Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052842.t1 | KEH26464.1 | 64.4 | 477 | 116 | 10 | 13 | 451 | 6 | 466 | 4.60E-156 | 561.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052842.t1 | Q8L3W1 | 22.5 | 333 | 224 | 8 | 25 | 328 | 6 | 333 | 2.9e-13 | 78.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052842.t1 | A0A072U9K2 | 64.4 | 477 | 116 | 10 | 13 | 451 | 6 | 466 | 3.3e-156 | 561.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene052842.t1 | TF | B3 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052842.t1 | MTR_6g061070 | 65.690 | 478 | 108 | 10 | 13 | 451 | 6 | 466 | 0.0 | 589 |
MS.gene052842.t1 | MTR_1g035520 | 55.482 | 301 | 120 | 5 | 40 | 330 | 87 | 383 | 3.74e-95 | 293 |
MS.gene052842.t1 | MTR_1g035520 | 92.105 | 76 | 6 | 0 | 376 | 451 | 304 | 379 | 3.61e-43 | 157 |
MS.gene052842.t1 | MTR_1g035500 | 60.302 | 199 | 60 | 2 | 1 | 199 | 1 | 180 | 1.05e-78 | 244 |
MS.gene052842.t1 | MTR_1g033740 | 61.809 | 199 | 53 | 3 | 1 | 199 | 1 | 176 | 5.88e-78 | 242 |
MS.gene052842.t1 | MTR_1g035480 | 63.636 | 187 | 46 | 2 | 13 | 199 | 5 | 169 | 3.78e-76 | 237 |
MS.gene052842.t1 | MTR_1g035620 | 35.068 | 442 | 227 | 13 | 25 | 451 | 9 | 405 | 4.63e-61 | 206 |
MS.gene052842.t1 | MTR_1g035570 | 32.653 | 441 | 247 | 11 | 34 | 473 | 14 | 405 | 7.34e-61 | 205 |
MS.gene052842.t1 | MTR_1g035470 | 60.127 | 158 | 38 | 3 | 40 | 197 | 1 | 133 | 1.08e-53 | 177 |
MS.gene052842.t1 | MTR_1g035510 | 54.217 | 166 | 55 | 2 | 40 | 205 | 1 | 145 | 1.05e-52 | 177 |
MS.gene052842.t1 | MTR_1g035640 | 37.778 | 315 | 161 | 10 | 34 | 346 | 14 | 295 | 4.59e-51 | 180 |
MS.gene052842.t1 | MTR_1g050845 | 30.882 | 408 | 215 | 12 | 25 | 419 | 9 | 362 | 1.19e-43 | 165 |
MS.gene052842.t1 | MTR_1g035490 | 34.752 | 282 | 157 | 9 | 180 | 450 | 58 | 323 | 6.40e-39 | 144 |
MS.gene052842.t1 | MTR_5g044670 | 29.179 | 329 | 196 | 9 | 25 | 344 | 16 | 316 | 9.93e-37 | 138 |
MS.gene052842.t1 | MTR_3g098790 | 30.341 | 323 | 189 | 11 | 19 | 333 | 7 | 301 | 4.70e-32 | 125 |
MS.gene052842.t1 | MTR_7g050720 | 28.889 | 315 | 203 | 8 | 24 | 330 | 9 | 310 | 2.57e-29 | 117 |
MS.gene052842.t1 | MTR_7g050710 | 29.102 | 323 | 203 | 7 | 18 | 333 | 6 | 309 | 2.70e-29 | 117 |
MS.gene052842.t1 | MTR_7g050580 | 28.319 | 339 | 197 | 9 | 19 | 346 | 7 | 310 | 3.05e-29 | 117 |
MS.gene052842.t1 | MTR_6g043890 | 29.293 | 297 | 184 | 9 | 22 | 313 | 12 | 287 | 3.77e-28 | 115 |
MS.gene052842.t1 | MTR_1g108780 | 24.947 | 469 | 271 | 17 | 41 | 451 | 13 | 458 | 9.70e-28 | 115 |
MS.gene052842.t1 | MTR_1g035650 | 32.301 | 226 | 114 | 6 | 25 | 245 | 9 | 200 | 1.67e-27 | 109 |
MS.gene052842.t1 | MTR_4g119990 | 26.807 | 332 | 216 | 11 | 20 | 342 | 10 | 323 | 1.30e-26 | 111 |
MS.gene052842.t1 | MTR_7g050560 | 26.471 | 340 | 202 | 8 | 19 | 346 | 7 | 310 | 7.45e-26 | 107 |
MS.gene052842.t1 | MTR_8g103940 | 22.267 | 494 | 289 | 15 | 23 | 456 | 37 | 495 | 3.02e-25 | 108 |
MS.gene052842.t1 | MTR_3g061310 | 27.244 | 312 | 187 | 11 | 23 | 330 | 10 | 285 | 4.24e-24 | 102 |
MS.gene052842.t1 | MTR_3g061350 | 29.260 | 311 | 175 | 14 | 25 | 329 | 12 | 283 | 8.40e-23 | 98.6 |
MS.gene052842.t1 | MTR_1g035540 | 53.933 | 89 | 28 | 3 | 254 | 342 | 2 | 77 | 3.03e-22 | 92.8 |
MS.gene052842.t1 | MTR_7g050590 | 26.246 | 301 | 196 | 5 | 40 | 333 | 1 | 282 | 3.22e-22 | 97.1 |
MS.gene052842.t1 | MTR_3g061340 | 27.019 | 322 | 178 | 15 | 16 | 330 | 3 | 274 | 9.01e-21 | 92.4 |
MS.gene052842.t1 | MTR_3g061370 | 27.900 | 319 | 183 | 14 | 18 | 329 | 2 | 280 | 1.35e-20 | 92.0 |
MS.gene052842.t1 | MTR_3g061320 | 27.273 | 319 | 186 | 14 | 16 | 330 | 3 | 279 | 9.38e-20 | 89.7 |
MS.gene052842.t1 | MTR_1g035460 | 26.471 | 306 | 190 | 10 | 40 | 330 | 1 | 286 | 1.42e-19 | 90.9 |
MS.gene052842.t1 | MTR_1g021330 | 21.341 | 328 | 220 | 10 | 23 | 317 | 24 | 346 | 1.97e-16 | 81.3 |
MS.gene052842.t1 | MTR_3g061330 | 29.614 | 233 | 128 | 8 | 23 | 252 | 10 | 209 | 8.33e-16 | 77.4 |
MS.gene052842.t1 | MTR_3g061290 | 35.971 | 139 | 77 | 5 | 23 | 158 | 10 | 139 | 4.34e-15 | 74.3 |
MS.gene052842.t1 | MTR_1g035440 | 39.806 | 103 | 58 | 2 | 22 | 120 | 12 | 114 | 5.49e-15 | 75.1 |
MS.gene052842.t1 | MTR_1g021360 | 24.917 | 301 | 170 | 12 | 36 | 317 | 193 | 456 | 1.93e-14 | 75.9 |
MS.gene052842.t1 | MTR_3g061220 | 36.207 | 116 | 62 | 3 | 23 | 138 | 10 | 113 | 5.48e-14 | 68.9 |
MS.gene052842.t1 | MTR_1g021400 | 22.419 | 339 | 235 | 11 | 23 | 340 | 28 | 359 | 7.59e-14 | 73.2 |
MS.gene052842.t1 | MTR_7g050640 | 40.206 | 97 | 55 | 2 | 21 | 114 | 9 | 105 | 1.71e-13 | 67.4 |
MS.gene052842.t1 | MTR_1g021410 | 24.074 | 324 | 206 | 12 | 23 | 318 | 21 | 332 | 8.35e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 90 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGATGATTCCAAGGAATTT+TGG | 0.146455 | 1.4:-20425060 | MS.gene052842:CDS |
ACAAATTCTTGCCAACCTTT+AGG | 0.237585 | 1.4:+20420391 | None:intergenic |
CAAATTCTTGCCAACCTTTA+GGG | 0.243264 | 1.4:+20420392 | None:intergenic |
TTTGGAAGTTTAAGAGATAT+TGG | 0.253059 | 1.4:+20425009 | None:intergenic |
TGCAACGCAGCGATGGTATT+TGG | 0.280132 | 1.4:-20424960 | MS.gene052842:CDS |
ATGGTATTTGGCTTCAAAAT+TGG | 0.306388 | 1.4:-20424948 | MS.gene052842:CDS |
CTATCACCTTCAACGTGATA+TGG | 0.333665 | 1.4:+20424177 | None:intergenic |
AGTTTAAGAGATATTGGATT+TGG | 0.342240 | 1.4:+20425015 | None:intergenic |
CTCTGGACATGATTCCTTTG+TGG | 0.350591 | 1.4:+20423514 | None:intergenic |
AAGAAGCATGGTATATTTAG+TGG | 0.374789 | 1.4:-20420496 | MS.gene052842:CDS |
TATAATGAACATCTCGACTA+TGG | 0.388378 | 1.4:-20420421 | MS.gene052842:CDS |
TCTTGATGAACCTTGAGAAT+TGG | 0.396663 | 1.4:+20420098 | None:intergenic |
TAGCTTCACTCTCATATTAT+CGG | 0.398705 | 1.4:-20422989 | MS.gene052842:CDS |
GACATGATTCCTTTGTGGTT+GGG | 0.406491 | 1.4:+20423519 | None:intergenic |
GGACATGATTCCTTTGTGGT+TGG | 0.429402 | 1.4:+20423518 | None:intergenic |
