Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32271.t1 | AFK39115.1 | 94.1 | 205 | 9 | 2 | 1 | 203 | 1 | 204 | 1.20E-102 | 382.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32271.t1 | Q9C8M2 | 72.0 | 157 | 39 | 2 | 43 | 199 | 43 | 194 | 6.2e-63 | 241.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32271.t1 | I3SN78 | 94.1 | 205 | 9 | 2 | 1 | 203 | 1 | 204 | 8.9e-103 | 382.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene32271 | 0.838847 | 2.25E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene32271 | 0.822341 | 2.49E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene32271 | 0.829406 | 5.24E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene32271 | 0.808354 | 3.23E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene32271 | 0.800806 | 1.21E-48 | -1.69E-46 |
| MS.gene049633 | MS.gene32271 | 0.879177 | 1.54E-69 | -1.69E-46 |
| MS.gene050170 | MS.gene32271 | 0.867033 | 1.84E-65 | -1.69E-46 |
| MS.gene050323 | MS.gene32271 | 0.863035 | 3.32E-64 | -1.69E-46 |
| MS.gene050338 | MS.gene32271 | -0.851801 | 7.00E-61 | -1.69E-46 |
| MS.gene050444 | MS.gene32271 | 0.846855 | 1.67E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene32271 | 0.839325 | 1.70E-57 | -1.69E-46 |
| MS.gene050504 | MS.gene32271 | 0.809797 | 1.58E-50 | -1.69E-46 |
| MS.gene050518 | MS.gene32271 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene32271 | 0.819692 | 1.02E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene32271 | 0.845058 | 5.15E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene32271 | 0.827012 | 1.98E-54 | -1.69E-46 |
| MS.gene050697 | MS.gene32271 | 0.819459 | 1.15E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene32271 | 0.822282 | 2.58E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene32271 | 0.803263 | 3.79E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene32271 | 0.80702 | 6.20E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene32271 | 0.831365 | 1.74E-55 | -1.69E-46 |
| MS.gene05081 | MS.gene32271 | 0.832641 | 8.42E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene32271 | 0.833349 | 5.61E-56 | -1.69E-46 |
| MS.gene050871 | MS.gene32271 | 0.830449 | 2.92E-55 | -1.69E-46 |
| MS.gene050904 | MS.gene32271 | 0.850841 | 1.31E-60 | -1.69E-46 |
| MS.gene050950 | MS.gene32271 | 0.810283 | 1.24E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene32271 | 0.806942 | 6.44E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene32271 | 0.81907 | 1.41E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene32271 | 0.877897 | 4.35E-69 | -1.69E-46 |
| MS.gene051617 | MS.gene32271 | 0.817708 | 2.87E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene32271 | -0.854135 | 1.51E-61 | -1.69E-46 |
| MS.gene051838 | MS.gene32271 | 0.864525 | 1.14E-64 | -1.69E-46 |
| MS.gene051941 | MS.gene32271 | 0.811335 | 7.37E-51 | -1.69E-46 |
