AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012206

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012206.t1 MTR_4g125300 98.571 350 5 0 1 350 1 350 0.0 726
MS.gene012206.t1 MTR_3g075390 38.630 365 186 11 1 348 1 344 2.68e-73 231
MS.gene012206.t1 MTR_4g094918 42.997 307 154 9 57 348 41 341 5.28e-73 231
MS.gene012206.t1 MTR_4g047610 43.366 309 156 12 53 348 40 342 5.13e-72 228
MS.gene012206.t1 MTR_5g022560 41.883 308 162 10 53 348 41 343 2.01e-71 226
MS.gene012206.t1 MTR_4g079470 42.434 304 157 11 57 348 47 344 5.28e-71 225
MS.gene012206.t1 MTR_4g079770 42.434 304 157 11 57 348 47 344 5.45e-71 225
MS.gene012206.t1 MTR_1g107550 41.265 332 175 10 31 348 30 355 2.74e-70 227
MS.gene012206.t1 MTR_4g079440 41.311 305 168 6 51 349 46 345 7.71e-70 222
MS.gene012206.t1 MTR_4g079800 42.434 304 157 12 57 348 47 344 1.20e-69 221
MS.gene012206.t1 MTR_4g080700 38.080 323 183 9 34 348 26 339 1.37e-69 221
MS.gene012206.t1 MTR_4g080730 39.604 303 171 7 53 348 42 339 6.13e-69 219
MS.gene012206.t1 MTR_3g116080 40.391 307 168 8 51 348 47 347 4.05e-68 218
MS.gene012206.t1 MTR_4g107930 40.909 308 165 10 53 348 42 344 2.28e-66 213
MS.gene012206.t1 MTR_1g018840 38.227 361 190 12 6 348 16 361 3.76e-66 216
MS.gene012206.t1 MTR_1g018840 38.122 362 191 12 5 348 15 361 3.90e-66 216
MS.gene012206.t1 MTR_3g102220 41.667 312 153 12 57 348 59 361 1.67e-65 214
MS.gene012206.t1 MTR_2g015920 33.613 357 214 8 6 348 11 358 2.33e-65 211
MS.gene012206.t1 MTR_4g071060 38.292 363 184 11 6 345 8 353 5.36e-65 210
MS.gene012206.t1 MTR_3g112430 39.744 312 168 9 51 348 36 341 5.47e-65 212
MS.gene012206.t1 MTR_4g104370 41.472 299 154 9 64 348 52 343 2.51e-64 208
MS.gene012206.t1 MTR_2g090890 40.132 304 170 7 51 348 39 336 1.91e-63 205
MS.gene012206.t1 MTR_4g080360 37.462 331 178 13 34 348 24 341 3.46e-63 204
MS.gene012206.t1 MTR_2g075830 40.728 302 163 10 57 348 45 340 2.64e-62 202
MS.gene012206.t1 MTR_1g023210 38.279 337 177 10 28 345 33 357 1.44e-61 201
MS.gene012206.t1 MTR_2g016270 37.785 307 165 8 51 348 51 340 8.04e-60 199
MS.gene012206.t1 MTR_2g016180 37.419 310 177 8 51 348 51 355 2.03e-58 196
MS.gene012206.t1 MTR_2g015850 40.924 303 151 14 63 349 74 364 7.25e-58 191
MS.gene012206.t1 MTR_1g094135 35.342 365 204 11 7 350 15 368 2.08e-57 191
MS.gene012206.t1 MTR_7g078600 37.908 306 174 9 51 349 42 338 6.06e-57 188
MS.gene012206.t1 MTR_2g083930 36.420 324 179 11 45 349 29 344 7.26e-57 188
MS.gene012206.t1 MTR_2g015930 31.476 359 217 9 6 348 13 358 2.85e-55 185
MS.gene012206.t1 MTR_7g079230 38.689 305 162 11 57 349 45 336 3.04e-55 184
MS.gene012206.t1 MTR_4g065077 32.597 362 222 9 1 348 3 356 1.50e-51 175
MS.gene012206.t1 MTR_2g067900 35.455 330 174 13 44 349 13 327 2.13e-47 163
MS.gene012206.t1 MTR_4g072790 33.429 347 186 9 4 345 11 317 2.42e-46 160
MS.gene012206.t1 MTR_8g086470 31.006 358 217 9 1 348 19 356 5.14e-45 158
MS.gene012206.t1 MTR_4g073660 33.523 352 183 11 4 345 10 320 2.47e-44 155
MS.gene012206.t1 MTR_4g072340 32.955 352 185 10 4 345 11 321 5.08e-44 154
MS.gene012206.t1 MTR_2g067560 34.259 324 163 12 51 341 16 322 2.07e-43 160
MS.gene012206.t1 MTR_2g064475 32.964 361 172 16 41 349 10 352 3.04e-41 148
MS.gene012206.t1 MTR_2g066980 30.435 345 168 14 34 350 20 320 9.53e-37 135
MS.gene012206.t1 MTR_1g023810 39.091 220 121 7 133 346 49 261 3.61e-36 132
MS.gene012206.t1 MTR_7g111060 32.573 307 169 11 66 340 30 330 5.76e-35 131
MS.gene012206.t1 MTR_7g111050 32.609 322 179 15 49 340 14 327 4.29e-32 123
MS.gene012206.t1 MTR_7g078630 33.700 273 141 8 44 305 699 942 1.80e-31 125
MS.gene012206.t1 MTR_7g111050 30.169 295 171 13 48 314 9 296 3.66e-20 89.7
MS.gene012206.t1 MTR_3g029560 29.907 214 116 8 145 349 50 238 3.61e-19 85.9
MS.gene012206.t1 MTR_7g078580 42.157 102 49 5 252 348 5 101 2.43e-18 80.5
MS.gene012206.t1 MTR_1g025450 32.203 177 94 5 133 306 55 208 4.21e-18 85.9
MS.gene012206.t1 MTR_7g078310 36.765 136 80 3 92 225 115 246 2.70e-16 78.2
MS.gene012206.t1 MTR_2g015840 31.902 163 94 5 38 186 20 179 5.26e-16 77.4
MS.gene012206.t1 MTR_2g015840 40.171 117 60 5 238 349 161 272 5.91e-16 77.4
MS.gene012206.t1 MTR_7g079130 43.478 92 42 5 263 348 10 97 1.33e-15 72.0
MS.gene012206.t1 MTR_8g087510 35.115 131 79 4 175 305 24 148 2.75e-15 73.6
MS.gene012206.t1 MTR_2g016380 32.787 122 74 4 231 347 16 134 1.51e-14 72.8
MS.gene012206.t1 MTR_2g047960 46.250 80 42 1 142 221 7 85 9.07e-14 67.0
MS.gene012206.t1 MTR_3g082370 26.389 216 140 8 138 340 5 214 9.74e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012206.t1 AT3G45310 72.881 354 90 2 1 350 7 358 0.0 556
MS.gene012206.t1 AT3G45310 72.599 354 90 3 1 350 7 357 0.0 550