TATCTCTCTCCAAAATTCCT+TGG | 0.434629 | 1.4:+20425051 | None:intergenic |
CTAGTTCTTTATCTTGAAGC+TGG | 0.443392 | 1.4:+20426003 | None:intergenic |
GGTCAGTGTGCAAAATGAAT+TGG | 0.447786 | 1.4:-20424984 | MS.gene052842:CDS |
AGCAATGCCATTTGAGTTGG+CGG | 0.456539 | 1.4:+20424678 | None:intergenic |
ATATCTCTTAAACTTCCAAA+TGG | 0.460593 | 1.4:-20425006 | MS.gene052842:CDS |
AAGAGAACCGCCAACTCAAA+TGG | 0.462516 | 1.4:-20424685 | MS.gene052842:CDS |
AAGGAACATGACTTGAAAGT+TGG | 0.470859 | 1.4:-20423602 | MS.gene052842:CDS |
TGATGAACCTTGAGAATTGG+AGG | 0.473528 | 1.4:+20420101 | None:intergenic |
GACTATGGTTGGTTCCCTAA+AGG | 0.480086 | 1.4:-20420406 | MS.gene052842:CDS |
TGAGAGTAGGGGAAGGAACA+TGG | 0.483751 | 1.4:-20420459 | MS.gene052842:CDS |
ATAATACCTTGAAACTGCTC+TGG | 0.488121 | 1.4:+20423497 | None:intergenic |
TGTGAGAGATTGCAAAGTAA+AGG | 0.489991 | 1.4:-20420371 | MS.gene052842:CDS |
AGTGAAACTAGGATTCTCAT+TGG | 0.490637 | 1.4:+20424212 | None:intergenic |
TTAGAAGTGTTGGAGAGGAC+AGG | 0.492802 | 1.4:-20423700 | MS.gene052842:CDS |
TATCTCTTAAACTTCCAAAT+GGG | 0.498661 | 1.4:-20425005 | MS.gene052842:CDS |
CGTTGAAGGTGATAGAAGAT+TGG | 0.499768 | 1.4:-20424169 | MS.gene052842:intron |
AAGGCAACAATTAGAAGTGT+TGG | 0.504037 | 1.4:-20423710 | MS.gene052842:CDS |
AGTGAAGCTAGGGTTCTCAT+TGG | 0.506413 | 1.4:+20423002 | None:intergenic |
TTATCACCATATCACGTTGA+AGG | 0.509106 | 1.4:-20424183 | MS.gene052842:CDS |
TGGAGGAAGCATCATACCTT+AGG | 0.516249 | 1.4:+20420118 | None:intergenic |
GTTGCTTACTGTTAATGTTG+TGG | 0.518922 | 1.4:+20420035 | None:intergenic |
TTTGGCTTCAAAATTGGAAG+AGG | 0.520115 | 1.4:-20424942 | MS.gene052842:CDS |
TAATGGAAACACAGGAGGCA+TGG | 0.520474 | 1.4:-20424292 | MS.gene052842:CDS |
TGTGCAAAATCATGTGTTCA+AGG | 0.521657 | 1.4:-20420317 | MS.gene052842:intron |
ATAGTAATTGTGAATGATAG+TGG | 0.521706 | 1.4:+20423545 | None:intergenic |
TATTCTTTCGAAAACCAACT+AGG | 0.522446 | 1.4:+20423755 | None:intergenic |
GTGAAGCTAGGGTTCTCATT+GGG | 0.527042 | 1.4:+20423003 | None:intergenic |
ATTCTCATTGGGATGCTCAA+TGG | 0.528590 | 1.4:+20424224 | None:intergenic |
TGTTGAAGGTGATAATAGAT+TGG | 0.530752 | 1.4:-20422959 | MS.gene052842:intron |
TTATCGGCATGTCATGTTGA+AGG | 0.531273 | 1.4:-20422973 | MS.gene052842:CDS |
AGTAGCAATGCCATTTGAGT+TGG | 0.533991 | 1.4:+20424675 | None:intergenic |
GTGAAACTAGGATTCTCATT+GGG | 0.534567 | 1.4:+20424213 | None:intergenic |
AGAGATTGCAAAGTAAAGGC+TGG | 0.538378 | 1.4:-20420367 | MS.gene052842:CDS |
GATAATATGAGAGTGAAGCT+AGG | 0.541987 | 1.4:+20422991 | None:intergenic |
TCATGTCCAGAGCAGTTTCA+AGG | 0.542874 | 1.4:-20423503 | MS.gene052842:intron |
AATGGAAACACAGGAGGCAT+GGG | 0.543418 | 1.4:-20424291 | MS.gene052842:CDS |
TACATGAATGAGTTATTGCA+AGG | 0.543984 | 1.4:-20423734 | MS.gene052842:CDS |
ATGAACATCTCGACTATGGT+TGG | 0.544359 | 1.4:-20420417 | MS.gene052842:CDS |
ATTCCGTGGAGTTGAGAGTA+GGG | 0.547073 | 1.4:-20420471 | MS.gene052842:CDS |
GTCAGTGTGCAAAATGAATT+GGG | 0.549331 | 1.4:-20424983 | MS.gene052842:CDS |
TGAAACAGGCGATACCTAGT+TGG | 0.550112 | 1.4:-20423769 | MS.gene052842:intron |
ATGGTTGGTTCCCTAAAGGT+TGG | 0.559034 | 1.4:-20420402 | MS.gene052842:CDS |
TGTTCTTGCAGATGATTCCA+AGG | 0.559130 | 1.4:-20425068 | MS.gene052842:intron |
TGCTTCTTCAACAGCTCACA+TGG | 0.562099 | 1.4:+20420511 | None:intergenic |
AAAATCAGAAAGCAGGCCTA+AGG | 0.562718 | 1.4:-20420134 | MS.gene052842:intron |
AGGTTGGAAAATCAGAAAGC+AGG | 0.564948 | 1.4:-20420141 | MS.gene052842:intron |
AATCTGACCCTCCTTTGTAT+CGG | 0.568734 | 1.4:+20424881 | None:intergenic |
TATATTTAGTGGAAATTCCG+TGG | 0.570238 | 1.4:-20420485 | MS.gene052842:CDS |
GATGCTTCCTCCAATTCTCA+AGG | 0.572727 | 1.4:-20420108 | MS.gene052842:CDS |
AATTGGGTGCAACGCAGCGA+TGG | 0.580700 | 1.4:-20424967 | MS.gene052842:CDS |
AATTCCGTGGAGTTGAGAGT+AGG | 0.585424 | 1.4:-20420472 | MS.gene052842:CDS |
GATAATATGAGAGTGAAACT+AGG | 0.591398 | 1.4:+20424201 | None:intergenic |
TAGAAGTGTTGGAGAGGACA+GGG | 0.592173 | 1.4:-20423699 | MS.gene052842:CDS |
TTGTCAATGTTAGTCCGTTG+AGG | 0.593883 | 1.4:+20424640 | None:intergenic |
GCAGAGGCTAATGGAAACAC+AGG | 0.596384 | 1.4:-20424300 | MS.gene052842:intron |
GTCTATTGTGATTGTGAATG+CGG | 0.596742 | 1.4:+20426075 | None:intergenic |
AGACGTGGCAGTGAAGCTAA+AGG | 0.598492 | 1.4:-20426056 | MS.gene052842:CDS |
AACAATTAGAAGTGTTGGAG+AGG | 0.604246 | 1.4:-20423705 | MS.gene052842:CDS |
CTACTACTGTTACACCTCAA+CGG | 0.609207 | 1.4:-20424654 | MS.gene052842:CDS |
TGATTAAAGATGATCGAGGA+AGG | 0.610178 | 1.4:+20420070 | None:intergenic |
ATAATATGAGAGTGAAGCTA+GGG | 0.620276 | 1.4:+20422992 | None:intergenic |
TACTATTATCCCAACCACAA+AGG | 0.624953 | 1.4:-20423528 | MS.gene052842:CDS |
TTCCCCTACTCTCAACTCCA+CGG | 0.627106 | 1.4:+20420468 | None:intergenic |
GGAAGGAACATGGTTTGTAG+AGG | 0.629163 | 1.4:-20420449 | MS.gene052842:CDS |
AAACTAAAAGATCTCCGCAT+CGG | 0.638428 | 1.4:+20424905 | None:intergenic |
GAATGAGTTATTGCAAGGGA+AGG | 0.643476 | 1.4:-20423729 | MS.gene052842:CDS |
TTTGCAAGTTTGCTCCGATG+CGG | 0.646883 | 1.4:-20424919 | MS.gene052842:CDS |
GTGTTGGAGAGGACAGGGCA+TGG | 0.648324 | 1.4:-20423694 | MS.gene052842:CDS |
TTCCGTGGAGTTGAGAGTAG+GGG | 0.660437 | 1.4:-20420470 | MS.gene052842:CDS |
ACATGAATGAGTTATTGCAA+GGG | 0.661417 | 1.4:-20423733 | MS.gene052842:CDS |
TGTGAGCTGTTGAAGAAGCA+TGG | 0.677091 | 1.4:-20420508 | MS.gene052842:CDS |
GTGGAGTTGAGAGTAGGGGA+AGG | 0.685462 | 1.4:-20420466 | MS.gene052842:CDS |
GAGGCTAATGGAAACACAGG+AGG | 0.702704 | 1.4:-20424297 | MS.gene052842:CDS |
ATTCACAATCACAATAGACG+TGG | 0.721818 | 1.4:-20426071 | MS.gene052842:CDS |
GCTTTGATTAAAGATGATCG+AGG | 0.729435 | 1.4:+20420066 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATATACATTAATAAAG+TGG | + | chr1.4:20422843-20422862 | None:intergenic | 10.0% |
!! | AAAATATACATTAATAAAGT+GGG | + | chr1.4:20422842-20422861 | None:intergenic | 10.0% |
