS.gene073646:intron | 35.0% | |
| CCTCTTTCCATAAATCTCTT+TGG | + | chr1.1:35176980-35176999 | None:intergenic | 35.0% | |
| CCTTCTTTATAACCTTGTCA+CGG | + | chr1.1:35174271-35174290 | None:intergenic | 35.0% | |
| CCTTCTTTATAACCTTGTCA+TGG | + | chr1.1:35174271-35174290 | None:intergenic | 35.0% | |
| CGTGACAAGGTTATAAAGAA+GGG | - | chr1.1:35174808-35174827 | MS.gene073646:CDS | 35.0% | |
| GAAGAAAGCAAAGTGGAAAT+TGG | - | chr1.1:35177115-35177134 | MS.gene073646:intron | 35.0% | |
| GACATGGATCAAAGAAATCA+AGG | + | chr1.1:35176017-35176036 | None:intergenic | 35.0% | |
| GAGAATTCCCAAGAAATATG+TGG | - | chr1.1:35173115-35173134 | MS.gene073646:CDS | 35.0% | |
| GAGACATTGGAGAAATTTGT+CGG | - | chr1.1:35175055-35175074 | MS.gene073646:intron | 35.0% | |
| GATTTCTTTGATCCATGTCA+AGG | - | chr1.1:35176018-35176037 | MS.gene073646:intron | 35.0% | |
| GTCACGGATCAAAGAAATTA+AGG | + | chr1.1:35174794-35174813 | None:intergenic | 35.0% | |
| GTTATCATTTGAGCTTCCTT+TGG | + | chr1.1:35173449-35173468 | None:intergenic | 35.0% | |
| TACTTACCAAGATATGACCA+TGG | + | chr1.1:35173796-35173815 | None:intergenic | 35.0% | |
| TATAAAGAAGGGATCTCTTC+TGG | - | chr1.1:35174280-35174299 | MS.gene073646:intron | 35.0% | |
| TGATGAGAGTGAAATACCAA+AGG | - | chr1.1:35173430-35173449 | MS.gene073646:intron | 35.0% | |
| TGGAGAATAATGGCGATATT+TGG | - | chr1.1:35173213-35173232 | MS.gene073646:intron | 35.0% | |
| TGTGGTTCATGAACTGAAAT+AGG | - | chr1.1:35173874-35173893 | MS.gene073646:intron | 35.0% | |
| TTTGGTAAATTCCAAACACC+CGG | - | chr1.1:35176849-35176868 | MS.gene073646:CDS | 35.0% | |
| TTTGGTATTTCACTCTCATC+AGG | + | chr1.1:35173431-35173450 | None:intergenic | 35.0% | |
| ! | ATTCTAAAGAGGAGAGACAT+TGG | - | chr1.1:35175042-35175061 | MS.gene073646:intron | 35.0% |
| ! | GTGATCGTGATATTCTAAAG+AGG | - | chr1.1:35174302-35174321 | MS.gene073646:intron | 35.0% |
| ! | GTGATCGTGATATTCTAAAG+TGG | - | chr1.1:35174302-35174321 | MS.gene073646:intron | 35.0% |
| !! | AAATGAACTCTAAAGCAGGT+AGG | - | chr1.1:35173657-35173676 | MS.gene073646:intron | 35.0% |
| !! | AAGAGCATGCATTTTTGGAA+GGG | + | chr1.1:35174353-35174372 | None:intergenic | 35.0% |
| !! | TCTTCTAGTTCTATGACTAC+TGG | - | chr1.1:35174010-35174029 | MS.gene073646:intron | 35.0% |
| AACTGACAACCACGAATACT+AGG | + | chr1.1:35177070-35177089 | None:intergenic | 40.0% | |
| AAGACACTCGAGAAACTTGT+AGG | - | chr1.1:35174517-35174536 | MS.gene073646:intron | 40.0% | |
| AAGACGCTAGAGAAACTTGT+AGG | - | chr1.1:35174675-35174694 | MS.gene073646:intron | 40.0% | |
| AGACTGTCAAACCAACCAAA+TGG | + | chr1.1:35176628-35176647 | None:intergenic | 40.0% | |
| ATTCTACCGTGGAAAGACAT+TGG | - | chr1.1:35175349-35175368 | MS.gene073646:intron | 40.0% | |
| ATTGTGGAGTTGAAAATGGG+GGG | - | chr1.1:35177013-35177032 | MS.gene073646:CDS | 40.0% | |
| CCAAAAATGCATGCTCTTCA+GGG | - | chr1.1:35174355-35174374 | MS.gene073646:intron | 40.0% | |
| CCGTGACAAGGTTATAAAGA+AGG | - | chr1.1:35174807-35174826 | MS.gene073646:CDS | 40.0% | |
| GAAATACTTGTCTCCTAGAG+CGG | - | chr1.1:35177137-35177156 | MS.gene073646:intron | 40.0% | |
| GAGACACTGGAGAAAATTGT+AGG | - | chr1.1:35174326-35174345 | MS.gene073646:intron | 40.0% | |