MS.gene012206.t1 AT5G60360 74.925 335 80 1 20 350 24 358 0.0 543
MS.gene012206.t1 AT5G60360 74.627 335 80 2 20 350 24 357 0.0 537
MS.gene012206.t1 AT5G60360 74.691 324 78 1 20 339 24 347 0.0 522
MS.gene012206.t1 AT5G43060 46.048 291 141 9 67 348 70 353 1.14e-72 233
MS.gene012206.t1 AT3G48340 42.667 300 151 8 64 348 50 343 5.81e-72 228
MS.gene012206.t1 AT1G47128 38.440 359 193 12 5 348 7 352 7.13e-72 231
MS.gene012206.t1 AT5G50260 38.655 357 184 11 6 348 7 342 7.94e-70 223
MS.gene012206.t1 AT4G11310 37.222 360 192 9 6 348 10 352 1.56e-68 219
MS.gene012206.t1 AT4G36880 42.140 299 150 10 67 348 69 361 2.39e-68 219
MS.gene012206.t1 AT4G35350 41.558 308 164 9 51 348 51 352 2.74e-68 218
MS.gene012206.t1 AT3G54940 38.333 360 191 9 1 340 6 354 4.70e-68 218
MS.gene012206.t1 AT1G06260 39.031 351 185 10 7 348 12 342 8.41e-68 217
MS.gene012206.t1 AT3G19400 42.857 301 153 10 60 347 53 347 1.21e-67 217
MS.gene012206.t1 AT4G11320 38.838 327 170 7 40 348 45 359 1.67e-67 217
MS.gene012206.t1 AT4G11320 38.838 327 170 7 40 348 45 359 1.67e-67 217
MS.gene012206.t1 AT4G23520 40.323 310 166 10 51 348 47 349 2.87e-67 216
MS.gene012206.t1 AT1G20850 40.000 310 167 9 51 348 51 353 1.53e-66 214
MS.gene012206.t1 AT5G45890 40.367 327 167 11 40 349 31 346 7.51e-66 212
MS.gene012206.t1 AT1G09850 39.286 308 171 8 51 348 32 333 2.45e-64 211
MS.gene012206.t1 AT3G19390 42.000 300 157 11 60 348 52 345 8.44e-64 209
MS.gene012206.t1 AT3G48350 38.187 364 181 14 4 348 5 343 2.58e-63 206
MS.gene012206.t1 AT1G29080 41.234 308 158 11 57 348 45 345 2.02e-62 203
MS.gene012206.t1 AT2G21430 37.059 340 187 8 28 345 20 354 1.39e-60 199
MS.gene012206.t1 AT1G29090 37.396 361 182 15 5 348 21 354 3.71e-60 197
MS.gene012206.t1 AT4G39090 38.769 325 170 9 40 345 43 357 1.40e-59 196
MS.gene012206.t1 AT2G34080 39.498 319 165 14 46 348 38 344 8.78e-59 193
MS.gene012206.t1 AT3G43960 40.594 303 162 11 59 348 49 346 1.48e-58 194
MS.gene012206.t1 AT4G16190 36.765 340 185 11 26 345 34 363 1.35e-55 186
MS.gene012206.t1 AT3G49340 37.500 312 171 11 53 348 37 340 2.09e-55 184
MS.gene012206.t1 AT2G27420 37.700 313 168 12 57 348 41 347 6.08e-55 184
MS.gene012206.t1 AT1G29110 37.061 313 161 11 53 348 40 333 1.58e-52 177
MS.gene012206.t1 AT4G35350 43.096 239 127 7 51 283 51 286 3.79e-50 169
MS.gene012206.t1 AT3G54940 37.589 282 157 5 1 271 6 279 1.91e-48 164
MS.gene012206.t1 AT3G19400 42.358 229 121 7 60 279 53 279 5.35e-46 159
MS.gene012206.t1 AT3G48350 36.577 298 154 10 4 287 5 281 5.52e-43 151
MS.gene012206.t1 AT1G02305 33.677 291 157 11 80 340 49 333 3.79e-34 129
MS.gene012206.t1 AT1G02300 37.089 213 102 8 152 340 146 350 5.25e-31 121
MS.gene012206.t1 AT4G01610 31.629 313 174 13 59 340 27 330 1.06e-30 120
MS.gene012206.t1 AT4G01610 30.990 313 176 13 59 340 27 330 1.04e-28 114

Find 87 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCGGATCATGCTGGACATTC+AGG 0.322819 8.3:+4678043 MS.gene012206:CDS
CTGCAGCACAACTGGAGCTT+TGG 0.347290 8.3:+4678585 MS.gene012206:intron
TATCCCTACACTGGACAAAA+TGG 0.356510 8.3:+4678769 MS.gene012206:CDS
GCTCAATCCGGCGGCGGCGG+TGG 0.358129 8.3:-4676345 None:intergenic
ACTGTCATCTGCAGCACAAC+TGG 0.364159 8.3:+4678577 MS.gene012206:intron
TGGCTACTTCAAAATGGAAA+TGG 0.373295 8.3:+4679586 MS.gene012206:CDS
TGACCATGGCTACTTCAAAA+TGG 0.374145 8.3:+4679580 MS.gene012206:CDS
GTTATTGTATGCAGAAAGAT+TGG 0.377542 8.3:+4677977 MS.gene012206:intron
AGGTATAGTCAGTGAAGTTA+AGG 0.383706 8.3:+4678008 MS.gene012206:CDS
CATGGAAAAGCAGCTTCTTC+AGG 0.383850 8.3:+4676403 MS.gene012206:CDS
ACCTCAAATGCCACACTAAC+GGG 0.384523 8.3:-4679226 None:intergenic
GCTGTTCTTGCTGTTGGGTA+TGG 0.386199 8.3:+4679500 MS.gene012206:CDS
TGCGTGGCCACCGCCGCCGC+CGG 0.394631 8.3:+4676338 MS.gene012206:CDS
GGCTACTTCAAAATGGAAAT+GGG 0.395439 8.3:+4679587 MS.gene012206:CDS
AAACTCATGGGGAGGTGAAT+GGG 0.395979 8.3:+4679556 MS.gene012206:CDS
TTTAATGTATTCAAAGGCTT+GGG 0.400464 8.3:-4678716 None:intergenic
AATCATGCTGTTCTTGCTGT+TGG 0.406771 8.3:+4679494 MS.gene012206:CDS
AACGTTGCTGTTCAAGTCCT+TGG 0.409619 8.3:+4678814 MS.gene012206:CDS
TTCAATAACTTTGGCTGCAA+TGG 0.411469 8.3:+4678682 MS.gene012206:CDS
ATTTAATGTATTCAAAGGCT+TGG 0.415754 8.3:-4678717 None:intergenic
TTGAAGATGGTGTACCATAT+TGG 0.416176 8.3:+4679525 MS.gene012206:CDS
TCCCGTTAGTGTGGCATTTG+AGG 0.421683 8.3:+4679225 MS.gene012206:CDS
ATCATGCTGTTCTTGCTGTT+GGG 0.423797 8.3:+4679495 MS.gene012206:CDS
TCCACGACTCCAATCCTATT+CGG 0.426027 8.3:+4676369 MS.gene012206:CDS
CGTACCATTTAGGCCACAAC+AGG 0.448204 8.3:-4679907 None:intergenic
AATAACTTTGGCTGCAATGG+TGG 0.455761 8.3:+4678685 MS.gene012206:CDS
CAGAAAGATTGGAGGAAAGA+AGG 0.463829 8.3:+4677988 MS.gene012206:intron