!! | TTATTGAATAAATTTACTTT+AGG | + | chr1.4:20423299-20423318 | None:intergenic | 10.0% |
!!! | AAAACTTCAAAAATTATTTT+CGG | + | chr1.4:20422956-20422975 | None:intergenic | 10.0% |
!!! | TAAAATATAGAAATTTTTCA+AGG | - | chr1.4:20424952-20424971 | MS.gene052842:CDS | 10.0% |
!!! | TTATTATTTTAATTATCACT+AGG | + | chr1.4:20422649-20422668 | None:intergenic | 10.0% |
!! | TAAACAGATGAATAATTAAA+AGG | + | chr1.4:20421500-20421519 | None:intergenic | 15.0% |
!! | TGCTTGTAATAAATTAATTA+AGG | + | chr1.4:20424387-20424406 | None:intergenic | 15.0% |
!! | TTAATTATTCATCTGTTTAT+GGG | - | chr1.4:20421501-20421520 | MS.gene052842:intron | 15.0% |
!! | TTTAATTATTCATCTGTTTA+TGG | - | chr1.4:20421500-20421519 | MS.gene052842:intron | 15.0% |
!!! | AAAATTTTAGGTTGAAAAAT+GGG | + | chr1.4:20420880-20420899 | None:intergenic | 15.0% |
!!! | ATATTTTAAGGTTTAAATCT+TGG | - | chr1.4:20423863-20423882 | MS.gene052842:intron | 15.0% |
!!! | ATCTTTTTTATTAATGGAAT+TGG | - | chr1.4:20420437-20420456 | MS.gene052842:CDS | 15.0% |
!!! | ATTTTTAGTGTCAAAATTTT+AGG | + | chr1.4:20420892-20420911 | None:intergenic | 15.0% |
!!! | CAAATGTGTAAAATATTTTA+AGG | - | chr1.4:20423851-20423870 | MS.gene052842:intron | 15.0% |
!!! | CTAAGATTAATTTTTATACA+CGG | - | chr1.4:20425011-20425030 | MS.gene052842:CDS | 15.0% |
!!! | CTATTTTATTTTACAGTTAT+TGG | + | chr1.4:20424769-20424788 | None:intergenic | 15.0% |
!! | AACAAAGAAAACATAGTTTA+AGG | + | chr1.4:20425358-20425377 | None:intergenic | 20.0% |
!! | AATTTGATGAAAACAGTATT+GGG | + | chr1.4:20420304-20420323 | None:intergenic | 20.0% |
!! | ACTATTACTGAGAAAAAAAA+AGG | + | chr1.4:20423137-20423156 | None:intergenic | 20.0% |
!! | TACTAACAAAAACATATTCA+AGG | - | chr1.4:20423273-20423292 | MS.gene052842:intron | 20.0% |
!! | TATTAACAAGAAAGACATTT+GGG | + | chr1.4:20422022-20422041 | None:intergenic | 20.0% |
!! | TATTACTGAAAAAGTAGTAT+AGG | + | chr1.4:20421921-20421940 | None:intergenic | 20.0% |
!! | TTCAATACAACTATTAAGAA+AGG | + | chr1.4:20423247-20423266 | None:intergenic | 20.0% |
!! | TTTATTAGAGCTATAGATTA+GGG | - | chr1.4:20420173-20420192 | MS.gene052842:intron | 20.0% |
!!! | AATTTGTATGGATTAAAAAG+TGG | + | chr1.4:20421587-20421606 | None:intergenic | 20.0% |
!!! | ATCCAGAATAAATTTTTGAA+TGG | - | chr1.4:20423566-20423585 | MS.gene052842:CDS | 20.0% |
!!! | ATTGATTTTCTTTTTCTTGA+AGG | + | chr1.4:20422677-20422696 | None:intergenic | 20.0% |
!!! | ATTTGTATGGATTAAAAAGT+GGG | + | chr1.4:20421586-20421605 | None:intergenic | 20.0% |
!!! | CAAAATTTTAGGTTGAAAAA+TGG | + | chr1.4:20420881-20420900 | None:intergenic | 20.0% |
!!! | GAGAAAGAAGTTTATTTTAA+TGG | + | chr1.4:20424361-20424380 | None:intergenic | 20.0% |
!!! | GATTTTAGTCATTCTAATAA+TGG | - | chr1.4:20424876-20424895 | MS.gene052842:CDS | 20.0% |
!!! | GCTATGATCTTTTTTATTAA+TGG | - | chr1.4:20420431-20420450 | MS.gene052842:CDS | 20.0% |
!!! | TAAAAACTATTTTCAGCATT+TGG | + | chr1.4:20421730-20421749 | None:intergenic | 20.0% |
!!! | TCATTTGGTTTGATTTTATT+TGG | - | chr1.4:20420400-20420419 | MS.gene052842:CDS | 20.0% |
!!! | TCCAGAATAAATTTTTGAAT+GGG | - | chr1.4:20423567-20423586 | MS.gene052842:CDS | 20.0% |
!!! | TTGATTTTCTTTTTCTTGAA+GGG | + | chr1.4:20422676-20422695 | None:intergenic | 20.0% |
!!! | TTTAAATATGTTTTTTGTCC+TGG | + | chr1.4:20425063-20425082 | None:intergenic | 20.0% |
!!! | TTTTATTAGAGCTATAGATT+AGG | - | chr1.4:20420172-20420191 | MS.gene052842:intron | 20.0% |
!!! | TTTTATTTTGACTCTGTTTT+AGG | - | chr1.4:20420250-20420269 | MS.gene052842:intron | 20.0% |
! | AAAGAACATAGCAACAATTT+CGG | + | chr1.4:20420344-20420363 | None:intergenic | 25.0% |
! | ACTAACAGAAAACATATTCA+AGG | - | chr1.4:20422060-20422079 | MS.gene052842:intron | 25.0% |
! | AGAACTAAAAACATGTACTT+TGG | + | chr1.4:20421611-20421630 | None:intergenic | 25.0% |
! | AGATCATGAAATTCAATTCA+TGG | - | chr1.4:20420664-20420683 | MS.gene052842:intron | 25.0% |
! | AGTTTAAGAGATATTGGATT+TGG | + | chr1.4:20421045-20421064 | None:intergenic | 25.0% |
! | ATAGTAATTGTGAATGATAG+TGG | + | chr1.4:20422515-20422534 | None:intergenic | 25.0% |
! | ATATCTCTTAAACTTCCAAA+TGG | - | chr1.4:20421051-20421070 | MS.gene052842:intron | 25.0% |
! | ATGTTAATGTTACTGTCATT+AGG | - | chr1.4:20423981-20424000 | MS.gene052842:intron | 25.0% |
! | ATTAACAAGAAAGACATTTG+GGG | + | chr1.4:20422021-20422040 | None:intergenic | 25.0% |
! | ATTTGATGAAAACAGTATTG+GGG | + | chr1.4:20420303-20420322 | None:intergenic | 25.0% |
! | CGTAAAAGATATAGAATATG+CGG | - | chr1.4:20425224-20425243 | MS.gene052842:intron | 25.0% |
! | CTATTAACAAGAAAGACATT+TGG | + | chr1.4:20422023-20422042 | None:intergenic | 25.0% |
! | GAATTTGATGAAAACAGTAT+TGG | + | chr1.4:20420305-20420324 | None:intergenic | 25.0% |
! | GGATTTATCATCTTTAATAG+TGG | - | chr1.4:20420194-20420213 | MS.gene052842:intron | 25.0% |
! | GTAAAAGATATAGAATATGC+GGG | - | chr1.4:20425225-20425244 | MS.gene052842:intron | 25.0% |
! | TAAAAATTCCATTCCAGTTA+AGG | + | chr1.4:20420157-20420176 | None:intergenic | 25.0% |
! | TAACAAAAGAGAAAAAGTAG+AGG | - | chr1.4:20423325-20423344 | MS.gene052842:intron | 25.0% |
! | TATCTCTTAAACTTCCAAAT+GGG | - | chr1.4:20421052-20421071 | MS.gene052842:intron | 25.0% |
! | TCATTCAATAATGAAAACCA+AGG | + | chr1.4:20420839-20420858 | None:intergenic | 25.0% |
! | TCCCATTCAAAAATTTATTC+TGG | + | chr1.4:20423571-20423590 | None:intergenic | 25.0% |
! | TGTTAATGTTACTGTCATTA+GGG | - | chr1.4:20423982-20424001 | MS.gene052842:intron | 25.0% |
! | TTTGGAAGTTTAAGAGATAT+TGG | + | chr1.4:20421051-20421070 | None:intergenic | 25.0% |
! | TTTGTTCATATATATGCAGT+TGG | - | chr1.4:20425515-20425534 | MS.gene052842:intron | 25.0% |
! | TTTGTTTCATTTAAACCAAC+GGG | + | chr1.4:20425873-20425892 | None:intergenic | 25.0% |
!! | AATAGATGATAGTGTGTTTA+AGG | - | chr1.4:20424810-20424829 | MS.gene052842:CDS | 25.0% |
