Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068155.t1 | XP_024630376.1 | 78.2 | 445 | 57 | 3 | 1 | 435 | 1 | 415 | 6.80E-183 | 650.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068155.t1 | Q8L3W1 | 21.9 | 333 | 225 | 8 | 19 | 321 | 6 | 333 | 5.3e-11 | 70.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068155.t1 | A0A072U9K2 | 67.9 | 473 | 98 | 6 | 8 | 435 | 7 | 470 | 3.1e-169 | 604.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene068155.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068155.t1 | MTR_6g061070 | 69.133 | 473 | 92 | 6 | 8 | 435 | 7 | 470 | 0.0 | 634 |
| MS.gene068155.t1 | MTR_1g035520 | 58.746 | 303 | 106 | 6 | 34 | 323 | 87 | 383 | 4.36e-105 | 317 |
| MS.gene068155.t1 | MTR_1g035520 | 98.039 | 102 | 2 | 0 | 334 | 435 | 282 | 383 | 2.35e-64 | 212 |
| MS.gene068155.t1 | MTR_1g033740 | 64.103 | 195 | 48 | 3 | 1 | 192 | 1 | 176 | 2.10e-79 | 244 |
| MS.gene068155.t1 | MTR_1g035480 | 63.830 | 188 | 45 | 3 | 5 | 192 | 5 | 169 | 1.68e-76 | 236 |
| MS.gene068155.t1 | MTR_1g035500 | 61.140 | 193 | 53 | 3 | 4 | 192 | 6 | 180 | 6.78e-76 | 235 |
| MS.gene068155.t1 | MTR_1g035620 | 36.758 | 438 | 209 | 13 | 23 | 434 | 13 | 408 | 8.34e-66 | 216 |
| MS.gene068155.t1 | MTR_1g035570 | 34.507 | 426 | 216 | 12 | 28 | 435 | 14 | 394 | 1.38e-65 | 216 |
| MS.gene068155.t1 | MTR_1g035510 | 46.888 | 241 | 100 | 7 | 34 | 270 | 1 | 217 | 1.82e-57 | 189 |
| MS.gene068155.t1 | MTR_1g035470 | 61.783 | 157 | 36 | 3 | 34 | 190 | 1 | 133 | 2.65e-55 | 180 |
| MS.gene068155.t1 | MTR_1g035640 | 41.290 | 310 | 148 | 11 | 28 | 335 | 14 | 291 | 1.90e-53 | 185 |
| MS.gene068155.t1 | MTR_1g050845 | 30.673 | 401 | 205 | 9 | 23 | 400 | 13 | 363 | 2.31e-44 | 166 |
| MS.gene068155.t1 | MTR_5g044670 | 29.664 | 327 | 194 | 9 | 19 | 336 | 16 | 315 | 4.98e-38 | 140 |
| MS.gene068155.t1 | MTR_1g035490 | 37.083 | 240 | 117 | 9 | 222 | 435 | 97 | 328 | 1.14e-36 | 137 |
| MS.gene068155.t1 | MTR_3g098790 | 31.056 | 322 | 187 | 10 | 13 | 326 | 7 | 301 | 3.03e-33 | 127 |
| MS.gene068155.t1 | MTR_1g035540 | 54.783 | 115 | 39 | 3 | 247 | 361 | 2 | 103 | 1.20e-31 | 118 |
| MS.gene068155.t1 | MTR_7g050710 | 31.098 | 328 | 189 | 9 | 12 | 326 | 6 | 309 | 9.97e-31 | 120 |
| MS.gene068155.t1 | MTR_1g035650 | 34.956 | 226 | 107 | 7 | 19 | 238 | 9 | 200 | 2.87e-29 | 114 |
| MS.gene068155.t1 | MTR_7g050580 | 29.063 | 320 | 187 | 8 | 13 | 326 | 7 | 292 | 2.94e-29 | 116 |
| MS.gene068155.t1 | MTR_7g050720 | 30.745 | 322 | 187 | 10 | 18 | 323 | 9 | 310 | 5.22e-29 | 116 |
| MS.gene068155.t1 | MTR_6g043890 | 28.571 | 301 | 184 | 11 | 16 | 308 | 12 | 289 | 1.00e-26 | 110 |
| MS.gene068155.t1 | MTR_4g119990 | 26.113 | 337 | 221 | 10 | 9 | 335 | 5 | 323 | 1.96e-26 | 110 |
| MS.gene068155.t1 | MTR_7g050560 | 27.900 | 319 | 192 | 8 | 13 | 326 | 7 | 292 | 2.36e-26 | 108 |
| MS.gene068155.t1 | MTR_3g061310 | 30.189 | 318 | 169 | 14 | 17 | 323 | 10 | 285 | 1.45e-25 | 105 |
| MS.gene068155.t1 | MTR_7g050590 | 27.759 | 299 | 193 | 6 | 34 | 326 | 1 | 282 | 1.55e-25 | 105 |
| MS.gene068155.t1 | MTR_3g061350 | 31.529 | 314 | 163 | 17 | 19 | 322 | 12 | 283 | 2.08e-24 | 102 |
| MS.gene068155.t1 | MTR_1g108780 | 26.510 | 298 | 199 | 9 | 35 | 328 | 13 | 294 | 4.57e-24 | 104 |
| MS.gene068155.t1 | MTR_8g103940 | 23.542 | 480 | 282 | 17 | 17 | 434 | 37 | 493 | 5.10e-23 | 101 |
| MS.gene068155.t1 | MTR_1g035460 | 26.183 | 317 | 206 | 9 | 34 | 338 | 1 | 301 | 3.36e-22 | 98.2 |
| MS.gene068155.t1 | MTR_3g061370 | 26.498 | 317 | 189 | 12 | 12 | 322 | 2 | 280 | 7.00e-21 | 92.4 |
| MS.gene068155.t1 | MTR_3g061340 | 25.857 | 321 | 182 | 12 | 10 | 323 | 3 | 274 | 1.34e-20 | 91.7 |
| MS.gene068155.t1 | MTR_3g061320 | 28.221 | 326 | 173 | 14 | 10 | 323 | 3 | 279 | 3.48e-20 | 90.5 |
| MS.gene068155.t1 | MTR_1g021330 | 23.476 | 328 | 212 | 10 | 17 | 310 | 24 | 346 | 1.01e-18 | 87.8 |
| MS.gene068155.t1 | MTR_3g061290 | 36.691 | 139 | 76 | 5 | 17 | 152 | 10 | 139 | 1.77e-16 | 78.2 |
| MS.gene068155.t1 | MTR_3g061330 | 30.000 | 240 | 131 | 12 | 10 | 245 | 3 | 209 | 1.83e-15 | 76.3 |
| MS.gene068155.t1 | MTR_1g021360 | 25.430 | 291 | 178 | 13 | 31 | 310 | 194 | 456 | 3.17e-15 | 77.8 |
| MS.gene068155.t1 | MTR_1g035440 | 39.806 | 103 | 58 | 2 | 16 | 114 | 12 | 114 | 5.48e-15 | 74.7 |
| MS.gene068155.t1 | MTR_1g021440 | 22.796 | 329 | 215 | 10 | 17 | 310 | 21 | 345 | 8.19e-15 | 76.3 |
| MS.gene068155.t1 | MTR_3g061220 | 36.441 | 118 | 59 | 3 | 17 | 132 | 10 | 113 | 1.95e-14 | 69.7 |
| MS.gene068155.t1 | MTR_1g021400 | 21.406 | 313 | 225 | 8 | 17 | 310 | 28 | 338 | 3.73e-14 | 73.9 |
| MS.gene068155.t1 | MTR_5g070440 | 23.270 | 318 | 172 | 11 | 13 | 323 | 15 | 267 | 1.02e-13 | 71.6 |
| MS.gene068155.t1 | MTR_3g005460 | 23.457 | 324 | 168 | 12 | 15 | 323 | 258 | 516 | 1.69e-13 | 72.8 |