AAAACTCATGGGGAGGTGAA+TGG 0.463951 8.3:+4679555 MS.gene012206:CDS
CAGCAGCTAGTGGACTGTGC+TGG 0.465005 8.3:+4678655 MS.gene012206:CDS
ATGTCGGAGACCATCCGAAT+AGG 0.466748 8.3:-4676383 None:intergenic
TCAGCTTACGCACAGGCCTT+CGG 0.468118 8.3:+4678610 MS.gene012206:CDS
GCTGGTGCTTTCAATAACTT+TGG 0.475033 8.3:+4678673 MS.gene012206:CDS
GAAGCTCAATCCGGCGGCGG+CGG 0.484936 8.3:-4676348 None:intergenic
AATTGTTCTGCTACTCTCAA+GGG 0.485400 8.3:+4676740 MS.gene012206:CDS
GTCAGTGAAGTTAAGGATCA+AGG 0.494471 8.3:+4678015 MS.gene012206:CDS
TCTTTCTGAGCAGCAGCTAG+TGG 0.496747 8.3:+4678645 MS.gene012206:CDS
ATTGTATTTAATGTATTCAA+AGG 0.503015 8.3:-4678722 None:intergenic
TTGTTCATCCTATCCTGTTG+TGG 0.503980 8.3:+4679894 MS.gene012206:CDS
GCTCGCTTTGCTAACAGATA+CGG 0.506701 8.3:+4676458 MS.gene012206:CDS
TCTACTAATAAGAAACGTCT+TGG 0.509184 8.3:+4676554 MS.gene012206:CDS
AAGGCCACTGCGGATCATGC+TGG 0.516867 8.3:+4678034 MS.gene012206:CDS
CACCTCAAATGCCACACTAA+CGG 0.517450 8.3:-4679227 None:intergenic
GGAGACCATCCGAATAGGAT+TGG 0.519715 8.3:-4676378 None:intergenic
GACTTCAGATTATACAAGAA+AGG 0.522674 8.3:+4679256 MS.gene012206:CDS
GAACAACATCGGTAATCCTA+TGG 0.528082 8.3:-4676766 None:intergenic
TGTTGCTGACATACCTCGGC+AGG 0.528653 8.3:-4676791 None:intergenic
AAATTGTTCTGCTACTCTCA+AGG 0.532831 8.3:+4676739 MS.gene012206:CDS
GGAGTCGTGGAAGCTCAATC+CGG 0.546963 8.3:-4676357 None:intergenic
CTACTCTCAAGGGGAACCAT+AGG 0.552146 8.3:+4676750 MS.gene012206:CDS
TATTCGGATGGTCTCCGACA+TGG 0.552839 8.3:+4676385 MS.gene012206:CDS
AAACGTCTTGGTTACACTCT+CGG 0.554881 8.3:+4676566 MS.gene012206:CDS
CGATGTTGTTCTTCCTGCCG+AGG 0.557356 8.3:+4676778 MS.gene012206:CDS
ATAACTTTGGCTGCAATGGT+GGG 0.558078 8.3:+4678686 MS.gene012206:CDS
CATTTAGGCCACAACAGGAT+AGG 0.558859 8.3:-4679902 None:intergenic
GTGGAAGCTCAATCCGGCGG+CGG 0.560054 8.3:-4676351 None:intergenic
TCCGAATAGGATTGGAGTCG+TGG 0.561061 8.3:-4676370 None:intergenic
AACTCATGGGGAGGTGAATG+GGG 0.564340 8.3:+4679557 MS.gene012206:CDS
ATTGTATGCAGAAAGATTGG+AGG 0.565149 8.3:+4677980 MS.gene012206:intron
AAGCAGCTTCTTCAGGTCAT+CGG 0.576623 8.3:+4676410 MS.gene012206:CDS
ATGTATTCAAAGGCTTGGGA+TGG 0.579188 8.3:-4678712 None:intergenic
TCTACGCTTCATTTCATCAA+CGG 0.582909 8.3:-4676495 None:intergenic
AAGAGAGATATTCTTTCCGA+AGG 0.583318 8.3:-4678626 None:intergenic
CGTTAGTGTGGCATTTGAGG+TGG 0.585108 8.3:+4679228 MS.gene012206:CDS
CCACGCAGAAGAAAACGATA+AGG 0.585441 8.3:-4676322 None:intergenic
CAATGGTGGCCTTGAGACAG+AGG 0.588490 8.3:+4678741 MS.gene012206:CDS
TTTGAATACATTAAATACAA+TGG 0.591214 8.3:+4678724 MS.gene012206:CDS
TTTGGAGTCAGCTTACGCAC+AGG 0.591422 8.3:+4678603 MS.gene012206:CDS
GATATGCTTCCTCTGTCTCA+AGG 0.591795 8.3:-4678750 None:intergenic
GTTGGGTATGGAATTGAAGA+TGG 0.599047 8.3:+4679512 MS.gene012206:CDS
GAATACATTAAATACAATGG+TGG 0.602840 8.3:+4678727 MS.gene012206:CDS
GAGGAAGCATATCCCTACAC+TGG 0.603850 8.3:+4678760 MS.gene012206:CDS
AACTTGTGGCAACACACCCA+TGG 0.613991 8.3:+4679294 MS.gene012206:CDS
GGAGGTGAATGGGGTGACCA+TGG 0.614058 8.3:+4679566 MS.gene012206:CDS
CGACTCCAATCCTATTCGGA+TGG 0.614891 8.3:+4676373 MS.gene012206:CDS
ATTGTTCTGCTACTCTCAAG+GGG 0.626423 8.3:+4676741 MS.gene012206:CDS
TGGCTCTGTCAATATCACCT+TGG 0.626940 8.3:+4678834 MS.gene012206:CDS
GCTACTTCAAAATGGAAATG+GGG 0.626994 8.3:+4679588 MS.gene012206:CDS
GTCGTGGAAGCTCAATCCGG+CGG 0.638778 8.3:-4676354 None:intergenic
GTTTACACTAGTACAACTTG+TGG 0.641036 8.3:+4679280 MS.gene012206:CDS
GAGTTCAGAAGTCATAGACT+TGG 0.649401 8.3:+4676707 MS.gene012206:CDS
AGCGAGCGAAAGAGACAGCG+TGG 0.659831 8.3:-4676442 None:intergenic
AGGTGATATTGACAGAGCCA+AGG 0.667399 8.3:-4678831 None:intergenic
CTCGGCAGGAAGAACAACAT+CGG 0.700091 8.3:-4676777 None:intergenic
ATGTCCAGCATGATCCGCAG+TGG 0.707970 8.3:-4678038 None:intergenic
GAAATGGGGAAGAATATGTG+CGG 0.730027 8.3:+4679602 MS.gene012206:CDS
GTTAAGGATCAAGGCCACTG+CGG 0.773436 8.3:+4678024 MS.gene012206:CDS
GAGAGTGAAAGATGGCACAG+TGG 0.782503 8.3:+4676294 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAATTAATAGATATCT+TGG + chr8.3:4677032-4677051 MS.gene012206:intron 10.0%
!!! TTTAATTTAACAAATAGTTT+AGG + chr8.3:4679397-4679416 MS.gene012206:intron 10.0%
!!! TTTGTTTTTAATTTTGTTTT+GGG + chr8.3:4679156-4679175 MS.gene012206:intron 10.0%
!!! TTTTGTTTTTAATTTTGTTT+TGG + chr8.3:4679155-4679174 MS.gene012206:intron 10.0%
!! AAAAAGAAAATTAAAGTCAA+AGG - chr8.3:4676619-4676638 None:intergenic 15.0%
!! ATTGTATTTAATGTATTCAA+AGG - chr8.3:4678725-4678744 None:intergenic 15.0%
!! TTTGAATACATTAAATACAA+TGG + chr8.3:4678724-4678743 MS.gene012206:CDS 15.0%
!!! AAATGCATTTTAAATTGTAA+TGG - chr8.3:4677175-4677194 None:intergenic 15.0%
