Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026334.t1 | KEH40807.1 | 88.5 | 416 | 44 | 3 | 1 | 415 | 1 | 413 | 9.90E-216 | 759.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026334.t1 | Q8L3W1 | 22.5 | 342 | 192 | 11 | 9 | 284 | 6 | 340 | 4.8e-09 | 63.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026334.t1 | A0A072VG97 | 88.5 | 416 | 44 | 3 | 1 | 415 | 1 | 413 | 7.1e-216 | 759.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene026334.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026334.t1 | MTR_1g035620 | 88.249 | 417 | 45 | 3 | 1 | 416 | 1 | 414 | 0.0 | 754 |
| MS.gene026334.t1 | MTR_1g050845 | 82.586 | 379 | 50 | 3 | 1 | 378 | 1 | 364 | 0.0 | 624 |
| MS.gene026334.t1 | MTR_1g035570 | 44.651 | 430 | 181 | 11 | 1 | 410 | 1 | 393 | 4.82e-111 | 332 |
| MS.gene026334.t1 | MTR_1g035640 | 40.461 | 477 | 203 | 17 | 1 | 410 | 1 | 463 | 3.10e-93 | 288 |
| MS.gene026334.t1 | MTR_6g061070 | 35.011 | 457 | 237 | 11 | 9 | 410 | 18 | 469 | 1.09e-69 | 228 |
| MS.gene026334.t1 | MTR_1g035650 | 54.067 | 209 | 77 | 4 | 1 | 196 | 1 | 203 | 5.70e-66 | 209 |
| MS.gene026334.t1 | MTR_1g035490 | 43.416 | 281 | 139 | 9 | 139 | 410 | 58 | 327 | 1.30e-62 | 205 |
| MS.gene026334.t1 | MTR_5g044670 | 31.561 | 301 | 178 | 8 | 3 | 281 | 10 | 304 | 2.01e-33 | 128 |
| MS.gene026334.t1 | MTR_1g033740 | 42.331 | 163 | 73 | 4 | 9 | 156 | 22 | 178 | 5.65e-33 | 123 |
| MS.gene026334.t1 | MTR_7g050710 | 30.363 | 303 | 174 | 9 | 6 | 278 | 10 | 305 | 1.04e-32 | 125 |
| MS.gene026334.t1 | MTR_3g098790 | 30.241 | 291 | 182 | 8 | 6 | 278 | 10 | 297 | 1.26e-32 | 125 |
| MS.gene026334.t1 | MTR_8g103940 | 22.947 | 475 | 277 | 13 | 9 | 412 | 39 | 495 | 5.42e-31 | 124 |
| MS.gene026334.t1 | MTR_7g050580 | 29.730 | 296 | 168 | 10 | 6 | 278 | 10 | 288 | 9.29e-30 | 117 |
| MS.gene026334.t1 | MTR_7g050560 | 29.392 | 296 | 169 | 11 | 6 | 278 | 10 | 288 | 1.09e-27 | 112 |
| MS.gene026334.t1 | MTR_1g035480 | 39.306 | 173 | 83 | 6 | 2 | 156 | 3 | 171 | 4.07e-27 | 107 |
| MS.gene026334.t1 | MTR_6g043890 | 28.772 | 285 | 168 | 8 | 9 | 266 | 15 | 291 | 4.81e-27 | 110 |
| MS.gene026334.t1 | MTR_1g108780 | 24.138 | 464 | 260 | 14 | 24 | 412 | 12 | 458 | 1.01e-26 | 111 |
| MS.gene026334.t1 | MTR_1g035500 | 36.810 | 163 | 91 | 4 | 5 | 156 | 21 | 182 | 2.49e-26 | 105 |
| MS.gene026334.t1 | MTR_7g050720 | 28.939 | 311 | 175 | 11 | 6 | 278 | 7 | 309 | 1.53e-25 | 106 |