| MS.gene052129 | MS.gene32271 | -0.833285 | 5.82E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene32271 | 0.814288 | 1.66E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene32271 | 0.805815 | 1.11E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene32271 | 0.808619 | 2.83E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene32271 | 0.809033 | 2.31E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene32271 | 0.871381 | 7.14E-67 | -1.69E-46 |
| MS.gene052872 | MS.gene32271 | 0.885687 | 6.56E-72 | -1.69E-46 |
| MS.gene052966 | MS.gene32271 | 0.823588 | 1.28E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene32271 | 0.818515 | 1.88E-52 | -1.69E-46 |
| MS.gene053479 | MS.gene32271 | 0.86802 | 8.90E-66 | -1.69E-46 |
| MS.gene053480 | MS.gene32271 | 0.845078 | 5.08E-59 | -1.69E-46 |
| MS.gene053776 | MS.gene32271 | -0.807936 | 3.96E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene32271 | 0.858818 | 6.34E-63 | -1.69E-46 |
| MS.gene054107 | MS.gene32271 | 0.820667 | 6.08E-53 | -1.69E-46 |
| MS.gene054344 | MS.gene32271 | 0.829526 | 4.90E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene32271 | 0.802769 | 4.79E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene32271 | -0.800565 | 1.36E-48 | -1.69E-46 |
| MS.gene054706 | MS.gene32271 | -0.801648 | 8.15E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene32271 | 0.834116 | 3.61E-56 | -1.69E-46 |
| MS.gene054850 | MS.gene32271 | -0.81097 | 8.84E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene32271 | -0.825418 | 4.74E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene32271 | -0.817468 | 3.25E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene32271 | 0.827785 | 1.29E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene32271 | 0.823267 | 1.52E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene32271 | 0.819452 | 1.15E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene32271 | 0.834203 | 3.43E-56 | -1.69E-46 |
| MS.gene055251 | MS.gene32271 | -0.823104 | 1.66E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene32271 | 0.828451 | 8.93E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene32271 | 0.82774 | 1.32E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene32271 | 0.863141 | 3.08E-64 | -1.69E-46 |
| MS.gene055750 | MS.gene32271 | 0.834385 | 3.09E-56 | -1.69E-46 |
| MS.gene055751 | MS.gene32271 | 0.863301 | 2.74E-64 | -1.69E-46 |
| MS.gene05589 | MS.gene32271 | 0.876681 | 1.15E-68 | -1.69E-46 |
| MS.gene055941 | MS.gene32271 | 0.833912 | 4.06E-56 | -1.69E-46 |
| MS.gene056266 | MS.gene32271 | 0.816498 | 5.36E-52 | -1.69E-46 |
| MS.gene056283 | MS.gene32271 | 0.803614 | 3.20E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene32271 | 0.871296 | 7.61E-67 | -1.69E-46 |
| MS.gene056504 | MS.gene32271 | 0.849875 | 2.44E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene32271 | 0.825475 | 4.60E-54 | -1.69E-46 |
