AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041025

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041025.t1 MTR_6g061070 68.421 456 95 7 210 623 18 466 0.0 594
MS.gene041025.t1 MTR_6g061070 69.141 256 70 2 1 256 62 308 8.41e-112 344
MS.gene041025.t1 MTR_1g035520 48.089 314 124 8 225 514 85 383 7.31e-75 245
MS.gene041025.t1 MTR_1g035520 75.758 132 25 2 1 125 116 247 2.30e-53 188
MS.gene041025.t1 MTR_1g035520 79.167 96 20 0 528 623 284 379 6.13e-47 170
MS.gene041025.t1 MTR_1g035570 35.176 398 226 10 228 622 21 389 9.26e-64 216
MS.gene041025.t1 MTR_1g035570 30.804 224 125 9 3 222 51 248 1.42e-13 73.6
MS.gene041025.t1 MTR_1g033740 65.605 157 34 2 227 380 37 176 2.36e-62 206
MS.gene041025.t1 MTR_1g033740 62.500 136 29 2 1 131 66 184 1.10e-47 166
MS.gene041025.t1 MTR_1g035480 64.557 158 32 2 227 380 32 169 1.07e-60 201
MS.gene041025.t1 MTR_1g035480 65.152 132 20 2 1 126 61 172 6.69e-47 164
MS.gene041025.t1 MTR_1g035620 35.392 421 207 13 228 623 25 405 5.62e-60 206
MS.gene041025.t1 MTR_1g035620 32.157 255 128 8 3 256 55 265 6.86e-21 95.9
MS.gene041025.t1 MTR_1g035500 60.759 158 41 2 227 380 40 180 1.64e-58 195
MS.gene041025.t1 MTR_1g035500 62.121 132 27 2 1 126 69 183 1.66e-46 163
MS.gene041025.t1 MTR_1g035510 58.333 156 46 2 227 380 1 139 9.41e-54 184
MS.gene041025.t1 MTR_1g035510 59.375 128 31 2 1 124 30 140 2.91e-39 144
MS.gene041025.t1 MTR_1g035640 39.474 304 148 8 228 527 21 292 2.04e-52 187
MS.gene041025.t1 MTR_1g035640 32.443 262 123 10 3 256 51 266 3.64e-19 91.3
MS.gene041025.t1 MTR_1g035470 63.194 144 29 2 227 367 1 123 1.42e-51 175
MS.gene041025.t1 MTR_1g035470 58.015 131 28 3 1 126 30 138 4.53e-38 138
MS.gene041025.t1 MTR_1g050845 29.698 431 223 12 228 630 25 403 2.02e-40 158
MS.gene041025.t1 MTR_1g050845 30.385 260 122 9 3 260 55 257 1.23e-12 71.6
MS.gene041025.t1 MTR_1g035490 37.872 235 113 9 413 622 97 323 4.78e-36 139
MS.gene041025.t1 MTR_1g035540 65.094 106 32 2 448 553 3 103 2.25e-35 130
MS.gene041025.t1 MTR_1g035650 38.537 205 94 5 228 429 25 200 7.30e-33 125
MS.gene041025.t1 MTR_1g035650 36.723 177 78 6 3 176 55 200 5.47e-20 89.4
MS.gene041025.t1 MTR_5g044670 29.393 313 179 10 227 526 31 314 1.78e-32 128
MS.gene041025.t1 MTR_5g044670 23.333 270 153 10 1 256 60 289 3.76e-11 65.5
MS.gene041025.t1 MTR_1g108780 28.527 319 198 12 224 531 9 308 3.75e-29 121
MS.gene041025.t1 MTR_1g108780 21.947 524 292 19 1 514 41 457 5.17e-17 84.7
MS.gene041025.t1 MTR_7g050590 28.956 297 190 7 227 517 1 282 1.96e-27 113
MS.gene041025.t1 MTR_3g098790 30.565 301 172 12 227 517 28 301 2.23e-27 114
MS.gene041025.t1 MTR_7g050720 32.353 306 169 14 227 514 25 310 5.42e-27 112
MS.gene041025.t1 MTR_8g103940 25.275 455 260 17 228 622 55 489 5.53e-26 112
MS.gene041025.t1 MTR_7g050580 28.859 298 172 11 227 517 28 292 6.65e-26 109
MS.gene041025.t1 MTR_7g050710 28.667 300 185 10 228 517 29 309 3.69e-25 107
MS.gene041025.t1 MTR_7g050560 27.703 296 178 6 227 517 28 292 9.96e-24 102
MS.gene041025.t1 MTR_1g035460 26.384 307 198 9 227 520 1 292 1.82e-23 103
MS.gene041025.t1 MTR_4g119990 28.115 313 193 13 228 527 31 324 3.67e-23 102
MS.gene041025.t1 MTR_3g061370 27.609 297 165 9 228 513 23 280 4.71e-22 97.1
MS.gene041025.t1 MTR_6g043890 29.643 280 168 12 228 499 31 289 6.50e-22 97.8
MS.gene041025.t1 MTR_3g061350 28.475 295 165 11 228 513 26 283 1.32e-21 95.9
MS.gene041025.t1 MTR_3g061320 27.645 293 167 12 228 514 26 279 1.54e-21 95.5
MS.gene041025.t1 MTR_3g061310 27.304 293 172 12 228 513 26 284 8.36e-21 93.6
MS.gene041025.t1 MTR_3g061340 27.055 292 165 12 228 514 26 274 2.55e-20 92.0
MS.gene041025.t1 MTR_3g061290 36.885 122 71 4 228 343 26 147 2.43e-15 75.5
MS.gene041025.t1 MTR_3g061330 36.111 144 78 5 228 359 26 167 7.90e-15 75.1
MS.gene041025.t1 MTR_1g035440 45.238 84 42 2 228 307 31 114 5.95e-13 69.7
MS.gene041025.t1 MTR_1g021330 24.768 323 201 14 216 501 29 346 7.72e-13 71.2
MS.gene041025.t1 MTR_3g061220 37.755 98 50 3 228 324 26 113 4.22e-12 63.9
MS.gene041025.t1 MTR_1g021360 25.733 307 164 14 220 501 189 456 2.67e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041025.t1 AT3G18990 25.078 319 198 12 228 512 22 333 1.09e-17 85.5
MS.gene041025.t1 AT3G18990 25.078 319 198 12 228 512 22 333 1.58e-17 85.5

Find 115 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATTTGTCGTGTATATT+TGG 0.129032 1.2:+19725835 None:intergenic
TATGATCAACATCTCGATTA+TGG 0.186232 1.2:-19725601 MS.gene041025:CDS
TTATCGCCATATCACATTAA+AGG 0.212066 1.2:-19726706 MS.gene041025:CDS
GGGCATGGTTCCTTTGTGGC+TGG 0.290615 1.2:+19726085 None:intergenic
TATATTGGATGATAGTAGTT+TGG 0.295324 1.2:-19727321 MS.gene041025:CDS
TATATTGGATGATAGTAGTT+TGG 0.295324 1.2:-19730194 MS.gene041025:CDS
TTATAACCTTTAATGTGATA+TGG 0.297550 1.2:+19726700 None:intergenic
TACAACGCGGGGACGATGTT+TGG 0.345270 1.2:-19727433 MS.gene041025:CDS
GGTCTGAGTTCAAAATGAAT+TGG 0.350012 1.2:-19727457 MS.gene041025:CDS
GGTCTGAGTTCAAAATGAAT+TGG 0.350012 1.2:-19730330 None:intergenic