| MS.gene026334.t1 | MTR_4g119990 | 26.299 | 308 | 177 | 10 | 9 | 278 | 15 | 310 | 1.58e-22 | 98.6 |
| MS.gene026334.t1 | MTR_1g035510 | 35.570 | 149 | 89 | 3 | 25 | 168 | 2 | 148 | 1.62e-22 | 95.5 |
| MS.gene026334.t1 | MTR_1g035510 | 42.574 | 101 | 55 | 2 | 267 | 364 | 122 | 222 | 2.71e-17 | 80.9 |
| MS.gene026334.t1 | MTR_7g050590 | 27.622 | 286 | 166 | 8 | 25 | 278 | 2 | 278 | 3.82e-22 | 96.3 |
| MS.gene026334.t1 | MTR_1g035520 | 27.184 | 309 | 156 | 10 | 25 | 278 | 88 | 382 | 4.49e-22 | 97.4 |
| MS.gene026334.t1 | MTR_3g061310 | 25.086 | 291 | 185 | 9 | 6 | 278 | 9 | 284 | 3.71e-21 | 93.2 |
| MS.gene026334.t1 | MTR_3g061320 | 25.087 | 287 | 184 | 10 | 6 | 278 | 9 | 278 | 3.22e-20 | 90.5 |
| MS.gene026334.t1 | MTR_1g035470 | 43.434 | 99 | 55 | 1 | 25 | 123 | 2 | 99 | 3.30e-20 | 86.7 |
| MS.gene026334.t1 | MTR_3g061370 | 24.825 | 286 | 185 | 8 | 9 | 278 | 9 | 280 | 5.90e-19 | 86.7 |
| MS.gene026334.t1 | MTR_3g061290 | 32.370 | 173 | 105 | 5 | 6 | 174 | 9 | 173 | 1.64e-18 | 84.0 |
| MS.gene026334.t1 | MTR_3g061340 | 25.352 | 284 | 182 | 9 | 6 | 278 | 9 | 273 | 4.49e-18 | 84.3 |
| MS.gene026334.t1 | MTR_3g061350 | 23.675 | 283 | 198 | 7 | 6 | 278 | 9 | 283 | 5.63e-18 | 84.0 |
| MS.gene026334.t1 | MTR_3g061330 | 26.699 | 206 | 140 | 4 | 6 | 202 | 9 | 212 | 9.31e-18 | 82.8 |
| MS.gene026334.t1 | MTR_1g035460 | 24.830 | 294 | 171 | 9 | 25 | 278 | 2 | 285 | 8.87e-17 | 82.0 |
| MS.gene026334.t1 | MTR_1g035440 | 38.000 | 100 | 59 | 2 | 9 | 105 | 15 | 114 | 4.22e-14 | 72.0 |
| MS.gene026334.t1 | MTR_7g050640 | 38.462 | 91 | 54 | 1 | 8 | 96 | 12 | 102 | 1.42e-13 | 67.4 |
| MS.gene026334.t1 | MTR_3g005480 | 22.378 | 286 | 170 | 8 | 9 | 284 | 21 | 264 | 1.30e-12 | 68.2 |
| MS.gene026334.t1 | MTR_3g005490 | 23.381 | 278 | 176 | 7 | 9 | 284 | 21 | 263 | 1.36e-12 | 67.8 |
| MS.gene026334.t1 | MTR_5g070440 | 22.742 | 299 | 190 | 10 | 1 | 291 | 9 | 274 | 4.97e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026334.t1 | AT1G49475 | 32.479 | 117 | 72 | 3 | 9 | 123 | 34 | 145 | 5.14e-11 | 62.0 |
| MS.gene026334.t1 | AT3G18990 | 22.029 | 345 | 190 | 10 | 9 | 284 | 6 | 340 | 8.04e-11 | 63.5 |
Find 0 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAATTATTTAATATTTCA+AGG | + | 10221:5177-5196 | MS.gene026334:intron | 10.0% |
| !! | CAAAATAAAATAAAATTACA+AGG | - | 10221:4124-4143 | MS.gene026334:intergenic | 10.0% |