| MS.gene056618 | MS.gene32271 | -0.845456 | 4.02E-59 | -1.69E-46 |
| MS.gene056657 | MS.gene32271 | 0.815883 | 7.36E-52 | -1.69E-46 |
| MS.gene056678 | MS.gene32271 | -0.810804 | 9.61E-51 | -1.69E-46 |
| MS.gene056688 | MS.gene32271 | -0.809708 | 1.66E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene32271 | 0.826208 | 3.08E-54 | -1.69E-46 |
| MS.gene056694 | MS.gene32271 | -0.824042 | 1.00E-53 | -1.69E-46 |
| MS.gene056697 | MS.gene32271 | -0.826495 | 2.63E-54 | -1.69E-46 |
| MS.gene056856 | MS.gene32271 | -0.821469 | 3.97E-53 | -1.69E-46 |
| MS.gene056857 | MS.gene32271 | -0.808131 | 3.60E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene32271 | 0.830072 | 3.61E-55 | -1.69E-46 |
| MS.gene057332 | MS.gene32271 | 0.835704 | 1.44E-56 | -1.69E-46 |
| MS.gene057658 | MS.gene32271 | 0.829746 | 4.33E-55 | -1.69E-46 |
| MS.gene057717 | MS.gene32271 | -0.836378 | 9.69E-57 | -1.69E-46 |
| MS.gene057831 | MS.gene32271 | 0.837585 | 4.76E-57 | -1.69E-46 |
| MS.gene058334 | MS.gene32271 | -0.81791 | 2.58E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene32271 | 0.826451 | 2.69E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene32271 | 0.839637 | 1.41E-57 | -1.69E-46 |
| MS.gene058382 | MS.gene32271 | -0.804682 | 1.92E-49 | -1.69E-46 |
| MS.gene058418 | MS.gene32271 | -0.810498 | 1.12E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene32271 | 0.824926 | 6.20E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene32271 | 0.811251 | 7.69E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene32271 | 0.802539 | 5.35E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene32271 | 0.855879 | 4.69E-62 | -1.69E-46 |
| MS.gene059022 | MS.gene32271 | 0.806506 | 7.96E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene32271 | 0.86508 | 7.65E-65 | -1.69E-46 |
| MS.gene059079 | MS.gene32271 | 0.801245 | 9.86E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene32271 | 0.816606 | 5.07E-52 | -1.69E-46 |
| MS.gene05926 | MS.gene32271 | -0.851117 | 1.09E-60 | -1.69E-46 |
| MS.gene059526 | MS.gene32271 | -0.802881 | 4.55E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene32271 | 0.812258 | 4.64E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene32271 | 0.82874 | 7.60E-55 | -1.69E-46 |
| MS.gene059699 | MS.gene32271 | -0.804857 | 1.77E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene32271 | -0.801191 | 1.01E-48 | -1.69E-46 |
| MS.gene059718 | MS.gene32271 | 0.804336 | 2.27E-49 | -1.69E-46 |
| MS.gene059756 | MS.gene32271 | 0.805987 | 1.02E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene32271 | 0.828279 | 9.82E-55 | -1.69E-46 |
| MS.gene06000 | MS.gene32271 | 0.86522 | 6.92E-65 | -1.69E-46 |
| MS.gene06027 | MS.gene32271 | 0.815394 | 9.46E-52 | -1.69E-46 |
| MS.gene060405 | MS.gene32271 | -0.81864 | 1.76E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene32271 | 0.805575 | 1.25E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene32271 | 0.849213 | 3.74E-60 | -1.69E-46 |