TACAACGCGGTGACGATGTT+TGG 0.370214 1.2:-19730306 MS.gene041025:CDS
TATATTCAGTGGAAATTTAG+TGG 0.370449 1.2:-19725665 MS.gene041025:CDS
TTATAACCTTCAATGTGATA+TGG 0.376198 1.2:+19729571 None:intergenic
CTCTGGGCATGGTTCCTTTG+TGG 0.384680 1.2:+19726081 None:intergenic
AATCTGACCCTCCTTTGTAT+TGG 0.385935 1.2:+19727354 None:intergenic
AATCTGACCCTCCTTTGTAT+TGG 0.385935 1.2:+19730227 None:intergenic
GGCATGGTTCCTTTGTGGCT+GGG 0.402651 1.2:+19726086 None:intergenic
ACGATGTTTGGCTTCAGAAT+TGG 0.404471 1.2:-19727421 MS.gene041025:CDS
ACGATGTTTGGCTTCAGAAC+TGG 0.404512 1.2:-19730294 MS.gene041025:CDS
ATGATCAACATCTCGATTAT+GGG 0.408633 1.2:-19725600 MS.gene041025:CDS
CATTAAAGGTTATAATAGAT+TGG 0.414338 1.2:-19726692 MS.gene041025:intron
CATTGAAGGTTATAATAGAT+TGG 0.414338 1.2:-19729563 MS.gene041025:intron
GAAATACCTTGAAACTGCTC+TGG 0.423422 1.2:+19726064 None:intergenic
AGAGATTGCAAAGTGAAGAT+TGG 0.426674 1.2:-19725547 MS.gene041025:CDS
TAGAACTTCTACTCTGACAT+AGG 0.428464 1.2:-19725367 MS.gene041025:CDS
TATTCTTTCGAAAACCATCT+AGG 0.429204 1.2:+19726322 None:intergenic
TATTCTTTCGAAAACCATCT+AGG 0.429204 1.2:+19729174 None:intergenic
AAATATACACGACAAATTCA+AGG 0.441825 1.2:-19725833 MS.gene041025:CDS
TGTTCAAAATCATGTGTTCA+AGG 0.447991 1.2:-19725497 MS.gene041025:intron
TGCATGGCAGTGTCCCAATC+TGG 0.451263 1.2:-19724477 MS.gene041025:intron
TTAGAAGTGTTGGTGAGGAC+AGG 0.455257 1.2:-19726267 MS.gene041025:CDS
TTAGAAGTGTTGGTGAGGAC+AGG 0.455257 1.2:-19729119 MS.gene041025:CDS
GTCTGAGTTCAAAATGAATT+GGG 0.455385 1.2:-19727456 MS.gene041025:CDS
GTCTGAGTTCAAAATGAATT+GGG 0.455385 1.2:-19730329 None:intergenic
ACCACCAGATTGAACCAGAT+TGG 0.456767 1.2:+19724463 None:intergenic
TTATCGCCATATCACATTGA+AGG 0.463256 1.2:-19729577 MS.gene041025:CDS
CTAATAGAAACTGTGGAGGC+CGG 0.465574 1.2:-19726825 MS.gene041025:CDS
CTAATAGAAACTGTGGAGGC+CGG 0.465574 1.2:-19729696 MS.gene041025:CDS
ATAGTAATTGTGAATGAAAG+TGG 0.468831 1.2:+19726112 None:intergenic
AAGGAACATGACTTGAAAGT+TGG 0.470859 1.2:-19726169 MS.gene041025:CDS
TGTCTCTCTACGAATTTCCT+TGG 0.471061 1.2:+19727524 None:intergenic
GTGGAGTTGAAAGTAGAAGA+AGG 0.483404 1.2:-19725646 MS.gene041025:CDS
TAATAGAAACTGTGGAGGCC+GGG 0.483673 1.2:-19726824 MS.gene041025:CDS
TAATAGAAACTGTGGAGGCC+GGG 0.483673 1.2:-19729695 MS.gene041025:CDS
TGTCCCAATCTGGTTCAATC+TGG 0.486675 1.2:-19724467 MS.gene041025:CDS
GATTATGGGTGGTTCACTAA+AGG 0.487439 1.2:-19725586 MS.gene041025:CDS
TGTCTCTTCAACAGCTCACT+TGG 0.493789 1.2:+19725691 None:intergenic
TGAAACAGATAATACCTAGA+TGG 0.494737 1.2:-19726336 MS.gene041025:intron
TGAAACAGATAATACCTAGA+TGG 0.494737 1.2:-19729188 MS.gene041025:intron
TCACAAATTATCATCCCAAT+GGG 0.508213 1.2:-19726750 MS.gene041025:CDS
TCACAAATTATCATCCCAAT+GGG 0.508213 1.2:-19729621 MS.gene041025:CDS
TTGCCAATGTTTGTCCCTTG+AGG 0.510253 1.2:+19730010 None:intergenic
ATCTGGTGGTGTATTGACCT+TGG 0.512647 1.2:-19724450 MS.gene041025:CDS
TTCACAAATTATCATCCCAA+TGG 0.514529 1.2:-19726751 MS.gene041025:CDS
TTCACAAATTATCATCCCAA+TGG 0.514529 1.2:-19729622 MS.gene041025:CDS
CCACCAGATTGAACCAGATT+GGG 0.515307 1.2:+19724464 None:intergenic
ACATCGCTTAGACTTCCAAA+TGG 0.515725 1.2:-19727479 MS.gene041025:CDS
CCATGCCCAGAGCAGTTTCA+AGG 0.516067 1.2:-19726070 MS.gene041025:intron
TTGCCAACGTTTGTCCCTTG+AGG 0.522524 1.2:+19727131 None:intergenic
GGAAATTCGTAGAGAGACAT+TGG 0.530097 1.2:-19727520 MS.gene041025:CDS
TTTGGAAGTCTAAGCGATGT+TGG 0.531226 1.2:+19727482 None:intergenic
TTTGGCTTCAGAACTGGAAG+AGG 0.532764 1.2:-19730288 MS.gene041025:CDS
CCTTGAAACTGCTCTGGGCA+TGG 0.538312 1.2:+19726070 None:intergenic
CAATGATGAACAAGAAGCTA+AGG 0.539148 1.2:-19730146 MS.gene041025:CDS
AAGTCTAAGCGATGTTGGAT+TGG 0.540289 1.2:+19727487 None:intergenic
AAATGAATTGGGTACAACGC+GGG 0.543695 1.2:-19727445 MS.gene041025:CDS
GATAATTTGACTGTGAAACT+AGG 0.548697 1.2:+19729595 None:intergenic
TGAAAGTAGAAGAAGGAACA+TGG 0.550721 1.2:-19725639 MS.gene041025:CDS
ATTTCTTAGCTTTCTTACCC+CGG 0.551754 1.2:+19726806 None:intergenic
ATTTCTTAGCTTTCTTACCC+CGG 0.551754 1.2:+19729677 None:intergenic
AATAGAAACTGTGGAGGCCG+GGG 0.552110 1.2:-19726823 MS.gene041025:CDS
AATAGAAACTGTGGAGGCCG+GGG 0.552110 1.2:-19729694 MS.gene041025:CDS
ACTAGTGCTGCTACACCTCA+AGG 0.555707 1.2:-19727146 MS.gene041025:CDS
ACTAGTGCTGCTACACCTCA+AGG 0.555707 1.2:-19730025 MS.gene041025:CDS
CATCGCTTAGACTTCCAAAT+GGG 0.555762 1.2:-19727478 MS.gene041025:CDS
ATGGGTGGTTCACTAAAGGT+TGG 0.558127 1.2:-19725582 MS.gene041025:CDS
TGTTCTTGCAGATGATTCCA+AGG 0.559130 1.2:-19727541 MS.gene041025:intron
GTGAAACTAGGACTCCCATT+GGG 0.561306 1.2:+19729607 None:intergenic
TAGAAGTGTTGGTGAGGACA+GGG 0.562489 1.2:-19726266 MS.gene041025:CDS
TAGAAGTGTTGGTGAGGACA+GGG 0.562489 1.2:-19729118 MS.gene041025:CDS
CCCAATCTGGTTCAATCTGG+TGG 0.563398 1.2:-19724464 MS.gene041025:CDS
GATAATTTGACAGTGAAACT+AGG 0.566923 1.2:+19726724 None:intergenic
CTCACCAACACTTCTAATTG+TGG 0.571224 1.2:+19726273 None:intergenic
CTCACCAACACTTCTAATTG+TGG 0.571224 1.2:+19729125 None:intergenic