| !!! | AAATAATTTGTAATATATGA+GGG | - | 10221:5168-5187 | MS.gene026334:intergenic | 10.0% |
| !!! | TAAATAATTTGTAATATATG+AGG | - | 10221:5169-5188 | MS.gene026334:intergenic | 10.0% |
| !!! | TGTAATTTTATTTTATTTTG+AGG | + | 10221:4124-4143 | MS.gene026334:intron | 10.0% |
| !! | AAAAAATATAACTTACAAGT+TGG | + | 10221:4683-4702 | MS.gene026334:CDS | 15.0% |
| !! | AATATCTTAACCTTAAAATA+TGG | - | 10221:3890-3909 | MS.gene026334:intergenic | 15.0% |
| !! | ATAAGTATAATTAATGCAAA+GGG | - | 10221:3649-3668 | MS.gene026334:intergenic | 15.0% |
| !! | ATATCTTAACCTTAAAATAT+GGG | - | 10221:3889-3908 | MS.gene026334:intergenic | 15.0% |
| !! | GTTATTTAATTATAGTTGAA+AGG | - | 10221:3570-3589 | MS.gene026334:intergenic | 15.0% |
| !!! | AACTTGTAAGTTATATTTTT+TGG | - | 10221:4684-4703 | MS.gene026334:intergenic | 15.0% |
| !!! | ATAAAATTTAAAACAGAACT+TGG | - | 10221:5108-5127 | MS.gene026334:intergenic | 15.0% |
| !!! | ATTAATAACAAAAGTATAGT+TGG | - | 10221:3596-3615 | MS.gene026334:intergenic | 15.0% |
| !!! | CTTGAACTAATATTTTTAAT+TGG | - | 10221:5205-5224 | MS.gene026334:intergenic | 15.0% |
| !!! | CTTTTCAAAAAATTATAACT+AGG | + | 10221:5040-5059 | MS.gene026334:intron | 15.0% |
| !!! | CTTTTTTAAATAAAGTATGA+AGG | - | 10221:4786-4805 | MS.gene026334:intergenic | 15.0% |
| !!! | GTTTAAATTTTTTAGAGAAT+AGG | + | 10221:4984-5003 | MS.gene026334:intron | 15.0% |
| !!! | TAAGTATAATGTTTTATAGT+AGG | - | 10221:4331-4350 | MS.gene026334:intergenic | 15.0% |
| !!! | TATTTTAAGGTTAAGATATT+TGG | + | 10221:3890-3909 | MS.gene026334:CDS | 15.0% |
| !!! | TGTTCTAAATTATTGTTTAT+TGG | + | 10221:4381-4400 | MS.gene026334:intron | 15.0% |
| !!! | TTCATCTATGAATTTTATAT+TGG | - | 10221:3942-3961 | MS.gene026334:intergenic | 15.0% |
| !! | AGGATTATTTATGTTAAATG+TGG | + | 10221:5408-5427 | MS.gene026334:intron | 20.0% |
| !! | CAATTGATATTAAGCAAATT+TGG | - | 10221:4836-4855 | MS.gene026334:intergenic | 20.0% |
| !! | GATAAGTATAATTAATGCAA+AGG | - | 10221:3650-3669 | MS.gene026334:intergenic | 20.0% |
| !! | GATAATATTTGGAAAAAAAG+AGG | + | 10221:4913-4932 | MS.gene026334:CDS | 20.0% |
| !! | TCTATTGTGATGATAATATT+TGG | + | 10221:4902-4921 | MS.gene026334:CDS | 20.0% |
| !! | TTTAACATAAATAATCCTAC+CGG | - | 10221:5406-5425 | MS.gene026334:intergenic | 20.0% |
| !!! | AACAAAGTTACTAGTAATTT+TGG | + | 10221:4456-4475 | MS.gene026334:intron | 20.0% |
