Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052851.t1 | KEH40804.1 | 43 | 540 | 133 | 8 | 1 | 502 | 1 | 403 | 2.10E-98 | 369.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052851.t1 | A0A072VFJ7 | 43.0 | 540 | 133 | 8 | 1 | 502 | 1 | 403 | 1.5e-98 | 369.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene052851.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052851.t1 | MTR_1g035570 | 59.504 | 242 | 91 | 3 | 263 | 502 | 167 | 403 | 2.53e-91 | 285 |
| MS.gene052851.t1 | MTR_1g035570 | 38.407 | 427 | 184 | 14 | 1 | 381 | 1 | 394 | 3.28e-74 | 240 |
| MS.gene052851.t1 | MTR_1g035640 | 47.788 | 339 | 89 | 7 | 1 | 261 | 1 | 329 | 1.22e-84 | 269 |
| MS.gene052851.t1 | MTR_1g035640 | 57.143 | 140 | 59 | 1 | 253 | 392 | 152 | 290 | 5.14e-45 | 164 |
| MS.gene052851.t1 | MTR_1g035640 | 37.405 | 131 | 51 | 2 | 364 | 494 | 366 | 465 | 2.09e-12 | 69.7 |
| MS.gene052851.t1 | MTR_1g035490 | 52.549 | 255 | 91 | 4 | 262 | 495 | 85 | 330 | 2.30e-80 | 254 |
| MS.gene052851.t1 | MTR_1g035490 | 30.952 | 294 | 165 | 10 | 107 | 380 | 52 | 327 | 2.60e-28 | 115 |
| MS.gene052851.t1 | MTR_1g035620 | 47.266 | 256 | 104 | 9 | 262 | 492 | 159 | 408 | 1.21e-58 | 199 |
| MS.gene052851.t1 | MTR_1g035620 | 33.478 | 460 | 186 | 17 | 1 | 386 | 1 | 414 | 3.56e-55 | 190 |
| MS.gene052851.t1 | MTR_6g061070 | 35.880 | 301 | 146 | 9 | 238 | 493 | 172 | 470 | 8.03e-43 | 159 |
| MS.gene052851.t1 | MTR_6g061070 | 28.070 | 456 | 226 | 18 | 14 | 380 | 27 | 469 | 6.35e-29 | 119 |
| MS.gene052851.t1 | MTR_1g050845 | 37.576 | 330 | 103 | 11 | 1 | 256 | 1 | 301 | 6.42e-42 | 160 |
| MS.gene052851.t1 | MTR_1g050845 | 45.455 | 209 | 88 | 7 | 276 | 460 | 158 | 364 | 1.54e-40 | 156 |
| MS.gene052851.t1 | MTR_1g035650 | 38.889 | 216 | 82 | 5 | 1 | 179 | 1 | 203 | 4.07e-34 | 128 |
| MS.gene052851.t1 | MTR_5g044670 | 28.077 | 260 | 126 | 6 | 14 | 226 | 25 | 270 | 2.62e-19 | 89.4 |
| MS.gene052851.t1 | MTR_5g044670 | 35.032 | 157 | 83 | 5 | 248 | 388 | 156 | 309 | 1.08e-16 | 81.6 |
| MS.gene052851.t1 | MTR_1g035480 | 33.333 | 150 | 67 | 3 | 14 | 135 | 26 | 170 | 2.01e-13 | 68.9 |
| MS.gene052851.t1 | MTR_1g035520 | 42.857 | 91 | 46 | 4 | 408 | 493 | 294 | 383 | 2.61e-13 | 72.0 |
| MS.gene052851.t1 | MTR_6g043890 | 24.615 | 260 | 144 | 8 | 13 | 228 | 23 | 274 | 3.35e-13 | 71.2 |
| MS.gene052851.t1 | MTR_1g035540 | 40.000 | 95 | 49 | 3 | 320 | 414 | 8 | 94 | 6.39e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 88 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACACCATTTGGGAATTTA+AGG | 0.129045 | 1.4:+20311305 | None:intergenic |
| GCTTGTTCTATTGTTCTTTA+AGG | 0.153282 | 1.4:-20307073 | None:intergenic |
| AAACTCTCTGGAATTGAAAA+TGG | 0.167608 | 1.4:-20307281 | MS.gene052851:CDS |
| TATTTCAAGGTTCAGATATT+TGG | 0.174943 | 1.4:-20311163 | MS.gene052851:CDS |
| AAGAACTCACCTGAGAATTT+TGG | 0.224542 | 1.4:+20310941 | None:intergenic |
| TTTGGGAATTTAAGGAATAT+TGG | 0.244109 | 1.4:+20311313 | None:intergenic |
| GTATTTGATGTTTCAATTGT+AGG | 0.254587 | 1.4:-20307112 | MS.gene052851:CDS |
| AGAAGTATGTGGAGAACTTT+TGG | 0.262295 | 1.4:-20311351 | MS.gene052851:CDS |
| GCACACTTGAACAAATTTAA+AGG | 0.264956 | 1.4:-20308383 | MS.gene052851:CDS |
| GCACACTTGAACAAATTTAA+AGG | 0.264956 | 1.4:-20309799 | MS.gene052851:CDS |
| ACGATAGTATTCATGGTTAT+AGG | 0.290213 | 1.4:-20307225 | MS.gene052851:CDS |
| AAAGTTCTCCACATACTTCT+TGG | 0.303447 | 1.4:+20311354 | None:intergenic |
| AAGCTTGGTTGCTCCCTTGA+TGG | 0.305403 | 1.4:+20308170 | None:intergenic |
| TTGGGAATTTAAGGAATATT+GGG | 0.309746 | 1.4:+20311314 | None:intergenic |
| CAATATTATCCTATGAAAAT+CGG | 0.317709 | 1.4:+20311512 | None:intergenic |
| AAGGATTTGAAGGAACTTCT+AGG | 0.319754 | 1.4:-20309390 | MS.gene052851:CDS |
| AATTATTACGATAGTATTCA+TGG | 0.354510 | 1.4:-20307232 | MS.gene052851:CDS |
| AACTCTCTGGAATTGAAAAT+GGG | 0.368127 | 1.4:-20307280 | MS.gene052851:CDS |
| GGGATTGCAAATTTAATAGT+TGG | 0.369832 | 1.4:-20309778 | MS.gene052851:CDS |
| CACACTTGAACAAATTTAAA+GGG | 0.370401 | 1.4:-20308382 | MS.gene052851:CDS |
| CACACTTGAACAAATTTAAA+GGG | 0.370401 | 1.4:-20309798 | MS.gene052851:CDS |
| CTTTCAAGACGATGATTTGT+TGG | 0.390468 | 1.4:+20309361 | None:intergenic |
| CTTTCATTAACAACTTCAAC+TGG | 0.392346 | 1.4:+20310043 | None:intergenic |
| CTCTCATTAACAACTTCAAC+TGG | 0.412647 | 1.4:+20308620 | None:intergenic |
| AATATTATCCTATGAAAATC+GGG | 0.414910 | 1.4:+20311513 | None:intergenic |
| GTTGAAGTTGTTAATGAAAG+TGG | 0.433708 | 1.4:-20310040 | MS.gene052851:CDS |
| AGCTTCAACAACTTCATCAA+TGG | 0.433788 | 1.4:+20311102 | None:intergenic |
| GGGATTGCAAATTTAAGAGT+TGG | 0.438060 | 1.4:-20308362 | MS.gene052851:CDS |