!!! AAATTTTAAAGTATGAGTTT+TGG + chr8.3:4678118-4678137 MS.gene012206:intron 15.0%
!!! AATCATTTTTGTTTAATTTC+AGG + chr8.3:4679862-4679881 MS.gene012206:intron 15.0%
!!! ATTTTGATGATAAATGATTT+TGG + chr8.3:4676653-4676672 MS.gene012206:intron 15.0%
!!! GCTATATTAATTTTTTTTTG+AGG - chr8.3:4676980-4676999 None:intergenic 15.0%
!! ATAGCTTATAGTAGTTTATA+TGG + chr8.3:4677604-4677623 MS.gene012206:intron 20.0%
!! CTGAGTTTATATTATTTAGT+TGG + chr8.3:4678961-4678980 MS.gene012206:intron 20.0%
!! CTTTCATTCCATAAAATTAT+TGG - chr8.3:4678335-4678354 None:intergenic 20.0%
!! TACAAATAAATTAGGACTTA+GGG - chr8.3:4678462-4678481 None:intergenic 20.0%
!! TTAAATTGTTTATTCAAACG+AGG + chr8.3:4677687-4677706 MS.gene012206:intron 20.0%
!! TTACAAATAAATTAGGACTT+AGG - chr8.3:4678463-4678482 None:intergenic 20.0%
!! TTCCATTCCATTAAAATTAT+TGG - chr8.3:4678379-4678398 None:intergenic 20.0%
!!! AAACTGTCCAATAATTTTAA+TGG + chr8.3:4678369-4678388 MS.gene012206:intron 20.0%
!!! AATTGTGCGTTTTTTTTATT+AGG + chr8.3:4677367-4677386 MS.gene012206:intron 20.0%
!!! ATTGCTAATTTTAATTTCGA+TGG + chr8.3:4677285-4677304 MS.gene012206:intron 20.0%
!!! ATTGTGCGTTTTTTTTATTA+GGG + chr8.3:4677368-4677387 MS.gene012206:intron 20.0%
!!! TAAACTGTCCAATAATTTTA+TGG + chr8.3:4678324-4678343 MS.gene012206:intron 20.0%
!!! TAAGTTATTTCTATAACTGA+AGG - chr8.3:4677651-4677670 None:intergenic 20.0%
!!! TACTATAAGCTATTTTCATA+AGG - chr8.3:4677597-4677616 None:intergenic 20.0%
!!! TGTTATTCCATTTTCTTATT+GGG + chr8.3:4677786-4677805 MS.gene012206:intron 20.0%
! AATAAGTAAATTGCATTCTG+AGG + chr8.3:4677927-4677946 MS.gene012206:intron 25.0%
! AATCAAACATATGATTACCA+AGG - chr8.3:4678854-4678873 None:intergenic 25.0%
! ACAAATAAATTAGGACTTAG+GGG - chr8.3:4678461-4678480 None:intergenic 25.0%
! ACTATGTTAATTTCTTGTGT+TGG + chr8.3:4678927-4678946 MS.gene012206:intron 25.0%
! ATTCAAATTTCGTTAACTTC+TGG - chr8.3:4679457-4679476 None:intergenic 25.0%
! ATTTAATGTATTCAAAGGCT+TGG - chr8.3:4678720-4678739 None:intergenic 25.0%
! CAAAAATGATTAGCAAAAAC+AGG - chr8.3:4679853-4679872 None:intergenic 25.0%
! CAATAAGAAAATGGAATAAC+AGG - chr8.3:4677787-4677806 None:intergenic 25.0%
! CACTTGGTTACAAATAAATT+AGG - chr8.3:4678470-4678489 None:intergenic 25.0%
! GAAATTAATGCTAACATACA+CGG - chr8.3:4677820-4677839 None:intergenic 25.0%
! GAATACATTAAATACAATGG+TGG + chr8.3:4678727-4678746 MS.gene012206:CDS 25.0%
! TAACGAAATTTGAATTTGTC+TGG + chr8.3:4679462-4679481 MS.gene012206:intron 25.0%
! TAGTTAACAAATACATCATG+CGG - chr8.3:4678886-4678905 None:intergenic 25.0%
! TCACAAACAAATATGAACAA+CGG - chr8.3:4677907-4677926 None:intergenic 25.0%
! TGACAGTCTAATATTAATTG+TGG - chr8.3:4677877-4677896 None:intergenic 25.0%
! TTAACAAAAGAGTTAAGATC+CGG - chr8.3:4679636-4679655 None:intergenic 25.0%
! TTCAAATTTCGTTAACTTCT+GGG - chr8.3:4679456-4679475 None:intergenic 25.0%
! TTCTACATTCATAGATAACT+CGG - chr8.3:4677198-4677217 None:intergenic 25.0%
! TTGAATTAAACACTAGATTG+AGG - chr8.3:4679350-4679369 None:intergenic 25.0%
! TTTAATGTATTCAAAGGCTT+GGG - chr8.3:4678719-4678738 None:intergenic 25.0%
! TTTCTGCATACAATAACAAA+AGG - chr8.3:4677974-4677993 None:intergenic 25.0%
!! CTGTTATTCCATTTTCTTAT+TGG + chr8.3:4677785-4677804 MS.gene012206:intron 25.0%
!! GTAACTGAGACTTTTATATT+TGG - chr8.3:4677136-4677155 None:intergenic 25.0%
!! TAATCATTTAATCTGAAGTG+CGG - chr8.3:4677737-4677756 None:intergenic 25.0%
!! TCTTGATGATTAAATAACTG+TGG + chr8.3:4679691-4679710 MS.gene012206:intron 25.0%
!! TTTTCAGATGTAAATTTGCA+GGG - chr8.3:4678796-4678815 None:intergenic 25.0%
!!! AATAGTTTAGGTTGAATCTA+TGG + chr8.3:4679409-4679428 MS.gene012206:intron 25.0%
!!! ATATAGCACTCAAAAGTATT+AGG + chr8.3:4676993-4677012 MS.gene012206:intron 25.0%
!!! GTCCAATAATTTTAATGGAA+TGG + chr8.3:4678374-4678393 MS.gene012206:intron 25.0%
!!! TTAATTTTGTTTTGGGTGTA+GGG + chr8.3:4679163-4679182 MS.gene012206:intron 25.0%
!!! TTGTGCGTTTTTTTTATTAG+GGG + chr8.3:4677369-4677388 MS.gene012206:intron 25.0%
!!! TTTAATTTTGTTTTGGGTGT+AGG + chr8.3:4679162-4679181 MS.gene012206:intron 25.0%
AAAGTGCAACTTCATACAAA+GGG - chr8.3:4678537-4678556 None:intergenic 30.0%
AAATTCAGTTGAAGAATGAC+AGG - chr8.3:4677842-4677861 None:intergenic 30.0%
AACTATAGCATAGACACTTA+TGG - chr8.3:4677497-4677516 None:intergenic 30.0%
AATTAAACACTAGATTGAGG+AGG - chr8.3:4679347-4679366 None:intergenic 30.0%
ATCTAATATAGATGAAGTCG+AGG - chr8.3:4679128-4679147 None:intergenic 30.0%
CAGTTACATACACAAATACT+AGG + chr8.3:4677149-4677168 MS.gene012206:intron 30.0%
GACTTCAGATTATACAAGAA+AGG + chr8.3:4679256-4679275 MS.gene012206:CDS 30.0%
GTTATTGTATGCAGAAAGAT+TGG + chr8.3:4677977-4677996 MS.gene012206:intron 30.0%
TAAAGTGCAACTTCATACAA+AGG - chr8.3:4678538-4678557 None:intergenic 30.0%