| !!! | AAGTTATATTTTTTGGCAAA+TGG | - | 10221:4677-4696 | MS.gene026334:intergenic | 20.0% |
| !!! | ATCTATTTTAGCCATTTATA+AGG | - | 10221:4157-4176 | MS.gene026334:intergenic | 20.0% |
| !!! | GCTTTAGTTTTCAAATATTT+AGG | + | 10221:3860-3879 | MS.gene026334:CDS | 20.0% |
| !!! | TTAGTTTTCAAATATTTAGG+TGG | + | 10221:3863-3882 | MS.gene026334:CDS | 20.0% |
| !!! | TTTTTGTTTTTTAACTTTGC+AGG | + | 10221:4176-4195 | MS.gene026334:intron | 20.0% |
| ! | AAATGATTATCTGTTTCAGA+GGG | + | 10221:3673-3692 | MS.gene026334:intron | 25.0% |
| ! | AGAAATTTGTGGAGAAATAT+TGG | + | 10221:3702-3721 | MS.gene026334:CDS | 25.0% |
| ! | ATATTTCTCCACAAATTTCT+TGG | - | 10221:3702-3721 | MS.gene026334:intergenic | 25.0% |
| ! | ATTAATCAGCAAAAAATCTC+TGG | + | 10221:4064-4083 | MS.gene026334:CDS | 25.0% |
| ! | ATTTGAATGACAACCTTAAA+GGG | + | 10221:4546-4565 | MS.gene026334:CDS | 25.0% |
| ! | CATAAATTTAAGGAAGATTG+CGG | + | 10221:5628-5647 | MS.gene026334:CDS | 25.0% |
| ! | CTGAAACAGATAATCATTTA+TGG | - | 10221:3672-3691 | MS.gene026334:intergenic | 25.0% |
| ! | TAAACCTTGAATTGAAATAG+AGG | + | 10221:4498-4517 | MS.gene026334:intron | 25.0% |
| ! | TAAATGATTATCTGTTTCAG+AGG | + | 10221:3672-3691 | MS.gene026334:intron | 25.0% |
| ! | TATTTCTCCACAAATTTCTT+GGG | - | 10221:3701-3720 | MS.gene026334:intergenic | 25.0% |
| ! | TATTTGAATGACAACCTTAA+AGG | + | 10221:4545-4564 | MS.gene026334:CDS | 25.0% |
| ! | TTAACATAAATAATCCTACC+GGG | - | 10221:5405-5424 | MS.gene026334:intergenic | 25.0% |
| !! | ATGTTTGGTTTAAGAGAAAT+TGG | + | 10221:3804-3823 | MS.gene026334:CDS | 25.0% |
| !! | TAACTAGGTTTTCTTACTTT+AGG | + | 10221:5055-5074 | MS.gene026334:intron | 25.0% |
| !! | TCATAATATTGCACTTTTAC+AGG | - | 10221:5574-5593 | MS.gene026334:intergenic | 25.0% |
| !! | TGCTCAAAAGGAAATATTTT+GGG | + | 10221:3766-3785 | MS.gene026334:CDS | 25.0% |
| !! | TGTTTGGTTTAAGAGAAATT+GGG | + | 10221:3805-3824 | MS.gene026334:CDS | 25.0% |
| AAGTATGAAGGAAAAACCTT+TGG | - | 10221:4774-4793 | MS.gene026334:intergenic | 30.0% | |
| AATTCCTTTGAACAATGACA+AGG | + | 10221:4865-4884 | MS.gene026334:intron | 30.0% | |
| AGTCTAAGAATTACTGGATT+TGG | - | 10221:3737-3756 | MS.gene026334:intergenic | 30.0% | |
| ATAACCTTGTCATTGTTCAA+AGG | - | 10221:4872-4891 | MS.gene026334:intergenic | 30.0% | |
| ATAGTTATGGTGAATGAAAG+TGG | - | 10221:4743-4762 | MS.gene026334:intergenic | 30.0% | |