| CCAAAGGAGTTTATGAAAAG+AGG | 0.438669 | 1.4:-20307313 | MS.gene052851:CDS |
| AGTTGGTGAGGACAAGACTA+TGG | 0.440819 | 1.4:-20308345 | MS.gene052851:CDS |
| AAGTTCTCCACATACTTCTT+GGG | 0.445593 | 1.4:+20311355 | None:intergenic |
| AGTTGGTGAGGACAAGACTA+TGG | 0.446007 | 1.4:-20309761 | MS.gene052851:CDS |
| AAAGAATGCAAAGTGGAGAT+TGG | 0.446068 | 1.4:-20307175 | MS.gene052851:CDS |
| CCAAAGAGAAAAGGATTTGA+AGG | 0.447001 | 1.4:-20309400 | MS.gene052851:CDS |
| AGGAAGTCATGAAAACTCTC+TGG | 0.451275 | 1.4:-20307293 | MS.gene052851:CDS |
| GACTTACCATCCTGCATCCA+TGG | 0.457913 | 1.4:+20309969 | None:intergenic |
| AACAATAGAACAAGCAGCTA+AGG | 0.460018 | 1.4:+20307081 | None:intergenic |
| GTTATAGGTTCTCTGAAGGT+TGG | 0.464034 | 1.4:-20307210 | MS.gene052851:CDS |
| GATATTAATTTCTTTAAGCT+TGG | 0.469147 | 1.4:+20308155 | None:intergenic |
| CTTGTCCTTTGAGCTTGGGT+GGG | 0.470047 | 1.4:+20311010 | None:intergenic |
| CATAGGTGGATCATATTTCA+AGG | 0.473274 | 1.4:-20311176 | MS.gene052851:intron |
| AGAAGATCTCTTGTGACTAC+TGG | 0.477196 | 1.4:-20308293 | MS.gene052851:CDS |
| TCTTGTCCTTTGAGCTTGGG+TGG | 0.484511 | 1.4:+20311009 | None:intergenic |
| AATCTTACGCCCATGGATGC+AGG | 0.492072 | 1.4:-20309979 | MS.gene052851:CDS |
| TTTCAAGACGATGATTTGTT+GGG | 0.498866 | 1.4:+20309362 | None:intergenic |
| CCGTTACTATTACTCCATCA+AGG | 0.499776 | 1.4:-20308184 | MS.gene052851:CDS |
| TGCAAATTTAATAGTTGGTG+AGG | 0.500399 | 1.4:-20309773 | MS.gene052851:CDS |
| ATATTCCTTAAATTCCCAAA+TGG | 0.509356 | 1.4:-20311310 | MS.gene052851:CDS |
| GGTGATAATCCAAAGAGAAA+AGG | 0.509436 | 1.4:-20309409 | MS.gene052851:CDS |
| CAATTACCAGGTTATAAAGA+AGG | 0.517705 | 1.4:-20309445 | MS.gene052851:intron |
| TGCAAATTTAAGAGTTGGTG+AGG | 0.518069 | 1.4:-20308357 | MS.gene052851:CDS |
| ACTACCCAGCCAAAATTCTC+AGG | 0.537063 | 1.4:-20310950 | MS.gene052851:intron |
| ACAATAGAACAAGCAGCTAA+GGG | 0.537935 | 1.4:+20307082 | None:intergenic |
| TTACCAACATATTGCTGCCA+TGG | 0.540173 | 1.4:+20308546 | None:intergenic |
| CATGGTTATAGGTTCTCTGA+AGG | 0.540492 | 1.4:-20307214 | MS.gene052851:CDS |
| CATCCATGGGCGTAAGATTG+TGG | 0.545061 | 1.4:+20309983 | None:intergenic |
| TCCTTTGCAGGTGGGGACAG+AGG | 0.549969 | 1.4:-20310097 | MS.gene052851:intron |
| TGGATTATCACCACAAGAAG+AGG | 0.557132 | 1.4:+20309420 | None:intergenic |
| CAGAGGAGGCATGATTAAGA+AGG | 0.558194 | 1.4:-20310080 | MS.gene052851:CDS |
| GATCTCTTGTGACTACTGGT+TGG | 0.563285 | 1.4:-20308289 | MS.gene052851:CDS |
| TTAAAGAAATTAATATCGCA+AGG | 0.569842 | 1.4:-20308149 | MS.gene052851:intron |
| CAGTGGAGGCATGATTAAGA+AGG | 0.573799 | 1.4:-20308657 | MS.gene052851:CDS |
| ATAGTAACGGTGAATGAAAG+TGG | 0.574816 | 1.4:+20308197 | None:intergenic |
| TTGTCAAAATCTTACGTCCA+TGG | 0.576626 | 1.4:-20308563 | MS.gene052851:CDS |
| TACTTTGCAGGTAGGGACAG+TGG | 0.579327 | 1.4:-20308674 | MS.gene052851:intron |
| CGTCCATGGCAGCAATATGT+TGG | 0.579724 | 1.4:-20308549 | MS.gene052851:intron |
| AATTACCAGGTTATAAAGAA+GGG | 0.583013 | 1.4:-20309444 | MS.gene052851:intron |
| GTTTCTCCAGATTCAGAAGG+TGG | 0.585383 | 1.4:-20307490 | MS.gene052851:intron |
| TTGCCACAATCTTACGCCCA+TGG | 0.586417 | 1.4:-20309986 | MS.gene052851:CDS |
| CTCTCTGGAATTGAAAATGG+GGG | 0.588733 | 1.4:-20307278 | MS.gene052851:CDS |
| ACTTACCATCCTGCATCCAT+GGG | 0.589632 | 1.4:+20309970 | None:intergenic |
| GAGGATTCCCAAGAAGTATG+TGG | 0.591680 | 1.4:-20311362 | MS.gene052851:CDS |
| TGTGTTTCTCCAGATTCAGA+AGG | 0.591761 | 1.4:-20307493 | MS.gene052851:intron |
| ATATTTGCAGAATGTTCCAA+AGG | 0.598638 | 1.4:-20307329 | MS.gene052851:intron |
| AAAGAAGGAGTTGAAGTGAG+TGG | 0.599535 | 1.4:-20311067 | MS.gene052851:CDS |
| CGTTACTATTACTCCATCAA+GGG | 0.606445 | 1.4:-20308183 | MS.gene052851:CDS |
| ACTCTCTGGAATTGAAAATG+GGG | 0.608150 | 1.4:-20307279 | MS.gene052851:CDS |
| ATTCATAAAAGAATGCAAAG+TGG | 0.613826 | 1.4:-20307182 | MS.gene052851:CDS |
| AAATACCCACCCAAGCTCAA+AGG | 0.617745 | 1.4:-20311015 | MS.gene052851:CDS |
| TTTGCAGGTGGGGACAGAGG+AGG | 0.624914 | 1.4:-20310094 | MS.gene052851:intron |
| AAAGAAGGGACCTCTTCTTG+TGG | 0.632268 | 1.4:-20309430 | MS.gene052851:CDS |
| CAATAGAACAAGCAGCTAAG+GGG | 0.645203 | 1.4:+20307083 | None:intergenic |
| TGATGTGTATTCAAAATACC+CGG | 0.654603 | 1.4:-20307437 | MS.gene052851:intron |
| CCTTGATGGAGTAATAGTAA+CGG | 0.655922 | 1.4:+20308184 | None:intergenic |
| TCTCTGGAATTGAAAATGGG+GGG | 0.663804 | 1.4:-20307277 | MS.gene052851:CDS |
| TTACGCCCATGGATGCAGGA+TGG | 0.665735 | 1.4:-20309975 | MS.gene052851:intron |
| ATATTATCCTATGAAAATCG+GGG | 0.671225 | 1.4:+20311514 | None:intergenic |