TAACAAAAGAGTTAAGATCC+GGG - chr8.3:4679635-4679654 None:intergenic 30.0%
TCAAATTTCGTTAACTTCTG+GGG - chr8.3:4679455-4679474 None:intergenic 30.0%
TCCTACATAACACAATCTAA+AGG - chr8.3:4679723-4679742 None:intergenic 30.0%
TCTACTAATAAGAAACGTCT+TGG + chr8.3:4676554-4676573 MS.gene012206:CDS 30.0%
TGAAAATAACACTCGTGTAA+TGG - chr8.3:4677318-4677337 None:intergenic 30.0%
TGATTAAATAACTGTGGCAA+AGG + chr8.3:4679697-4679716 MS.gene012206:intron 30.0%
TGATTGCTCAAAGAAAAAGT+TGG - chr8.3:4678189-4678208 None:intergenic 30.0%
TTCAAATTCACACAAATGCT+CGG - chr8.3:4677113-4677132 None:intergenic 30.0%
TTGGCTCATTAAAAACTCAT+GGG + chr8.3:4679544-4679563 MS.gene012206:CDS 30.0%
TTTGCGTCTTTGTGAAAATA+TGG + chr8.3:4679766-4679785 MS.gene012206:intron 30.0%
! AAAGTTGGCTTATAAACCAA+AGG - chr8.3:4678174-4678193 None:intergenic 30.0%
! AAGGCATTAATTTGAGAAAG+TGG - chr8.3:4678504-4678523 None:intergenic 30.0%
! ACTAAAGACATGCTTGTTAA+TGG - chr8.3:4677257-4677276 None:intergenic 30.0%
! ATATTTTCACAAAGACGCAA+AGG - chr8.3:4679767-4679786 None:intergenic 30.0%
! ATTGGCTCATTAAAAACTCA+TGG + chr8.3:4679543-4679562 MS.gene012206:CDS 30.0%
! GAGTTTTTAATGAGCCAATA+TGG - chr8.3:4679542-4679561 None:intergenic 30.0%
! GTTTTCAGATGTAAATTTGC+AGG - chr8.3:4678797-4678816 None:intergenic 30.0%
! TGCTATTTAGGATGCTATTT+AGG - chr8.3:4677713-4677732 None:intergenic 30.0%
!!! ATTAGGGGCTTATTTTTACT+AGG + chr8.3:4677384-4677403 MS.gene012206:intron 30.0%
!!! ATTTTTTTTTGAGGCTCCTA+AGG - chr8.3:4676971-4676990 None:intergenic 30.0%
AAATTGTTCTGCTACTCTCA+AGG + chr8.3:4676739-4676758 MS.gene012206:CDS 35.0%
AAGAGAGATATTCTTTCCGA+AGG - chr8.3:4678629-4678648 None:intergenic 35.0%
AATTGTTCTGCTACTCTCAA+GGG + chr8.3:4676740-4676759 MS.gene012206:CDS 35.0%
AGGTATAGTCAGTGAAGTTA+AGG + chr8.3:4678008-4678027 MS.gene012206:CDS 35.0%
ATAGAATGCACTTGAGTCAT+CGG + chr8.3:4677072-4677091 MS.gene012206:intron 35.0%
ATCAAGATCCAAGACAGAAA+AGG - chr8.3:4679678-4679697 None:intergenic 35.0%
ATTCACATTATGTGCTCGTA+TGG + chr8.3:4679042-4679061 MS.gene012206:intron 35.0%
ATTGTATGCAGAAAGATTGG+AGG + chr8.3:4677980-4677999 MS.gene012206:intron 35.0%
CAAGACAGAAAAGGACAATT+GGG - chr8.3:4679669-4679688 None:intergenic 35.0%
CACTTAAGTAGTAATCAAGC+AGG + chr8.3:4676897-4676916 MS.gene012206:intron 35.0%
GAAATTTGAATTTGTCTGGC+AGG + chr8.3:4679466-4679485 MS.gene012206:intron 35.0%
GCCTTTAGATTGTGTTATGT+AGG + chr8.3:4679719-4679738 MS.gene012206:intron 35.0%
GCTACTTCAAAATGGAAATG+GGG + chr8.3:4679588-4679607 MS.gene012206:CDS 35.0%
GGCTACTTCAAAATGGAAAT+GGG + chr8.3:4679587-4679606 MS.gene012206:CDS 35.0%
GGCTTATAAACCAAAGGATA+GGG - chr8.3:4678168-4678187 None:intergenic 35.0%
GTTTACACTAGTACAACTTG+TGG + chr8.3:4679280-4679299 MS.gene012206:CDS 35.0%
TACAAAGGGTTGAATCTCAA+AGG - chr8.3:4678523-4678542 None:intergenic 35.0%
TATAGCATAGACACTTATGG+TGG - chr8.3:4677494-4677513 None:intergenic 35.0%
TCAAATTCACACAAATGCTC+GGG - chr8.3:4677112-4677131 None:intergenic 35.0%
TCTACGCTTCATTTCATCAA+CGG - chr8.3:4676498-4676517 None:intergenic 35.0%
TGGCTACTTCAAAATGGAAA+TGG + chr8.3:4679586-4679605 MS.gene012206:CDS 35.0%
TGGCTCATTAAAAACTCATG+GGG + chr8.3:4679545-4679564 MS.gene012206:CDS 35.0%
TGGCTTATAAACCAAAGGAT+AGG - chr8.3:4678169-4678188 None:intergenic 35.0%
TGTCGTATTATGAGCTAGTT+TGG + chr8.3:4676842-4676861 MS.gene012206:intron 35.0%
TTCAATAACTTTGGCTGCAA+TGG + chr8.3:4678682-4678701 MS.gene012206:CDS 35.0%
TTGAAGATGGTGTACCATAT+TGG + chr8.3:4679525-4679544 MS.gene012206:CDS 35.0%
! AGTGGTGAAATTTTTGCACT+TGG - chr8.3:4678486-4678505 None:intergenic 35.0%
! CAGTGTCATTGTTACAGATA+TGG - chr8.3:4678561-4678580 None:intergenic 35.0%
! GAGAGTTTTTGCAAGAACTT+AGG + chr8.3:4677520-4677539 MS.gene012206:intron 35.0%
! TTCCATTTTCTTATTGGGTC+TGG + chr8.3:4677791-4677810 MS.gene012206:intron 35.0%
!! AATGAGCATTGTGCTCTTTT+TGG - chr8.3:4678999-4679018 None:intergenic 35.0%
!! AGATTTTGCTGATTGGACTT+GGG + chr8.3:4676682-4676701 MS.gene012206:intron 35.0%
!!! ACTTAAGTGTTGTTTTCGTC+AGG - chr8.3:4676886-4676905 None:intergenic 35.0%
!!! TTTCCATTTTGAAGTAGCCA+TGG - chr8.3:4679586-4679605 None:intergenic 35.0%
AAACGTCTTGGTTACACTCT+CGG + chr8.3:4676566-4676585 MS.gene012206:CDS 40.0%
AATAACTTTGGCTGCAATGG+TGG + chr8.3:4678685-4678704 MS.gene012206:CDS 40.0%
AGGGTTTCAAGAGGTTAAGA+TGG - chr8.3:4678149-4678168 None:intergenic 40.0%
ATAACTTTGGCTGCAATGGT+GGG + chr8.3:4678686-4678705 MS.gene012206:CDS 40.0%
ATGTATTCAAAGGCTTGGGA+TGG - chr8.3:4678715-4678734 None:intergenic 40.0%
ATTGTTCTGCTACTCTCAAG+GGG + chr8.3:4676741-4676760 MS.gene012206:CDS 40.0%
CACCAACACACTTGATTACA+TGG - chr8.3:4677440-4677459 None:intergenic 40.0%