| MS.gene068155.t1 | MTR_1g021435 | 22.156 | 334 | 209 | 11 | 17 | 310 | 20 | 342 | 2.69e-12 | 68.2 |
| MS.gene068155.t1 | MTR_1g021350 | 22.840 | 324 | 208 | 11 | 17 | 321 | 20 | 320 | 3.98e-12 | 67.8 |
| MS.gene068155.t1 | MTR_1g021320 | 24.146 | 439 | 273 | 18 | 18 | 423 | 178 | 589 | 4.99e-12 | 68.6 |
| MS.gene068155.t1 | MTR_7g050640 | 40.206 | 97 | 55 | 2 | 15 | 108 | 9 | 105 | 5.14e-12 | 63.2 |
| MS.gene068155.t1 | MTR_3g005495 | 35.000 | 100 | 62 | 2 | 18 | 114 | 242 | 341 | 1.11e-11 | 67.0 |
| MS.gene068155.t1 | MTR_1g021410 | 23.529 | 323 | 206 | 13 | 17 | 310 | 21 | 331 | 1.60e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068155.t1 | AT3G18990 | 24.551 | 334 | 215 | 12 | 19 | 321 | 6 | 333 | 1.44e-19 | 89.7 |
| MS.gene068155.t1 | AT3G18990 | 24.551 | 334 | 215 | 12 | 19 | 321 | 6 | 333 | 2.38e-19 | 89.7 |
| MS.gene068155.t1 | AT4G33280 | 27.640 | 322 | 195 | 17 | 18 | 323 | 19 | 318 | 1.48e-14 | 75.1 |
Find 75 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGACCCATTTGGAAGTTTA+AGG | 0.139491 | 1.4:+37260379 | None:intergenic |
| TTTGGAAGTTTAAGGGATAT+TGG | 0.281020 | 1.4:+37260387 | None:intergenic |
| TGCAACGCGGTGATGGTATT+TGG | 0.284893 | 1.4:-37260338 | MS.gene068155:CDS |
| AGTTTAAGGGATATTGGATT+TGG | 0.337634 | 1.4:+37260393 | None:intergenic |
| CTCCGGGCCTGGTTCCTTTG+TGG | 0.344484 | 1.4:+37258911 | None:intergenic |
| GGAATTTCGTAGAGAGGTAT+TGG | 0.365580 | 1.4:-37260425 | MS.gene068155:CDS |
| TTATCACCTTCAACATGATA+TGG | 0.368518 | 1.4:+37259557 | None:intergenic |
| AAGAAGCATGGTATATTTAG+TGG | 0.374789 | 1.4:-37257066 | MS.gene068155:CDS |
| GGCCTGGTTCCTTTGTGGTT+GGG | 0.379936 | 1.4:+37258916 | None:intergenic |
| AATCTGACCCTCCTTTGTAT+TGG | 0.385935 | 1.4:+37260259 | None:intergenic |
| ATGGTATTTGGCTTCAGAAT+TGG | 0.387348 | 1.4:-37260326 | MS.gene068155:CDS |
| TATAATGAACATCTCGACTA+TGG | 0.388378 | 1.4:-37256991 | MS.gene068155:CDS |
| GGGCCTGGTTCCTTTGTGGT+TGG | 0.394485 | 1.4:+37258915 | None:intergenic |
| GGTCAGCATGCAAAATGAAT+TGG | 0.396575 | 1.4:-37260362 | MS.gene068155:CDS |
| TGACCCATTTGGAAGTTTAA+GGG | 0.399923 | 1.4:+37260380 | None:intergenic |
| CCTTGAAACTTCTCCGGGCC+TGG | 0.411612 | 1.4:+37258900 | None:intergenic |
| AACCACAAAGGAACCAGGCC+CGG | 0.431169 | 1.4:-37258913 | MS.gene068155:CDS |
| ATTCAGTGGAGTTGAGAGTA+GGG | 0.448522 | 1.4:-37257041 | MS.gene068155:CDS |
| ATATCCCTTAAACTTCCAAA+TGG | 0.449227 | 1.4:-37260384 | MS.gene068155:CDS |
| GCAATACCTTGAAACTTCTC+CGG | 0.461040 | 1.4:+37258894 | None:intergenic |
| TGCTTCTTCAACAGCTCACT+TGG | 0.461685 | 1.4:+37257081 | None:intergenic |
| GAATTTACATGAGATGTTCA+AGG | 0.464486 | 1.4:-37257222 | MS.gene068155:CDS |
| ATAGTAATTGTGAATGAAAG+TGG | 0.468831 | 1.4:+37258942 | None:intergenic |
| GACTATGGTTGGTTCACTAA+AGG | 0.474605 | 1.4:-37256976 | MS.gene068155:CDS |
| TACCTCTCTACGAAATTCCT+TGG | 0.476007 | 1.4:+37260429 | None:intergenic |
| AAGGAACATGAGTTGAAAGT+TGG | 0.478819 | 1.4:-37258999 | MS.gene068155:CDS |
| TGAGAGTAGGGGAAGGAACA+TGG | 0.483751 | 1.4:-37257029 | MS.gene068155:CDS |
| TTATCGCCATATCATGTTGA+AGG | 0.488274 | 1.4:-37259563 | MS.gene068155:CDS |
| AGTGAAACTAGGACTCTCAT+TGG | 0.512039 | 1.4:+37259592 | None:intergenic |
| AGTAGCAATGCCATTTGAGT+TGG | 0.513443 | 1.4:+37260056 | None:intergenic |
| TTCGAAAACCAACTAGGTAT+CGG | 0.513588 | 1.4:+37259158 | None:intergenic |
| AGAGATTGCAAAGTAAAGAC+TGG | 0.515563 | 1.4:-37256937 | MS.gene068155:CDS |
| AATTCAGTGGAGTTGAGAGT+AGG | 0.518002 | 1.4:-37257042 | MS.gene068155:CDS |
| TGTTGAAGGTGATAATAGAT+TGG | 0.520882 | 1.4:-37259549 | MS.gene068155:intron |
| TATCCCTTAAACTTCCAAAT+GGG | 0.521322 | 1.4:-37260383 | MS.gene068155:CDS |
| TGTGCAAAATCATGTGTTCA+AGG | 0.521657 | 1.4:-37256887 | MS.gene068155:CDS |
| TATTCTTTCGAAAACCAACT+AGG | 0.522446 | 1.4:+37259152 | None:intergenic |
| CCAGGCCCGGAGAAGTTTCA+AGG | 0.523708 | 1.4:-37258900 | MS.gene068155:intron |
| CAATACCTTGAAACTTCTCC+GGG | 0.525380 | 1.4:+37258895 | None:intergenic |
| TAATGGAAACACAGGAGGCA+TGG | 0.525975 | 1.4:-37259672 | MS.gene068155:CDS |
| TTCAGTGGAGTTGAGAGTAG+GGG | 0.529294 | 1.4:-37257040 | MS.gene068155:CDS |
| TGAAACAGCCGATACCTAGT+TGG | 0.537742 | 1.4:-37259166 | MS.gene068155:intron |
| AAGGCAACAATTAGAAGTGT+TGG | 0.542696 | 1.4:-37259107 | MS.gene068155:CDS |
| TACATGAATGAGTTATTGCA+AGG | 0.543984 | 1.4:-37259131 | MS.gene068155:CDS |
| ATGAACATCTCGACTATGGT+TGG | 0.544359 | 1.4:-37256987 | MS.gene068155:CDS |
| GTCAGCATGCAAAATGAATT+GGG | 0.544595 | 1.4:-37260361 | MS.gene068155:CDS |
| GTGAAACTAGGACTCTCATT+GGG | 0.547777 | 1.4:+37259593 | None:intergenic |
| TATATTTAGTGGAAATTCAG+TGG | 0.549056 | 1.4:-37257055 | MS.gene068155:CDS |
| AATGGAAACACAGGAGGCAT+GGG | 0.555197 | 1.4:-37259671 | MS.gene068155:CDS |