!! | ATAAATTTTTGAATGGGAAG+TGG | - | chr1.4:20423573-20423592 | MS.gene052842:CDS | 25.0% |
!! | ATAGATGATAGTGTGTTTAA+GGG | - | chr1.4:20424811-20424830 | MS.gene052842:CDS | 25.0% |
!! | ATGTACTTTGGTAATTTGTA+TGG | + | chr1.4:20421599-20421618 | None:intergenic | 25.0% |
!! | CAAAATTTGAGATGAACTAA+GGG | + | chr1.4:20421548-20421567 | None:intergenic | 25.0% |
!! | CGCATATTCTATATCTTTTA+CGG | + | chr1.4:20425226-20425245 | None:intergenic | 25.0% |
!! | CTTTGTTTCATTTAAACCAA+CGG | + | chr1.4:20425874-20425893 | None:intergenic | 25.0% |
!! | GCATATTCTATATCTTTTAC+GGG | + | chr1.4:20425225-20425244 | None:intergenic | 25.0% |
!! | TGATTTTCTTTTTCTTGAAG+GGG | + | chr1.4:20422675-20422694 | None:intergenic | 25.0% |
!! | TTAGTATTTTCAATGTCACT+AGG | + | chr1.4:20421336-20421355 | None:intergenic | 25.0% |
!! | TTTGATTGATTGTAGTTTGT+TGG | + | chr1.4:20423835-20423854 | None:intergenic | 25.0% |
!!! | AATAAACACATTGATTTAGC+TGG | + | chr1.4:20422738-20422757 | None:intergenic | 25.0% |
!!! | ATAAACACATTGATTTAGCT+GGG | + | chr1.4:20422737-20422756 | None:intergenic | 25.0% |
!!! | ATTGTCATGTTTACCTTTTT+TGG | - | chr1.4:20424315-20424334 | MS.gene052842:intron | 25.0% |
!!! | TAATTTTTGAAGTTTTGCAG+AGG | - | chr1.4:20422960-20422979 | MS.gene052842:CDS | 25.0% |
!!! | TAGTTTTTAAAGTTTTGCAG+AGG | - | chr1.4:20421741-20421760 | MS.gene052842:intron | 25.0% |
!!! | TGCTTGTTTTGTCATTTTAA+GGG | - | chr1.4:20425783-20425802 | MS.gene052842:intron | 25.0% |
!!! | TTGCTTGTTTTGTCATTTTA+AGG | - | chr1.4:20425782-20425801 | MS.gene052842:intron | 25.0% |
AAAACCAATGAGTTTCAACA+TGG | + | chr1.4:20420963-20420982 | None:intergenic | 30.0% | |
AAACAACAGTAATAAGTGGA+TGG | + | chr1.4:20424174-20424193 | None:intergenic | 30.0% | |
AACAACAGTAATAAGTGGAT+GGG | + | chr1.4:20424173-20424192 | None:intergenic | 30.0% | |
AACGCAATAAAATAGAGCTT+GGG | + | chr1.4:20423949-20423968 | None:intergenic | 30.0% | |
AACTAGAAGAAGAGACATTT+AGG | - | chr1.4:20422165-20422184 | MS.gene052842:intron | 30.0% | |
AATAGAAAAAATGACTGACG+TGG | - | chr1.4:20424784-20424803 | MS.gene052842:CDS | 30.0% | |
ACAATAGAGCAAGAATGAAT+AGG | + | chr1.4:20420597-20420616 | None:intergenic | 30.0% | |
ACACAAACAACAGTAATAAG+TGG | + | chr1.4:20424178-20424197 | None:intergenic | 30.0% | |
ACATGAATGAGTTATTGCAA+GGG | - | chr1.4:20422324-20422343 | MS.gene052842:intron | 30.0% | |
ACTATACGAACTGATTGTAT+TGG | - | chr1.4:20423194-20423213 | MS.gene052842:intron | 30.0% | |
ATAATATGAGAGTGAAGCTA+GGG | + | chr1.4:20423068-20423087 | None:intergenic | 30.0% | |
ATAGTAATCGTGAATGAAAG+TGG | + | chr1.4:20423672-20423691 | None:intergenic | 30.0% | |
CCAAATGAAAAGATCTATGA+CGG | + | chr1.4:20420388-20420407 | None:intergenic | 30.0% | |
CGTAACAAATACTTGTTCAA+CGG | - | chr1.4:20424045-20424064 | MS.gene052842:intron | 30.0% | |
CTATTAAGAAAGGAGACATT+TGG | + | chr1.4:20423237-20423256 | None:intergenic | 30.0% | |
GAATTTACATGAGATGTTCA+AGG | - | chr1.4:20425405-20425424 | MS.gene052842:intron | 30.0% | |
GAGATATGAAAAGCCAAAAA+AGG | + | chr1.4:20424331-20424350 | None:intergenic | 30.0% | |
GATAATATGAGAGTGAAACT+AGG | + | chr1.4:20421859-20421878 | None:intergenic | 30.0% | |
GGGTTTAGTTAAGATAGAAA+TGG | + | chr1.4:20420124-20420143 | None:intergenic | 30.0% | |
TACATGAATGAGTTATTGCA+AGG | - | chr1.4:20422323-20422342 | MS.gene052842:intron | 30.0% | |
TAGCTTCACTCTCATATTAT+CGG | - | chr1.4:20423068-20423087 | MS.gene052842:intron | 30.0% | |
TATAATGAACATCTCGACTA+TGG | - | chr1.4:20425636-20425655 | MS.gene052842:intron | 30.0% | |
TATATTTAGTGGAAATTCCG+TGG | - | chr1.4:20425572-20425591 | MS.gene052842:intron | 30.0% | |
TATTCTCTAATTACGAGACT+CGG | - | chr1.4:20425825-20425844 | MS.gene052842:intron | 30.0% | |
TATTCTTTCGAAAACCAACT+AGG | + | chr1.4:20422305-20422324 | None:intergenic | 30.0% | |
TCTTATAACATCATCAGACA+AGG | - | chr1.4:20425429-20425448 | MS.gene052842:intron | 30.0% | |
TGTTGAAGGTGATAATAGAT+TGG | - | chr1.4:20423098-20423117 | MS.gene052842:intron | 30.0% | |
TGTTGCTATGTTCTTTATGA+AGG | - | chr1.4:20420348-20420367 | MS.gene052842:CDS | 30.0% | |
TTAATGCAGCAAAGTATACA+TGG | + | chr1.4:20420921-20420940 | None:intergenic | 30.0% | |
TTGATCTTCAAATGTGTCTT+TGG | + | chr1.4:20422142-20422161 | None:intergenic | 30.0% | |
TTTATGCACTGAATCATCAT+AGG | + | chr1.4:20426047-20426066 | None:intergenic | 30.0% | |
! | AAATTATTTTCGGCATCTGA+AGG | + | chr1.4:20422946-20422965 | None:intergenic | 30.0% |
! | AACTATTTTCAGCATTTGGA+AGG | + | chr1.4:20421726-20421745 | None:intergenic | 30.0% |
! | AAGAAGCATGGTATATTTAG+TGG | - | chr1.4:20425561-20425580 | MS.gene052842:intron | 30.0% |
! | AATTATTTTCGGCATCTGAA+GGG | + | chr1.4:20422945-20422964 | None:intergenic | 30.0% |
! | ATCTGAAGGGTACAAAAAAA+AGG | + | chr1.4:20422932-20422951 | None:intergenic | 30.0% |
! | ATGGTATTTGGCTTCAAAAT+TGG | - | chr1.4:20421109-20421128 | MS.gene052842:intron | 30.0% |
! | CATGATGAAAACAGTATTGA+GGG | + | chr1.4:20420552-20420571 | None:intergenic | 30.0% |
! | CCAAAATTTGAGATGAACTA+AGG | + | chr1.4:20421549-20421568 | None:intergenic | 30.0% |
! | CCTTAGTTCATCTCAAATTT+TGG | - | chr1.4:20421546-20421565 | MS.gene052842:intron | 30.0% |
! | CGTTGAACAAGTATTTGTTA+CGG | + | chr1.4:20424047-20424066 | None:intergenic | 30.0% |
! | TTTGATGAAAACAGTATTGG+GGG | + | chr1.4:20420302-20420321 | None:intergenic | 30.0% |
!! | ATGAGGTTTTATGACAGTAA+GGG | + | chr1.4:20424702-20424721 | None:intergenic | 30.0% |
!! | ATGCGCTTTTGTAATTTGTA+TGG | + | chr1.4:20422805-20422824 | None:intergenic | 30.0% |
!! | CACAATAACACATGGTTTTA+GGG | - | chr1.4:20425278-20425297 | MS.gene052842:intron | 30.0% |
!! | CGTTGGTTTAAATGAAACAA+AGG | - | chr1.4:20425872-20425891 | MS.gene052842:intron | 30.0% |
!!! | ACAATAACACATGGTTTTAG+GGG | - | chr1.4:20425279-20425298 | MS.gene052842:intron | 30.0% |