AAGGCCACAATTAGAAGTGT+TGG 0.571434 1.2:-19726277 MS.gene041025:CDS
AAGGCCACAATTAGAAGTGT+TGG 0.571434 1.2:-19729129 MS.gene041025:CDS
GTGAAACTAGGACTCCCATT+GGG 0.573485 1.2:+19726736 None:intergenic
ACACCTCAAGGGACAAACAT+TGG 0.575666 1.2:-19730013 MS.gene041025:CDS
AAGAGACATAATATATTCAG+TGG 0.578343 1.2:-19725676 MS.gene041025:CDS
AGAAGGAACATGGTTTGTAG+AGG 0.583705 1.2:-19725629 MS.gene041025:CDS
TTTGCACGCTCTCTCAGATG+TGG 0.586381 1.2:-19727392 MS.gene041025:CDS
TTTGCGCGCTCTCTCAGATG+TGG 0.586381 1.2:-19730265 MS.gene041025:CDS
AGTGAAACTAGGACTCCCAT+TGG 0.586614 1.2:+19726735 None:intergenic
AAATACCTTGAAACTGCTCT+GGG 0.589681 1.2:+19726065 None:intergenic
TGTGAAACTAGGACTCCCAT+TGG 0.594223 1.2:+19729606 None:intergenic
TTTGGCTTCAGAATTGGAAG+CGG 0.599388 1.2:-19727415 MS.gene041025:CDS
CACAATTAGAAGTGTTGGTG+AGG 0.602624 1.2:-19726272 MS.gene041025:CDS
CACAATTAGAAGTGTTGGTG+AGG 0.602624 1.2:-19729124 MS.gene041025:CDS
AATGAATTGGGTACAACGCG+GGG 0.622066 1.2:-19727444 MS.gene041025:CDS
ATCAACATCTCGATTATGGG+TGG 0.637974 1.2:-19725597 MS.gene041025:CDS
GCAGAGGCTAATAGAAACTG+TGG 0.644824 1.2:-19726832 MS.gene041025:intron
GCAGAGGCTAATAGAAACTG+TGG 0.644824 1.2:-19729703 MS.gene041025:CDS
TACTATTATCCCAGCCACAA+AGG 0.646969 1.2:-19726095 MS.gene041025:CDS
GAATGAGTTATTGCAACAGA+AGG 0.647927 1.2:-19726296 MS.gene041025:CDS
GAATGAGTTATTGCAACAGA+AGG 0.647927 1.2:-19729148 MS.gene041025:CDS
GTGTTGGTGAGGACAGGGCA+TGG 0.648324 1.2:-19726261 MS.gene041025:CDS
GTGTTGGTGAGGACAGGGCA+TGG 0.648324 1.2:-19729113 MS.gene041025:CDS
CTAGTGCTGCTACACCTCAA+GGG 0.659036 1.2:-19727145 MS.gene041025:CDS
CTAGTGCTGCTACACCTCAA+GGG 0.659036 1.2:-19730024 MS.gene041025:CDS
AAAATGAATTGGGTACAACG+CGG 0.679839 1.2:-19727446 MS.gene041025:CDS
TCATTCAATGATGAAAACCA+AGG 0.684534 1.2:+19724433 None:intergenic
ACACCTCAAGGGACAAACGT+TGG 0.688941 1.2:-19727134 MS.gene041025:CDS
GAGGCTAATAGAAACTGTGG+AGG 0.696340 1.2:-19726829 MS.gene041025:CDS
GAGGCTAATAGAAACTGTGG+AGG 0.696340 1.2:-19729700 MS.gene041025:CDS
AAAATGAATTGGGTACAACG+CGG 0.771281 1.2:-19730319 MS.gene041025:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATATTTTAAAAAAATA+AGG + chr1.2:19725939-19725958 None:intergenic 0.0%
!! AGTTTATTCAATAATTAAAT+TGG + chr1.2:19726421-19726440 None:intergenic 10.0%
!! GTTTATTCAATAATTAAATT+GGG + chr1.2:19726420-19726439 None:intergenic 10.0%
!!! TTTAGGTATATTTTAATTAT+TGG - chr1.2:19725468-19725487 MS.gene041025:intron 10.0%
!! AGGAAAAAAATTAAAAATTC+TGG + chr1.2:19725919-19725938 None:intergenic 15.0%
!! ATTCTTATAATAATTGAGAA+TGG - chr1.2:19726865-19726884 MS.gene041025:intron 15.0%
!! CTTAGTTCATTAATAATTAT+CGG - chr1.2:19729724-19729743 MS.gene041025:intron 15.0%
!!! TACTGATTTATTATCATTAA+CGG - chr1.2:19726620-19726639 MS.gene041025:intron 15.0%
!!! TATTGAATAAACTTTGTTAT+TGG - chr1.2:19726428-19726447 MS.gene041025:intron 15.0%
!!! TTATTATTTTGAGATTCTTA+AGG - chr1.2:19730088-19730107 MS.gene041025:CDS 15.0%
!! AAAAAATACGTAAATACAGT+GGG + chr1.2:19727779-19727798 None:intergenic 20.0%
!! AATGATAATAAATCAGTACA+TGG + chr1.2:19726618-19726637 None:intergenic 20.0%
!! AATTTGTATGCATTAAAAAG+TGG + chr1.2:19724850-19724869 None:intergenic 20.0%
!! ACATTGACAAAAATGTTATT+AGG - chr1.2:19724816-19724835 MS.gene041025:intron 20.0%
!! ATTATCAAAATTATGTGTTC+AGG - chr1.2:19729527-19729546 MS.gene041025:intron 20.0%
!! CATTAAAGGTTATAATAGAT+TGG - chr1.2:19728057-19728076 MS.gene041025:intron 20.0%
!! TAAAAAATACGTAAATACAG+CGG + chr1.2:19724909-19724928 None:intergenic 20.0%
!! TAAAAAATACGTAAATACAG+TGG + chr1.2:19724909-19724928 None:intergenic 20.0%
!! TATTTACAAGAGAAACATTT+GGG + chr1.2:19725317-19725336 None:intergenic 20.0%
!! TTATAACCTTTAATGTGATA+TGG + chr1.2:19728052-19728071 None:intergenic 20.0%
!! TTATCAAAATTATGTGTTCA+GGG - chr1.2:19729528-19729547 MS.gene041025:intron 20.0%
!! TTTATTATCATTAACGGAAT+TGG - chr1.2:19726626-19726645 MS.gene041025:intron 20.0%
!! TTTGGGTGTAAAATATAAAT+TGG - chr1.2:19726109-19726128 MS.gene041025:CDS 20.0%
!!! ACATTGACAAAAATGTTTTT+AGG - chr1.2:19727695-19727714 MS.gene041025:intron 20.0%
!!! AGATTTTCATGTCATTATAT+TGG - chr1.2:19724540-19724559 MS.gene041025:intron 20.0%
!!! ATAAGTTGAATACATAAGAA+AGG + chr1.2:19730147-19730166 None:intergenic 20.0%
!!! ATCATCTGTAACAAATTTTA+AGG - chr1.2:19728768-19728787 MS.gene041025:intron 20.0%
!!! CATATGTTTTTAAACAATTC+TGG + chr1.2:19726085-19726104 None:intergenic 20.0%
!!! TTAAAAACATATGACGTTTT+GGG - chr1.2:19726092-19726111 MS.gene041025:CDS 20.0%
!!! TTATAATTGCTTTGATTTGA+TGG - chr1.2:19726501-19726520 MS.gene041025:intron 20.0%
!!! TTTAAAAACATATGACGTTT+TGG - chr1.2:19726091-19726110 MS.gene041025:CDS 20.0%
! AAAAAATACGTAAATACAGC+GGG + chr1.2:19724908-19724927 None:intergenic 25.0%
! AAATATACACGACAAATTCA+AGG - chr1.2:19728916-19728935 MS.gene041025:intron 25.0%
! AAGAGACATAATATATTCAG+TGG - chr1.2:19729073-19729092 MS.gene041025:CDS 25.0%