| ATTTGTAATATATGAGGGAG+AGG | - | 10221:5163-5182 | MS.gene026334:intergenic | 30.0% | |
| CAAAATCATGAACTACACAA+TGG | + | 10221:3436-3455 | MS.gene026334:CDS | 30.0% | |
| GATATTTGGTCACAATACAT+TGG | + | 10221:3904-3923 | MS.gene026334:CDS | 30.0% | |
| GTATCCTCTATTTCAATTCA+AGG | - | 10221:4505-4524 | MS.gene026334:intergenic | 30.0% | |
| TTCATAGATGAAAGTTGTGA+AGG | + | 10221:3950-3969 | MS.gene026334:CDS | 30.0% | |
| TTGTCATTGTTCAAAGGAAT+TGG | - | 10221:4866-4885 | MS.gene026334:intergenic | 30.0% | |
| ! | GACAATTCAAGTTCAAAACT+TGG | - | 10221:4275-4294 | MS.gene026334:intergenic | 30.0% |
| ! | GAGGTATTCTACCTTATAAA+TGG | + | 10221:4143-4162 | MS.gene026334:intron | 30.0% |
| ! | GTGCTCAAAAGGAAATATTT+TGG | + | 10221:3765-3784 | MS.gene026334:CDS | 30.0% |
| ! | TTTGCAAAGTCTCTAAAAGA+TGG | + | 10221:3833-3852 | MS.gene026334:CDS | 30.0% |
| !! | TCAAAAGGAAATATTTTGGG+AGG | + | 10221:3769-3788 | MS.gene026334:CDS | 30.0% |
| AAATTCGTGCAGTTCACAAA+TGG | + | 10221:5535-5554 | MS.gene026334:CDS | 35.0% | |
| AACTTTGCAGGTAAGAACAA+AGG | + | 10221:4188-4207 | MS.gene026334:intron | 35.0% | |
| AATTCGTGCAGTTCACAAAT+GGG | + | 10221:5536-5555 | MS.gene026334:CDS | 35.0% | |
| ACATCTCAAAGGAGAAAAAG+TGG | + | 10221:4031-4050 | MS.gene026334:CDS | 35.0% | |
| ACTATCTTCAAGAACTCTTC+TGG | - | 10221:3415-3434 | MS.gene026334:intergenic | 35.0% | |
| ATGAGAATGAGAGAACTTGT+AGG | + | 10221:5590-5609 | MS.gene026334:CDS | 35.0% | |
| GAACAATGACAAGGTTATGA+AGG | + | 10221:4874-4893 | MS.gene026334:intron | 35.0% | |
| GTAATTCTTAGACTCCCAAA+TGG | + | 10221:3743-3762 | MS.gene026334:CDS | 35.0% | |
| TATGCTCTTGAAAAGTCACT+TGG | - | 10221:4527-4546 | MS.gene026334:intergenic | 35.0% | |
| TCATCTGCAAGCATTAGATT+TGG | + | 10221:4569-4588 | MS.gene026334:CDS | 35.0% | |
| TTTGGGAGTCTAAGAATTAC+TGG | - | 10221:3743-3762 | MS.gene026334:intergenic | 35.0% | |
| ! | ACAAAGGAGGCATAATTAAG+AGG | + | 10221:4204-4223 | MS.gene026334:CDS | 35.0% |
| ! | ATTTCCTTTTGAGCACCATT+TGG | - | 10221:3761-3780 | MS.gene026334:intergenic | 35.0% |
| ! | CAAAGGAGGCATAATTAAGA+GGG | + | 10221:4205-4224 | MS.gene026334:CDS | 35.0% |
| ! | TGCAGGTTGGCATAAATTTA+AGG | + | 10221:5618-5637 | MS.gene026334:CDS | 35.0% |
| ! | TTACGCTCATGGCTATATTT+TGG | + | 10221:4301-4320 | MS.gene026334:CDS | 35.0% |