!!! | CTTTTAGTTTTCCGATACAA+AGG | - | chr1.4:20421165-20421184 | MS.gene052842:intron | 30.0% |
!!! | GCTTGTTTTGTCATTTTAAG+GGG | - | chr1.4:20425784-20425803 | MS.gene052842:intron | 30.0% |
AAACAGTCCACTTAAAGAGT+TGG | + | chr1.4:20420499-20420518 | None:intergenic | 35.0% | |
AAACTAAAAGATCTCCGCAT+CGG | + | chr1.4:20421155-20421174 | None:intergenic | 35.0% | |
AACCTCATGATGAAGGATAA+TGG | - | chr1.4:20424714-20424733 | MS.gene052842:CDS | 35.0% | |
AAGGAACATGACTTGAAAGT+TGG | - | chr1.4:20422455-20422474 | MS.gene052842:intron | 35.0% | |
ACAAATACTTGTTCAACGGT+CGG | - | chr1.4:20424049-20424068 | MS.gene052842:intron | 35.0% | |
ACAAATTCTTGCCAACCTTT+AGG | + | chr1.4:20425669-20425688 | None:intergenic | 35.0% | |
ACGCAATAAAATAGAGCTTG+GGG | + | chr1.4:20423948-20423967 | None:intergenic | 35.0% | |
AGAGAGAAGAAACAAGAACA+GGG | - | chr1.4:20424439-20424458 | MS.gene052842:intron | 35.0% | |
AGTGAAACTAGGATTCTCAT+TGG | + | chr1.4:20421848-20421867 | None:intergenic | 35.0% | |
ATAATACCTTGAAACTGCTC+TGG | + | chr1.4:20422563-20422582 | None:intergenic | 35.0% | |
ATTCACAATCACAATAGACG+TGG | - | chr1.4:20419986-20420005 | MS.gene052842:intron | 35.0% | |
ATTCATGCATGAAATGTGCA+AGG | + | chr1.4:20422235-20422254 | None:intergenic | 35.0% | |
CAAATCAGTTTCACATGGTT+TGG | - | chr1.4:20424101-20424120 | MS.gene052842:intron | 35.0% | |
CAAATTCTTGCCAACCTTTA+GGG | + | chr1.4:20425668-20425687 | None:intergenic | 35.0% | |
CAACGCAATAAAATAGAGCT+TGG | + | chr1.4:20423950-20423969 | None:intergenic | 35.0% | |
CAATCCATGTTGAAACTCAT+TGG | - | chr1.4:20420956-20420975 | MS.gene052842:intron | 35.0% | |
CACACACAAAGCTATATACA+TGG | + | chr1.4:20425479-20425498 | None:intergenic | 35.0% | |
CCATGATGAAAACAGTATTG+AGG | + | chr1.4:20420553-20420572 | None:intergenic | 35.0% | |
CTAAAAGTGATATATCTGCC+AGG | - | chr1.4:20425042-20425061 | MS.gene052842:CDS | 35.0% | |
GATAATATGAGAGTGAAGCT+AGG | + | chr1.4:20423069-20423088 | None:intergenic | 35.0% | |
GCTTTGATTAAAGATGATCG+AGG | + | chr1.4:20425994-20426013 | None:intergenic | 35.0% | |
GTCAGTGTGCAAAATGAATT+GGG | - | chr1.4:20421074-20421093 | MS.gene052842:intron | 35.0% | |
GTCATAAAACCTCATGATGA+AGG | - | chr1.4:20424707-20424726 | MS.gene052842:CDS | 35.0% | |
GTCTATTGTGATTGTGAATG+CGG | + | chr1.4:20419985-20420004 | None:intergenic | 35.0% | |
GTGAAACTAGGATTCTCATT+GGG | + | chr1.4:20421847-20421866 | None:intergenic | 35.0% | |
GTTGCTTACTGTTAATGTTG+TGG | + | chr1.4:20426025-20426044 | None:intergenic | 35.0% | |
TACATTAATAAAGTGGGTCC+AGG | + | chr1.4:20422836-20422855 | None:intergenic | 35.0% | |
TACTATCATCTCAACCACAA+AGG | - | chr1.4:20423686-20423705 | MS.gene052842:CDS | 35.0% | |
TACTATTATCCCAACCACAA+AGG | - | chr1.4:20422529-20422548 | MS.gene052842:intron | 35.0% | |
TATCTCTCTCCAAAATTCCT+TGG | + | chr1.4:20421009-20421028 | None:intergenic | 35.0% | |
TCAATACTCATCCACATAGA+GGG | + | chr1.4:20420816-20420835 | None:intergenic | 35.0% | |
TCTTGATGAACCTTGAGAAT+TGG | + | chr1.4:20425962-20425981 | None:intergenic | 35.0% | |
TGAGACAAATCAGTTTCACA+TGG | - | chr1.4:20424096-20424115 | MS.gene052842:intron | 35.0% | |
TGATTAAAGATGATCGAGGA+AGG | + | chr1.4:20425990-20426009 | None:intergenic | 35.0% | |
TGTGAGAGATTGCAAAGTAA+AGG | - | chr1.4:20425686-20425705 | MS.gene052842:intron | 35.0% | |
TGTGCAAAATCATGTGTTCA+AGG | - | chr1.4:20425740-20425759 | MS.gene052842:intron | 35.0% | |
TTATCACCATATCACGTTGA+AGG | - | chr1.4:20421874-20421893 | MS.gene052842:intron | 35.0% | |
TTCTGTCAAAATGGAATGAG+CGG | - | chr1.4:20424139-20424158 | MS.gene052842:intron | 35.0% | |
! | AAGGCAACAATTAGAAGTGT+TGG | - | chr1.4:20422347-20422366 | MS.gene052842:intron | 35.0% |
! | ACTTACCAGAAACTTTTTGC+TGG | + | chr1.4:20421467-20421486 | None:intergenic | 35.0% |
! | AGAGGCTTTCATTTTACTAG+AGG | - | chr1.4:20421966-20421985 | MS.gene052842:intron | 35.0% |
! | AGTATTTGTTACGGTTACGT+CGG | + | chr1.4:20424038-20424057 | None:intergenic | 35.0% |
! | ATTTTTGAATGGGAAGTGGT+TGG | - | chr1.4:20423577-20423596 | MS.gene052842:CDS | 35.0% |
! | CAAGCTCTATTTTATTGCGT+TGG | - | chr1.4:20423948-20423967 | MS.gene052842:intron | 35.0% |
! | CAGATGATTCCAAGGAATTT+TGG | - | chr1.4:20420997-20421016 | MS.gene052842:intron | 35.0% |
! | CCGTCATAGATCTTTTCATT+TGG | - | chr1.4:20420385-20420404 | MS.gene052842:CDS | 35.0% |
! | CCTCAATACTGTTTTCATCA+TGG | - | chr1.4:20420550-20420569 | MS.gene052842:intron | 35.0% |
! | CTAGTTCTTTATCTTGAAGC+TGG | + | chr1.4:20420057-20420076 | None:intergenic | 35.0% |
! | CTTACCAGAAACTTTTTGCT+GGG | + | chr1.4:20421466-20421485 | None:intergenic | 35.0% |
! | GCACAATAACACATGGTTTT+AGG | - | chr1.4:20425277-20425296 | MS.gene052842:intron | 35.0% |
! | GTGTTGTCTCTGATTTTTCT+TGG | + | chr1.4:20425203-20425222 | None:intergenic | 35.0% |
! | TAAAGTTTTGCAGAGGCTAA+TGG | - | chr1.4:20421748-20421767 | MS.gene052842:intron | 35.0% |
! | TAGTTTTCCGATACAAAGGA+GGG | - | chr1.4:20421169-20421188 | MS.gene052842:intron | 35.0% |
! | TCATGATGAAGGATAATGGT+GGG | - | chr1.4:20424718-20424737 | MS.gene052842:CDS | 35.0% |
! | TTCTGATTTTCCAACCTTGT+CGG | + | chr1.4:20425913-20425932 | None:intergenic | 35.0% |
! | TTTGGCTTCAAAATTGGAAG+AGG | - | chr1.4:20421115-20421134 | MS.gene052842:intron | 35.0% |
!! | AACAATTAGAAGTGTTGGAG+AGG | - | chr1.4:20422352-20422371 | MS.gene052842:intron | 35.0% |
!! | AACAATTAGAAGTGTTGGTG+AGG | - | chr1.4:20423506-20423525 | MS.gene052842:CDS | 35.0% |
!! | CATGAGGTTTTATGACAGTA+AGG | + | chr1.4:20424703-20424722 | None:intergenic | 35.0% |
!! | CTCTTTAAGTGGACTGTTTA+AGG | - | chr1.4:20420500-20420519 | MS.gene052842:CDS | 35.0% |
!! | GGAATTTTGGAGAGAGATAT+TGG | - | chr1.4:20421010-20421029 | MS.gene052842:intron | 35.0% |
!! | TGAGGTTTTATGACAGTAAG+GGG | + | chr1.4:20424701-20424720 | None:intergenic | 35.0% |