| ACTACTGCTGCTACACCTCA+AGG | 0.557213 | 1.4:-37260036 | MS.gene068155:CDS |
| ATCCCAACCACAAAGGAACC+AGG | 0.559337 | 1.4:-37258918 | MS.gene068155:CDS |
| TTTGGCTTCAGAATTGGAAG+AGG | 0.566576 | 1.4:-37260320 | MS.gene068155:CDS |
| GATAATTTGACAGTGAAACT+AGG | 0.566923 | 1.4:+37259581 | None:intergenic |
| AGAATTGGAAGAGGTTTGCA+TGG | 0.571811 | 1.4:-37260311 | MS.gene068155:CDS |
| ATGGTTGGTTCACTAAAGGT+TGG | 0.573713 | 1.4:-37256972 | MS.gene068155:CDS |
| TTGTGAATGTTAGTCCCTTG+AGG | 0.580089 | 1.4:+37260021 | None:intergenic |
| AATTGGGTGCAACGCGGTGA+TGG | 0.587564 | 1.4:-37260345 | MS.gene068155:CDS |
| TGTGCTTGCAGATGATTCCA+AGG | 0.587783 | 1.4:-37260446 | MS.gene068155:intron |
| AACAATTAGAAGTGTTGGTG+AGG | 0.601806 | 1.4:-37259102 | MS.gene068155:CDS |
| TTTGCATGGTCGCTCCGATG+TGG | 0.602338 | 1.4:-37260297 | MS.gene068155:CDS |
| TTCCAAGGAATTTCGTAGAG+AGG | 0.604264 | 1.4:-37260431 | MS.gene068155:CDS |
| GAGCGTGGTAGTGAAGCTAA+AGG | 0.613987 | 1.4:-37261250 | MS.gene068155:CDS |
| AGTGAGCTGTTGAAGAAGCA+TGG | 0.617628 | 1.4:-37257078 | MS.gene068155:CDS |
| TACTATTATCCCAACCACAA+AGG | 0.624953 | 1.4:-37258925 | MS.gene068155:CDS |
| GCAGACGCTAATGGAAACAC+AGG | 0.632802 | 1.4:-37259680 | MS.gene068155:intron |
| GAATGAGTTATTGCAAGGGA+AGG | 0.643476 | 1.4:-37259126 | MS.gene068155:CDS |
| GTGGAGTTGAGAGTAGGGGA+AGG | 0.647557 | 1.4:-37257036 | MS.gene068155:CDS |
| GAACAACACGGCAATGAGCG+TGG | 0.647962 | 1.4:-37261265 | MS.gene068155:CDS |
| CTACTGCTGCTACACCTCAA+GGG | 0.654975 | 1.4:-37260035 | MS.gene068155:CDS |
| ACATGAATGAGTTATTGCAA+GGG | 0.661417 | 1.4:-37259130 | MS.gene068155:CDS |
| GACGCTAATGGAAACACAGG+AGG | 0.691601 | 1.4:-37259677 | MS.gene068155:CDS |
| AAACTAAAAGATCTCCACAT+CGG | 0.700040 | 1.4:+37260283 | None:intergenic |
| GTGTTGGTGAGGACAGTGCA+TGG | 0.718576 | 1.4:-37259091 | MS.gene068155:CDS |
| AGCATGTGGTTTGAACAACA+CGG | 0.751745 | 1.4:-37261277 | MS.gene068155:CDS |
| AAAATGAATTGGGTGCAACG+CGG | 0.811094 | 1.4:-37260351 | MS.gene068155:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTTATTGAATAATAAAAA+TGG | + | chr1.4:37257135-37257154 | None:intergenic | 10.0% |
| !! | GTTTATTGAATAATAAAAAT+GGG | + | chr1.4:37257134-37257153 | None:intergenic | 10.0% |
| !! | TGTTTGTAATAAATTAATTA+AGG | + | chr1.4:37259924-37259943 | None:intergenic | 10.0% |
| !!! | TAAAATATACAAATTTTTCA+AGG | - | chr1.4:37260471-37260490 | MS.gene068155:intron | 10.0% |
| !! | TAAACAGATGAATAAATAAA+AGG | + | chr1.4:37258209-37258228 | None:intergenic | 15.0% |
| !! | TTATTTATTCATCTGTTTAT+GGG | - | chr1.4:37258210-37258229 | MS.gene068155:intron | 15.0% |
| !! | TTTATTTATTCATCTGTTTA+TGG | - | chr1.4:37258209-37258228 | MS.gene068155:intron | 15.0% |
| !!! | ATATTTTAAGGTTTAAATCT+TGG | - | chr1.4:37259399-37259418 | MS.gene068155:intron | 15.0% |
| !!! | CAAATGTGTAAAATATTTTA+AGG | - | chr1.4:37259387-37259406 | MS.gene068155:intron | 15.0% |
| !!! | CTAAGATTAATTTTTATACA+TGG | - | chr1.4:37260530-37260549 | MS.gene068155:intron | 15.0% |
| !!! | CTATTTTATTTTACAGTTAT+TGG | + | chr1.4:37260288-37260307 | None:intergenic | 15.0% |
| !! | AAAAGCAATGAGTATAAATT+TGG | + | chr1.4:37257675-37257694 | None:intergenic | 20.0% |
| !! | AACAAAGAAAACATAGTTTA+AGG | + | chr1.4:37260878-37260897 | None:intergenic | 20.0% |
| !! | AAGAATATACGTAAATAAAG+TGG | + | chr1.4:37258347-37258366 | None:intergenic | 20.0% |
| !! | ACAGATACTAATACATAAAT+GGG | + | chr1.4:37257011-37257030 | None:intergenic | 20.0% |
| !! | AGAATATACGTAAATAAAGT+GGG | + | chr1.4:37258346-37258365 | None:intergenic | 20.0% |
| !! | TACAGATACTAATACATAAA+TGG | + | chr1.4:37257012-37257031 | None:intergenic | 20.0% |
| !! | TACGGATTTATTATCATTAA+TGG | - | chr1.4:37257376-37257395 | MS.gene068155:intron | 20.0% |
| !! | TCAAATGCTATATATTCTAT+TGG | - | chr1.4:37257231-37257250 | MS.gene068155:CDS | 20.0% |
| !! | TGATTGAATAATGAAAACTA+AGG | + | chr1.4:37257613-37257632 | None:intergenic | 20.0% |
| !!! | ATGTACTTATGTAATTTGTA+TGG | + | chr1.4:37258308-37258327 | None:intergenic | 20.0% |
| !!! | GAGAAAGAAGTTTATTTTAA+TGG | + | chr1.4:37259898-37259917 | None:intergenic | 20.0% |
| !!! | GATTTTAGTCATTCTAATAA+TGG | - | chr1.4:37260395-37260414 | MS.gene068155:CDS | 20.0% |
| ! | AAACAGTCTATTTAAAGAGT+TGG | + | chr1.4:37257439-37257458 | None:intergenic | 25.0% |
| ! | AATAGAAAAAATGACTGATG+TGG | - | chr1.4:37260303-37260322 | MS.gene068155:CDS | 25.0% |
| ! | AATGATAATAAATCCGTACA+GGG | + | chr1.4:37257374-37257393 | None:intergenic | 25.0% |
| ! | ACTAACAGAAAACATATTCA+TGG | - | chr1.4:37258753-37258772 | MS.gene068155:intron | 25.0% |
| ! | AGTAAAAGATATGGAATATG+CGG | - | chr1.4:37260743-37260762 | MS.gene068155:intron | 25.0% |
| ! | AGTAACAAATACTTGTTCAA+CGG | - | chr1.4:37259582-37259601 | MS.gene068155:CDS | 25.0% |