| TTTGCAGGTAGGGACAGTGG+AGG | 0.713017 | 1.4:-20308671 | MS.gene052851:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTTTAATAAATAAAATG+TGG | - | chr1.4:20308740-20308759 | MS.gene052851:intron | 10.0% |
| !! | ACTAATATTTAATCAATTAT+TGG | + | chr1.4:20309324-20309343 | None:intergenic | 10.0% |
| !! | ATATATCATGATAAAAAAAT+AGG | + | chr1.4:20309796-20309815 | None:intergenic | 10.0% |
| !! | ATATTTAAAAAATGACTAAT+AGG | + | chr1.4:20309589-20309608 | None:intergenic | 10.0% |
| !! | TATATCATGATAAAAAAATA+GGG | + | chr1.4:20309795-20309814 | None:intergenic | 10.0% |
| !! | TCTTAATAAATAAAATGATA+TGG | - | chr1.4:20308395-20308414 | MS.gene052851:CDS | 10.0% |
| !!! | AGTAAAATTACTTTTTTTTT+TGG | - | chr1.4:20309838-20309857 | MS.gene052851:intron | 10.0% |
| !!! | ATCATTTTATATTTATTTTG+GGG | + | chr1.4:20309527-20309546 | None:intergenic | 10.0% |
| !!! | ATTTGTTATTATTTTCTATA+AGG | + | chr1.4:20308207-20308226 | None:intergenic | 10.0% |
| !!! | CTATCATTTTATATTTATTT+TGG | + | chr1.4:20309529-20309548 | None:intergenic | 10.0% |
| !!! | GATATGATTTAATTTTTTTT+AGG | - | chr1.4:20309609-20309628 | MS.gene052851:intron | 10.0% |
| !!! | TAAGAAAATATTCTTTTTTT+AGG | - | chr1.4:20307804-20307823 | MS.gene052851:intron | 10.0% |
| !!! | TGGTTTATTTTTTAAAAAAA+AGG | + | chr1.4:20309476-20309495 | None:intergenic | 10.0% |
| !!! | TTTGTTATTATTTTCTATAA+GGG | + | chr1.4:20308206-20308225 | None:intergenic | 10.0% |
| !!! | TTTTAAAAAATAAACCAAAA+GGG | - | chr1.4:20309479-20309498 | MS.gene052851:intron | 10.0% |
| !!! | TTTTATTTATTAAAGATTAG+TGG | + | chr1.4:20308738-20308757 | None:intergenic | 10.0% |
| !!! | TTTTGAATATGATTTAAAAA+AGG | - | chr1.4:20308132-20308151 | MS.gene052851:intron | 10.0% |
| !!! | TTTTTAAAAAATAAACCAAA+AGG | - | chr1.4:20309478-20309497 | MS.gene052851:intron | 10.0% |
| !! | AAATAAAAGTTTAGATAAGT+TGG | + | chr1.4:20309278-20309297 | None:intergenic | 15.0% |
| !! | AACATTATTTCAAAATCATT+AGG | + | chr1.4:20310862-20310881 | None:intergenic | 15.0% |
| !! | AATCAATTATTGATAAATTC+AGG | + | chr1.4:20310734-20310753 | None:intergenic | 15.0% |
| !! | AATCAATTATTGGTAAATTA+AGG | + | chr1.4:20309314-20309333 | None:intergenic | 15.0% |
| !! | AATTTATGTAATTAATGCAT+TGG | + | chr1.4:20309720-20309739 | None:intergenic | 15.0% |
| !! | ACATTATTTCAAAATCATTA+GGG | + | chr1.4:20310861-20310880 | None:intergenic | 15.0% |
| !! | ACGATTAATTACATAAAATA+TGG | - | chr1.4:20311193-20311212 | MS.gene052851:intron | 15.0% |
| !! | ATATTCAAAAAATGACTAAT+AGG | + | chr1.4:20308122-20308141 | None:intergenic | 15.0% |
| !! | ATCAATTATTGATAAATTCA+GGG | + | chr1.4:20310733-20310752 | None:intergenic | 15.0% |
| !! | ATCAATTATTGGTAAATTAA+GGG | + | chr1.4:20309313-20309332 | None:intergenic | 15.0% |
| !! | ATCATAAAATTATGATACAT+AGG | + | chr1.4:20308177-20308196 | None:intergenic | 15.0% |
| !! | CATAAATTTCAAAATCATTA+GGG | + | chr1.4:20310832-20310851 | None:intergenic | 15.0% |
| !! | CATGATATATAAATAAATGT+AGG | - | chr1.4:20309806-20309825 | MS.gene052851:CDS | 15.0% |
| !! | TCATAAAATTATGATACATA+GGG | + | chr1.4:20308176-20308195 | None:intergenic | 15.0% |
| !! | TCATAAATTTCAAAATCATT+AGG | + | chr1.4:20310833-20310852 | None:intergenic | 15.0% |
| !!! | ACTTATCAATAATTTGAAAT+AGG | + | chr1.4:20310966-20310985 | None:intergenic | 15.0% |
| !!! | AGCATTTTTAATAACAAAAA+AGG | + | chr1.4:20309072-20309091 | None:intergenic | 15.0% |
| !!! | ATATTTGGTTTCAAAAAAAT+TGG | - | chr1.4:20307357-20307376 | MS.gene052851:intron | 15.0% |
| !!! | CAAAAAAATTTACCTTTTAA+AGG | - | chr1.4:20309742-20309761 | MS.gene052851:CDS | 15.0% |
| !!! | TATTTGGTTTCAAAAAAATT+GGG | - | chr1.4:20307358-20307377 | MS.gene052851:intron | 15.0% |
| !!! | TGTTCAACAAAAAATATTTT+GGG | - | chr1.4:20307319-20307338 | MS.gene052851:CDS | 15.0% |
| !!! | TTTTTTAAAAAAAAGGTTCA+AGG | + | chr1.4:20309469-20309488 | None:intergenic | 15.0% |
| !! | AAACATAAATTTGAAAAGCA+AGG | + | chr1.4:20307694-20307713 | None:intergenic | 20.0% |
| !! | AACAAATAATTAGAGATTAG+TGG | + | chr1.4:20310158-20310177 | None:intergenic | 20.0% |
| !! | AATATTATCCTATGAAAATC+GGG | + | chr1.4:20307096-20307115 | None:intergenic | 20.0% |
| !! | AATTATTACGATAGTATTCA+TGG | - | chr1.4:20311374-20311393 | MS.gene052851:intron | 20.0% |
| !! | CAAAAATATAACTTACAAGT+TGG | - | chr1.4:20308936-20308955 | MS.gene052851:intron | 20.0% |
| !! | CAATATTATCCTATGAAAAT+CGG | + | chr1.4:20307097-20307116 | None:intergenic | 20.0% |
| !! | GACAATGTAACATAAAAAAA+AGG | + | chr1.4:20310028-20310047 | None:intergenic | 20.0% |
| !! | GATATTAATTTCTTTAAGCT+TGG | + | chr1.4:20310454-20310473 | None:intergenic | 20.0% |