!! | TGGTTGGAAGTCATTTTCAA+AGG | - | chr1.4:20422436-20422455 | MS.gene052842:intron | 35.0% |
!! | TTAGTTTTCCGATACAAAGG+AGG | - | chr1.4:20421168-20421187 | MS.gene052842:intron | 35.0% |
!!! | AAAAGCGCATGTTTTAATCC+TGG | - | chr1.4:20422815-20422834 | MS.gene052842:intron | 35.0% |
!!! | AGTAGTTTTGTAATGACGCT+TGG | - | chr1.4:20422416-20422435 | MS.gene052842:intron | 35.0% |
!!! | GTTTTGGAGATGGAATTTCA+AGG | - | chr1.4:20425250-20425269 | MS.gene052842:intron | 35.0% |
AAAATCAGAAAGCAGGCCTA+AGG | - | chr1.4:20425923-20425942 | MS.gene052842:intron | 40.0% | |
AATCTGACCCTCCTTTGTAT+CGG | + | chr1.4:20421179-20421198 | None:intergenic | 40.0% | |
ACATACATTGGACAGTGTGT+AGG | + | chr1.4:20424262-20424281 | None:intergenic | 40.0% | |
ACATGTCCACAAACTTCTCA+GGG | + | chr1.4:20425163-20425182 | None:intergenic | 40.0% | |
AGAGATTGCAAAGTAAAGGC+TGG | - | chr1.4:20425690-20425709 | MS.gene052842:intron | 40.0% | |
AGGGATCTACTGAAGAAGTT+GGG | + | chr1.4:20425144-20425163 | None:intergenic | 40.0% | |
AGGTTGGAAAATCAGAAAGC+AGG | - | chr1.4:20425916-20425935 | MS.gene052842:intron | 40.0% | |
ATGAACATCTCGACTATGGT+TGG | - | chr1.4:20425640-20425659 | MS.gene052842:intron | 40.0% | |
ATGTATGTGTGCCATCAAAC+AGG | - | chr1.4:20424274-20424293 | MS.gene052842:CDS | 40.0% | |
ATTCTCATTGGGATGCTCAA+TGG | + | chr1.4:20421836-20421855 | None:intergenic | 40.0% | |
CAATACCTTGAAACTTCTCC+GGG | + | chr1.4:20423719-20423738 | None:intergenic | 40.0% | |
CACCATTATCCTTCATCATG+AGG | + | chr1.4:20424719-20424738 | None:intergenic | 40.0% | |
CAGAGAGAAGAAACAAGAAC+AGG | - | chr1.4:20424438-20424457 | MS.gene052842:intron | 40.0% | |
CCAGTTAAGGAAACATGCAT+GGG | + | chr1.4:20420144-20420163 | None:intergenic | 40.0% | |
CGCAATAAAATAGAGCTTGG+GGG | + | chr1.4:20423947-20423966 | None:intergenic | 40.0% | |
CGTTGAAGGTGATAGAAGAT+TGG | - | chr1.4:20421888-20421907 | MS.gene052842:intron | 40.0% | |
CTACTACTGTTACACCTCAA+CGG | - | chr1.4:20421403-20421422 | MS.gene052842:intron | 40.0% | |
CTATCACCTTCAACGTGATA+TGG | + | chr1.4:20421883-20421902 | None:intergenic | 40.0% | |
GAAGAAGAAGAAAGTGAGTG+TGG | + | chr1.4:20420088-20420107 | None:intergenic | 40.0% | |
GAATGAGTTATTGCAAGGGA+AGG | - | chr1.4:20422328-20422347 | MS.gene052842:intron | 40.0% | |
GACATGATTCCTTTGTGGTT+GGG | + | chr1.4:20422541-20422560 | None:intergenic | 40.0% | |
GAGATGAGAGATATACAGAG+AGG | - | chr1.4:20424480-20424499 | MS.gene052842:intron | 40.0% | |
GCAATACCTTGAAACTTCTC+CGG | + | chr1.4:20423720-20423739 | None:intergenic | 40.0% | |
GCATGTTTCCTTAACTGGAA+TGG | - | chr1.4:20420146-20420165 | MS.gene052842:intron | 40.0% | |
GGTCAGTGTGCAAAATGAAT+TGG | - | chr1.4:20421073-20421092 | MS.gene052842:intron | 40.0% | |
GGTCATACCAACTCTTTAAG+TGG | - | chr1.4:20420489-20420508 | MS.gene052842:CDS | 40.0% | |
GTCAATACTCATCCACATAG+AGG | + | chr1.4:20420817-20420836 | None:intergenic | 40.0% | |
GTTGTGGGTAGTGTAAATTG+TGG | - | chr1.4:20424740-20424759 | MS.gene052842:CDS | 40.0% | |
TAAGATACATCCGACAAGGT+TGG | - | chr1.4:20425900-20425919 | MS.gene052842:intron | 40.0% | |
TCCAGTTAAGGAAACATGCA+TGG | + | chr1.4:20420145-20420164 | None:intergenic | 40.0% | |
TGATGAACCTTGAGAATTGG+AGG | + | chr1.4:20425959-20425978 | None:intergenic | 40.0% | |
TGTATGTGTGCCATCAAACA+GGG | - | chr1.4:20424275-20424294 | MS.gene052842:CDS | 40.0% | |
TGTTCTTGCAGATGATTCCA+AGG | - | chr1.4:20420989-20421008 | MS.gene052842:intron | 40.0% | |
TTATCGGCATGTCATGTTGA+AGG | - | chr1.4:20423084-20423103 | MS.gene052842:intron | 40.0% | |
TTGTCAATGTTAGTCCGTTG+AGG | + | chr1.4:20421420-20421439 | None:intergenic | 40.0% | |
TTTAAACCACGACCTGAAAC+AGG | - | chr1.4:20423428-20423447 | MS.gene052842:intron | 40.0% | |
TTTATACCACGACCTGAAAC+AGG | - | chr1.4:20422274-20422293 | MS.gene052842:intron | 40.0% | |
TTTGTTCCTAACTGTGTGAG+AGG | - | chr1.4:20421948-20421967 | MS.gene052842:intron | 40.0% | |
! | AGTAGCAATGCCATTTGAGT+TGG | + | chr1.4:20421385-20421404 | None:intergenic | 40.0% |
! | ATAGAATATGCGGGCAGTTT+TGG | - | chr1.4:20425234-20425253 | MS.gene052842:intron | 40.0% |
! | ATTTTGCACACTGACCCATT+TGG | + | chr1.4:20421069-20421088 | None:intergenic | 40.0% |
! | CAGTAATAAGTGGATGGGTT+CGG | + | chr1.4:20424168-20424187 | None:intergenic | 40.0% |
! | CAGTTTCACATGGTTTGGAA+CGG | - | chr1.4:20424106-20424125 | MS.gene052842:intron | 40.0% |
! | CTCATGATGAAGGATAATGG+TGG | - | chr1.4:20424717-20424736 | MS.gene052842:CDS | 40.0% |
! | CTGATTTTTCTTGGACTCCT+TGG | + | chr1.4:20425194-20425213 | None:intergenic | 40.0% |
! | CTGTTCTTGTTTCTTCTCTC+TGG | + | chr1.4:20424440-20424459 | None:intergenic | 40.0% |
! | GGTTCACGTTTTCTGATCTA+CGG | - | chr1.4:20424619-20424638 | MS.gene052842:CDS | 40.0% |
! | GTTCACGTTTTCTGATCTAC+GGG | - | chr1.4:20424620-20424639 | MS.gene052842:CDS | 40.0% |
! | GTTTGATGGCACACATACAT+TGG | + | chr1.4:20424274-20424293 | None:intergenic | 40.0% |
! | GTTTTGTAATGACGCTTGGT+TGG | - | chr1.4:20422420-20422439 | MS.gene052842:intron | 40.0% |
! | TGAAGTTTTGCAGAGGCTAA+TGG | - | chr1.4:20422967-20422986 | MS.gene052842:CDS | 40.0% |
! | TTGTTTCTTCTCTCTGGTAG+TGG | + | chr1.4:20424434-20424453 | None:intergenic | 40.0% |
!! | AATTAGAAGTGTTGGTGAGG+TGG | - | chr1.4:20423509-20423528 | MS.gene052842:CDS | 40.0% |
!! | ATGTGGATGAGTATTGACCT+TGG | - | chr1.4:20420819-20420838 | MS.gene052842:intron | 40.0% |
!! | GTGGTTGGAAGTCATTTTCA+CGG | - | chr1.4:20423592-20423611 | MS.gene052842:CDS | 40.0% |
!! | TGGTTGGAAGTCATTTTCAC+GGG | - | chr1.4:20423593-20423612 | MS.gene052842:CDS | 40.0% |
AAACTGACGTTGAAACGGTC+GGG | - | chr1.4:20424593-20424612 | MS.gene052842:intron | 45.0% | |
AAGAGAACCGCCAACTCAAA+TGG | - | chr1.4:20421372-20421391 | MS.gene052842:intron | 45.0% | |
AATTCCGTGGAGTTGAGAGT+AGG | - | chr1.4:20425585-20425604 | MS.gene052842:intron | 45.0% | |