| ! | ATAGTAATTGTGAATGAAAG+TGG | + | chr1.4:37259208-37259227 | None:intergenic | 25.0% |
| ! | ATGTTAATGTTACTGTCATT+AGG | - | chr1.4:37259518-37259537 | MS.gene068155:intron | 25.0% |
| ! | CTCTTTAAATAGACTGTTTA+AGG | - | chr1.4:37257440-37257459 | MS.gene068155:intron | 25.0% |
| ! | GAGATATGAAAATCCAAAAA+AGG | + | chr1.4:37259868-37259887 | None:intergenic | 25.0% |
| ! | TAATGATAATAAATCCGTAC+AGG | + | chr1.4:37257375-37257394 | None:intergenic | 25.0% |
| ! | TACTAGACTTTATTCTTTCT+GGG | - | chr1.4:37257064-37257083 | MS.gene068155:CDS | 25.0% |
| ! | TATATTTAGTGGAAATTCAG+TGG | - | chr1.4:37261092-37261111 | MS.gene068155:intron | 25.0% |
| ! | TATTAACAAGAGAGACATTT+GGG | + | chr1.4:37258715-37258734 | None:intergenic | 25.0% |
| ! | TATTACAGAAAAAGTAGTAC+AGG | + | chr1.4:37258631-37258650 | None:intergenic | 25.0% |
| ! | TGTTAATGTTACTGTCATTA+GGG | - | chr1.4:37259519-37259538 | MS.gene068155:intron | 25.0% |
| ! | TTAAACACACTATCATCTAT+TGG | + | chr1.4:37260330-37260349 | None:intergenic | 25.0% |
| ! | TTACTAGACTTTATTCTTTC+TGG | - | chr1.4:37257063-37257082 | MS.gene068155:CDS | 25.0% |
| ! | TTGAAGATCAAAATAACTAG+CGG | - | chr1.4:37258845-37258864 | MS.gene068155:intron | 25.0% |
| ! | TTTGTTCATATATATGCAGT+TGG | - | chr1.4:37261035-37261054 | MS.gene068155:intron | 25.0% |
| !! | AACTATTTTCAGCATTTGAA+AGG | + | chr1.4:37258436-37258455 | None:intergenic | 25.0% |
| !! | AATAGATGATAGTGTGTTTA+AGG | - | chr1.4:37260329-37260348 | MS.gene068155:CDS | 25.0% |
| !! | AATTTGTATGGACTAAAAAG+TGG | + | chr1.4:37258296-37258315 | None:intergenic | 25.0% |
| !! | ATAGATGATAGTGTGTTTAA+GGG | - | chr1.4:37260330-37260349 | MS.gene068155:CDS | 25.0% |
| !! | CAAAATTTGAGATGAACTAA+GGG | + | chr1.4:37258257-37258276 | None:intergenic | 25.0% |
| !! | TTTGATTGATTGTAGTTTGT+TGG | + | chr1.4:37259371-37259390 | None:intergenic | 25.0% |
| !! | TTTTATAACATCATCAGACA+AGG | - | chr1.4:37260949-37260968 | MS.gene068155:intron | 25.0% |
| !!! | ATTTTGGAGATTGAATTTCA+AGG | - | chr1.4:37260769-37260788 | MS.gene068155:intron | 25.0% |
| !!! | CTTTTAGTTTTCCAATACAA+AGG | - | chr1.4:37257877-37257896 | MS.gene068155:intron | 25.0% |
| !!! | GGGTTAGTTTATACTTTATA+GGG | + | chr1.4:37256991-37257010 | None:intergenic | 25.0% |
| !!! | TGGGTTAGTTTATACTTTAT+AGG | + | chr1.4:37256992-37257011 | None:intergenic | 25.0% |
| AAAAAGAGAACCAACTCAAA+TGG | - | chr1.4:37258081-37258100 | MS.gene068155:intron | 30.0% | |
| AAACAACACTAATAAGTGGA+CGG | + | chr1.4:37259711-37259730 | None:intergenic | 30.0% | |
| AAACTAAAAGATCTCCACAT+CGG | + | chr1.4:37257867-37257886 | None:intergenic | 30.0% | |
| AACGCAATAAAATAGAGCTT+AGG | + | chr1.4:37259486-37259505 | None:intergenic | 30.0% | |
| AAGCATGATCAAAACAGTAT+TGG | + | chr1.4:37257495-37257514 | None:intergenic | 30.0% | |
| ACACAAACAACACTAATAAG+TGG | + | chr1.4:37259715-37259734 | None:intergenic | 30.0% | |
| ACATGAATGAGTTATTGCAA+GGG | - | chr1.4:37259017-37259036 | MS.gene068155:CDS | 30.0% | |
| ACGCAATAAAATAGAGCTTA+GGG | + | chr1.4:37259485-37259504 | None:intergenic | 30.0% | |
| AGCATGATCAAAACAGTATT+GGG | + | chr1.4:37257494-37257513 | None:intergenic | 30.0% | |
| AGTTTAAGGGATATTGGATT+TGG | + | chr1.4:37257757-37257776 | None:intergenic | 30.0% | |
| ATATCCCTTAAACTTCCAAA+TGG | - | chr1.4:37257763-37257782 | MS.gene068155:intron | 30.0% | |
| ATTAACAAGAGAGACATTTG+GGG | + | chr1.4:37258714-37258733 | None:intergenic | 30.0% | |
| ATTCTATTGGACTTAAGATG+TGG | - | chr1.4:37257244-37257263 | MS.gene068155:intron | 30.0% | |
| CACTAAACTTTCAAAAAAGC+AGG | - | chr1.4:37259086-37259105 | MS.gene068155:CDS | 30.0% | |
| CTATTAACAAGAGAGACATT+TGG | + | chr1.4:37258716-37258735 | None:intergenic | 30.0% | |
| GAATTTACATGAGATGTTCA+AGG | - | chr1.4:37260925-37260944 | MS.gene068155:intron | 30.0% | |
| GATAATTTGACAGTGAAACT+AGG | + | chr1.4:37258569-37258588 | None:intergenic | 30.0% | |
| GTAAAAGATATGGAATATGC+GGG | - | chr1.4:37260744-37260763 | MS.gene068155:intron | 30.0% | |
| TAAAAACAAACAACCCTGTA+CGG | - | chr1.4:37257358-37257377 | MS.gene068155:intron | 30.0% | |
| TACATGAATGAGTTATTGCA+AGG | - | chr1.4:37259016-37259035 | MS.gene068155:CDS | 30.0% | |
| TATAATGAACATCTCGACTA+TGG | - | chr1.4:37261156-37261175 | MS.gene068155:intron | 30.0% | |
| TATCCCTTAAACTTCCAAAT+GGG | - | chr1.4:37257764-37257783 | MS.gene068155:intron | 30.0% | |
| TATTCTTTCGAAAACCAACT+AGG | + | chr1.4:37258998-37259017 | None:intergenic | 30.0% | |
| TCAATACATTCAGTTCCTAT+AGG | + | chr1.4:37258677-37258696 | None:intergenic | 30.0% | |
| TGTTGAAGGTGATAATAGAT+TGG | - | chr1.4:37258598-37258617 | MS.gene068155:intron | 30.0% | |
| TTATCACCTTCAACATGATA+TGG | + | chr1.4:37258593-37258612 | None:intergenic | 30.0% | |