! AAGTAACAATAGAGACATTT+AGG - chr1.2:19725451-19725470 MS.gene041025:intron 25.0%
! AATCGAAAGAATGAATGAAA+TGG + chr1.2:19726327-19726346 None:intergenic 25.0%
! AATGCACAAAAACTAAAGAT+AGG - chr1.2:19725092-19725111 MS.gene041025:intron 25.0%
! AATTGAAGCAATTGTATTGT+GGG + chr1.2:19726145-19726164 None:intergenic 25.0%
! AATTGGGTCAATGATTAAAA+TGG + chr1.2:19726404-19726423 None:intergenic 25.0%
! ACTAACAGAAAACATATTCA+AGG - chr1.2:19725355-19725374 MS.gene041025:intron 25.0%
! AGTAGTATGTTTACATTACA+TGG + chr1.2:19728810-19728829 None:intergenic 25.0%
! AGTATGTGATTGTATTTGTT+GGG - chr1.2:19729992-19730011 MS.gene041025:CDS 25.0%
! ATAGTAATTGTGAATGAAAG+TGG + chr1.2:19725788-19725807 None:intergenic 25.0%
! ATTGGGTCAATGATTAAAAT+GGG + chr1.2:19726403-19726422 None:intergenic 25.0%
! ATTTACAAGAGAAACATTTG+GGG + chr1.2:19725316-19725335 None:intergenic 25.0%
! CATTGAAGGTTATAATAGAT+TGG - chr1.2:19725186-19725205 MS.gene041025:intron 25.0%
! CTATTTACAAGAGAAACATT+TGG + chr1.2:19725318-19725337 None:intergenic 25.0%
! TATATTCAGTGGAAATTTAG+TGG - chr1.2:19729084-19729103 MS.gene041025:CDS 25.0%
! TATATTGGATGATAGTAGTT+TGG - chr1.2:19724555-19724574 MS.gene041025:intron 25.0%
! TTATAACCTTCAATGTGATA+TGG + chr1.2:19725181-19725200 None:intergenic 25.0%
! TTATAAGATTACCTTAGGAA+TGG - chr1.2:19729969-19729988 MS.gene041025:CDS 25.0%
! TTGAATTTGTCGTGTATATT+TGG + chr1.2:19728917-19728936 None:intergenic 25.0%
! TTGAGTTATAAGATTACCTT+AGG - chr1.2:19729964-19729983 MS.gene041025:intron 25.0%
!! TTGATTTTCTTTTTCTTGAG+AGG + chr1.2:19724688-19724707 None:intergenic 25.0%
!! TTGATTTTCTTTTTCTTGAG+GGG + chr1.2:19724688-19724707 None:intergenic 25.0%
!! TTTTTACAATCACTCACAAT+TGG - chr1.2:19729351-19729370 MS.gene041025:intron 25.0%
!!! AGTTGATTTTCTTTTTCTTG+AGG + chr1.2:19724690-19724709 None:intergenic 25.0%
!!! CTTTTAGTTTTCCAATACAA+AGG - chr1.2:19724511-19724530 MS.gene041025:intron 25.0%
!!! GGTGAAAAACATTGATTTTA+CGG + chr1.2:19730123-19730142 None:intergenic 25.0%
!!! GTTGATTTTCTTTTTCTTGA+GGG + chr1.2:19724689-19724708 None:intergenic 25.0%
!!! TAGTTTTTAAAGTTTTGCAG+AGG - chr1.2:19725030-19725049 MS.gene041025:intron 25.0%
!!! TTCACGTCTTGATTTTTTTA+TGG + chr1.2:19727835-19727854 None:intergenic 25.0%
AAATAGACCACTTAAAGAGT+TGG + chr1.2:19726709-19726728 None:intergenic 30.0%
AGTTGAATACATAAGAAAGG+TGG + chr1.2:19730144-19730163 None:intergenic 30.0%
ATAAGTATATGTAACGTGCA+TGG + chr1.2:19725502-19725521 None:intergenic 30.0%
ATCTAGGTATTATCTGTTTC+AGG + chr1.2:19725562-19725581 None:intergenic 30.0%
ATGAATGCAAAGTGAAGATT+AGG - chr1.2:19729479-19729498 MS.gene041025:intron 30.0%
ATGATCAACATCTCGATTAT+GGG - chr1.2:19729149-19729168 MS.gene041025:CDS 30.0%
ATTCACAAAGTTGAATGGTT+TGG + chr1.2:19726255-19726274 None:intergenic 30.0%
CAAATGTTCTTCTAAACATC+TGG + chr1.2:19729289-19729308 None:intergenic 30.0%
CAATTAGGTACAAATATTGC+TGG + chr1.2:19728105-19728124 None:intergenic 30.0%
CATACATCAAGTGATTAATG+CGG + chr1.2:19727137-19727156 None:intergenic 30.0%
CATATGCTTGACTTATAATG+TGG - chr1.2:19727027-19727046 MS.gene041025:intron 30.0%
CTCTTTAAGTGGTCTATTTA+AGG - chr1.2:19726710-19726729 MS.gene041025:CDS 30.0%
GAATACGAAGATTTGAATGT+TGG - chr1.2:19726458-19726477 MS.gene041025:intron 30.0%
GAATTGAAGCAATTGTATTG+TGG + chr1.2:19726146-19726165 None:intergenic 30.0%
GACATAAGGTAATCACATTT+AGG - chr1.2:19729928-19729947 MS.gene041025:intron 30.0%
GAGTATGTGATTGTATTTGT+TGG - chr1.2:19729991-19730010 MS.gene041025:CDS 30.0%
GATAATTTGACAGTGAAACT+AGG + chr1.2:19728028-19728047 None:intergenic 30.0%
GATAATTTGACTGTGAAACT+AGG + chr1.2:19725157-19725176 None:intergenic 30.0%
GTCTGAGTTCAAAATGAATT+GGG - chr1.2:19727293-19727312 MS.gene041025:CDS 30.0%
TATGATCAACATCTCGATTA+TGG - chr1.2:19729148-19729167 MS.gene041025:CDS 30.0%
TATTCTTTCGAAAACCATCT+AGG + chr1.2:19725578-19725597 None:intergenic 30.0%
TCACAAATTATCATCCCAAT+GGG - chr1.2:19725128-19725147 MS.gene041025:intron 30.0%
TCATTCAATGATGAAAACCA+AGG + chr1.2:19730319-19730338 None:intergenic 30.0%
TGAAACAGATAATACCTAGA+TGG - chr1.2:19725561-19725580 MS.gene041025:CDS 30.0%
TGTTCAAAATCATGTGTTCA+AGG - chr1.2:19729252-19729271 MS.gene041025:intron 30.0%
TTATCGCCATATCACATTAA+AGG - chr1.2:19728043-19728062 MS.gene041025:intron 30.0%
TTCACAAATTATCATCCCAA+TGG - chr1.2:19725127-19725146 MS.gene041025:intron 30.0%
TTTGTACCTAATTGTGTAAG+AGG - chr1.2:19728111-19728130 MS.gene041025:intron 30.0%
! CATCATGAAAACAGTATTGA+GGG + chr1.2:19726762-19726781 None:intergenic 30.0%
! GTTCACGTCTTGATTTTTAA+TGG + chr1.2:19724964-19724983 None:intergenic 30.0%
! TAGTTTTCCAATACAAAGGA+GGG - chr1.2:19724515-19724534 MS.gene041025:intron 30.0%
! TGGGTATTTTCATGATCATT+CGG + chr1.2:19724661-19724680 None:intergenic 30.0%
! TTTTAGCGTTGTGACAAATT+TGG - chr1.2:19729858-19729877 MS.gene041025:intron 30.0%
! TTTTGTAACATCATTCGACA+AGG - chr1.2:19728940-19728959 MS.gene041025:intron 30.0%
!! AGAGGCTTTCATTTTTCTAT+AGG - chr1.2:19725261-19725280 MS.gene041025:intron 30.0%