| ! | TTTAGGTGGCCCATATTTTA+AGG | + | 10221:3877-3896 | MS.gene026334:CDS | 35.0% |
| ! | TTTCCTTTTGAGCACCATTT+GGG | - | 10221:3760-3779 | MS.gene026334:intergenic | 35.0% |
| !! | AAGAGACATAAAGAGTGTCA+TGG | + | 10221:5511-5530 | MS.gene026334:CDS | 35.0% |
| !! | TGGAAAAAAAGAGGCATTGA+AGG | + | 10221:4922-4941 | MS.gene026334:CDS | 35.0% |
| AACTTCACCTCCACTTTCAT+AGG | - | 10221:4605-4624 | MS.gene026334:intergenic | 40.0% | |
| ACACGAATCTCGATTGTGTT+CGG | - | 10221:5370-5389 | MS.gene026334:intergenic | 40.0% | |
| AGAACTTGTAGGTTCTATGC+AGG | + | 10221:5601-5620 | MS.gene026334:CDS | 40.0% | |
| AGTACATACTCGAGAGATCA+TGG | - | 10221:4963-4982 | MS.gene026334:intergenic | 40.0% | |
| ATAACTATCACCCAAGCCAA+AGG | + | 10221:4755-4774 | MS.gene026334:CDS | 40.0% | |
| ATTCGTGCAGTTCACAAATG+GGG | + | 10221:5537-5556 | MS.gene026334:CDS | 40.0% | |
| CATAAATAATCCTACCGGGT+AGG | - | 10221:5401-5420 | MS.gene026334:intergenic | 40.0% | |
| GAAGTTGTTGAACTGAGTGA+TGG | + | 10221:3989-4008 | MS.gene026334:CDS | 40.0% | |
| GATGGCAATGTTAATAGTGC+TGG | + | 10221:4007-4026 | MS.gene026334:CDS | 40.0% | |
| TCACAAATGGGGGAAAATCA+TGG | + | 10221:5548-5567 | MS.gene026334:CDS | 40.0% | |
| TGAAGGAAAAACCTTTGGCT+TGG | - | 10221:4769-4788 | MS.gene026334:intergenic | 40.0% | |
| TGAGAACATGCCTATGAAAG+TGG | + | 10221:4592-4611 | MS.gene026334:CDS | 40.0% | |
| TGTGTTTCAGCAGACTTAGA+AGG | + | 10221:5328-5347 | MS.gene026334:intron | 40.0% | |
| TTGTCACAATCTTACGCTCA+TGG | + | 10221:4290-4309 | MS.gene026334:CDS | 40.0% | |
| TTTGCAGGTAAGAACAAAGG+AGG | + | 10221:4191-4210 | MS.gene026334:intron | 40.0% | |
| ! | CTTAGAAGGTGGTAATGTGA+TGG | + | 10221:5342-5361 | MS.gene026334:CDS | 40.0% |
| ! | GAAGATTGCGGATTGAAGAT+TGG | + | 10221:5640-5659 | MS.gene026334:CDS | 40.0% |
| ! | GAAGGAAAAACCTTTGGCTT+GGG | - | 10221:4768-4787 | MS.gene026334:intergenic | 40.0% |
| !! | TTTGGCTTGGGTGATAGTTA+TGG | - | 10221:4756-4775 | MS.gene026334:intergenic | 40.0% |
| ACTCCCAAATGGTGCTCAAA+AGG | + | 10221:3754-3773 | MS.gene026334:CDS | 45.0% | |
| AGAACATGCATTGTGACCTC+TGG | + | 10221:4644-4663 | MS.gene026334:CDS | 45.0% | |
| CTTGTAGGTTCTATGCAGGT+TGG | + | 10221:5605-5624 | MS.gene026334:CDS | 45.0% | |
| GAACATGCCTATGAAAGTGG+AGG | + | 10221:4595-4614 | MS.gene026334:CDS | 45.0% | |
| GAGGGTTCCCAAGAAATTTG+TGG | + | 10221:3691-3710 | MS.gene026334:intron | 45.0% | |