| TTTGGAAGTTTAAGGGATAT+TGG | + | chr1.4:37257763-37257782 | None:intergenic | 30.0% | |
| ! | AAGAAGCATGGTATATTTAG+TGG | - | chr1.4:37261081-37261100 | MS.gene068155:intron | 30.0% |
| ! | AGTATTTGTTACTGTTACGT+CGG | + | chr1.4:37259575-37259594 | None:intergenic | 30.0% |
| ! | CCAAAATTTGAGATGAACTA+AGG | + | chr1.4:37258258-37258277 | None:intergenic | 30.0% |
| ! | CCTTAGTTCATCTCAAATTT+TGG | - | chr1.4:37258255-37258274 | MS.gene068155:intron | 30.0% |
| ! | GCATATTCCATATCTTTTAC+TGG | + | chr1.4:37260744-37260763 | None:intergenic | 30.0% |
| ! | TAAGCTCTATTTTATTGCGT+TGG | - | chr1.4:37259485-37259504 | MS.gene068155:intron | 30.0% |
| ! | TACATGGTAACAGCATTTTA+CGG | + | chr1.4:37260983-37261002 | None:intergenic | 30.0% |
| ! | TAGTTTTCCAATACAAAGGA+GGG | - | chr1.4:37257881-37257900 | MS.gene068155:intron | 30.0% |
| !! | CACAAAAACACATGGTTTTA+GGG | - | chr1.4:37260797-37260816 | MS.gene068155:intron | 30.0% |
| !! | TTAGTTTTCCAATACAAAGG+AGG | - | chr1.4:37257880-37257899 | MS.gene068155:intron | 30.0% |
| !! | TTTGTATTTTCAGTGTCACT+AGG | + | chr1.4:37258048-37258067 | None:intergenic | 30.0% |
| !!! | ACAAAAACACATGGTTTTAG+GGG | - | chr1.4:37260798-37260817 | MS.gene068155:intron | 30.0% |
| !!! | ATTGTCATGTTTGCCTTTTT+TGG | - | chr1.4:37259852-37259871 | MS.gene068155:intron | 30.0% |
| AACAACACTAATAAGTGGAC+GGG | + | chr1.4:37259710-37259729 | None:intergenic | 35.0% | |
| ACAAATACTTGTTCAACGGT+CGG | - | chr1.4:37259586-37259605 | MS.gene068155:CDS | 35.0% | |
| ACATACATTGAACAGTGTGT+AGG | + | chr1.4:37259799-37259818 | None:intergenic | 35.0% | |
| AGAGAGAAGAAACAAGAACA+GGG | - | chr1.4:37259976-37259995 | MS.gene068155:intron | 35.0% | |
| AGAGATTGCAAAGTAAAGAC+TGG | - | chr1.4:37261210-37261229 | MS.gene068155:CDS | 35.0% | |
| CAAATCAGTTTCACATGGTT+TGG | - | chr1.4:37259638-37259657 | MS.gene068155:CDS | 35.0% | |
| CAGTTCCTATAGGAAAATGA+AGG | + | chr1.4:37258667-37258686 | None:intergenic | 35.0% | |
| CGCAATAAAATAGAGCTTAG+GGG | + | chr1.4:37259484-37259503 | None:intergenic | 35.0% | |
| CTGTTGCAAAATGTTTGGTA+TGG | - | chr1.4:37257516-37257535 | MS.gene068155:intron | 35.0% | |
| GACAACACCAGTAAAAGATA+TGG | - | chr1.4:37260734-37260753 | MS.gene068155:intron | 35.0% | |
| GCAATAAAATAGAGCTTAGG+GGG | + | chr1.4:37259483-37259502 | None:intergenic | 35.0% | |
| GCATGATCAAAACAGTATTG+GGG | + | chr1.4:37257493-37257512 | None:intergenic | 35.0% | |
| GCTTTCTGTTGCAAAATGTT+TGG | - | chr1.4:37257511-37257530 | MS.gene068155:intron | 35.0% | |
| GTCAGCATGCAAAATGAATT+GGG | - | chr1.4:37257786-37257805 | MS.gene068155:intron | 35.0% | |
| GTGTAATATTCCCACATATC+TGG | - | chr1.4:37257570-37257589 | MS.gene068155:intron | 35.0% | |
| TACTATTATCCCAACCACAA+AGG | - | chr1.4:37259222-37259241 | MS.gene068155:intron | 35.0% | |
| TGACCCATTTGGAAGTTTAA+GGG | + | chr1.4:37257770-37257789 | None:intergenic | 35.0% | |
| TGAGACAAATCAGTTTCACA+TGG | - | chr1.4:37259633-37259652 | MS.gene068155:CDS | 35.0% | |
| TGTGCAAAATCATGTGTTCA+AGG | - | chr1.4:37261260-37261279 | MS.gene068155:CDS | 35.0% | |
| TTATCGCCATATCATGTTGA+AGG | - | chr1.4:37258584-37258603 | MS.gene068155:intron | 35.0% | |
| TTCGAAAACCAACTAGGTAT+CGG | + | chr1.4:37258992-37259011 | None:intergenic | 35.0% | |
| TTCTGTCAAAATGGAATGAG+CGG | - | chr1.4:37259676-37259695 | MS.gene068155:CDS | 35.0% | |
| ! | AAGGAACATGAGTTGAAAGT+TGG | - | chr1.4:37259148-37259167 | MS.gene068155:CDS | 35.0% |
| ! | AAGGCAACAATTAGAAGTGT+TGG | - | chr1.4:37259040-37259059 | MS.gene068155:CDS | 35.0% |
| ! | ATGGTATTTGGCTTCAGAAT+TGG | - | chr1.4:37257821-37257840 | MS.gene068155:intron | 35.0% |
| ! | CATGATCAAAACAGTATTGG+GGG | + | chr1.4:37257492-37257511 | None:intergenic | 35.0% |
| ! | GCACAAAAACACATGGTTTT+AGG | - | chr1.4:37260796-37260815 | MS.gene068155:intron | 35.0% |
| ! | GTGTTGTCTCTGATTTTTCT+TGG | + | chr1.4:37260722-37260741 | None:intergenic | 35.0% |
| ! | TAAAGTTTTGCAGACGCTAA+TGG | - | chr1.4:37258458-37258477 | MS.gene068155:intron | 35.0% |
| ! | TCGTACCTTCATTTTCCTAT+AGG | - | chr1.4:37258659-37258678 | MS.gene068155:intron | 35.0% |
| ! | TTTTCTGATGAGCAGTTGTT+GGG | - | chr1.4:37260164-37260183 | MS.gene068155:CDS | 35.0% |
| !! | AACAATTAGAAGTGTTGGTG+AGG | - | chr1.4:37259045-37259064 | MS.gene068155:CDS | 35.0% |
| !! | ACGAGGTTTTATGACAGTAA+GGG | + | chr1.4:37260221-37260240 | None:intergenic | 35.0% |
| !! | AGTTGGTTCTCTTTTTCTTG+AGG | + | chr1.4:37258077-37258096 | None:intergenic | 35.0% |
| !! | GTTGGTTCTCTTTTTCTTGA+GGG | + | chr1.4:37258076-37258095 | None:intergenic | 35.0% |
| !! | TGGTTGGAAGTCATTTTCAA+AGG | - | chr1.4:37259129-37259148 | MS.gene068155:CDS | 35.0% |
| !! | TTGGTTCTCTTTTTCTTGAG+GGG | + | chr1.4:37258075-37258094 | None:intergenic | 35.0% |
| AAAATGAATTGGGTGCAACG+CGG | - | chr1.4:37257796-37257815 | MS.gene068155:intron | 40.0% | |