| !! | TATAAAATGATAGAAACTGA+AGG | - | chr1.4:20309536-20309555 | MS.gene052851:intron | 20.0% |
| !! | TATTAACTAATGCCAAAATT+AGG | + | chr1.4:20308686-20308705 | None:intergenic | 20.0% |
| !! | TCAAAGAGAAAAGAATTTAA+AGG | - | chr1.4:20310630-20310649 | MS.gene052851:intron | 20.0% |
| !! | TCAAATTATTGATAAGTTCA+AGG | - | chr1.4:20310969-20310988 | MS.gene052851:CDS | 20.0% |
| !! | TTAAAGAAATTAATATCGCA+AGG | - | chr1.4:20310457-20310476 | MS.gene052851:intron | 20.0% |
| !!! | AAGAATTTAAAGGATTTTCT+AGG | - | chr1.4:20310640-20310659 | MS.gene052851:intron | 20.0% |
| !!! | AATTAGTAGACATTTTTAGA+TGG | + | chr1.4:20310091-20310110 | None:intergenic | 20.0% |
| !!! | ATTTTTGGAAACAATATTAG+TGG | + | chr1.4:20308709-20308728 | None:intergenic | 20.0% |
| !!! | CAACTTGTAAGTTATATTTT+TGG | + | chr1.4:20308938-20308957 | None:intergenic | 20.0% |
| !!! | CTAAAAATGTCTACTAATTT+TGG | - | chr1.4:20310092-20310111 | MS.gene052851:intron | 20.0% |
| !!! | CTAATAAAGTATCCTAATTT+TGG | - | chr1.4:20308671-20308690 | MS.gene052851:intron | 20.0% |
| !!! | CTCTTAACTTTTAAATACAT+AGG | - | chr1.4:20307413-20307432 | MS.gene052851:intron | 20.0% |
| !!! | GATTAGTGGATTTTTATTTT+TGG | + | chr1.4:20310144-20310163 | None:intergenic | 20.0% |
| !!! | GATTAGTGGTATTTTATTTT+TGG | + | chr1.4:20308724-20308743 | None:intergenic | 20.0% |
| !!! | GTGTTCAACAAAAAATATTT+TGG | - | chr1.4:20307318-20307337 | MS.gene052851:CDS | 20.0% |
| !!! | GTTTTTTGTTCTTTCTTATT+TGG | - | chr1.4:20310479-20310498 | MS.gene052851:intron | 20.0% |
| !!! | TGAAATATTTGACTTGTTTA+TGG | + | chr1.4:20309693-20309712 | None:intergenic | 20.0% |
| !!! | TTAACTTTTAAATACATAGG+TGG | - | chr1.4:20307416-20307435 | MS.gene052851:intron | 20.0% |
| !!! | TTAAGATTAATTGCAGTTTT+TGG | + | chr1.4:20308381-20308400 | None:intergenic | 20.0% |
| !!! | TTTTATATTTATTTTGGGGT+TGG | + | chr1.4:20309523-20309542 | None:intergenic | 20.0% |
| !!! | TTTTATGTAATTAATCGTAC+CGG | + | chr1.4:20311191-20311210 | None:intergenic | 20.0% |
| ! | AATATCTAAAAGCTGCATAA+TGG | - | chr1.4:20308044-20308063 | MS.gene052851:intron | 25.0% |
| ! | AATTACCAGGTTATAAAGAA+GGG | - | chr1.4:20309162-20309181 | MS.gene052851:intron | 25.0% |
| ! | ATAGTAACAAGAAATGAAAG+TGG | + | chr1.4:20308996-20309015 | None:intergenic | 25.0% |
| ! | ATATTATCCTATGAAAATCG+GGG | + | chr1.4:20307095-20307114 | None:intergenic | 25.0% |
| ! | ATATTCCTTAAATTCCCAAA+TGG | - | chr1.4:20307296-20307315 | MS.gene052851:CDS | 25.0% |
| ! | ATCGTAAAATTGTGATACTT+AGG | - | chr1.4:20308352-20308371 | MS.gene052851:CDS | 25.0% |
| ! | ATTCATAAAAGAATGCAAAG+TGG | - | chr1.4:20311424-20311443 | MS.gene052851:intron | 25.0% |
| ! | CACACTTGAACAAATTTAAA+GGG | - | chr1.4:20308808-20308827 | MS.gene052851:intron | 25.0% |
| ! | GTATTTGATGTTTCAATTGT+AGG | - | chr1.4:20311494-20311513 | MS.gene052851:intron | 25.0% |
| ! | TAAAAAATAAACCAAAAGGG+TGG | - | chr1.4:20309482-20309501 | MS.gene052851:intron | 25.0% |
| ! | TAAAATAAGCTGCATAAAGT+GGG | - | chr1.4:20308075-20308094 | MS.gene052851:intron | 25.0% |
| ! | TATTTCAAGGTTCAGATATT+TGG | - | chr1.4:20307443-20307462 | MS.gene052851:CDS | 25.0% |
| ! | TCAAAGAAATTAAAATCGCA+AGG | - | chr1.4:20309041-20309060 | MS.gene052851:intron | 25.0% |
| ! | TCGTAAAATTGTGATACTTA+GGG | - | chr1.4:20308353-20308372 | MS.gene052851:CDS | 25.0% |
| ! | TTAAAATAAGCTGCATAAAG+TGG | - | chr1.4:20308074-20308093 | MS.gene052851:intron | 25.0% |
| ! | TTCTTTATAACCTGGTAATT+GGG | + | chr1.4:20309162-20309181 | None:intergenic | 25.0% |
| ! | TTGGGAATTTAAGGAATATT+GGG | + | chr1.4:20307295-20307314 | None:intergenic | 25.0% |
| ! | TTTATGTAATTAATCGTACC+GGG | + | chr1.4:20311190-20311209 | None:intergenic | 25.0% |
| ! | TTTGGGAATTTAAGGAATAT+TGG | + | chr1.4:20307296-20307315 | None:intergenic | 25.0% |
| !! | ACATCAATCTTGAATGTTTT+AGG | + | chr1.4:20311155-20311174 | None:intergenic | 25.0% |
| !! | ATACTTTCAAGATGATTTGT+TGG | + | chr1.4:20310672-20310691 | None:intergenic | 25.0% |
| !! | GTGTAACTTTCTATTTCTTA+GGG | - | chr1.4:20308323-20308342 | MS.gene052851:CDS | 25.0% |
| !! | TATTTTCTTACATATGAGAC+TGG | + | chr1.4:20307794-20307813 | None:intergenic | 25.0% |
| !! | TGTAACTTTCTATTTCTTAG+GGG | - | chr1.4:20308324-20308343 | MS.gene052851:CDS | 25.0% |
| !!! | ATTTTTTGTTGAACACCATT+TGG | + | chr1.4:20307314-20307333 | None:intergenic | 25.0% |
| !!! | CTTATCCATTTTTGCATTTT+TGG | - | chr1.4:20308239-20308258 | MS.gene052851:CDS | 25.0% |
| !!! | TACTTTCAAGATGATTTGTT+GGG | + | chr1.4:20310671-20310690 | None:intergenic | 25.0% |
| !!! | TATTTTCTTACATTTGAGAC+CGG | - | chr1.4:20307903-20307922 | MS.gene052851:intron | 25.0% |