| GCATGCACCAAAGAGATTTA+TGG | - | chr1.1:35176970-35176989 | MS.gene073646:CDS | 40.0% | |
| GTGATAAGCATATTCTACCG+TGG | - | chr1.1:35175338-35175357 | MS.gene073646:intron | 40.0% | |
| GTTGTCAGTTCAGTAAAGGT+TGG | - | chr1.1:35177080-35177099 | MS.gene073646:intron | 40.0% | |
| GTTTCTCCAATGTCTTTCCA+CGG | + | chr1.1:35175358-35175377 | None:intergenic | 40.0% | |
| TAAATTCCAAACACCCGGTA+GGG | - | chr1.1:35176854-35176873 | MS.gene073646:CDS | 40.0% | |
| TCCAAAAATGCATGCTCTTC+AGG | - | chr1.1:35174354-35174373 | MS.gene073646:intron | 40.0% | |
| ! | ATTCTAAAGAGGAGAGACAC+TGG | - | chr1.1:35174313-35174332 | MS.gene073646:intron | 40.0% |
| ! | CTCTGTAGATCATGCAGTTT+TGG | + | chr1.1:35176120-35176139 | None:intergenic | 40.0% |
| ! | TTTTCTCATCAATCCGCTCT+AGG | + | chr1.1:35177153-35177172 | None:intergenic | 40.0% |
| !! | AAGAGCATGCACTTTTGGAA+GGG | + | chr1.1:35174544-35174563 | None:intergenic | 40.0% |
| !! | AAGAGCTTGCACTTTTGGAA+GGG | + | chr1.1:35174702-35174721 | None:intergenic | 40.0% |
| !! | CTAGTTCTATGACTACTGGT+TGG | - | chr1.1:35174014-35174033 | MS.gene073646:intron | 40.0% |
| !! | GAAGAGCATGCATTTTTGGA+AGG | + | chr1.1:35174354-35174373 | None:intergenic | 40.0% |
| !! | GTGATCGTGATGTTCTAAAG+AGG | - | chr1.1:35174651-35174670 | MS.gene073646:intron | 40.0% |
| !! | TTTGGTTGGTTTGACAGTCT+TGG | - | chr1.1:35176628-35176647 | MS.gene073646:intron | 40.0% |
| !!! | GTAGATCATGCAGTTTTGGA+CGG | + | chr1.1:35176116-35176135 | None:intergenic | 40.0% |
| AATTAACCCTACCGGGTGTT+TGG | + | chr1.1:35176863-35176882 | None:intergenic | 45.0% | |
| AGAGGAGACAGCTATGAAAG+TGG | - | chr1.1:35173964-35173983 | MS.gene073646:intron | 45.0% | |
| ATGACACAAACTTACGCCCA+TGG | - | chr1.1:35173776-35173795 | MS.gene073646:intron | 45.0% | |
| CCAAACCCTAAGAAGTTGCA+AGG | - | chr1.1:35174148-35174167 | MS.gene073646:intron | 45.0% | |
| CCTTGCAACTTCTTAGGGTT+TGG | + | chr1.1:35174151-35174170 | None:intergenic | 45.0% | |
| CGTGGTTGTCAGTTCAGTAA+AGG | - | chr1.1:35177076-35177095 | MS.gene073646:intron | 45.0% | |
| GGGATTGCAAGCTTAAGAGT+TGG | - | chr1.1:35173941-35173960 | MS.gene073646:intron | 45.0% | |
| GTAAATTCCAAACACCCGGT+AGG | - | chr1.1:35176853-35176872 | MS.gene073646:CDS | 45.0% | |
| TGAAAATGGGGGGACAATCA+TGG | - | chr1.1:35177023-35177042 | MS.gene073646:intron | 45.0% | |
| TGCAAGCTTAAGAGTTGGAG+AGG | - | chr1.1:35173946-35173965 | MS.gene073646:intron | 45.0% | |
| TTACGCCCATGGTCATATCT+TGG | - | chr1.1:35173787-35173806 | MS.gene073646:intron | 45.0% | |
| ! | CCAAAAGTGCAAGCTCTTCA+AGG | - | chr1.1:35174704-35174723 | MS.gene073646:intron | 45.0% |
| ! | CCAAAAGTGCATGATCTCCA+GGG | - | chr1.1:35175084-35175103 | MS.gene073646:intron | 45.0% |
| ! | CCAAAAGTGCATGCTCTTCA+GGG | - | chr1.1:35174546-35174565 | MS.gene073646:intron | 45.0% |
| ! | CCTTGAAGAGCTTGCACTTT+TGG | + | chr1.1:35174707-35174726 | None:intergenic | 45.0% |
| ! | CTAAAAGAGCATGCTTCCCA+TGG | - | chr1.1:35175391-35175410 | MS.gene073646:intron | 45.0% |
| ! | GAAGAGCTTGCACTTTTGGA+AGG | + | chr1.1:35174703-35174722 | None:intergenic | 45.0% |
| ! | GGAGATCATGCACTTTTGGA+CGG | + | chr1.1:35175083-35175102 | None:intergenic | 45.0% |