!! TAATTGCTTTGATTTGATGG+AGG - chr1.2:19726504-19726523 MS.gene041025:intron 30.0%
!! TAGTGCATGTTTTTAATCCT+AGG - chr1.2:19727753-19727772 MS.gene041025:intron 30.0%
!! TTAGTTTTCCAATACAAAGG+AGG - chr1.2:19724514-19724533 MS.gene041025:intron 30.0%
AAAATGAATTGGGTACAACG+CGG - chr1.2:19727303-19727322 MS.gene041025:CDS 35.0%
AAATACCTTGAAACTGCTCT+GGG + chr1.2:19728687-19728706 None:intergenic 35.0%
AAGGAACATGACTTGAAAGT+TGG - chr1.2:19725728-19725747 MS.gene041025:intron 35.0%
AATCACATACTCCATTCCTA+AGG + chr1.2:19729983-19730002 None:intergenic 35.0%
ACAATAGAGCAAGAATGACT+AGG + chr1.2:19726807-19726826 None:intergenic 35.0%
ACATTCTTCTTCACAAATGG+AGG - chr1.2:19730228-19730247 MS.gene041025:CDS 35.0%
AGAGATTGCAAAGTGAAGAT+TGG - chr1.2:19729202-19729221 MS.gene041025:intron 35.0%
AGCACTCATATTTCATAGAG+TGG + chr1.2:19729629-19729648 None:intergenic 35.0%
ATCACCAAATACCACTACAA+TGG + chr1.2:19730027-19730046 None:intergenic 35.0%
ATGTCCTTTCAACAACACTA+TGG - chr1.2:19730173-19730192 MS.gene041025:CDS 35.0%
ATGTTGCATACTTGCTTATC+TGG - chr1.2:19726528-19726547 MS.gene041025:intron 35.0%
ATTCTACACATTCACACACA+TGG + chr1.2:19729002-19729021 None:intergenic 35.0%
CAATGATGAACAAGAAGCTA+AGG - chr1.2:19724603-19724622 MS.gene041025:intron 35.0%
CAGTTAGGTACAAATATTGC+TGG + chr1.2:19725237-19725256 None:intergenic 35.0%
CATTCAACTTTGTGAATTGC+AGG - chr1.2:19726258-19726277 MS.gene041025:CDS 35.0%
CCATCATGAAAACAGTATTG+AGG + chr1.2:19726763-19726782 None:intergenic 35.0%
CGAACATTCTTCTTCACAAA+TGG - chr1.2:19730225-19730244 MS.gene041025:CDS 35.0%
CTGATTAAGCAAACTGTGTT+CGG + chr1.2:19727064-19727083 None:intergenic 35.0%
CTGCAATTCACAAAGTTGAA+TGG + chr1.2:19726260-19726279 None:intergenic 35.0%
GAATGAGTTATTGCAACAGA+AGG - chr1.2:19725601-19725620 MS.gene041025:CDS 35.0%
GGTCTGAGTTCAAAATGAAT+TGG - chr1.2:19727292-19727311 MS.gene041025:CDS 35.0%
TAGAACTTCTACTCTGACAT+AGG - chr1.2:19729382-19729401 MS.gene041025:intron 35.0%
TCAATGTCAAGTGTTCACTA+TGG - chr1.2:19726196-19726215 MS.gene041025:CDS 35.0%
TCTTGTATTAGTGCTATGCA+TGG - chr1.2:19726974-19726993 MS.gene041025:intron 35.0%
TGAAAGCCTCTTACACAATT+AGG + chr1.2:19728120-19728139 None:intergenic 35.0%
TGAAAGTAGAAGAAGGAACA+TGG - chr1.2:19729110-19729129 MS.gene041025:CDS 35.0%
TTATCGCCATATCACATTGA+AGG - chr1.2:19725172-19725191 MS.gene041025:intron 35.0%
TTTGTACCTAACTGTGTAAG+AGG - chr1.2:19725243-19725262 MS.gene041025:intron 35.0%
! AGAAGAAGCTAAGTTGAGAA+TGG + chr1.2:19726299-19726318 None:intergenic 35.0%
! ATTGTAGTGGTATTTGGTGA+TGG - chr1.2:19730026-19730045 MS.gene041025:CDS 35.0%
! ATTTCTTAGCTTTCTTACCC+CGG + chr1.2:19725075-19725094 None:intergenic 35.0%
! ATTTTGAACTCAGACCCATT+TGG + chr1.2:19727288-19727307 None:intergenic 35.0%
! CCTCAATACTGTTTTCATGA+TGG - chr1.2:19726760-19726779 MS.gene041025:CDS 35.0%
! CTTTTTCTTGAGAGGTTGTT+TGG + chr1.2:19727559-19727578 None:intergenic 35.0%
! GATTGTATTTGTTGGGAAGT+AGG - chr1.2:19729999-19730018 MS.gene041025:CDS 35.0%
! GTATTATCTGTTTCAGGTCA+TGG + chr1.2:19725556-19725575 None:intergenic 35.0%
! TGGTTTTCTTAGGAACTTTG+TGG - chr1.2:19726548-19726567 MS.gene041025:intron 35.0%
! TTGGCATTTTCATGGTCATT+CGG + chr1.2:19727540-19727559 None:intergenic 35.0%
! TTGTAGTGGTATTTGGTGAT+GGG - chr1.2:19730027-19730046 MS.gene041025:CDS 35.0%
!! AGCAGTTTTATAATGCAGGT+TGG - chr1.2:19725689-19725708 MS.gene041025:CDS 35.0%
!! AGTTCTGAAACTCAAGAACA+AGG + chr1.2:19726843-19726862 None:intergenic 35.0%
!! CAAGAGCAGTTTTATAATGC+AGG - chr1.2:19725685-19725704 MS.gene041025:CDS 35.0%
!! GACTGCATGTTTTTAATCCT+AGG - chr1.2:19724882-19724901 MS.gene041025:intron 35.0%
!! TGGTTGGAAGTCATTTTCAA+AGG - chr1.2:19725709-19725728 MS.gene041025:intron 35.0%
!!! CTTGCTTATCTGGTTTTCTT+AGG - chr1.2:19726538-19726557 MS.gene041025:intron 35.0%
!!! GTTTTATAATGCAGGTTGGT+TGG - chr1.2:19725693-19725712 MS.gene041025:CDS 35.0%
AAATGAATTGGGTACAACGC+GGG - chr1.2:19727304-19727323 MS.gene041025:CDS 40.0%
AAGTCTAAGCGATGTTGGAT+TGG + chr1.2:19727265-19727284 None:intergenic 40.0%
AATCTGACCCTCCTTTGTAT+TGG + chr1.2:19724525-19724544 None:intergenic 40.0%
ACATCGCTTAGACTTCCAAA+TGG - chr1.2:19727270-19727289 MS.gene041025:CDS 40.0%
ATCAACATCTCGATTATGGG+TGG - chr1.2:19729152-19729171 MS.gene041025:CDS 40.0%
CACACACATGGCTATGTTAA+TGG + chr1.2:19728990-19729009 None:intergenic 40.0%
CATCGCTTAGACTTCCAAAT+GGG - chr1.2:19727271-19727290 MS.gene041025:CDS 40.0%
CTCACCAACACTTCTAATTG+TGG + chr1.2:19725627-19725646 None:intergenic 40.0%
GAAATACCTTGAAACTGCTC+TGG + chr1.2:19728688-19728707 None:intergenic 40.0%
GACATAATCCGAGATATGTG+TGG + chr1.2:19729900-19729919 None:intergenic 40.0%
GATTACCTTATGTCAAGCGT+TGG + chr1.2:19729922-19729941 None:intergenic 40.0%
GATTATGGGTGGTTCACTAA+AGG - chr1.2:19729163-19729182 MS.gene041025:CDS 40.0%
GCATCCTTGCAAAAAGTTTC+AGG - chr1.2:19724781-19724800 MS.gene041025:intron 40.0%
GGAAATTCGTAGAGAGACAT+TGG - chr1.2:19727229-19727248 MS.gene041025:CDS 40.0%