| !!! | TCAACAAAAAATATTTTGGG+TGG | - | chr1.4:20307322-20307341 | MS.gene052851:CDS | 25.0% |
| !!! | TTCATCAATGGATTTTATGT+TGG | + | chr1.4:20307495-20307514 | None:intergenic | 25.0% |
| !!! | TTTGCAAAGTTTCTGAAATA+TGG | - | chr1.4:20307386-20307405 | MS.gene052851:intron | 25.0% |
| !!! | TTTTTTGTTGAACACCATTT+GGG | + | chr1.4:20307313-20307332 | None:intergenic | 25.0% |
| AAAATGATAGAAACTGAAGG+AGG | - | chr1.4:20309539-20309558 | MS.gene052851:intron | 30.0% | |
| AAATGATAGAAACTGAAGGA+GGG | - | chr1.4:20309540-20309559 | MS.gene052851:intron | 30.0% | |
| AAATTGTAATATACTCCCTC+CGG | + | chr1.4:20307925-20307944 | None:intergenic | 30.0% | |
| AATTACCAGGTTATAAGGAA+GGG | - | chr1.4:20310586-20310605 | MS.gene052851:intron | 30.0% | |
| ACGATAGTATTCATGGTTAT+AGG | - | chr1.4:20311381-20311400 | MS.gene052851:intron | 30.0% | |
| AGGATACTTTATTAGCTAGT+AGG | + | chr1.4:20308666-20308685 | None:intergenic | 30.0% | |
| AGTATATTACTTTGCAGGTA+GGG | - | chr1.4:20309925-20309944 | MS.gene052851:intron | 30.0% | |
| ATATTTGCAGAATGTTCCAA+AGG | - | chr1.4:20311277-20311296 | MS.gene052851:intron | 30.0% | |
| ATCCTATAGCAAGAAAGAAA+AGG | + | chr1.4:20307733-20307752 | None:intergenic | 30.0% | |
| ATGCAAAAATGGATAAGCTT+AGG | + | chr1.4:20308236-20308255 | None:intergenic | 30.0% | |
| CAATTACCAGGTTATAAAGA+AGG | - | chr1.4:20309161-20309180 | MS.gene052851:intron | 30.0% | |
| CGTAAAATTGTGATACTTAG+GGG | - | chr1.4:20308354-20308373 | MS.gene052851:CDS | 30.0% | |
| CTTCTTTATAACCTGGTAAT+TGG | + | chr1.4:20309163-20309182 | None:intergenic | 30.0% | |
| CTTTCATTAACAACTTCAAC+TGG | + | chr1.4:20308566-20308585 | None:intergenic | 30.0% | |
| GAGAAAAAATAGTGTGGATT+TGG | - | chr1.4:20307631-20307650 | MS.gene052851:intron | 30.0% | |
| GCAAACACACATAAATGAAA+CGG | + | chr1.4:20307185-20307204 | None:intergenic | 30.0% | |
| GCACACTTGAACAAATTTAA+AGG | - | chr1.4:20308807-20308826 | MS.gene052851:intron | 30.0% | |
| GGCAATGTAACATCAAAAAA+GGG | + | chr1.4:20308605-20308624 | None:intergenic | 30.0% | |
| GGGATTGCAAATTTAATAGT+TGG | - | chr1.4:20308828-20308847 | MS.gene052851:intron | 30.0% | |
| GTAAAATTGTGATACTTAGG+GGG | - | chr1.4:20308355-20308374 | MS.gene052851:CDS | 30.0% | |
| GTTGAAGTTGTTAATGAAAG+TGG | - | chr1.4:20308566-20308585 | MS.gene052851:CDS | 30.0% | |
| TGATGAGTATATTACTTTGC+AGG | - | chr1.4:20309920-20309939 | MS.gene052851:intron | 30.0% | |
| TGATGTGTATTCAAAATACC+CGG | - | chr1.4:20311169-20311188 | MS.gene052851:CDS | 30.0% | |
| TGGCAATGTAACATCAAAAA+AGG | + | chr1.4:20308606-20308625 | None:intergenic | 30.0% | |
| TGTACATGATGAATTGAAAC+AGG | - | chr1.4:20310177-20310196 | MS.gene052851:intron | 30.0% | |
| TGTGCTCTTGAAAAATTACT+TGG | + | chr1.4:20310208-20310227 | None:intergenic | 30.0% | |
| TGTTACTATTACTCCATCAA+GGG | - | chr1.4:20309007-20309026 | MS.gene052851:intron | 30.0% | |
| TTCCTTATAACCTGGTAATT+GGG | + | chr1.4:20310586-20310605 | None:intergenic | 30.0% | |
| TTGTTACTATTACTCCATCA+AGG | - | chr1.4:20309006-20309025 | MS.gene052851:intron | 30.0% | |
| ! | AAAATATCCCCGATTTTCAT+AGG | - | chr1.4:20307085-20307104 | MS.gene052851:CDS | 30.0% |
| ! | ATCATTTCAAAGTTCTAGCT+AGG | - | chr1.4:20310907-20310926 | MS.gene052851:intron | 30.0% |
| ! | GGTGTAACTTTCTATTTCTT+AGG | - | chr1.4:20308322-20308341 | MS.gene052851:CDS | 30.0% |
| ! | TCATTTCAAAGTTCTAGCTA+GGG | - | chr1.4:20310908-20310927 | MS.gene052851:intron | 30.0% |
| ! | TGCAAATTTAATAGTTGGTG+AGG | - | chr1.4:20308833-20308852 | MS.gene052851:intron | 30.0% |
| !! | AAACTCTCTGGAATTGAAAA+TGG | - | chr1.4:20311325-20311344 | MS.gene052851:CDS | 30.0% |
| !! | AACTCTCTGGAATTGAAAAT+GGG | - | chr1.4:20311326-20311345 | MS.gene052851:CDS | 30.0% |
| !! | CACTCTTTAAGACCTTTAAA+AGG | + | chr1.4:20309757-20309776 | None:intergenic | 30.0% |
| !! | TGCATTGACTTGATCAAAAT+TGG | + | chr1.4:20308274-20308293 | None:intergenic | 30.0% |
| !! | TTGCAAATGAACTCTAAAGT+AGG | - | chr1.4:20309887-20309906 | MS.gene052851:intron | 30.0% |
| !! | TTTCAAGACGATGATTTGTT+GGG | + | chr1.4:20309247-20309266 | None:intergenic | 30.0% |
| !!! | TTTTGAAATTCTTGTTGCAG+AGG | - | chr1.4:20307225-20307244 | MS.gene052851:CDS | 30.0% |
| AAAGAATGCAAAGTGGAGAT+TGG | - | chr1.4:20311431-20311450 | MS.gene052851:intron | 35.0% | |
| AAAGTTCTCCACATACTTCT+TGG | + | chr1.4:20307255-20307274 | None:intergenic | 35.0% | |
| AACAATAGAACAAGCAGCTA+AGG | + | chr1.4:20311528-20311547 | None:intergenic | 35.0% | |
| AAGGATTTGAAGGAACTTCT+AGG | - | chr1.4:20309216-20309235 | MS.gene052851:intron | 35.0% | |
| AAGTTCTCCACATACTTCTT+GGG | + | chr1.4:20307254-20307273 | None:intergenic | 35.0% | |