| AACCTCGTGATGAAGGATAA+TGG | - | chr1.4:37260233-37260252 | MS.gene068155:CDS | 40.0% | |
| AACTAGCGGAAGAGACATTT+AGG | - | chr1.4:37258859-37258878 | MS.gene068155:intron | 40.0% | |
| AATCTGACCCTCCTTTGTAT+TGG | + | chr1.4:37257891-37257910 | None:intergenic | 40.0% | |
| AATTCAGTGGAGTTGAGAGT+AGG | - | chr1.4:37261105-37261124 | MS.gene068155:intron | 40.0% | |
| ACATGTCCACAAACTTCTCA+GGG | + | chr1.4:37260682-37260701 | None:intergenic | 40.0% | |
| ACCTAAGCAAACCAGATATG+TGG | + | chr1.4:37257584-37257603 | None:intergenic | 40.0% | |
| AGAATTGGAAGAGGTTTGCA+TGG | - | chr1.4:37257836-37257855 | MS.gene068155:intron | 40.0% | |
| AGGGATCTACTGAAGAAGTT+GGG | + | chr1.4:37260663-37260682 | None:intergenic | 40.0% | |
| AGTGAAACTAGGACTCTCAT+TGG | + | chr1.4:37258558-37258577 | None:intergenic | 40.0% | |
| ATGAACATCTCGACTATGGT+TGG | - | chr1.4:37261160-37261179 | MS.gene068155:intron | 40.0% | |
| ATGTATGTGTGCCATCAAAC+AGG | - | chr1.4:37259811-37259830 | MS.gene068155:intron | 40.0% | |
| ATGTGCAAGGCTCATTCAAA+CGG | + | chr1.4:37258917-37258936 | None:intergenic | 40.0% | |
| ATTCAGTGGAGTTGAGAGTA+GGG | - | chr1.4:37261106-37261125 | MS.gene068155:intron | 40.0% | |
| ATTCATGCACGAAATGTGCA+AGG | + | chr1.4:37258930-37258949 | None:intergenic | 40.0% | |
| CAATACCTTGAAACTTCTCC+GGG | + | chr1.4:37259255-37259274 | None:intergenic | 40.0% | |
| CACACACGTAGCTATATACA+TGG | + | chr1.4:37260999-37261018 | None:intergenic | 40.0% | |
| CAGAGAGAAGAAACAAGAAC+AGG | - | chr1.4:37259975-37259994 | MS.gene068155:intron | 40.0% | |
| CCTAAGCAAACCAGATATGT+GGG | + | chr1.4:37257583-37257602 | None:intergenic | 40.0% | |
| CTGACCCATTTGGAAGTTTA+AGG | + | chr1.4:37257771-37257790 | None:intergenic | 40.0% | |
| GAATGAGTTATTGCAAGGGA+AGG | - | chr1.4:37259021-37259040 | MS.gene068155:CDS | 40.0% | |
| GAGATGAGAGATATACAGAG+AGG | - | chr1.4:37260017-37260036 | MS.gene068155:CDS | 40.0% | |
| GCAATACCTTGAAACTTCTC+CGG | + | chr1.4:37259256-37259275 | None:intergenic | 40.0% | |
| GGTCAGCATGCAAAATGAAT+TGG | - | chr1.4:37257785-37257804 | MS.gene068155:intron | 40.0% | |
| GTATACTTGCTTCACTTTCG+TGG | - | chr1.4:37257275-37257294 | MS.gene068155:intron | 40.0% | |
| GTCATAAAACCTCGTGATGA+AGG | - | chr1.4:37260226-37260245 | MS.gene068155:CDS | 40.0% | |
| GTGAAACTAGGACTCTCATT+GGG | + | chr1.4:37258557-37258576 | None:intergenic | 40.0% | |
| GTTGTGGGTAGTGTAAATTG+TGG | - | chr1.4:37260259-37260278 | MS.gene068155:CDS | 40.0% | |
| TACCTCTCTACGAAATTCCT+TGG | + | chr1.4:37257721-37257740 | None:intergenic | 40.0% | |
| TCAAGACACATCCTGTTTGA+TGG | + | chr1.4:37259825-37259844 | None:intergenic | 40.0% | |
| TGCAACCCAGCAAAAAGTTT+CGG | - | chr1.4:37258167-37258186 | MS.gene068155:intron | 40.0% | |
| TTCCAAGGAATTTCGTAGAG+AGG | - | chr1.4:37257716-37257735 | MS.gene068155:intron | 40.0% | |
| TTGTGAATGTTAGTCCCTTG+AGG | + | chr1.4:37258129-37258148 | None:intergenic | 40.0% | |
| ! | ACTTACCCGAAACTTTTTGC+TGG | + | chr1.4:37258176-37258195 | None:intergenic | 40.0% |
| ! | AGTAGCAATGCCATTTGAGT+TGG | + | chr1.4:37258094-37258113 | None:intergenic | 40.0% |
| ! | ATGGAATATGCGGGCAATTT+TGG | - | chr1.4:37260753-37260772 | MS.gene068155:intron | 40.0% |
| ! | ATGGTTGGTTCACTAAAGGT+TGG | - | chr1.4:37261175-37261194 | MS.gene068155:intron | 40.0% |
| ! | ATTTTGCATGCTGACCCATT+TGG | + | chr1.4:37257781-37257800 | None:intergenic | 40.0% |
| ! | CAGTTTCACATGGTTTGGAA+CGG | - | chr1.4:37259643-37259662 | MS.gene068155:CDS | 40.0% |
| ! | CTGATTTTTCTTGGACTCCT+TGG | + | chr1.4:37260713-37260732 | None:intergenic | 40.0% |
| ! | CTGTTCTTGTTTCTTCTCTC+TGG | + | chr1.4:37259977-37259996 | None:intergenic | 40.0% |
| ! | CTTACCCGAAACTTTTTGCT+GGG | + | chr1.4:37258175-37258194 | None:intergenic | 40.0% |
| ! | GACTATGGTTGGTTCACTAA+AGG | - | chr1.4:37261171-37261190 | MS.gene068155:intron | 40.0% |
| ! | GGAATTTCGTAGAGAGGTAT+TGG | - | chr1.4:37257722-37257741 | MS.gene068155:intron | 40.0% |
| ! | GTTACTGTTACGTCGGATTT+TGG | + | chr1.4:37259568-37259587 | None:intergenic | 40.0% |
| ! | GTTTTCTGATGAGCAGTTGT+TGG | - | chr1.4:37260163-37260182 | MS.gene068155:CDS | 40.0% |
| ! | TCGTGATGAAGGATAATGGT+GGG | - | chr1.4:37260237-37260256 | MS.gene068155:CDS | 40.0% |
| ! | TTGTTTCTTCTCTCTGGTAG+TGG | + | chr1.4:37259971-37259990 | None:intergenic | 40.0% |
| ! | TTTGGCTTCAGAATTGGAAG+AGG | - | chr1.4:37257827-37257846 | MS.gene068155:intron | 40.0% |
| !! | CACGAGGTTTTATGACAGTA+AGG | + | chr1.4:37260222-37260241 | None:intergenic | 40.0% |
| !! | CAGGAGCAGTTTTGTAATGA+GGG | - | chr1.4:37259105-37259124 | MS.gene068155:CDS | 40.0% |
| !! | CGAGGTTTTATGACAGTAAG+GGG | + | chr1.4:37260220-37260239 | None:intergenic | 40.0% |