| MS.gene060778 | MS.gene32271 | 0.805129 | 1.55E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene32271 | 0.819694 | 1.02E-52 | -1.69E-46 |
| MS.gene060823 | MS.gene32271 | -0.809162 | 2.17E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene32271 | 0.873115 | 1.89E-67 | -1.69E-46 |
| MS.gene061044 | MS.gene32271 | -0.835233 | 1.89E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene32271 | 0.803288 | 3.74E-49 | -1.69E-46 |
| MS.gene061231 | MS.gene32271 | 0.831506 | 1.61E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30166 | MS.gene32271 | PPI |
| MS.gene82727 | MS.gene32271 | PPI |
| MS.gene027087 | MS.gene32271 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32271.t1 | MTR_8g461030 | 94.764 | 191 | 9 | 1 | 13 | 203 | 15 | 204 | 8.00e-128 | 358 |
| MS.gene32271.t1 | MTR_4g092800 | 45.600 | 125 | 63 | 2 | 79 | 201 | 65 | 186 | 9.47e-34 | 119 |
| MS.gene32271.t1 | MTR_2g020930 | 43.200 | 125 | 66 | 2 | 79 | 201 | 11 | 132 | 7.06e-31 | 110 |
| MS.gene32271.t1 | MTR_2g020950 | 40.164 | 122 | 68 | 2 | 82 | 201 | 13 | 131 | 1.54e-26 | 99.4 |
| MS.gene32271.t1 | MTR_2g020900 | 40.594 | 101 | 51 | 3 | 105 | 201 | 47 | 142 | 6.08e-19 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32271.t1 | AT1G53670 | 80.159 | 126 | 25 | 0 | 74 | 199 | 69 | 194 | 5.59e-80 | 237 |
| MS.gene32271.t1 | AT1G53670 | 75.397 | 126 | 24 | 1 | 74 | 199 | 69 | 187 | 2.98e-73 | 220 |
| MS.gene32271.t1 | AT4G04800 | 44.000 | 125 | 65 | 2 | 79 | 201 | 50 | 171 | 4.25e-33 | 117 |
| MS.gene32271.t1 | AT4G04830 | 40.945 | 127 | 70 | 2 | 79 | 203 | 11 | 134 | 4.31e-31 | 110 |
| MS.gene32271.t1 | AT4G21840 | 44.262 | 122 | 63 | 2 | 80 | 199 | 18 | 136 | 6.39e-31 | 110 |
| MS.gene32271.t1 | AT4G21830 | 44.262 | 122 | 63 | 2 | 80 | 199 | 16 | 134 | 7.74e-31 | 110 |
| MS.gene32271.t1 | AT4G21830 | 44.262 | 122 | 63 | 2 | 80 | 199 | 19 | 137 | 1.36e-30 | 109 |
| MS.gene32271.t1 | AT4G21860 | 40.580 | 138 | 77 | 2 | 66 | 201 | 63 | 197 | 3.87e-30 | 110 |
| MS.gene32271.t1 | AT4G21860 | 40.580 | 138 | 77 | 2 | 66 | 201 | 63 | 197 | 3.87e-30 | 110 |
| MS.gene32271.t1 | AT4G21860 | 40.580 | 138 | 77 | 2 | 66 | 201 | 63 | 197 | 3.87e-30 | 110 |
| MS.gene32271.t1 | AT4G21850 | 43.443 | 122 | 64 | 2 | 80 | 199 | 19 | 137 | 1.03e-29 | 107 |
| MS.gene32271.t1 | AT4G04810 | 40.157 | 127 | 71 | 2 | 79 | 203 | 11 | 134 | 1.95e-28 | 104 |
| MS.gene32271.t1 | AT4G04840 | 39.024 | 123 | 70 | 3 | 79 | 199 | 27 | 146 | 4.46e-28 | 103 |
| MS.gene32271.t1 | AT4G04830 | 36.220 | 127 | 66 | 3 | 79 | 203 | 11 | 124 | 6.22e-23 | 89.7 |
| MS.gene32271.t1 | AT4G21850 | 43.902 | 82 | 45 | 1 | 80 | 160 | 19 | 100 | 1.25e-17 | 75.9 |
| MS.gene32271.t1 | AT4G21860 | 43.590 | 78 | 44 | 0 | 66 | 143 | 63 | 140 | 3.87e-17 | 76.3 |
| MS.gene32271.t1 | AT4G04810 | 45.455 | 66 | 36 | 0 | 79 | 144 | 11 | 76 | 7.88e-16 | 70.9 |