AGGAGCTGCACAATAACACA+TGG | - | chr1.4:20425270-20425289 | MS.gene052842:intron | 45.0% | |
AGTGAAGCTAGGGTTCTCAT+TGG | + | chr1.4:20423058-20423077 | None:intergenic | 45.0% | |
AGTGCTACACAGCATGACTT+TGG | - | chr1.4:20420788-20420807 | MS.gene052842:intron | 45.0% | |
ATCTCAACCACAAAGGAACC+AGG | - | chr1.4:20423693-20423712 | MS.gene052842:CDS | 45.0% | |
ATGTGTAGAGTGTGTGTTCG+TGG | - | chr1.4:20424835-20424854 | MS.gene052842:CDS | 45.0% | |
ATTCCGTGGAGTTGAGAGTA+GGG | - | chr1.4:20425586-20425605 | MS.gene052842:intron | 45.0% | |
CACATGTCCACAAACTTCTC+AGG | + | chr1.4:20425164-20425183 | None:intergenic | 45.0% | |
CACCGAAACTGACGTTGAAA+CGG | - | chr1.4:20424588-20424607 | MS.gene052842:intron | 45.0% | |
CAGGGATCTACTGAAGAAGT+TGG | + | chr1.4:20425145-20425164 | None:intergenic | 45.0% | |
CCACTAAGATACATCCGACA+AGG | - | chr1.4:20425896-20425915 | MS.gene052842:intron | 45.0% | |
CCCATGCATGTTTCCTTAAC+TGG | - | chr1.4:20420141-20420160 | MS.gene052842:intron | 45.0% | |
CCTTGTCGGATGTATCTTAG+TGG | + | chr1.4:20425899-20425918 | None:intergenic | 45.0% | |
CGAAAGCGGTTCTGTCAAAA+TGG | - | chr1.4:20424130-20424149 | MS.gene052842:intron | 45.0% | |
CTCTGGACATGATTCCTTTG+TGG | + | chr1.4:20422546-20422565 | None:intergenic | 45.0% | |
GAAACTGACGTTGAAACGGT+CGG | - | chr1.4:20424592-20424611 | MS.gene052842:intron | 45.0% | |
GACCGTTTCAACGTCAGTTT+CGG | + | chr1.4:20424593-20424612 | None:intergenic | 45.0% | |
GATGCTTCCTCCAATTCTCA+AGG | - | chr1.4:20425949-20425968 | MS.gene052842:intron | 45.0% | |
GCAACCCAGCAAAAAGTTTC+TGG | - | chr1.4:20421459-20421478 | MS.gene052842:intron | 45.0% | |
GGACATGATTCCTTTGTGGT+TGG | + | chr1.4:20422542-20422561 | None:intergenic | 45.0% | |
GGGATCTACTGAAGAAGTTG+GGG | + | chr1.4:20425143-20425162 | None:intergenic | 45.0% | |
GTAGATCCCTGAGAAGTTTG+TGG | - | chr1.4:20425154-20425173 | MS.gene052842:intron | 45.0% | |
GTGAAGCTAGGGTTCTCATT+GGG | + | chr1.4:20423057-20423076 | None:intergenic | 45.0% | |
GTTACGGTTACGTCGGATTT+CGG | + | chr1.4:20424031-20424050 | None:intergenic | 45.0% | |
TAATGGAAACACAGGAGGCA+TGG | - | chr1.4:20421765-20421784 | MS.gene052842:intron | 45.0% | |
TCAAGACACACCCTGTTTGA+TGG | + | chr1.4:20424288-20424307 | None:intergenic | 45.0% | |
TCATGTCCAGAGCAGTTTCA+AGG | - | chr1.4:20422554-20422573 | MS.gene052842:intron | 45.0% | |
TCTGATCTACGGGTGTTCTT+CGG | - | chr1.4:20424630-20424649 | MS.gene052842:CDS | 45.0% | |
TGAAACAGGCGATACCTAGT+TGG | - | chr1.4:20422288-20422307 | MS.gene052842:intron | 45.0% | |
TGAAAGCCTCTCACACAGTT+AGG | + | chr1.4:20421957-20421976 | None:intergenic | 45.0% | |
TGCAGAGGCTAATGGAAACA+GGG | - | chr1.4:20421756-20421775 | MS.gene052842:intron | 45.0% | |
TGCTTCTTCAACAGCTCACA+TGG | + | chr1.4:20425549-20425568 | None:intergenic | 45.0% | |
TGGACATGTGCAGAAAACCA+AGG | - | chr1.4:20425174-20425193 | MS.gene052842:intron | 45.0% | |
TGTGAGCTGTTGAAGAAGCA+TGG | - | chr1.4:20425549-20425568 | MS.gene052842:intron | 45.0% | |
TTCTTCGGTGAGCAGTTGTT+GGG | - | chr1.4:20424645-20424664 | MS.gene052842:CDS | 45.0% | |
TTGCAGAGGCTAATGGAAAC+AGG | - | chr1.4:20421755-20421774 | MS.gene052842:intron | 45.0% | |
TTGGTGAGGTGGATAGAACA+TGG | - | chr1.4:20423520-20423539 | MS.gene052842:CDS | 45.0% | |
! | AACTAGGTATCGCCTGTTTC+AGG | + | chr1.4:20422289-20422308 | None:intergenic | 45.0% |
! | AATGGAAACACAGGAGGCAT+GGG | - | chr1.4:20421766-20421785 | MS.gene052842:intron | 45.0% |
! | ATGGTTGGTTCCCTAAAGGT+TGG | - | chr1.4:20425655-20425674 | MS.gene052842:intron | 45.0% |
! | CGGGAACATAACTTGCAAGT+CGG | - | chr1.4:20423612-20423631 | MS.gene052842:CDS | 45.0% |
! | GACTATGGTTGGTTCCCTAA+AGG | - | chr1.4:20425651-20425670 | MS.gene052842:intron | 45.0% |
! | GCGGTTCTCTTTTTCTTGAG+GGG | + | chr1.4:20421363-20421382 | None:intergenic | 45.0% |
! | GGAAGGAACATGGTTTGTAG+AGG | - | chr1.4:20425608-20425627 | MS.gene052842:intron | 45.0% |
! | GGCGGTTCTCTTTTTCTTGA+GGG | + | chr1.4:20421364-20421383 | None:intergenic | 45.0% |
! | TCGACTTGTGCTCAATCACT+TGG | - | chr1.4:20420468-20420487 | MS.gene052842:CDS | 45.0% |
! | TGACGGGTCTAACGGAATAA+CGG | + | chr1.4:20424566-20424585 | None:intergenic | 45.0% |
! | TGACTTTGGTTCCCTCTATG+TGG | - | chr1.4:20420802-20420821 | MS.gene052842:intron | 45.0% |
! | TGGCGGTTCTCTTTTTCTTG+AGG | + | chr1.4:20421365-20421384 | None:intergenic | 45.0% |
! | TTTGCAAGTTTGCTCCGATG+CGG | - | chr1.4:20421138-20421157 | MS.gene052842:intron | 45.0% |
!! | AGCAATGCCATTTGAGTTGG+CGG | + | chr1.4:20421382-20421401 | None:intergenic | 45.0% |
!! | GAAGGATAATGGTGGGTTGT+GGG | - | chr1.4:20424725-20424744 | MS.gene052842:CDS | 45.0% |
!! | TAGAAGTGTTGGAGAGGACA+GGG | - | chr1.4:20422358-20422377 | MS.gene052842:intron | 45.0% |
!! | TGAAGGATAATGGTGGGTTG+TGG | - | chr1.4:20424724-20424743 | MS.gene052842:CDS | 45.0% |
!! | TGGAGGAAGCATCATACCTT+AGG | + | chr1.4:20425942-20425961 | None:intergenic | 45.0% |
!! | TTAGAAGTGTTGGAGAGGAC+AGG | - | chr1.4:20422357-20422376 | MS.gene052842:intron | 45.0% |
!! | TTCTTCTCTCTGGTAGTGGT+GGG | + | chr1.4:20424430-20424449 | None:intergenic | 45.0% |
!! | TTTCTTCTCTCTGGTAGTGG+TGG | + | chr1.4:20424431-20424450 | None:intergenic | 45.0% |
!! | AAAAATATACATAAATAAAA+TGG | + | chr1.4:20421638-20421657 | None:intergenic | 5.0% |
!! | AAAATATACATAAATAAAAT+GGG | + | chr1.4:20421637-20421656 | None:intergenic | 5.0% |
ACGTCAGTTTCGGTGGATGA+CGG | + | chr1.4:20424583-20424602 | None:intergenic | 50.0% | |
AGACGTGGCAGTGAAGCTAA+AGG | - | chr1.4:20420001-20420020 | MS.gene052842:intron | 50.0% | |
CGTTTCAACGTCAGTTTCGG+TGG | + | chr1.4:20424590-20424609 | None:intergenic | 50.0% | |
GACGGGTCTAACGGAATAAC+GGG | + | chr1.4:20424565-20424584 | None:intergenic | 50.0% | |
GAGGCTAATGGAAACACAGG+AGG | - | chr1.4:20421760-20421779 | MS.gene052842:intron | 50.0% | |