| !! | GGCAATACCATTTTTGCCTT+CGG | - | chr1.4:37257537-37257556 | MS.gene068155:intron | 40.0% |
| AAACTGACGTTGAAACGGTC+GGG | - | chr1.4:37260130-37260149 | MS.gene068155:CDS | 45.0% | |
| ACCAAGTGATTGAGCACAAG+TGG | + | chr1.4:37257412-37257431 | None:intergenic | 45.0% | |
| ACCACTTGTGCTCAATCACT+TGG | - | chr1.4:37257408-37257427 | MS.gene068155:intron | 45.0% | |
| AGGAGCTGCACAAAAACACA+TGG | - | chr1.4:37260789-37260808 | MS.gene068155:intron | 45.0% | |
| AGTGAGCTGTTGAAGAAGCA+TGG | - | chr1.4:37261069-37261088 | MS.gene068155:intron | 45.0% | |
| CACATGTCCACAAACTTCTC+AGG | + | chr1.4:37260683-37260702 | None:intergenic | 45.0% | |
| CACCATTATCCTTCATCACG+AGG | + | chr1.4:37260238-37260257 | None:intergenic | 45.0% | |
| CAGGGATCTACTGAAGAAGT+TGG | + | chr1.4:37260664-37260683 | None:intergenic | 45.0% | |
| CGAAAGCGGTTCTGTCAAAA+TGG | - | chr1.4:37259667-37259686 | MS.gene068155:CDS | 45.0% | |
| GAAACTGACGTTGAAACGGT+CGG | - | chr1.4:37260129-37260148 | MS.gene068155:CDS | 45.0% | |
| GACCGTTTCAACGTCAGTTT+CGG | + | chr1.4:37260130-37260149 | None:intergenic | 45.0% | |
| GCAACCCAGCAAAAAGTTTC+GGG | - | chr1.4:37258168-37258187 | MS.gene068155:intron | 45.0% | |
| GCTAAAAGTGATATGCTGCG+AGG | - | chr1.4:37260560-37260579 | MS.gene068155:intron | 45.0% | |
| GGGATCTACTGAAGAAGTTG+GGG | + | chr1.4:37260662-37260681 | None:intergenic | 45.0% | |
| GTAGATCCCTGAGAAGTTTG+TGG | - | chr1.4:37260673-37260692 | MS.gene068155:intron | 45.0% | |
| TAATGGAAACACAGGAGGCA+TGG | - | chr1.4:37258475-37258494 | MS.gene068155:intron | 45.0% | |
| TGAAACAGCCGATACCTAGT+TGG | - | chr1.4:37258981-37259000 | MS.gene068155:CDS | 45.0% | |
| TGCTTCTTCAACAGCTCACT+TGG | + | chr1.4:37261069-37261088 | None:intergenic | 45.0% | |
| TGGACATGTGCAGAAAACCA+AGG | - | chr1.4:37260693-37260712 | MS.gene068155:intron | 45.0% | |
| TGTGCTTGCAGATGATTCCA+AGG | - | chr1.4:37257701-37257720 | MS.gene068155:intron | 45.0% | |
| TTACACATAGAGAGAGCCGA+AGG | + | chr1.4:37257556-37257575 | None:intergenic | 45.0% | |
| TTCAGTGGAGTTGAGAGTAG+GGG | - | chr1.4:37261107-37261126 | MS.gene068155:intron | 45.0% | |
| TTGAGCACAAGTGGTTAACG+AGG | + | chr1.4:37257403-37257422 | None:intergenic | 45.0% | |
| ! | AATGGAAACACAGGAGGCAT+GGG | - | chr1.4:37258476-37258495 | MS.gene068155:intron | 45.0% |
| ! | CACTAATAAGTGGACGGGTT+CGG | + | chr1.4:37259705-37259724 | None:intergenic | 45.0% |
| ! | CTCGTGATGAAGGATAATGG+TGG | - | chr1.4:37260236-37260255 | MS.gene068155:CDS | 45.0% |
| ! | TGACGGGTCTAACGGAATAA+CGG | + | chr1.4:37260103-37260122 | None:intergenic | 45.0% |
| !! | AACTAGGTATCGGCTGTTTC+AGG | + | chr1.4:37258982-37259001 | None:intergenic | 45.0% |
| !! | AGCAGTTTTGTAATGAGGGC+TGG | - | chr1.4:37259109-37259128 | MS.gene068155:CDS | 45.0% |
| !! | CCCACATATCTGGTTTGCTT+AGG | - | chr1.4:37257580-37257599 | MS.gene068155:intron | 45.0% |
| !! | CTGTTACGTCGGATTTTGGT+CGG | + | chr1.4:37259564-37259583 | None:intergenic | 45.0% |
| !! | GAAGGATAATGGTGGGTTGT+GGG | - | chr1.4:37260244-37260263 | MS.gene068155:CDS | 45.0% |
| !! | GCAGGAGCAGTTTTGTAATG+AGG | - | chr1.4:37259104-37259123 | MS.gene068155:CDS | 45.0% |
| !! | GTTTTGTAATGAGGGCTGGT+TGG | - | chr1.4:37259113-37259132 | MS.gene068155:CDS | 45.0% |
| !! | TGAAGGATAATGGTGGGTTG+TGG | - | chr1.4:37260243-37260262 | MS.gene068155:CDS | 45.0% |
| !! | TTCTTCTCTCTGGTAGTGGT+GGG | + | chr1.4:37259967-37259986 | None:intergenic | 45.0% |
| !! | TTTCTTCTCTCTGGTAGTGG+TGG | + | chr1.4:37259968-37259987 | None:intergenic | 45.0% |
| ACTACTGCTGCTACACCTCA+AGG | - | chr1.4:37258111-37258130 | MS.gene068155:intron | 50.0% | |
| ATCCCAACCACAAAGGAACC+AGG | - | chr1.4:37259229-37259248 | MS.gene068155:intron | 50.0% | |
| CGCCGAAACTGACGTTGAAA+CGG | - | chr1.4:37260125-37260144 | MS.gene068155:CDS | 50.0% | |
| CGTTTCAACGTCAGTTTCGG+CGG | + | chr1.4:37260127-37260146 | None:intergenic | 50.0% | |
| CTACTGCTGCTACACCTCAA+GGG | - | chr1.4:37258112-37258131 | MS.gene068155:intron | 50.0% | |
| GACGCTAATGGAAACACAGG+AGG | - | chr1.4:37258470-37258489 | MS.gene068155:intron | 50.0% | |
| GACGGGTCTAACGGAATAAC+GGG | + | chr1.4:37260102-37260121 | None:intergenic | 50.0% | |
| GAGAGAGCCGAAGGCAAAAA+TGG | + | chr1.4:37257547-37257566 | None:intergenic | 50.0% | |
| GCAGACGCTAATGGAAACAC+AGG | - | chr1.4:37258467-37258486 | MS.gene068155:intron | 50.0% | |
| GTGTGTAGAGTGTGTGTTCG+TGG | - | chr1.4:37260354-37260373 | MS.gene068155:CDS | 50.0% | |
| GTTCAACGGTCGGATGTGTA+CGG | - | chr1.4:37259596-37259615 | MS.gene068155:CDS | 50.0% | |
| GTTTCAACGTCAGTTTCGGC+GGG | + | chr1.4:37260126-37260145 | None:intergenic | 50.0% | |
| TGAGAGTAGGGGAAGGAACA+TGG | - | chr1.4:37261118-37261137 | MS.gene068155:intron | 50.0% | |
| TTCAACGGTCGGATGTGTAC+GGG | - | chr1.4:37259597-37259616 | MS.gene068155:CDS | 50.0% | |