GGTCATACCAACTCTTTAAG+TGG - chr1.2:19726699-19726718 MS.gene041025:CDS 40.0%
GTGGAGTTGAAAGTAGAAGA+AGG - chr1.2:19729103-19729122 MS.gene041025:CDS 40.0%
GTGGCTGATGATAACAACAA+AGG - chr1.2:19730056-19730075 MS.gene041025:CDS 40.0%
TACTATTATCCCAGCCACAA+AGG - chr1.2:19728654-19728673 MS.gene041025:intron 40.0%
TATGTCCAACGCTTGACATA+AGG - chr1.2:19729914-19729933 MS.gene041025:intron 40.0%
TGAAAGCCTCTTACACAGTT+AGG + chr1.2:19725252-19725271 None:intergenic 40.0%
TGCATACTTGCTTATCTGCA+TGG - chr1.2:19730256-19730275 MS.gene041025:CDS 40.0%
TGTCTCTCTACGAATTTCCT+TGG + chr1.2:19727228-19727247 None:intergenic 40.0%
TGTTCTTGCAGATGATTCCA+AGG - chr1.2:19727208-19727227 MS.gene041025:CDS 40.0%
TTAGTGCTATGCATGGCTTT+AGG - chr1.2:19726981-19727000 MS.gene041025:intron 40.0%
TTCAACAACACTATGGACGT+GGG - chr1.2:19730180-19730199 MS.gene041025:CDS 40.0%
TTTCAACAACACTATGGACG+TGG - chr1.2:19730179-19730198 MS.gene041025:CDS 40.0%
TTTGGAAGTCTAAGCGATGT+TGG + chr1.2:19727270-19727289 None:intergenic 40.0%
! AAGGCCACAATTAGAAGTGT+TGG - chr1.2:19725620-19725639 MS.gene041025:CDS 40.0%
! ACGATGTTTGGCTTCAGAAT+TGG - chr1.2:19727328-19727347 MS.gene041025:CDS 40.0%
! ACGTCCATAGTGTTGTTGAA+AGG + chr1.2:19730180-19730199 None:intergenic 40.0%
! ACTTGCCTGAAACTTTTTGC+AGG + chr1.2:19724789-19724808 None:intergenic 40.0%
! AGAAGGAACATGGTTTGTAG+AGG - chr1.2:19729120-19729139 MS.gene041025:CDS 40.0%
! CTTGCCTGAAACTTTTTGCA+AGG + chr1.2:19724788-19724807 None:intergenic 40.0%
! CTTGCCTGAAACTTTTTGCA+GGG + chr1.2:19724788-19724807 None:intergenic 40.0%
! CTTTTTCTTGAGGGGTTGTT+GGG + chr1.2:19724680-19724699 None:intergenic 40.0%
! GAGGTTGTTTGGCATTTTCA+TGG + chr1.2:19727548-19727567 None:intergenic 40.0%
! GGAACTTTGTGGTTTTCACA+TGG - chr1.2:19726559-19726578 MS.gene041025:intron 40.0%
! TCTTTTTCTTGAGGGGTTGT+TGG + chr1.2:19724681-19724700 None:intergenic 40.0%
! TTTGGCTTCAGAATTGGAAG+CGG - chr1.2:19727334-19727353 MS.gene041025:CDS 40.0%
!! ATTTGGTGATGGGGTATTTG+TGG - chr1.2:19730037-19730056 MS.gene041025:CDS 40.0%
!! CACAATTAGAAGTGTTGGTG+AGG - chr1.2:19725625-19725644 MS.gene041025:CDS 40.0%
!! TGTAGTGGTATTTGGTGATG+GGG - chr1.2:19730028-19730047 MS.gene041025:CDS 40.0%
AATGAATTGGGTACAACGCG+GGG - chr1.2:19727305-19727324 MS.gene041025:CDS 45.0%
ACACCTCAAGGGACAAACAT+TGG - chr1.2:19724736-19724755 MS.gene041025:intron 45.0%
ACCAAGTGATTGAGCACTAG+TGG + chr1.2:19726682-19726701 None:intergenic 45.0%
ACCACCAGATTGAACCAGAT+TGG + chr1.2:19730289-19730308 None:intergenic 45.0%
ACCACTAGTGCTCAATCACT+TGG - chr1.2:19726678-19726697 MS.gene041025:intron 45.0%
AGTGAAACTAGGACTCCCAT+TGG + chr1.2:19728017-19728036 None:intergenic 45.0%
ATGCTACGCCACACATATCT+CGG - chr1.2:19729889-19729908 MS.gene041025:intron 45.0%
ATGGGTGGTTCACTAAAGGT+TGG - chr1.2:19729167-19729186 MS.gene041025:CDS 45.0%
CAAGTGTTCACTATGGACGT+GGG - chr1.2:19726203-19726222 MS.gene041025:CDS 45.0%
CCACCAGATTGAACCAGATT+GGG + chr1.2:19730288-19730307 None:intergenic 45.0%
CTAATAGAAACTGTGGAGGC+CGG - chr1.2:19725053-19725072 MS.gene041025:intron 45.0%
GAGGCTAATAGAAACTGTGG+AGG - chr1.2:19725049-19725068 MS.gene041025:intron 45.0%
GATATGTGTGGCGTAGCATT+TGG + chr1.2:19729888-19729907 None:intergenic 45.0%
GCAGAGGCTAATAGAAACTG+TGG - chr1.2:19725046-19725065 MS.gene041025:intron 45.0%
GCATCCCTGCAAAAAGTTTC+AGG - chr1.2:19727660-19727679 MS.gene041025:intron 45.0%
GGAGCCATTGTAGTGGTATT+TGG - chr1.2:19730020-19730039 MS.gene041025:CDS 45.0%
GTGAAACTAGGACTCCCATT+GGG + chr1.2:19725145-19725164 None:intergenic 45.0%
TAATAGAAACTGTGGAGGCC+GGG - chr1.2:19725054-19725073 MS.gene041025:intron 45.0%
TACGTAAATACAGTGGGCCT+AGG + chr1.2:19727773-19727792 None:intergenic 45.0%
TCAAGTGTTCACTATGGACG+TGG - chr1.2:19726202-19726221 MS.gene041025:CDS 45.0%
TGTCTCTTCAACAGCTCACT+TGG + chr1.2:19729061-19729080 None:intergenic 45.0%
TGTGAAACTAGGACTCCCAT+TGG + chr1.2:19725146-19725165 None:intergenic 45.0%
TTGCCAATGTTTGTCCCTTG+AGG + chr1.2:19724742-19724761 None:intergenic 45.0%
! ACGATGTTTGGCTTCAGAAC+TGG - chr1.2:19724455-19724474 MS.gene041025:CDS 45.0%
! ATCTGGTGGTGTATTGACCT+TGG - chr1.2:19730299-19730318 MS.gene041025:CDS 45.0%
! TGTCCCAATCTGGTTCAATC+TGG - chr1.2:19730282-19730301 MS.gene041025:CDS 45.0%
! TTTGGCTTCAGAACTGGAAG+AGG - chr1.2:19724461-19724480 MS.gene041025:CDS 45.0%
!! TAGAAGTGTTGGTGAGGACA+GGG - chr1.2:19725631-19725650 MS.gene041025:CDS 45.0%
!! TTAGAAGTGTTGGTGAGGAC+AGG - chr1.2:19725630-19725649 MS.gene041025:CDS 45.0%
!! AAAAAAATATTAAAAAATTC+TGG + chr1.2:19725986-19726005 None:intergenic 5.0%
AATAGAAACTGTGGAGGCCG+GGG - chr1.2:19725055-19725074 MS.gene041025:intron 50.0%
ACACCTCAAGGGACAAACGT+TGG - chr1.2:19727615-19727634 MS.gene041025:intron 50.0%
GGAAGTAGGAGCCATTGTAG+TGG - chr1.2:19730013-19730032 MS.gene041025:CDS 50.0%
TACAACGCGGTGACGATGTT+TGG - chr1.2:19724443-19724462 MS.gene041025:CDS 50.0%
TACGTAAATACAGCGGGCCT+AGG + chr1.2:19724902-19724921 None:intergenic 50.0%
TTGCCAACGTTTGTCCCTTG+AGG + chr1.2:19727621-19727640 None:intergenic 50.0%