GCAGAGGCTAATGGAAACAC+AGG | - | chr1.4:20421757-20421776 | MS.gene052842:intron | 50.0% | |
GTTCAACGGTCGGATGTGTA+CGG | - | chr1.4:20424059-20424078 | MS.gene052842:intron | 50.0% | |
GTTCTTCGGTGAGCAGTTGT+TGG | - | chr1.4:20424644-20424663 | MS.gene052842:CDS | 50.0% | |
TGAAAGCCTCTCACACAGCT+AGG | + | chr1.4:20423170-20423189 | None:intergenic | 50.0% | |
TGAGAGTAGGGGAAGGAACA+TGG | - | chr1.4:20425598-20425617 | MS.gene052842:intron | 50.0% | |
TGCAACGCAGCGATGGTATT+TGG | - | chr1.4:20421097-20421116 | MS.gene052842:intron | 50.0% | |
TGCAACTGTGTTCTTCCCGT+TGG | - | chr1.4:20425855-20425874 | MS.gene052842:intron | 50.0% | |
TTCAACGGTCGGATGTGTAC+GGG | - | chr1.4:20424060-20424079 | MS.gene052842:intron | 50.0% | |
TTCCCCTACTCTCAACTCCA+CGG | + | chr1.4:20425592-20425611 | None:intergenic | 50.0% | |
TTCCGTGGAGTTGAGAGTAG+GGG | - | chr1.4:20425587-20425606 | MS.gene052842:intron | 50.0% | |
TTTGTGCCTAGCTGTGTGAG+AGG | - | chr1.4:20423161-20423180 | MS.gene052842:intron | 50.0% | |
! | TGGTTTGGAACGGACGAAAG+CGG | - | chr1.4:20424116-20424135 | MS.gene052842:intron | 50.0% |
!! | GGTCTAACGGAATAACGGGT+GGG | + | chr1.4:20424561-20424580 | None:intergenic | 50.0% |
!!! | TATGCGGGCAGTTTTGGAGA+TGG | - | chr1.4:20425240-20425259 | MS.gene052842:intron | 50.0% |
AACCACAAAGGAACCAGGCC+CGG | - | chr1.4:20423698-20423717 | MS.gene052842:CDS | 55.0% | |
AATTGGGTGCAACGCAGCGA+TGG | - | chr1.4:20421090-20421109 | MS.gene052842:intron | 55.0% | |
CGGTTACGTCGGATTTCGGT+CGG | + | chr1.4:20424027-20424046 | None:intergenic | 55.0% | |
CGTCAGTTTCGGTGGATGAC+GGG | + | chr1.4:20424582-20424601 | None:intergenic | 55.0% | |
GACGTTGAAACGGTCGGGAA+TGG | - | chr1.4:20424598-20424617 | MS.gene052842:intron | 55.0% | |
GTGGAGTTGAGAGTAGGGGA+AGG | - | chr1.4:20425591-20425610 | MS.gene052842:intron | 55.0% | |
TACAACCGAGCCAAACCACC+CGG | - | chr1.4:20424535-20424554 | MS.gene052842:intron | 55.0% | |
TGACAGTAAGGGGTGAGCAC+CGG | + | chr1.4:20424691-20424710 | None:intergenic | 55.0% | |
! | GGGTCTAACGGAATAACGGG+TGG | + | chr1.4:20424562-20424581 | None:intergenic | 55.0% |
! | GTATCGCCTGTTTCAGGTCG+TGG | + | chr1.4:20422283-20422302 | None:intergenic | 55.0% |
!! | AGCTTGGGGGACTAGCTGAA+GGG | + | chr1.4:20423934-20423953 | None:intergenic | 55.0% |
!! | TAACGGAATAACGGGTGGGC+CGG | + | chr1.4:20424557-20424576 | None:intergenic | 55.0% |
!! | TCGGTGGATGACGGGTCTAA+CGG | + | chr1.4:20424574-20424593 | None:intergenic | 55.0% |
CCAGGCCCGGAGAAGTTTCA+AGG | - | chr1.4:20423711-20423730 | MS.gene052842:CDS | 60.0% | |
CCTTGAAACTTCTCCGGGCC+TGG | + | chr1.4:20423714-20423733 | None:intergenic | 60.0% | |
GTGTTGGAGAGGACAGGGCA+TGG | - | chr1.4:20422363-20422382 | MS.gene052842:intron | 60.0% | |
!! | AACGGAATAACGGGTGGGCC+GGG | + | chr1.4:20424556-20424575 | None:intergenic | 60.0% |
!! | AGTAAGGGGTGAGCACCGGT+CGG | + | chr1.4:20424687-20424706 | None:intergenic | 60.0% |
!! | GAGCTTGGGGGACTAGCTGA+AGG | + | chr1.4:20423935-20423954 | None:intergenic | 60.0% |
CGAATCCGCCCGTAACCGAC+CGG | - | chr1.4:20424669-20424688 | MS.gene052842:CDS | 65.0% | |
CTCCGGGCCTGGTTCCTTTG+TGG | + | chr1.4:20423703-20423722 | None:intergenic | 65.0% | |
TCTCACACTTCACGCGCGCG+TGG | + | chr1.4:20424212-20424231 | None:intergenic | 65.0% | |
! | CGGTCGGTTACGGGCGGATT+CGG | + | chr1.4:20424671-20424690 | None:intergenic | 65.0% |
! | GGTCGGATGTGTACGGGCTG+CGG | - | chr1.4:20424066-20424085 | MS.gene052842:intron | 65.0% |
!! | GGGTGAGCACCGGTCGGTTA+CGG | + | chr1.4:20424681-20424700 | None:intergenic | 65.0% |
!! | GGTGAGCACCGGTCGGTTAC+GGG | + | chr1.4:20424680-20424699 | None:intergenic | 65.0% |
AACGGGTGGGCCGGGTGGTT+TGG | + | chr1.4:20424548-20424567 | None:intergenic | 70.0% | |
! | GTGGGCCGGGTGGTTTGGCT+CGG | + | chr1.4:20424543-20424562 | None:intergenic | 70.0% |
!! | GAGCACCGGTCGGTTACGGG+CGG | + | chr1.4:20424677-20424696 | None:intergenic | 70.0% |
!! | GGAATAACGGGTGGGCCGGG+TGG | + | chr1.4:20424553-20424572 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 20419959 | 20426120 | 20419959 | ID=MS.gene052842 |
chr1.4 | mRNA | 20419959 | 20426120 | 20419959 | ID=MS.gene052842.t1;Parent=MS.gene052842 |
chr1.4 | exon | 20426004 | 20426120 | 20426004 | ID=MS.gene052842.t1.exon1;Parent=MS.gene052842.t1 |
chr1.4 | CDS | 20426004 | 20426120 | 20426004 | ID=cds.MS.gene052842.t1;Parent=MS.gene052842.t1 |
chr1.4 | exon | 20424599 | 20425079 | 20424599 | ID=MS.gene052842.t1.exon2;Parent=MS.gene052842.t1 |
chr1.4 | CDS | 20424599 | 20425079 | 20424599 | ID=cds.MS.gene052842.t1;Parent=MS.gene052842.t1 |
chr1.4 | exon | 20424170 | 20424318 | 20424170 | ID=MS.gene052842.t1.exon3;Parent=MS.gene052842.t1 |
chr1.4 | CDS | 20424170 | 20424318 | 20424170 | ID=cds.MS.gene052842.t1;Parent=MS.gene052842.t1 |
chr1.4 | exon | 20423504 | 20423783 | 20423504 | ID=MS.gene052842.t1.exon4;Parent=MS.gene052842.t1 |
chr1.4 | CDS | 20423504 | 20423783 | 20423504 | ID=cds.MS.gene052842.t1;Parent=MS.gene052842.t1 |
chr1.4 | exon | 20422960 | 20423057 | 20422960 | ID=MS.gene052842.t1.exon5;Parent=MS.gene052842.t1 |
chr1.4 | CDS | 20422960 | 20423057 | 20422960 | ID=cds.MS.gene052842.t1;Parent=MS.gene052842.t1 |
chr1.4 | exon | 20420318 | 20420545 | 20420318 | ID=MS.gene052842.t1.exon6;Parent=MS.gene052842.t1 |
chr1.4 | CDS | 20420318 | 20420545 | 20420318 | ID=cds.MS.gene052842.t1;Parent=MS.gene052842.t1 |
chr1.4 | exon | 20420044 | 20420148 | 20420044 | ID=MS.gene052842.t1.exon7;Parent=MS.gene052842.t1 |
chr1.4 | CDS | 20420044 | 20420148 | 20420044 | ID=cds.MS.gene052842.t1;Parent=MS.gene052842.t1 |
chr1.4 | exon | 20419959 | 20419967 | 20419959 | ID=MS.gene052842.t1.exon8;Parent=MS.gene052842.t1 |
chr1.4 | CDS | 20419959 | 20419967 | 20419959 | ID=cds.MS.gene052842.t1;Parent=MS.gene052842.t1 |
Gene Sequence |
Protein sequence |