| ! | GAGCGTGGTAGTGAAGCTAA+AGG | - | chr1.4:37256897-37256916 | MS.gene068155:CDS | 50.0% |
| ! | TGCAACGCGGTGATGGTATT+TGG | - | chr1.4:37257809-37257828 | MS.gene068155:intron | 50.0% |
| ! | TGGTTTGGAACGGACGAAAG+CGG | - | chr1.4:37259653-37259672 | MS.gene068155:CDS | 50.0% |
| !! | GGTCTAACGGAATAACGGGT+GGG | + | chr1.4:37260098-37260117 | None:intergenic | 50.0% |
| !! | GTATCGGCTGTTTCAGGTCA+AGG | + | chr1.4:37258976-37258995 | None:intergenic | 50.0% |
| AACCACAAAGGAACCAGGCC+CGG | - | chr1.4:37259234-37259253 | MS.gene068155:intron | 55.0% | |
| AATTGGGTGCAACGCGGTGA+TGG | - | chr1.4:37257802-37257821 | MS.gene068155:intron | 55.0% | |
| GAACAACACGGCAATGAGCG+TGG | - | chr1.4:37256882-37256901 | MS.gene068155:CDS | 55.0% | |
| GACGTTGAAACGGTCGGGAA+TGG | - | chr1.4:37260135-37260154 | MS.gene068155:CDS | 55.0% | |
| GGCCTGGTTCCTTTGTGGTT+GGG | + | chr1.4:37259234-37259253 | None:intergenic | 55.0% | |
| GTGGAGTTGAGAGTAGGGGA+AGG | - | chr1.4:37261111-37261130 | MS.gene068155:intron | 55.0% | |
| TACAACCGAGCCAAACCACC+TGG | - | chr1.4:37260072-37260091 | MS.gene068155:CDS | 55.0% | |
| TGACAGTAAGGGGTGAGCAC+CGG | + | chr1.4:37260210-37260229 | None:intergenic | 55.0% | |
| TTTGCATGGTCGCTCCGATG+TGG | - | chr1.4:37257850-37257869 | MS.gene068155:intron | 55.0% | |
| ! | GGGTCTAACGGAATAACGGG+TGG | + | chr1.4:37260099-37260118 | None:intergenic | 55.0% |
| ! | GTGTTGGTGAGGACAGTGCA+TGG | - | chr1.4:37259056-37259075 | MS.gene068155:CDS | 55.0% |
| !! | AGCTTAGGGGGACTAGCTGA+AGG | + | chr1.4:37259471-37259490 | None:intergenic | 55.0% |
| !! | GCTTAGGGGGACTAGCTGAA+GGG | + | chr1.4:37259470-37259489 | None:intergenic | 55.0% |
| ACGTCAGTTTCGGCGGGTGA+CGG | + | chr1.4:37260120-37260139 | None:intergenic | 60.0% | |
| CCAGGCCCGGAGAAGTTTCA+AGG | - | chr1.4:37259247-37259266 | MS.gene068155:intron | 60.0% | |
| CCTTGAAACTTCTCCGGGCC+TGG | + | chr1.4:37259250-37259269 | None:intergenic | 60.0% | |
| GGGCCTGGTTCCTTTGTGGT+TGG | + | chr1.4:37259235-37259254 | None:intergenic | 60.0% | |
| TCTCACACTTCACGCGCGTG+TGG | + | chr1.4:37259749-37259768 | None:intergenic | 60.0% | |
| !! | AACGGAATAACGGGTGGGCC+AGG | + | chr1.4:37260093-37260112 | None:intergenic | 60.0% |
| !! | AGTAAGGGGTGAGCACCGGT+CGG | + | chr1.4:37260206-37260225 | None:intergenic | 60.0% |
| AACGGGTGGGCCAGGTGGTT+TGG | + | chr1.4:37260085-37260104 | None:intergenic | 65.0% | |
| CGAATCCGCCCGTAACCGAC+CGG | - | chr1.4:37260188-37260207 | MS.gene068155:CDS | 65.0% | |
| CGTCAGTTTCGGCGGGTGAC+GGG | + | chr1.4:37260119-37260138 | None:intergenic | 65.0% | |
| CTCCGGGCCTGGTTCCTTTG+TGG | + | chr1.4:37259239-37259258 | None:intergenic | 65.0% | |
| ! | CGGTCGGTTACGGGCGGATT+CGG | + | chr1.4:37260190-37260209 | None:intergenic | 65.0% |
| ! | GTGGGCCAGGTGGTTTGGCT+CGG | + | chr1.4:37260080-37260099 | None:intergenic | 65.0% |
| !! | GGAATAACGGGTGGGCCAGG+TGG | + | chr1.4:37260090-37260109 | None:intergenic | 65.0% |
| !! | GGGTGAGCACCGGTCGGTTA+CGG | + | chr1.4:37260200-37260219 | None:intergenic | 65.0% |
| !! | GGTGAGCACCGGTCGGTTAC+GGG | + | chr1.4:37260199-37260218 | None:intergenic | 65.0% |
| !! | TCGGCGGGTGACGGGTCTAA+CGG | + | chr1.4:37260111-37260130 | None:intergenic | 65.0% |
| !! | GAGCACCGGTCGGTTACGGG+CGG | + | chr1.4:37260196-37260215 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 37256873 | 37261296 | 37256873 | ID=MS.gene068155 |
| chr1.4 | mRNA | 37256873 | 37261296 | 37256873 | ID=MS.gene068155.t1;Parent=MS.gene068155 |
| chr1.4 | exon | 37261198 | 37261296 | 37261198 | ID=MS.gene068155.t1.exon1;Parent=MS.gene068155.t1 |
| chr1.4 | CDS | 37261198 | 37261296 | 37261198 | ID=cds.MS.gene068155.t1;Parent=MS.gene068155.t1 |
| chr1.4 | exon | 37259980 | 37260457 | 37259980 | ID=MS.gene068155.t1.exon2;Parent=MS.gene068155.t1 |
| chr1.4 | CDS | 37259980 | 37260457 | 37259980 | ID=cds.MS.gene068155.t1;Parent=MS.gene068155.t1 |
| chr1.4 | exon | 37259550 | 37259698 | 37259550 | ID=MS.gene068155.t1.exon3;Parent=MS.gene068155.t1 |
| chr1.4 | CDS | 37259550 | 37259698 | 37259550 | ID=cds.MS.gene068155.t1;Parent=MS.gene068155.t1 |
| chr1.4 | exon | 37258901 | 37259180 | 37258901 | ID=MS.gene068155.t1.exon4;Parent=MS.gene068155.t1 |
| chr1.4 | CDS | 37258901 | 37259180 | 37258901 | ID=cds.MS.gene068155.t1;Parent=MS.gene068155.t1 |
| chr1.4 | exon | 37257199 | 37257257 | 37257199 | ID=MS.gene068155.t1.exon5;Parent=MS.gene068155.t1 |
| chr1.4 | CDS | 37257199 | 37257257 | 37257199 | ID=cds.MS.gene068155.t1;Parent=MS.gene068155.t1 |
| chr1.4 | exon | 37256873 | 37257115 | 37256873 | ID=MS.gene068155.t1.exon6;Parent=MS.gene068155.t1 |
| chr1.4 | CDS | 37256873 | 37257115 | 37256873 | ID=cds.MS.gene068155.t1;Parent=MS.gene068155.t1 |
| Gene Sequence |
| Protein sequence |