CACCAGACCCAATAAGAAAA+TGG - chr8.3:4677796-4677815 None:intergenic 40.0%
CAGAAAGATTGGAGGAAAGA+AGG + chr8.3:4677988-4678007 MS.gene012206:intron 40.0%
CCAAGACAGAAAAGGACAAT+TGG - chr8.3:4679670-4679689 None:intergenic 40.0%
CTCATTAAAAACTCATGGGG+AGG + chr8.3:4679548-4679567 MS.gene012206:CDS 40.0%
GAAATGGGGAAGAATATGTG+CGG + chr8.3:4679602-4679621 MS.gene012206:CDS 40.0%
GAACAACATCGGTAATCCTA+TGG - chr8.3:4676769-4676788 None:intergenic 40.0%
GAGTTCAGAAGTCATAGACT+TGG + chr8.3:4676707-4676726 MS.gene012206:CDS 40.0%
GCTGGTGCTTTCAATAACTT+TGG + chr8.3:4678673-4678692 MS.gene012206:CDS 40.0%
GTCAGTGAAGTTAAGGATCA+AGG + chr8.3:4678015-4678034 MS.gene012206:CDS 40.0%
GTTGGGTATGGAATTGAAGA+TGG + chr8.3:4679512-4679531 MS.gene012206:CDS 40.0%
TATCCCTACACTGGACAAAA+TGG + chr8.3:4678769-4678788 MS.gene012206:CDS 40.0%
TATTGCAGAACACTCACCAT+GGG - chr8.3:4679313-4679332 None:intergenic 40.0%
TGACCATGGCTACTTCAAAA+TGG + chr8.3:4679580-4679599 MS.gene012206:CDS 40.0%
TTGTTCATCCTATCCTGTTG+TGG + chr8.3:4679894-4679913 MS.gene012206:CDS 40.0%
! AACTAACAACAGCTCTAGCA+AGG - chr8.3:4679792-4679811 None:intergenic 40.0%
! AATCATGCTGTTCTTGCTGT+TGG + chr8.3:4679494-4679513 MS.gene012206:CDS 40.0%
! CCAATTGTCCTTTTCTGTCT+TGG + chr8.3:4679667-4679686 MS.gene012206:intron 40.0%
! GAGTTGCAGATTTTGCTGAT+TGG + chr8.3:4676675-4676694 MS.gene012206:intron 40.0%
!! ATCATGCTGTTCTTGCTGTT+GGG + chr8.3:4679495-4679514 MS.gene012206:CDS 40.0%
!! CAGATTTTGCTGATTGGACT+TGG + chr8.3:4676681-4676700 MS.gene012206:intron 40.0%
!!! AAGAAGCTGCTTTTCCATGT+CGG - chr8.3:4676402-4676421 None:intergenic 40.0%
AAAACTCATGGGGAGGTGAA+TGG + chr8.3:4679555-4679574 MS.gene012206:CDS 45.0%
AAACTCATGGGGAGGTGAAT+GGG + chr8.3:4679556-4679575 MS.gene012206:CDS 45.0%
AAGCAGCTTCTTCAGGTCAT+CGG + chr8.3:4676410-4676429 MS.gene012206:CDS 45.0%
AAGTAGTAATCAAGCAGGCC+CGG + chr8.3:4676902-4676921 MS.gene012206:intron 45.0%
AATATGTGCGGTAAGGATCC+CGG + chr8.3:4679614-4679633 MS.gene012206:intron 45.0%
ACCTCAAATGCCACACTAAC+GGG - chr8.3:4679229-4679248 None:intergenic 45.0%
AGGTGATATTGACAGAGCCA+AGG - chr8.3:4678834-4678853 None:intergenic 45.0%
CACCTCAAATGCCACACTAA+CGG - chr8.3:4679230-4679249 None:intergenic 45.0%
CAGAAAAGGACAATTGGGTG+AGG - chr8.3:4679664-4679683 None:intergenic 45.0%
CAGTTGTTGCTGACATACCT+CGG - chr8.3:4676798-4676817 None:intergenic 45.0%
CATGGAAAAGCAGCTTCTTC+AGG + chr8.3:4676403-4676422 MS.gene012206:CDS 45.0%
CCAAAGGATAGGGTTTCAAG+AGG - chr8.3:4678158-4678177 None:intergenic 45.0%
CCACGCAGAAGAAAACGATA+AGG - chr8.3:4676325-4676344 None:intergenic 45.0%
CCTCTTGAAACCCTATCCTT+TGG + chr8.3:4678155-4678174 MS.gene012206:intron 45.0%
CTATTGCAGAACACTCACCA+TGG - chr8.3:4679314-4679333 None:intergenic 45.0%
GATATGCTTCCTCTGTCTCA+AGG - chr8.3:4678753-4678772 None:intergenic 45.0%
GCTCGCTTTGCTAACAGATA+CGG + chr8.3:4676458-4676477 MS.gene012206:CDS 45.0%
GGCCATGTAATCAAGTGTGT+TGG + chr8.3:4677435-4677454 MS.gene012206:intron 45.0%
GTAGTTGCTCTGTAGAGACA+TGG + chr8.3:4679083-4679102 MS.gene012206:intron 45.0%
GTCTCTACAGAGCAACTACA+AGG - chr8.3:4679082-4679101 None:intergenic 45.0%
TCCACGACTCCAATCCTATT+CGG + chr8.3:4676369-4676388 MS.gene012206:CDS 45.0%
TCCCTATAAAACTGGAGGCT+CGG - chr8.3:4677414-4677433 None:intergenic 45.0%
! AACGTTGCTGTTCAAGTCCT+TGG + chr8.3:4678814-4678833 MS.gene012206:CDS 45.0%
! CCTTATCGTTTTCTTCTGCG+TGG + chr8.3:4676322-4676341 MS.gene012206:CDS 45.0%
! CTGAAGTGCGGATGCTATTT+AGG - chr8.3:4677725-4677744 None:intergenic 45.0%
! CTGACTGTGAGGAGCTATTT+TGG + chr8.3:4678073-4678092 MS.gene012206:intron 45.0%
! GCATAGACACTTATGGTGGA+AGG - chr8.3:4677490-4677509 None:intergenic 45.0%
! GGACCATTTTGTCCAGTGTA+GGG - chr8.3:4678775-4678794 None:intergenic 45.0%
! TCTGGGGAAGCATATCATGA+TGG - chr8.3:4679439-4679458 None:intergenic 45.0%
! TCTGGTGTCTAAAACCGAGA+TGG - chr8.3:4677463-4677482 None:intergenic 45.0%
! TGGCTCTGTCAATATCACCT+TGG + chr8.3:4678834-4678853 MS.gene012206:CDS 45.0%
!! AGCCTCCAGTTTTATAGGGA+CGG + chr8.3:4677414-4677433 MS.gene012206:intron 45.0%
!! TTTTGCTGATTGGACTTGGG+AGG + chr8.3:4676685-4676704 MS.gene012206:CDS 45.0%
AACTCATGGGGAGGTGAATG+GGG + chr8.3:4679557-4679576 MS.gene012206:CDS 50.0%
AACTTGTGGCAACACACCCA+TGG + chr8.3:4679294-4679313 MS.gene012206:CDS 50.0%
ACCTTGCATATGCCAATGGC+CGG - chr8.3:4676924-4676943 None:intergenic 50.0%
ACTGTCATCTGCAGCACAAC+TGG + chr8.3:4678577-4678596 MS.gene012206:intron 50.0%
ATGTCGGAGACCATCCGAAT+AGG - chr8.3:4676386-4676405 None:intergenic 50.0%
CACTTGAGTCATCGGTCTTG+AGG + chr8.3:4677080-4677099 MS.gene012206:intron 50.0%
CATGGCCGTCCCTATAAAAC+TGG - chr8.3:4677422-4677441 None:intergenic 50.0%
CGACTCCAATCCTATTCGGA+TGG + chr8.3:4676373-4676392 MS.gene012206:CDS 50.0%