| AATGATAGAAACTGAAGGAG+GGG | - | chr1.4:20309541-20309560 | MS.gene052851:intron | 35.0% | |
| ACAATAGAACAAGCAGCTAA+GGG | + | chr1.4:20311527-20311546 | None:intergenic | 35.0% | |
| AGCTTCAACAACTTCATCAA+TGG | + | chr1.4:20307507-20307526 | None:intergenic | 35.0% | |
| ATAGTAACGGTGAATGAAAG+TGG | + | chr1.4:20310412-20310431 | None:intergenic | 35.0% | |
| ATCCCAATTACCAGGTTATA+AGG | - | chr1.4:20309157-20309176 | MS.gene052851:intron | 35.0% | |
| ATGCTTAAAGAATGTCTCAG+AGG | + | chr1.4:20309651-20309670 | None:intergenic | 35.0% | |
| ATTCTTTGATCCCAATTACC+AGG | - | chr1.4:20310573-20310592 | MS.gene052851:intron | 35.0% | |
| CAATTACCAGGTTATAAGGA+AGG | - | chr1.4:20310585-20310604 | MS.gene052851:intron | 35.0% | |
| CATAGGTGGATCATATTTCA+AGG | - | chr1.4:20307430-20307449 | MS.gene052851:intron | 35.0% | |
| CCAAAGAGAAAAGGATTTGA+AGG | - | chr1.4:20309206-20309225 | MS.gene052851:intron | 35.0% | |
| CCAAAGGAGTTTATGAAAAG+AGG | - | chr1.4:20311293-20311312 | MS.gene052851:CDS | 35.0% | |
| CCACCTATTTCAATTCATCA+TGG | + | chr1.4:20308767-20308786 | None:intergenic | 35.0% | |
| CCATGATGAATTGAAATAGG+TGG | - | chr1.4:20308764-20308783 | MS.gene052851:intron | 35.0% | |
| CCTTGATGGAGTAATAGTAA+CGG | + | chr1.4:20309009-20309028 | None:intergenic | 35.0% | |
| CGTTACTATTACTCCATCAA+GGG | - | chr1.4:20310423-20310442 | MS.gene052851:intron | 35.0% | |
| CTCTCATTAACAACTTCAAC+TGG | + | chr1.4:20309989-20310008 | None:intergenic | 35.0% | |
| CTTCCTTATAACCTGGTAAT+TGG | + | chr1.4:20310587-20310606 | None:intergenic | 35.0% | |
| GAACACCATTTGGGAATTTA+AGG | + | chr1.4:20307304-20307323 | None:intergenic | 35.0% | |
| GAGGACCAAAAATGCAAAAA+TGG | + | chr1.4:20308247-20308266 | None:intergenic | 35.0% | |
| GAGTATATTACTTTGCAGGT+AGG | - | chr1.4:20309924-20309943 | MS.gene052851:intron | 35.0% | |
| GCTACAGAAAAAGCTAAAGA+AGG | - | chr1.4:20307524-20307543 | MS.gene052851:intron | 35.0% | |
| GCTCAAAGGACAAGAAAAAA+TGG | - | chr1.4:20307605-20307624 | MS.gene052851:intron | 35.0% | |
| GGGATCAAAGAAAAAGAAGT+TGG | + | chr1.4:20309142-20309161 | None:intergenic | 35.0% | |
| GGGATTGCAAATTTAAGAGT+TGG | - | chr1.4:20310244-20310263 | MS.gene052851:intron | 35.0% | |
| GGTCCATGATGAATTGAAAT+AGG | - | chr1.4:20308761-20308780 | MS.gene052851:intron | 35.0% | |
| GGTGATAATCCAAAGAGAAA+AGG | - | chr1.4:20309197-20309216 | MS.gene052851:intron | 35.0% | |
| TGAATTATCACCACAAGAAG+AGG | + | chr1.4:20310613-20310632 | None:intergenic | 35.0% | |
| TGACTTGATCAAAATTGGTC+TGG | + | chr1.4:20308269-20308288 | None:intergenic | 35.0% | |
| TGATGAGTATATTCCTTTGC+AGG | - | chr1.4:20308497-20308516 | MS.gene052851:intron | 35.0% | |
| TGGCAAGAGAAAAAATAGTG+TGG | - | chr1.4:20307625-20307644 | MS.gene052851:intron | 35.0% | |
| TGTGCTCTTGAAAAATCACT+TGG | + | chr1.4:20308792-20308811 | None:intergenic | 35.0% | |
| TTCTTACATATGAGACTGGA+GGG | + | chr1.4:20307790-20307809 | None:intergenic | 35.0% | |
| TTGTCAAAATCTTACGTCCA+TGG | - | chr1.4:20310043-20310062 | MS.gene052851:CDS | 35.0% | |
| TTTCTTACATATGAGACTGG+AGG | + | chr1.4:20307791-20307810 | None:intergenic | 35.0% | |
| TTTCTTTGATCCCAATTACC+AGG | - | chr1.4:20309149-20309168 | MS.gene052851:intron | 35.0% | |
| ! | AAGAACTCACCTGAGAATTT+TGG | + | chr1.4:20307668-20307687 | None:intergenic | 35.0% |
| ! | CCTCTTTTCATAAACTCCTT+TGG | + | chr1.4:20311296-20311315 | None:intergenic | 35.0% |
| ! | CCTTCAAATCCTTTTCTCTT+TGG | + | chr1.4:20309209-20309228 | None:intergenic | 35.0% |
| ! | CTTTCAAGACGATGATTTGT+TGG | + | chr1.4:20309248-20309267 | None:intergenic | 35.0% |
| ! | TGCATTGACCCAATCAAAAT+TGG | - | chr1.4:20308428-20308447 | MS.gene052851:intron | 35.0% |
| ! | TGGAGAGTAATGGAGATATT+TGG | - | chr1.4:20307342-20307361 | MS.gene052851:intron | 35.0% |
| ! | TTTTCTTGTCCTTTGAGCTT+GGG | + | chr1.4:20307603-20307622 | None:intergenic | 35.0% |
| ! | TTTTTCTTGTCCTTTGAGCT+TGG | + | chr1.4:20307604-20307623 | None:intergenic | 35.0% |
| !! | AAAGGTCTTAAAGAGTGTCT+CGG | - | chr1.4:20309760-20309779 | MS.gene052851:CDS | 35.0% |
| !! | ACTCTCTGGAATTGAAAATG+GGG | - | chr1.4:20311327-20311346 | MS.gene052851:CDS | 35.0% |
| !! | AGAAGTATGTGGAGAACTTT+TGG | - | chr1.4:20307255-20307274 | MS.gene052851:CDS | 35.0% |
| !! | ATATTTTGGGTGGAGAGTAA+TGG | - | chr1.4:20307332-20307351 | MS.gene052851:intron | 35.0% |
| !! | CTCCTTTTCTTTCTTGCTAT+AGG | - | chr1.4:20307728-20307747 | MS.gene052851:intron | 35.0% |
| !! | TATGTGGAGAACTTTTGGAA+AGG | - | chr1.4:20307260-20307279 | MS.gene052851:CDS | 35.0% |
| !! | TGCAAATTTAAGAGTTGGTG+AGG | - | chr1.4:20310249-20310268 | MS.gene052851:intron | 35.0% |