TTTGCACGCTCTCTCAGATG+TGG - chr1.2:19727357-19727376 MS.gene041025:CDS 50.0%
! ACTAGTGCTGCTACACCTCA+AGG - chr1.2:19724724-19724743 MS.gene041025:intron 50.0%
! CCCAATCTGGTTCAATCTGG+TGG - chr1.2:19730285-19730304 MS.gene041025:CDS 50.0%
! CTAGTGCTGCTACACCTCAA+GGG - chr1.2:19724725-19724744 MS.gene041025:intron 50.0%
CCATGCCCAGAGCAGTTTCA+AGG - chr1.2:19728679-19728698 MS.gene041025:intron 55.0%
CTCTGGGCATGGTTCCTTTG+TGG + chr1.2:19728671-19728690 None:intergenic 55.0%
GGACGTGGGAGTGAAGCTAA+GGG - chr1.2:19726217-19726236 MS.gene041025:CDS 55.0%
GGCATGGTTCCTTTGTGGCT+GGG + chr1.2:19728666-19728685 None:intergenic 55.0%
TACAACGCGGGGACGATGTT+TGG - chr1.2:19727316-19727335 MS.gene041025:CDS 55.0%
TGCATGGCAGTGTCCCAATC+TGG - chr1.2:19730272-19730291 MS.gene041025:CDS 55.0%
TGGACGTGGGAGTGAAGCTA+AGG - chr1.2:19726216-19726235 MS.gene041025:CDS 55.0%
TTTGCGCGCTCTCTCAGATG+TGG - chr1.2:19724484-19724503 MS.gene041025:intron 55.0%
! CCTTGAAACTGCTCTGGGCA+TGG + chr1.2:19728682-19728701 None:intergenic 55.0%
GGGCATGGTTCCTTTGTGGC+TGG + chr1.2:19728667-19728686 None:intergenic 60.0%
! GTGTTGGTGAGGACAGGGCA+TGG - chr1.2:19725636-19725655 MS.gene041025:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 19724433 19730338 19724433 ID=MS.gene041025
chr1.2 mRNA 19724433 19730338 19724433 ID=MS.gene041025.t1;Parent=MS.gene041025
chr1.2 exon 19729965 19730338 19729965 ID=MS.gene041025.t1.exon1;Parent=MS.gene041025.t1
chr1.2 CDS 19729965 19730338 19729965 ID=cds.MS.gene041025.t1;Parent=MS.gene041025.t1
chr1.2 exon 19729564 19729729 19729564 ID=MS.gene041025.t1.exon2;Parent=MS.gene041025.t1
chr1.2 CDS 19729564 19729729 19729564 ID=cds.MS.gene041025.t1;Parent=MS.gene041025.t1
chr1.2 exon 19729065 19729202 19729065 ID=MS.gene041025.t1.exon3;Parent=MS.gene041025.t1
chr1.2 CDS 19729065 19729202 19729065 ID=cds.MS.gene041025.t1;Parent=MS.gene041025.t1
chr1.2 exon 19727090 19727552 19727090 ID=MS.gene041025.t1.exon4;Parent=MS.gene041025.t1
chr1.2 CDS 19727090 19727552 19727090 ID=cds.MS.gene041025.t1;Parent=MS.gene041025.t1
chr1.2 exon 19726693 19726850 19726693 ID=MS.gene041025.t1.exon5;Parent=MS.gene041025.t1
chr1.2 CDS 19726693 19726850 19726693 ID=cds.MS.gene041025.t1;Parent=MS.gene041025.t1
chr1.2 exon 19726071 19726350 19726071 ID=MS.gene041025.t1.exon6;Parent=MS.gene041025.t1
chr1.2 CDS 19726071 19726350 19726071 ID=cds.MS.gene041025.t1;Parent=MS.gene041025.t1
chr1.2 exon 19725810 19725871 19725810 ID=MS.gene041025.t1.exon7;Parent=MS.gene041025.t1
chr1.2 CDS 19725810 19725871 19725810 ID=cds.MS.gene041025.t1;Parent=MS.gene041025.t1
chr1.2 exon 19725498 19725725 19725498 ID=MS.gene041025.t1.exon8;Parent=MS.gene041025.t1
chr1.2 CDS 19725498 19725725 19725498 ID=cds.MS.gene041025.t1;Parent=MS.gene041025.t1
chr1.2 exon 19725360 19725386 19725360 ID=MS.gene041025.t1.exon9;Parent=MS.gene041025.t1
chr1.2 CDS 19725360 19725386 19725360 ID=cds.MS.gene041025.t1;Parent=MS.gene041025.t1
chr1.2 exon 19724433 19724489 19724433 ID=MS.gene041025.t1.exon10;Parent=MS.gene041025.t1
chr1.2 CDS 19724433 19724489 19724433 ID=cds.MS.gene041025.t1;Parent=MS.gene041025.t1
Gene Sequence

>MS.gene041025

ATGAATTGGGTACAACGCGGTGACGATGTTTGGCTTCAGAACTGGAAGAGGTTTGCGCGCTCTCTCAGATGTGGAGATCTTTTAGTTTTCCAATACAAAGGAGGGTCAGATTTTCATGTCATTATATTGGATGATAGTAGTTTGGAAATTGACTATTCATGTATGAGATGCAATGATGAACAAGAAGCTAAGGAGAGTGATGATGATGATGACTGTGTTGAGATTCCGAATGATCATGAAAATACCCAACAACCCCTCAAGAAAAAGAAAATCAACTCAAATGACATTGCTACTAGTGCTGCTACACCTCAAGGGACAAACATTGGCAAGAGAAAAATTAATATCAATGCATCCTTGCAAAAAGTTTCAGGCAAGTAAATGCAACATTGACAAAAATGTTATTAGGCATTCTATCCACTTTTTAATGCATACAAATTACAATAGTGCATGACTGCATGTTTTTAATCCTAGGCCCGCTGTATTTACGTATTTTTTAATTTTTTAACATTTAATTATTTTTCAAGACTGCCATTAAAAATCAAGACGTGAACTTTTATTAGTTTTTTGAAGTTTTTAAAGACTTTCAAATGCTGAAAATAGTTTTTAAAGTTTTGCAGAGGCTAATAGAAACTGTGGAGGCCGGGGTAAGAAAGCTAAGAAATGCACAAAAACTAAAGATAGGAATGAGAGAAGTTTCACAAATTATCATCCCAATGGGAGTCCTAGTTTCACAGTCAAATTATCGCCATATCACATTGAAGGTTATAATAGATTGGTATGTTTGCTTTACTTTTTTTTTTTCCAGCAATATTTGTACCTAACTGTGTAAGAGGCTTTCATTTTTCTATAGGAACTGAATGTATCGAAATTACAAACAAATCCCCAAATGTTTCTCTTGTAAATAGTCTTATTGAATAAATTTACTAACAGAAAACATATTCAAGGACTAATGTCAATTTATTCAATAAAAGAGAAAAAGTATAGCTAACATACTAAAGACACATTTGAAAATCAAAATAAGTAACAATAGAGACATTTAGGTATATTTTAATTATTGGTTTGACAGCCATGCACGTTACATATACTTATTGAATATATTTTAAGTAATATCTATTTTAAACCATGACCTGAAACAGATAATACCTAGATGGTTTTCGAAAGAATACATGAATGAGTTATTGCAACAGAAGGCCACAATTAGAAGTGTTGGTGAGGACAGGGCATGGTACGTGACGTTATACTTTGATAAAAGCAAGAGCAGTTTTATAATGCAGGTTGGTTGGAAGTCATTTTCAAAGGAACATGACTTGAAAGTTGGTGATGTATGTAAATTTGAGATGACTCAACGCAAACCACTTTCATTCACAATTACTATTTTTTTAATCGTTTTTTCATTTTATTAGATTATTTTATTCAACGCATTATTTTTCATTTTATTAGATTATTTTATTTTTTTAATCGTTTTTTATTTTTATTAATTTTTCCAGAATTTTTAATTTTTTTCCTTATTTTTTTAAAATATTTTTCATTTTTATAAAATTTTCAATTTTCCAGAATTTTTTAATATTTTTTTCAATTTTTTTATTAATTTTTCATTTTTCCAGAATTTTTTAATATTTTTTTAATTTTTTTATTAATTTTTCAATTTTCCAGAATTGTTTAAAAACATATGACGTTTTGGGTGTAAAATATAAATTGGTTTTGCATAACCCACAATACAATTGCTTCAATTCACATTCATCATTTTGAGAAGCAAGAAAGCATCAATGTCAAGTGTTCACTATGGACGTGGGAGTGAAGCTAAGGGAATGCATTTTTACCAAACCATTCAACTTTGTGAATTGCAGGATGAAGAGCTTGTAACCATTCTCAACTTAGCTTCTTCTTTTTTCCATTTCATTCATTCTTTCGATTATTGAAGTAGCTTTTGTAATTGTGTATCACACTATTTGTTGAAAACACAACGACCCATTTTAATCATTGACCCAATTTAATTATTGAATAAACTTTGTTATTGGAATTAATGAATACGAAGATTTGAATGTTGGTAAGCTCATACATAGTTTTCTTATAATTGCTTTGATTTGATGGAGGAATGTTGCATACTTGCTTATCTGGTTTTCTTAGGAACTTTGTGGTTTTCACATGGAGTGTCTAAAATTTTGACACTAAAAACAAACAACCATGTACTGATTTATTATCATTAACGGAATTGGTTTTTCGCTCATGAGCGATTCGCTCATTAACCACTAGTGCTCAATCACTTGGTCATACCAACTCTTTAAGTGGTCTATTTAAGGTTTGTAGTCAATGTGTTTGATGAAAACCCTCAATACTGTTTTCATGATGGTTTCTGTCTGTTGCAAAATTACCTAGTCATTCTTGCTCTATTGTTGCACATAGATCTCCTTGTTCTTGAGTTTCAGAACTAAATTCTTATAATAATTGAGAATGGAATGTTGCACACATACTTGCTTTATGAGATGACTTTGTGTGTATCTACTTGACTTACAATTAGTTCAGATTTCATAAATTCTGCTTTCTTGTATTAGTGCTATGCATGGCTTTAGGTTCTAAACTCATCTTGTTTGATACATATGCTTGACTTATAATGTGGATGAAGAGTGTCCGAACACAGTTTGCTTAATCAGTTCGTGTATTAATTGAATGAAGTTTGCTTGTTAGAAACTAAAACGTTTTGCCGCATTAATCACTTGATGTATGCTTTGCTGCATTAATCTTCATTACTAGCTAACACTCATTGCTTTTTGAAAATGTTCTTGCAGATGATTCCAAGGAAATTCGTAGAGAGACATTGGAAAGATGTATCCAATCCAACATCGCTTAGACTTCCAAATGGGTCTGAGTTCAAAATGAATTGGGTACAACGCGGGGACGATGTTTGGCTTCAGAATTGGAAGCGGTTTGCACGCTCTCTCAGATGTGGAGATCTTTTAGTTTTCCAATACAAAGGAGGGTCAGATTTTCATGTCATTATATTGGATGATAGTAGTTTGGAAATTGACTATTCATGTATGAGATACAATGATGAACAAGAAGCTAAAGAGAGTGATGATGATGATGATGATGACTGTGTTGAGATTCCGAATGACCATGAAAATGCCAAACAACCTCTCAAGAAAAAGAAAATCAACTCAAATGACATTGCTACTAGTGCTGCTACACCTCAAGGGACAAACGTTGGCAAGAGAAAAATTAATATCAATGCATCCCTGCAAAAAGTTTCAGGCAAGTAAATGCAACATTGACAAAAATGTTTTTAGGCATTCTATCCACTTTTTAATGCATACAAATTACAATAGTGCATGTTTTTAATCCTAGGCCCACTGTATTTACGTATTTTTTAATTTTTTAACATTTAATTAATTTTCAAGACTGCCATAAAAAAATCAAGACGTGAACTTTTATTAGTTTTTGAAGTTTTTAAAGACATTCAAATGCTGAAAATAGTTTTTAAAGTTTTGCAGAGGCTAATAGAAACTGTGGAGGCCGGGGTAAGAAAGCTAAGAAATGCACAAAAACTAAAGATAGGAATGAGAGAAGTTTCACAAATTATCATCCCAATGGGAGTCCTAGTTTCACTGTCAAATTATCGCCATATCACATTAAAGGTTATAATAGATTGGTATGTTTGCTTTACTTTTTTTTCCAGCAATATTTGTACCTAATTGTGTAAGAGGCTTTCATTTTTCTATAGGAACTGAATGTATTGAAATTACAAACAAATCCCCAAATGTTTCTCTTGTAAATAGTCTTATTGAATAAATTTACTAACAGAAAACATATTCAAGGACTAATGTCAATTTTTTCAATAAAAGAGAAAAAGTATAGCTAACATACTAAAGACACATTTGAAAATCAAAATAAGTAACAATAGAGACATTTAGGTATATTTTAATTATTGGTTTACATATACTTATTGAATATATTTCAAGTAATATCTATTTTAAACCATGACCTGAAACAGATAATACCTAGATGGTTTTCGAAAGAATACATGAATGAGTTATTGCAACAGAAGGCCACAATTAGAAGTGTTGGTGAGGACAGGGCATGGTACGTGACGTTATACTTTGATAAAAGCAAGAGCAGTTTTATAATGCAGGTTGGTTGGAAGTCATTTTCAAAGGAACATGACTTGAAAGTTGGTGATGTATGTAAATTTGAGATGACTCAACGCGAACCACTTTCATTCACAATTACTATTATCCCAGCCACAAAGGAACCATGCCCAGAGCAGTTTCAAGGTATTTCTTTCATTATTATTGTTTTGTAAAGATAAATAGTTTTAATTTTGTCAACAAATAACAAACAATCATCTGTAACAAATTTTAAGGTTTAAATATACATTGTCCATGTAATGTAAACATACTACTCTTTGCTTTTATTGTGTACAATTCATGAAAATATCTTTAAAATATGTTTACTTTGTGTTCTTAATTACAGCAGATTCTGTAAGTCCAAATATACACGACAAATTCAAGGTTTTTGTAACATCATTCGACAAGGTATGAATTACTTAAAGTGTCGTTACCATTAACATAGCCATGTGTGTGAATGTGTAGAATTTTAATCTGTTCTTATATATGCAGCTGATTGTACTACCAAGTGAGCTGTTGAAGAGACATAATATATTCAGTGGAAATTTAGTGGAGTTGAAAGTAGAAGAAGGAACATGGTTTGTAGAGGTAAATTATGATCAACATCTCGATTATGGGTGGTTCACTAAAGGTTGGCAAGAATTTATGAGAGATTGCAAAGTGAAGATTGGAGACACTTGTTTGTTTGAGATGATTGATGTTCAAAATCATGTGTTCAAGGTTTCAATTATACCAGATGTTTAGAAGAACATTTGTGTTTTGTTATTTTGTAAGTAGATGTTATATTTCATATGAACTTTTTACAATCACTCACAATTGGTGTTGTTTTAGAACTTCTACTCTGACATAGGAGAGCTTGTAAGACTCACAATAGATATTTAGTTGTGAAAATGATGTAATTATTACTATCTCAGTTCATCTGTGAATGAATGCAAAGTGAAGATTAGGAACACTAGTTTGTATGAGATGATTGATTATCAAAATTATGTGTTCAGGGTTTCAATTACAAGAACATTTATGTCTTCTGTTAGTTTGCAATTAGAAGATTACATTTCATATGAACTTCAAATGACCACTCTATGAAATATGAGTGCTTTTTGAATTTTCAATCTTTGATCTAAGAGAGTTTGTAACACTCACTCTAGATATTAAGAAGTTGTGATTATTACTCTTAGTTCATTAATAATTATCGGTCTAAATAAGTAGCAAAGAACATACATATAGAAGCTTTGTAGACATCTAATTAAAATCTGTTTGTTAGTATAAGTACAATCTTGAAGATCATTACTTTCTTTCACTTCTCATTTTAGCGTTGTGACAAATTTGGCACTCCAAATGCTACGCCACACATATCTCGGATTATGTCCAACGCTTGACATAAGGTAATCACATTTAGGAAAATATTTAGCTTTGAGTTATAAGATTACCTTAGGAATGGAGTATGTGATTGTATTTGTTGGGAAGTAGGAGCCATTGTAGTGGTATTTGGTGATGGGGTATTTGTGGCTGATGATAACAACAAAGGTATTGTTGTTTATTATTTTGAGATTCTTAAGGATAATAGTGCCGTAAAATCAATGTTTTTCACCACCTTTCTTATGTATTCAACTTATAGTATCATGTCCTTTCAACAACACTATGGACGTGGGAGTGAAGCTAAGTTGTTAAATTCGAACATTCTTCTTCACAAATGGAGGAATGTTGCATACTTGCTTATCTGCATGGCAGTGTCCCAATCTGGTTCAATCTGGTGGTGTATTGACCTTGGTTTTCATCATTGAATGA
Protein sequence

>MS.gene041025.t1

MNWVQRGDDVWLQNWKRFARSLRCGDLLVFQYKGGSDFHVIILDDSSLEIDYSCMRCNDEQEAKESDDDDDCVEIPNDHENTQQPLKKKKINSNDIATSAATPQGTNIGKRKININASLQKVSGNFAEANRNCGGRGKKAKKCTKTKDRNERSFTNYHPNGSPSFTVKLSPYHIEGYNRLIIPRWFSKEYMNELLQQKATIRSVGEDRAWYVTLYFDKSKSSFIMQMIPRKFVERHWKDVSNPTSLRLPNGSEFKMNWVQRGDDVWLQNWKRFARSLRCGDLLVFQYKGGSDFHVIILDDSSLEIDYSCMRYNDEQEAKESDDDDDDDCVEIPNDHENAKQPLKKKKINSNDIATSAATPQGTNVGKRKININASLQKVSEANRNCGGRGKKAKKCTKTKDRNERSFTNYHPNGSPSFTVKLSPYHIKGYNRLIIPRWFSKEYMNELLQQKATIRSVGEDRAWYVTLYFDKSKSSFIMQVGWKSFSKEHDLKVGDVCKFEMTQREPLSFTITIIPATKEPCPEQFQADSVSPNIHDKFKVFVTSFDKLIVLPSELLKRHNIFSGNLVELKVEEGTWFVEVNYDQHLDYGWFTKGWQEFMRDCKVKIGDTCLFEMIDVQNHVFKNFYSDIGELCPNLVQSGGVLTLVFIIE