CGTTAGTGTGGCATTTGAGG+TGG + chr8.3:4679228-4679247 MS.gene012206:CDS 50.0%
CTACTCTCAAGGGGAACCAT+AGG + chr8.3:4676750-4676769 MS.gene012206:CDS 50.0%
CTCGGCAGGAAGAACAACAT+CGG - chr8.3:4676780-4676799 None:intergenic 50.0%
GCTCACCTTGCATATGCCAA+TGG - chr8.3:4676928-4676947 None:intergenic 50.0%
GGAGACCATCCGAATAGGAT+TGG - chr8.3:4676381-4676400 None:intergenic 50.0%
GGCATATGCAAGGTGAGCTA+TGG + chr8.3:4676930-4676949 MS.gene012206:intron 50.0%
GGGGAAGAATATGTGCGGTA+AGG + chr8.3:4679607-4679626 MS.gene012206:intron 50.0%
GTTAAGGATCAAGGCCACTG+CGG + chr8.3:4678024-4678043 MS.gene012206:CDS 50.0%
TATTCGGATGGTCTCCGACA+TGG + chr8.3:4676385-4676404 MS.gene012206:CDS 50.0%
TCCCGTTAGTGTGGCATTTG+AGG + chr8.3:4679225-4679244 MS.gene012206:CDS 50.0%
TCCGAATAGGATTGGAGTCG+TGG - chr8.3:4676373-4676392 None:intergenic 50.0%
TCTTTCTGAGCAGCAGCTAG+TGG + chr8.3:4678645-4678664 MS.gene012206:CDS 50.0%
! CAGGTTGCTTTCTGACTGTG+AGG + chr8.3:4678062-4678081 MS.gene012206:intron 50.0%
! CTTATGGTGGAAGGTGTGTC+TGG - chr8.3:4677481-4677500 None:intergenic 50.0%
! GAGGAAGCATATCCCTACAC+TGG + chr8.3:4678760-4678779 MS.gene012206:CDS 50.0%
! GGGACCATTTTGTCCAGTGT+AGG - chr8.3:4678776-4678795 None:intergenic 50.0%
! TTTGGAGTCAGCTTACGCAC+AGG + chr8.3:4678603-4678622 MS.gene012206:CDS 50.0%
! TTTTGCTCGTCCCGTTAGTG+TGG + chr8.3:4679216-4679235 MS.gene012206:CDS 50.0%
!! AGCCGAGCCTCCAGTTTTAT+AGG + chr8.3:4677409-4677428 MS.gene012206:intron 50.0%
!! CAAGTGTGTTGGTGCCATCT+CGG + chr8.3:4677446-4677465 MS.gene012206:intron 50.0%
!! GCCGAGCCTCCAGTTTTATA+GGG + chr8.3:4677410-4677429 MS.gene012206:intron 50.0%
!! GCTGTTCTTGCTGTTGGGTA+TGG + chr8.3:4679500-4679519 MS.gene012206:CDS 50.0%
ATGTCCAGCATGATCCGCAG+TGG - chr8.3:4678041-4678060 None:intergenic 55.0%
CCTTGCATATGCCAATGGCC+GGG - chr8.3:4676923-4676942 None:intergenic 55.0%
CGATGTTGTTCTTCCTGCCG+AGG + chr8.3:4676778-4676797 MS.gene012206:CDS 55.0%
CTGCAGCACAACTGGAGCTT+TGG + chr8.3:4678585-4678604 MS.gene012206:intron 55.0%
GCGGATCATGCTGGACATTC+AGG + chr8.3:4678043-4678062 MS.gene012206:CDS 55.0%
GGAGTCGTGGAAGCTCAATC+CGG - chr8.3:4676360-4676379 None:intergenic 55.0%
GGCCGTCCCTATAAAACTGG+AGG - chr8.3:4677419-4677438 None:intergenic 55.0%
TCAGCTTACGCACAGGCCTT+CGG + chr8.3:4678610-4678629 MS.gene012206:CDS 55.0%
TGCAAGGTGAGCTATGGTGC+CGG + chr8.3:4676936-4676955 MS.gene012206:intron 55.0%
TGTTGCTGACATACCTCGGC+AGG - chr8.3:4676794-4676813 None:intergenic 55.0%
! CAATGGTGGCCTTGAGACAG+AGG + chr8.3:4678741-4678760 MS.gene012206:CDS 55.0%
!!! GTTTTGGGTGTAGGGTGCTG+AGG + chr8.3:4679171-4679190 MS.gene012206:intron 55.0%
AAGGCCACTGCGGATCATGC+TGG + chr8.3:4678034-4678053 MS.gene012206:CDS 60.0%
AATCAAGCAGGCCCGGCCAT+TGG + chr8.3:4676909-4676928 MS.gene012206:intron 60.0%
AGCGAGCGAAAGAGACAGCG+TGG - chr8.3:4676445-4676464 None:intergenic 60.0%
CCCGGCCATTGGCATATGCA+AGG + chr8.3:4676920-4676939 MS.gene012206:intron 60.0%
GCAAGGTGAGCTATGGTGCC+GGG + chr8.3:4676937-4676956 MS.gene012206:intron 60.0%
GGAGGTGAATGGGGTGACCA+TGG + chr8.3:4679566-4679585 MS.gene012206:CDS 60.0%
GTCGTGGAAGCTCAATCCGG+CGG - chr8.3:4676357-4676376 None:intergenic 60.0%
TTGAGGCTCCTAAGGCTGCG+AGG - chr8.3:4676963-4676982 None:intergenic 60.0%
!! CAGCAGCTAGTGGACTGTGC+TGG + chr8.3:4678655-4678674 MS.gene012206:CDS 60.0%
GTGGAAGCTCAATCCGGCGG+CGG - chr8.3:4676354-4676373 None:intergenic 65.0%
GAAGCTCAATCCGGCGGCGG+CGG - chr8.3:4676351-4676370 None:intergenic 70.0%
GCTCCTAAGGCTGCGAGGCC+CGG - chr8.3:4676958-4676977 None:intergenic 70.0%
GTGCCGGGCCTCGCAGCCTT+AGG + chr8.3:4676952-4676971 MS.gene012206:intron 75.0%
! GCTCAATCCGGCGGCGGCGG+TGG - chr8.3:4676348-4676367 None:intergenic 80.0%
! TGCGTGGCCACCGCCGCCGC+CGG + chr8.3:4676338-4676357 MS.gene012206:CDS 85.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 4676305 4679921 4676305 ID=MS.gene012206
chr8.3 mRNA 4676305 4679921 4676305 ID=MS.gene012206.t1;Parent=MS.gene012206
chr8.3 exon 4676305 4676596 4676305 ID=MS.gene012206.t1.exon1;Parent=MS.gene012206.t1
chr8.3 CDS 4676305 4676596 4676305 ID=cds.MS.gene012206.t1;Parent=MS.gene012206.t1
chr8.3 exon 4676684 4676799 4676684 ID=MS.gene012206.t1.exon2;Parent=MS.gene012206.t1
chr8.3 CDS 4676684 4676799 4676684 ID=cds.MS.gene012206.t1;Parent=MS.gene012206.t1
chr8.3 exon 4677991 4678064 4677991 ID=MS.gene012206.t1.exon3;Parent=MS.gene012206.t1
chr8.3 CDS 4677991 4678064 4677991 ID=cds.MS.gene012206.t1;Parent=MS.gene012206.t1
chr8.3 exon 4678591 4678855 4678591 ID=MS.gene012206.t1.exon4;Parent=MS.gene012206.t1
chr8.3 CDS 4678591 4678855 4678591 ID=cds.MS.gene012206.t1;Parent=MS.gene012206.t1