| AAAGAAGGAGTTGAAGTGAG+TGG | - | chr1.4:20307539-20307558 | MS.gene052851:intron | 40.0% | |
| ACATTACCACCTTCTGAATC+TGG | + | chr1.4:20311125-20311144 | None:intergenic | 40.0% | |
| AGAAGATCTCTTGTGACTAC+TGG | - | chr1.4:20310313-20310332 | MS.gene052851:intron | 40.0% | |
| AGGAAGTCATGAAAACTCTC+TGG | - | chr1.4:20311313-20311332 | MS.gene052851:CDS | 40.0% | |
| AGTATATTCCTTTGCAGGTG+GGG | - | chr1.4:20308502-20308521 | MS.gene052851:intron | 40.0% | |
| ATAAGCTGCATAAAGTGGGA+AGG | - | chr1.4:20308079-20308098 | MS.gene052851:intron | 40.0% | |
| CAATAGAACAAGCAGCTAAG+GGG | + | chr1.4:20311526-20311545 | None:intergenic | 40.0% | |
| CATGGTTATAGGTTCTCTGA+AGG | - | chr1.4:20311392-20311411 | MS.gene052851:intron | 40.0% | |
| CCGTTACTATTACTCCATCA+AGG | - | chr1.4:20310422-20310441 | MS.gene052851:intron | 40.0% | |
| GAGTATATTCCTTTGCAGGT+GGG | - | chr1.4:20308501-20308520 | MS.gene052851:intron | 40.0% | |
| GTTAAATGACTTCCAACCAG+TGG | + | chr1.4:20308916-20308935 | None:intergenic | 40.0% | |
| TGACCCAATCAAAATTGGTC+TGG | - | chr1.4:20308433-20308452 | MS.gene052851:intron | 40.0% | |
| TGAGTATATTCCTTTGCAGG+TGG | - | chr1.4:20308500-20308519 | MS.gene052851:intron | 40.0% | |
| TGATTGGGTCAATGCATACT+TGG | + | chr1.4:20308424-20308443 | None:intergenic | 40.0% | |
| TGGATTATCACCACAAGAAG+AGG | + | chr1.4:20309189-20309208 | None:intergenic | 40.0% | |
| TGTGTTTCTCCAGATTCAGA+AGG | - | chr1.4:20311113-20311132 | MS.gene052851:CDS | 40.0% | |
| TTACCAACATATTGCTGCCA+TGG | + | chr1.4:20310063-20310082 | None:intergenic | 40.0% | |
| ! | AGGGTCAAAAGTGTAAAAGG+GGG | - | chr1.4:20308456-20308475 | MS.gene052851:intron | 40.0% |
| ! | CCAATCAAAATTGGTCTGGA+GGG | - | chr1.4:20308437-20308456 | MS.gene052851:intron | 40.0% |
| ! | CTTGATCAAAATTGGTCTGG+AGG | + | chr1.4:20308266-20308285 | None:intergenic | 40.0% |
| ! | GAGGGTCAAAAGTGTAAAAG+GGG | - | chr1.4:20308455-20308474 | MS.gene052851:intron | 40.0% |
| ! | GGAGGGTCAAAAGTGTAAAA+GGG | - | chr1.4:20308454-20308473 | MS.gene052851:intron | 40.0% |
| ! | GTTATAGGTTCTCTGAAGGT+TGG | - | chr1.4:20311396-20311415 | MS.gene052851:intron | 40.0% |
| ! | TCAAAGTTCTAGCTAGGGTA+GGG | - | chr1.4:20310913-20310932 | MS.gene052851:intron | 40.0% |
| ! | TGGAGGGTCAAAAGTGTAAA+AGG | - | chr1.4:20308453-20308472 | MS.gene052851:intron | 40.0% |
| ! | TTCAAAGTTCTAGCTAGGGT+AGG | - | chr1.4:20310912-20310931 | MS.gene052851:intron | 40.0% |
| ! | TTCTTACATTTGAGACCGGA+GGG | - | chr1.4:20307907-20307926 | MS.gene052851:intron | 40.0% |
| ! | TTTCTTACATTTGAGACCGG+AGG | - | chr1.4:20307906-20307925 | MS.gene052851:intron | 40.0% |
| !! | CTCTCTGGAATTGAAAATGG+GGG | - | chr1.4:20311328-20311347 | MS.gene052851:CDS | 40.0% |
| !! | TCTCTGGAATTGAAAATGGG+GGG | - | chr1.4:20311329-20311348 | MS.gene052851:CDS | 40.0% |
| !!! | AGAAGATCTGTTTTGACCAC+TGG | - | chr1.4:20308897-20308916 | MS.gene052851:intron | 40.0% |
| !!! | CCTCCAGACCAATTTTGATT+GGG | + | chr1.4:20308439-20308458 | None:intergenic | 40.0% |
| AAAGAAGGGACCTCTTCTTG+TGG | - | chr1.4:20309176-20309195 | MS.gene052851:intron | 45.0% | |
| AAATACCCACCCAAGCTCAA+AGG | - | chr1.4:20307591-20307610 | MS.gene052851:intron | 45.0% | |
| AACCAAAAGGGTGGTAGCAA+AGG | - | chr1.4:20309491-20309510 | MS.gene052851:intron | 45.0% | |
| ACTACCCAGCCAAAATTCTC+AGG | - | chr1.4:20307656-20307675 | MS.gene052851:intron | 45.0% | |
| ACTTACCATCCTGCATCCAT+GGG | + | chr1.4:20308639-20308658 | None:intergenic | 45.0% | |
| CACCAACGTCACTTAAAGTG+AGG | - | chr1.4:20308301-20308320 | MS.gene052851:CDS | 45.0% | |
| CACCTCACTTTAAGTGACGT+TGG | + | chr1.4:20308306-20308325 | None:intergenic | 45.0% | |
| GAGGTCCCTTCTTTATAACC+TGG | + | chr1.4:20309170-20309189 | None:intergenic | 45.0% | |
| GATCTCTTGTGACTACTGGT+TGG | - | chr1.4:20310317-20310336 | MS.gene052851:intron | 45.0% | |
| GTTTCTCCAGATTCAGAAGG+TGG | - | chr1.4:20311116-20311135 | MS.gene052851:CDS | 45.0% | |
| TAGAAACTGAAGGAGGGGAA+AGG | - | chr1.4:20309546-20309565 | MS.gene052851:intron | 45.0% | |
| ! | CAGAGGAGGCATGATTAAGA+AGG | - | chr1.4:20308526-20308545 | MS.gene052851:intron | 45.0% |
| ! | CAGTGGAGGCATGATTAAGA+AGG | - | chr1.4:20309949-20309968 | MS.gene052851:intron | 45.0% |
| ! | CCCAATCAAAATTGGTCTGG+AGG | - | chr1.4:20308436-20308455 | MS.gene052851:intron | 45.0% |
| ! | GAGGATTCCCAAGAAGTATG+TGG | - | chr1.4:20307244-20307263 | MS.gene052851:CDS | 45.0% |
| !! | ACTCACCTGAGAATTTTGGC+TGG | + | chr1.4:20307664-20307683 | None:intergenic | 45.0% |
| !! | AGTTGGTGAGGACAAGACTA+TGG | - | chr1.4:20308845-20308864 | MS.gene052851:intron | 45.0% |
| !! | CCCTCCAGACCAATTTTGAT+TGG | + | chr1.4:20308440-20308459 | None:intergenic | 45.0% |