| GTTTCAGCAGACTTAGAAGG+TGG | + | 10221:5331-5350 | MS.gene026334:intron | 45.0% | |
| TGCTTGCAGATGACCCTTTA+AGG | - | 10221:4562-4581 | MS.gene026334:intergenic | 45.0% | |
| TTCGTGCAGTTCACAAATGG+GGG | + | 10221:5538-5557 | MS.gene026334:CDS | 45.0% | |
| !! | ATAGTGCTGGCACATCTCAA+AGG | + | 10221:4020-4039 | MS.gene026334:CDS | 45.0% |
| !! | ATATTTTGGGAGGAGCGTGA+AGG | + | 10221:3779-3798 | MS.gene026334:CDS | 45.0% |
| !! | GAGGCATTGAAGGAAGTTCA+AGG | + | 10221:4932-4951 | MS.gene026334:CDS | 45.0% |
| CATGCATTGTGACCTCTGGT+TGG | + | 10221:4648-4667 | MS.gene026334:CDS | 50.0% | |
| TCGTGTGAACTCTACCTACC+CGG | + | 10221:5384-5403 | MS.gene026334:CDS | 50.0% | |
| ! | AGGAGCGTGAAGGTGATGTT+TGG | + | 10221:3789-3808 | MS.gene026334:CDS | 50.0% |
| GGCAAATGGCTTCCAACCAG+AGG | - | 10221:4663-4682 | MS.gene026334:intergenic | 55.0% | |
| GTGAACTCTACCTACCCGGT+AGG | + | 10221:5388-5407 | MS.gene026334:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10221 | gene | 3397 | 5741 | 3397 | ID=MS.gene026334 |
| 10221 | mRNA | 3397 | 5741 | 3397 | ID=MS.gene026334.t1;Parent=MS.gene026334 |
| 10221 | exon | 3397 | 3465 | 3397 | ID=MS.gene026334.t1.exon1;Parent=MS.gene026334.t1 |
| 10221 | CDS | 3397 | 3465 | 3397 | ID=cds.MS.gene026334.t1;Parent=MS.gene026334.t1 |
| 10221 | exon | 3692 | 4085 | 3692 | ID=MS.gene026334.t1.exon2;Parent=MS.gene026334.t1 |
| 10221 | CDS | 3692 | 4085 | 3692 | ID=cds.MS.gene026334.t1;Parent=MS.gene026334.t1 |
| 10221 | exon | 4198 | 4322 | 4198 | ID=MS.gene026334.t1.exon3;Parent=MS.gene026334.t1 |
| 10221 | CDS | 4198 | 4322 | 4198 | ID=cds.MS.gene026334.t1;Parent=MS.gene026334.t1 |
| 10221 | exon | 4518 | 4776 | 4518 | ID=MS.gene026334.t1.exon4;Parent=MS.gene026334.t1 |
| 10221 | CDS | 4518 | 4776 | 4518 | ID=cds.MS.gene026334.t1;Parent=MS.gene026334.t1 |
| 10221 | exon | 4887 | 4973 | 4887 | ID=MS.gene026334.t1.exon5;Parent=MS.gene026334.t1 |
| 10221 | CDS | 4887 | 4973 | 4887 | ID=cds.MS.gene026334.t1;Parent=MS.gene026334.t1 |
| 10221 | exon | 5341 | 5405 | 5341 | ID=MS.gene026334.t1.exon6;Parent=MS.gene026334.t1 |
| 10221 | CDS | 5341 | 5405 | 5341 | ID=cds.MS.gene026334.t1;Parent=MS.gene026334.t1 |
| 10221 | exon | 5490 | 5741 | 5490 | ID=MS.gene026334.t1.exon7;Parent=MS.gene026334.t1 |
| 10221 | CDS | 5490 | 5741 | 5490 | ID=cds.MS.gene026334.t1;Parent=MS.gene026334.t1 |
| Gene Sequence |
| Protein sequence |