Find 42 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAATCAAATTTGTGAATT+TGG | 0.081140 | 8.3:-48852063 | None:intergenic |
| ATAAAGTACTTACTCAAATA+AGG | 0.239315 | 8.3:-48854819 | None:intergenic |
| AGAATCAAATTTGTGAATTT+GGG | 0.252355 | 8.3:-48852062 | None:intergenic |
| ACTTCCTTGGTTTGAGCTTA+AGG | 0.254966 | 8.3:-48855249 | None:intergenic |
| AATTTGTGAATTTGGGTATT+GGG | 0.342711 | 8.3:-48852055 | None:intergenic |
| CTTCCTTGGTTTGAGCTTAA+GGG | 0.347472 | 8.3:-48855248 | None:intergenic |
| CAAAACTTTCTTCTTCAATC+CGG | 0.352314 | 8.3:+48852131 | MS.gene32271:CDS |
| TTCTGTAGTGTTTGCGTCGT+TGG | 0.357559 | 8.3:-48852182 | None:intergenic |
| AAATTTGTGAATTTGGGTAT+TGG | 0.367865 | 8.3:-48852056 | None:intergenic |
| CTTAAAGATTTATAATCAAC+AGG | 0.401442 | 8.3:-48853664 | None:intergenic |
| ATGGTAAGTCCCTTCAGTTT+TGG | 0.402394 | 8.3:-48854777 | None:intergenic |
| ACCAAGTTTAATAGTGGAAC+TGG | 0.412251 | 8.3:+48854963 | MS.gene32271:CDS |
| TTCTTCTTCAATCCGGGCAA+TGG | 0.415084 | 8.3:+48852138 | MS.gene32271:CDS |
| ATTTGACTATCTTACTTCCT+TGG | 0.431236 | 8.3:-48855262 | None:intergenic |
| CCATCTTATTACCAGCCAAT+TGG | 0.432412 | 8.3:+48854990 | MS.gene32271:CDS |
| TCTTCTTCAATCCGGGCAAT+GGG | 0.433463 | 8.3:+48852139 | MS.gene32271:CDS |
| AAACAGCACAGAGAACTTCT+TGG | 0.444117 | 8.3:-48855061 | None:intergenic |
| AAAACTTTCTTCTTCAATCC+GGG | 0.445114 | 8.3:+48852132 | MS.gene32271:CDS |
| GAATTTGTGCAGCAGCTGAT+AGG | 0.447579 | 8.3:-48852030 | None:intergenic |
| TAAAGTACTTACTCAAATAA+GGG | 0.456545 | 8.3:-48854818 | None:intergenic |
| GAAAACGTTACTGTATCAAC+AGG | 0.465505 | 8.3:+48855132 | MS.gene32271:CDS |
| CCAATTGGCTGGTAATAAGA+TGG | 0.475719 | 8.3:-48854990 | None:intergenic |
| AACACTACAGAAATTCAATC+AGG | 0.493813 | 8.3:+48852193 | MS.gene32271:CDS |
| TCATCTACCAAGTTTAATAG+TGG | 0.496314 | 8.3:+48854957 | MS.gene32271:CDS |
| ACCAGTTCCACTATTAAACT+TGG | 0.499953 | 8.3:-48854964 | None:intergenic |
| AGCACAGAGAACTTCTTGGC+GGG | 0.512905 | 8.3:-48855057 | None:intergenic |
| AATCTTTAAGTGATGCAGAA+TGG | 0.513509 | 8.3:+48853677 | MS.gene32271:CDS |
| TCACCCAGTGAAAGCTCTCT+CGG | 0.541253 | 8.3:-48853749 | None:intergenic |
| GGAACCGAGAGAGCTTTCAC+TGG | 0.542234 | 8.3:+48853745 | MS.gene32271:CDS |
| GATGATGGCCCTCCACCCAC+AGG | 0.547765 | 8.3:+48855110 | MS.gene32271:CDS |
| AAGCTGAAGAGCCCATTGCC+CGG | 0.557701 | 8.3:-48852150 | None:intergenic |
| GCTGTTTGTGATGCTCATCT+CGG | 0.566492 | 8.3:+48855077 | MS.gene32271:CDS |
| TACTGGAATACCAAAACTGA+AGG | 0.570093 | 8.3:+48854767 | MS.gene32271:CDS |
| AGTAACATAAAATTGTTCAT+CGG | 0.572643 | 8.3:-48853713 | None:intergenic |
| AGTTTAATAGTGGAACTGGT+TGG | 0.589954 | 8.3:+48854967 | MS.gene32271:CDS |
| CAGCACAGAGAACTTCTTGG+CGG | 0.609123 | 8.3:-48855058 | None:intergenic |
| GCACAGAGAACTTCTTGGCG+GGG | 0.628010 | 8.3:-48855056 | None:intergenic |