chr8.3 exon 4679184 4679315 4679184 ID=MS.gene012206.t1.exon5;Parent=MS.gene012206.t1
chr8.3 CDS 4679184 4679315 4679184 ID=cds.MS.gene012206.t1;Parent=MS.gene012206.t1
chr8.3 exon 4679488 4679623 4679488 ID=MS.gene012206.t1.exon6;Parent=MS.gene012206.t1
chr8.3 CDS 4679488 4679623 4679488 ID=cds.MS.gene012206.t1;Parent=MS.gene012206.t1
chr8.3 exon 4679884 4679921 4679884 ID=MS.gene012206.t1.exon7;Parent=MS.gene012206.t1
chr8.3 CDS 4679884 4679921 4679884 ID=cds.MS.gene012206.t1;Parent=MS.gene012206.t1
Gene Sequence

>MS.gene012206

ATGGCACAGTGGACGCTCCTTATCGTTTTCTTCTGCGTGGCCACCGCCGCCGCCGGATTGAGCTTCCACGACTCCAATCCTATTCGGATGGTCTCCGACATGGAAAAGCAGCTTCTTCAGGTCATCGGAGAATCTCGCCACGCTGTCTCTTTCGCTCGCTTTGCTAACAGATACGGCAAAAGATACGATACCGTTGATGAAATGAAGCGTAGATTTAAGATCTTCTCTGAGAATCTTCAACTTATCAAATCTACTAATAAGAAACGTCTTGGTTACACTCTCGGTGTTAATCGTATGTGCTTTTGAATTTACCTTTGACTTTAATTTTCTTTTTCATTTCTTAGTCAAATTTTGATGATAAATGATTTTGGAGTTGCAGATTTTGCTGATTGGACTTGGGAGGAGTTCAGAAGTCATAGACTTGGTGCTGCTCAAAATTGTTCTGCTACTCTCAAGGGGAACCATAGGATTACCGATGTTGTTCTTCCTGCCGAGGTATGTCAGCAACAACTGTCAACTTAAATCAATATAAATTGTTGTCGTATTATGAGCTAGTTTGGATTGATTTACTTAGACTTCCTGACGAAAACAACACTTAAGTAGTAATCAAGCAGGCCCGGCCATTGGCATATGCAAGGTGAGCTATGGTGCCGGGCCTCGCAGCCTTAGGAGCCTCAAAAAAAAATTAATATAGCACTCAAAAGTATTAGGTATATAAAATAAAATATAAAAAATTAATAGATATCTTGGAATAGTTTAGTAGTAAAATAGAATGCACTTGAGTCATCGGTCTTGAGGTTCAATCCCGAGCATTTGTGTGAATTTGAACCAAATATAAAAGTCTCAGTTACATACACAAATACTAGGCCATTACAATTTAAAATGCATTTCCGAGTTATCTATGAATGTAGAAAACTACTATATATCTTGAATTTTTTGTCATCTATTTCCATTAACAAGCATGTCTTTAGTAAATAATAATTGCTAATTTTAATTTCGATGGCTAATAACCATTACACGAGTGTTATTTTCAATTTAAATAGAAGATTAATCTTTTAAAAAAATTGTGCGTTTTTTTTATTAGGGGCTTATTTTTACTAGGAGAGCCGAGCCTCCAGTTTTATAGGGACGGCCATGTAATCAAGTGTGTTGGTGCCATCTCGGTTTTAGACACCAGACACACCTTCCACCATAAGTGTCTATGCTATAGTTTGTGAGAGTTTTTGCAAGAACTTAGGAAAACAACTATTGACATGTTCATAAACTGTTTTCATTCGCTCTCAAAAATTCCTTATGAAAATAGCTTATAGTAGTTTATATGGAAACAATTTAACTTTATTTTACCTTCAGTTATAGAAATAACTTATGTTTTAAGCTGTAAATTAAATTGTTTATTCAAACGAGGCCTAAATAGCATCCTAAATAGCATCCGCACTTCAGATTAAATGATTACGAGTGTTTGACACGTGTTTACATTCTCCTGTTATTCCATTTTCTTATTGGGTCTGGTGTCCGTGTATGTTAGCATTAATTTCCTGTCATTCTTCAACTGAATTTTTATATTTCTTTCCACAATTAATATTAGACTGTCACTAAGAGCCGTTGTTCATATTTGTTTGTGAAATAAGTAAATTGCATTCTGAGGAGCTTTGTATGAATCTGATTTCCTTTTGTTATTGTATGCAGAAAGATTGGAGGAAAGAAGGTATAGTCAGTGAAGTTAAGGATCAAGGCCACTGCGGATCATGCTGGACATTCAGGTTGCTTTCTGACTGTGAGGAGCTATTTTGGAATGAATAAAACATCTATTTGAAAATTTTAAAGTATGAGTTTTGGAGTTGCCATCTTAACCTCTTGAAACCCTATCCTTTGGTTTATAAGCCAACTTTTTCTTTGAGCAATCATATAAGCAAACTCAACATTTTTCGTTCTTTGATTAAGTGCTTTTTTACTTTTAACAACTCTTCACTTTAAGATTTGACTTTTTTGTATTTAATGTCGTCTCAATTGTAGTCTTTCTAAACTGTCCAATAATTTTATGGAATGAAAGTTTGCAGTCTTTCTAAACTGTCCAATAATTTTAATGGAATGGAAGTAATAACAACAAGTATGTGTGTATCACTATCTAAAATTAGTAAACACACAAAGTCTTACCCCTAAGTCCTAATTTATTTGTAACCAAGTGCAAAAATTTCACCACTTTCTCAAATTAATGCCTTTGAGATTCAACCCTTTGTATGAAGTTGCACTTTACCATATCTGTAACAATGACACTGTCATCTGCAGCACAACTGGAGCTTTGGAGTCAGCTTACGCACAGGCCTTCGGAAAGAATATCTCTCTTTCTGAGCAGCAGCTAGTGGACTGTGCTGGTGCTTTCAATAACTTTGGCTGCAATGGTGGGCTGCCATCCCAAGCCTTTGAATACATTAAATACAATGGTGGCCTTGAGACAGAGGAAGCATATCCCTACACTGGACAAAATGGTCCCTGCAAATTTACATCTGAAAACGTTGCTGTTCAAGTCCTTGGCTCTGTCAATATCACCTTGGTAATCATATGTTTGATTGTTAATTTACCGCATGATGTATTTGTTAACTAACTCTACTCTAGCTAGCGATGACTATGTTAATTTCTTGTGTTGGTTAAGCTATTGCTGAGTTTATATTATTTAGTTGGTTGAAAGCGATTCCAAAAAGAGCACAATGCTCATTTACAGATTCTCTCTGCTTTCTCTATTCACATTATGTGCTCGTATGGATATTGTAATGTCTCCTTGTAGTTGCTCTGTAGAGACATGGCAGAATCAGATCACTCAAACCTCGACTTCATCTATATTAGATTTTCTAATTTTGTTTTTAATTTTGTTTTGGGTGTAGGGTGCTGAGGATGAATTGAAACATGCAGTTGCTTTTGCTCGTCCCGTTAGTGTGGCATTTGAGGTGGTTGATGACTTCAGATTATACAAGAAAGGAGTTTACACTAGTACAACTTGTGGCAACACACCCATGGTGAGTGTTCTGCAATAGCAAGATTAATCCTCCTCAATCTAGTGTTTAATTCAATTTTTAGAACAAAATGCTTAGCACAAGTTTAATTTAACAAATAGTTTAGGTTGAATCTATGGAATTCCATCATGATATGCTTCCCCAGAAGTTAACGAAATTTGAATTTGTCTGGCAGGATGTGAATCATGCTGTTCTTGCTGTTGGGTATGGAATTGAAGATGGTGTACCATATTGGCTCATTAAAAACTCATGGGGAGGTGAATGGGGTGACCATGGCTACTTCAAAATGGAAATGGGGAAGAATATGTGCGGTAAGGATCCCGGATCTTAACTCTTTTGTTAAAGTGACCTCACCCAATTGTCCTTTTCTGTCTTGGATCTTGATGATTAAATAACTGTGGCAAAGGCCTTTAGATTGTGTTATGTAGGATCAATTATACAAATTTCAAATCCTTTGCGTCTTTGTGAAAATATGGCCTTGCTAGAGCTGTTGTTAGTTCTGAATATATAGAGCTGAAAACAATCATTTTGCACTTACCTGTTTTTGCTAATCATTTTTGTTTAATTTCAGGTGTTGCAACTTGTTCATCCTATCCTGTTGTGGCCTAA
Protein sequence

>MS.gene012206.t1

MAQWTLLIVFFCVATAAAGLSFHDSNPIRMVSDMEKQLLQVIGESRHAVSFARFANRYGKRYDTVDEMKRRFKIFSENLQLIKSTNKKRLGYTLGVNHFADWTWEEFRSHRLGAAQNCSATLKGNHRITDVVLPAEKDWRKEGIVSEVKDQGHCGSCWTFSTTGALESAYAQAFGKNISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKYNGGLETEEAYPYTGQNGPCKFTSENVAVQVLGSVNITLGAEDELKHAVAFARPVSVAFEVVDDFRLYKKGVYTSTTCGNTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGGEWGDHGYFKMEMGKNMCGVATCSSYPVVA