| ! | TCCAAAAGTGCATGATCTCC+AGG | - | chr1.1:35175083-35175102 | MS.gene073646:intron | 45.0% |
| ! | TCCAAAAGTGCATGCTCTTC+AGG | - | chr1.1:35174545-35174564 | MS.gene073646:intron | 45.0% |
| !! | CCCTGAAGAGCATGCATTTT+TGG | + | chr1.1:35174358-35174377 | None:intergenic | 45.0% |
| !! | GAAGAGCATGCACTTTTGGA+AGG | + | chr1.1:35174545-35174564 | None:intergenic | 45.0% |
| !!! | ATTTATTTGTAATTTTTTTA+TGG | - | chr1.1:35175226-35175245 | MS.gene073646:intron | 5.0% |
| !!! | CTTTTAATTTTTAAATATAT+TGG | - | chr1.1:35173284-35173303 | MS.gene073646:intron | 5.0% |
| ! | CCCTGGAGATCATGCACTTT+TGG | + | chr1.1:35175087-35175106 | None:intergenic | 50.0% |
| ! | CTTAGGGTTTGGTCCCTTGA+TGG | + | chr1.1:35174140-35174159 | None:intergenic | 50.0% |
| !! | CCCTGAAGAGCATGCACTTT+TGG | + | chr1.1:35174549-35174568 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 35172953 | 35177204 | 35172953 | ID=MS.gene073646 |
| chr1.1 | mRNA | 35172953 | 35177204 | 35172953 | ID=MS.gene073646.t1;Parent=MS.gene073646 |
| chr1.1 | exon | 35177148 | 35177204 | 35177148 | ID=MS.gene073646.t1.exon1;Parent=MS.gene073646.t1 |
| chr1.1 | CDS | 35177148 | 35177204 | 35177148 | ID=cds.MS.gene073646.t1;Parent=MS.gene073646.t1 |
| chr1.1 | exon | 35176633 | 35177041 | 35176633 | ID=MS.gene073646.t1.exon2;Parent=MS.gene073646.t1 |
| chr1.1 | CDS | 35176633 | 35177041 | 35176633 | ID=cds.MS.gene073646.t1;Parent=MS.gene073646.t1 |
| chr1.1 | exon | 35176349 | 35176485 | 35176349 | ID=MS.gene073646.t1.exon3;Parent=MS.gene073646.t1 |
| chr1.1 | CDS | 35176349 | 35176485 | 35176349 | ID=cds.MS.gene073646.t1;Parent=MS.gene073646.t1 |
| chr1.1 | exon | 35176126 | 35176261 | 35176126 | ID=MS.gene073646.t1.exon4;Parent=MS.gene073646.t1 |
| chr1.1 | CDS | 35176126 | 35176261 | 35176126 | ID=cds.MS.gene073646.t1;Parent=MS.gene073646.t1 |
| chr1.1 | exon | 35175781 | 35175879 | 35175781 | ID=MS.gene073646.t1.exon5;Parent=MS.gene073646.t1 |
| chr1.1 | CDS | 35175781 | 35175879 | 35175781 | ID=cds.MS.gene073646.t1;Parent=MS.gene073646.t1 |
| chr1.1 | exon | 35175432 | 35175530 | 35175432 | ID=MS.gene073646.t1.exon6;Parent=MS.gene073646.t1 |
| chr1.1 | CDS | 35175432 | 35175530 | 35175432 | ID=cds.MS.gene073646.t1;Parent=MS.gene073646.t1 |
| chr1.1 | exon | 35175242 | 35175340 | 35175242 | ID=MS.gene073646.t1.exon7;Parent=MS.gene073646.t1 |
| chr1.1 | CDS | 35175242 | 35175340 | 35175242 | ID=cds.MS.gene073646.t1;Parent=MS.gene073646.t1 |
| chr1.1 | exon | 35174745 | 35174843 | 35174745 | ID=MS.gene073646.t1.exon8;Parent=MS.gene073646.t1 |
| chr1.1 | CDS | 35174745 | 35174843 | 35174745 | ID=cds.MS.gene073646.t1;Parent=MS.gene073646.t1 |
| chr1.1 | exon | 35174019 | 35174047 | 35174019 | ID=MS.gene073646.t1.exon9;Parent=MS.gene073646.t1 |
| chr1.1 | CDS | 35174019 | 35174047 | 35174019 | ID=cds.MS.gene073646.t1;Parent=MS.gene073646.t1 |
| chr1.1 | exon | 35172953 | 35173186 | 35172953 | ID=MS.gene073646.t1.exon10;Parent=MS.gene073646.t1 |
| chr1.1 | CDS | 35172953 | 35173186 | 35172953 | ID=cds.MS.gene073646.t1;Parent=MS.gene073646.t1 |
| Gene Sequence |
| Protein sequence |