| !!! | CTCACCTGAGAATTTTGGCT+GGG | + | chr1.4:20307663-20307682 | None:intergenic | 45.0% |
| !!! | GATCTGTTTTGACCACTGGT+TGG | - | chr1.4:20308901-20308920 | MS.gene052851:intron | 45.0% |
| !! | ATATAAATTTATTTAAGAAA+AGG | + | chr1.4:20311054-20311073 | None:intergenic | 5.0% |
| !!! | AAACTTTTATTTTTTTAATT+TGG | - | chr1.4:20309286-20309305 | MS.gene052851:intron | 5.0% |
| !!! | ATATGATTTAATTTTTTTTA+GGG | - | chr1.4:20309610-20309629 | MS.gene052851:intron | 5.0% |
| !!! | TATCATTTTATATTTATTTT+GGG | + | chr1.4:20309528-20309547 | None:intergenic | 5.0% |
| AAGCTTGGTTGCTCCCTTGA+TGG | + | chr1.4:20310439-20310458 | None:intergenic | 50.0% | |
| AAGGAAGGGACCTCTTCTTG+TGG | - | chr1.4:20310600-20310619 | MS.gene052851:intron | 50.0% | |
| AATCTTACGCCCATGGATGC+AGG | - | chr1.4:20308627-20308646 | MS.gene052851:CDS | 50.0% | |
| CATCCATGGGCGTAAGATTG+TGG | + | chr1.4:20308626-20308645 | None:intergenic | 50.0% | |
| CGTCCATGGCAGCAATATGT+TGG | - | chr1.4:20310057-20310076 | MS.gene052851:CDS | 50.0% | |
| CTTGTCCTTTGAGCTTGGGT+GGG | + | chr1.4:20307599-20307618 | None:intergenic | 50.0% | |
| GACTTACCATCCTGCATCCA+TGG | + | chr1.4:20308640-20308659 | None:intergenic | 50.0% | |
| GAGCTTGATTGCTCCCTTGA+TGG | + | chr1.4:20309023-20309042 | None:intergenic | 50.0% | |
| GAGGTCCCTTCCTTATAACC+TGG | + | chr1.4:20310594-20310613 | None:intergenic | 50.0% | |
| TACTTTGCAGGTAGGGACAG+TGG | - | chr1.4:20309932-20309951 | MS.gene052851:intron | 50.0% | |
| TCTTGTCCTTTGAGCTTGGG+TGG | + | chr1.4:20307600-20307619 | None:intergenic | 50.0% | |
| TGAAAATGGGGGGACGATCA+TGG | - | chr1.4:20311339-20311358 | MS.gene052851:CDS | 50.0% | |
| TTGCCACAATCTTACGCCCA+TGG | - | chr1.4:20308620-20308639 | MS.gene052851:CDS | 50.0% | |
| ! | CACCTTTGCTACCACCCTTT+TGG | + | chr1.4:20309496-20309515 | None:intergenic | 50.0% |
| TTACGCCCATGGATGCAGGA+TGG | - | chr1.4:20308631-20308650 | MS.gene052851:CDS | 55.0% | |
| TTTGCAGGTAGGGACAGTGG+AGG | - | chr1.4:20309935-20309954 | MS.gene052851:intron | 55.0% | |
| TCCTCTGTCCCCACCTGCAA+AGG | + | chr1.4:20308513-20308532 | None:intergenic | 60.0% | |
| TCCTTTGCAGGTGGGGACAG+AGG | - | chr1.4:20308509-20308528 | MS.gene052851:intron | 60.0% | |
| TTTGCAGGTGGGGACAGAGG+AGG | - | chr1.4:20308512-20308531 | MS.gene052851:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 20307075 | 20311553 | 20307075 | ID=MS.gene052851 |
| chr1.4 | mRNA | 20307075 | 20311553 | 20307075 | ID=MS.gene052851.t1;Parent=MS.gene052851 |
| chr1.4 | exon | 20311497 | 20311553 | 20311497 | ID=MS.gene052851.t1.exon1;Parent=MS.gene052851.t1 |
| chr1.4 | CDS | 20311497 | 20311553 | 20311497 | ID=cds.MS.gene052851.t1;Parent=MS.gene052851.t1 |
| chr1.4 | exon | 20311281 | 20311383 | 20311281 | ID=MS.gene052851.t1.exon2;Parent=MS.gene052851.t1 |
| chr1.4 | CDS | 20311281 | 20311383 | 20311281 | ID=cds.MS.gene052851.t1;Parent=MS.gene052851.t1 |
| chr1.4 | exon | 20310951 | 20311193 | 20310951 | ID=MS.gene052851.t1.exon3;Parent=MS.gene052851.t1 |
| chr1.4 | CDS | 20310951 | 20311193 | 20310951 | ID=cds.MS.gene052851.t1;Parent=MS.gene052851.t1 |
| chr1.4 | exon | 20309976 | 20310109 | 20309976 | ID=MS.gene052851.t1.exon4;Parent=MS.gene052851.t1 |
| chr1.4 | CDS | 20309976 | 20310109 | 20309976 | ID=cds.MS.gene052851.t1;Parent=MS.gene052851.t1 |
| chr1.4 | exon | 20309710 | 20309845 | 20309710 | ID=MS.gene052851.t1.exon5;Parent=MS.gene052851.t1 |
| chr1.4 | CDS | 20309710 | 20309845 | 20309710 | ID=cds.MS.gene052851.t1;Parent=MS.gene052851.t1 |
| chr1.4 | exon | 20309362 | 20309457 | 20309362 | ID=MS.gene052851.t1.exon6;Parent=MS.gene052851.t1 |
| chr1.4 | CDS | 20309362 | 20309457 | 20309362 | ID=cds.MS.gene052851.t1;Parent=MS.gene052851.t1 |
| chr1.4 | exon | 20308550 | 20308686 | 20308550 | ID=MS.gene052851.t1.exon7;Parent=MS.gene052851.t1 |
| chr1.4 | CDS | 20308550 | 20308686 | 20308550 | ID=cds.MS.gene052851.t1;Parent=MS.gene052851.t1 |
| chr1.4 | exon | 20308150 | 20308429 | 20308150 | ID=MS.gene052851.t1.exon8;Parent=MS.gene052851.t1 |
| chr1.4 | CDS | 20308150 | 20308429 | 20308150 | ID=cds.MS.gene052851.t1;Parent=MS.gene052851.t1 |
| chr1.4 | exon | 20307438 | 20307502 | 20307438 | ID=MS.gene052851.t1.exon9;Parent=MS.gene052851.t1 |
| chr1.4 | CDS | 20307438 | 20307502 | 20307438 | ID=cds.MS.gene052851.t1;Parent=MS.gene052851.t1 |
| chr1.4 | exon | 20307075 | 20307341 | 20307075 | ID=MS.gene052851.t1.exon10;Parent=MS.gene052851.t1 |
| chr1.4 | CDS | 20307075 | 20307341 | 20307075 | ID=cds.MS.gene052851.t1;Parent=MS.gene052851.t1 |
| Gene Sequence |
| Protein sequence |