| GTGTGTCACAACATATGCAA+TGG | 0.629248 | 8.3:-48854796 | None:intergenic |
| CTTCCCTTAAGCTCAAACCA+AGG | 0.648370 | 8.3:+48855245 | MS.gene32271:CDS |
| ACTGGAATACCAAAACTGAA+GGG | 0.657265 | 8.3:+48854768 | MS.gene32271:CDS |
| GAACCGAGAGAGCTTTCACT+GGG | 0.657323 | 8.3:+48853746 | MS.gene32271:CDS |
| AGTTTGGTAAGAAAACGCGA+TGG | 0.728635 | 8.3:-48852100 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATTTAACCAAATATA+TGG | + | chr8.3:48854890-48854909 | MS.gene32271:intron | 10.0% |
| !!! | TGTTTTTTTAATTCATTTTA+GGG | + | chr8.3:48854742-48854761 | MS.gene32271:intron | 10.0% |
| !! | AAATTTATTATTCAATTTGC+TGG | + | chr8.3:48852703-48852722 | MS.gene32271:intron | 15.0% |
| !! | CCTTTAATGTAAAATAAATT+TGG | - | chr8.3:48854094-48854113 | None:intergenic | 15.0% |
| !! | TAATAAAGAGATTGATATAT+AGG | + | chr8.3:48853542-48853561 | MS.gene32271:intron | 15.0% |
| !! | TTAAATAGACATAAAAATCA+AGG | - | chr8.3:48854039-48854058 | None:intergenic | 15.0% |
| !! | TTTATTTCCTCAAATTATTA+CGG | + | chr8.3:48853919-48853938 | MS.gene32271:intron | 15.0% |
| !!! | CCAAATTTATTTTACATTAA+AGG | + | chr8.3:48854091-48854110 | MS.gene32271:intron | 15.0% |
| !!! | CTGTTTTTTTAATTCATTTT+AGG | + | chr8.3:48854741-48854760 | MS.gene32271:intron | 15.0% |
| !! | AAAATGAAAATAGGAGAAAT+TGG | + | chr8.3:48852813-48852832 | MS.gene32271:intron | 20.0% |
| !! | AACAAAATTGTACAAGAAAA+TGG | + | chr8.3:48852753-48852772 | MS.gene32271:intron | 20.0% |
| !! | AGAATCAAATTTGTGAATTT+GGG | - | chr8.3:48852065-48852084 | None:intergenic | 20.0% |
| !! | AGTAAAGAAAAAAAAAAGTG+AGG | - | chr8.3:48852242-48852261 | None:intergenic | 20.0% |
| !! | AGTAACATAAAATTGTTCAT+CGG | - | chr8.3:48853716-48853735 | None:intergenic | 20.0% |
| !! | CTTAAAGATTTATAATCAAC+AGG | - | chr8.3:48853667-48853686 | None:intergenic | 20.0% |
| !! | TAGAATCAAATTTGTGAATT+TGG | - | chr8.3:48852066-48852085 | None:intergenic | 20.0% |
| !! | TCCAAGTTCTATATTTAAAA+CGG | + | chr8.3:48854450-48854469 | MS.gene32271:intron | 20.0% |
| !!! | ATAAAGTACTTACTCAAATA+AGG | - | chr8.3:48854822-48854841 | None:intergenic | 20.0% |
| !!! | ATATTTTGATAGAAACAAAC+TGG | + | chr8.3:48852369-48852388 | MS.gene32271:intron | 20.0% |
| !!! | ATGAACAATTTTATGTTACT+CGG | + | chr8.3:48853716-48853735 | MS.gene32271:CDS | 20.0% |
| !!! | TAAAGTACTTACTCAAATAA+GGG | - | chr8.3:48854821-48854840 | None:intergenic | 20.0% |
| !!! | TGTATCAAGTTTTTCATATT+GGG | - | chr8.3:48854550-48854569 | None:intergenic | 20.0% |
| ! | AAAAAATATTATTAGGAGGG+GGG | + | chr8.3:48852533-48852552 | MS.gene32271:intron | 25.0% |
| ! | AAATTTGTGAATTTGGGTAT+TGG | - | chr8.3:48852059-48852078 | None:intergenic | 25.0% |
| ! | AACTTTGTCACAAGAATATA+TGG | - | chr8.3:48854653-48854672 | None:intergenic | 25.0% |
| ! | AAGAGATTGATATATAGGAA+CGG | + | chr8.3:48853547-48853566 | MS.gene32271:intron | 25.0% |
| ! | AATTTGTGAATTTGGGTATT+GGG | - | chr8.3:48852058-48852077 | None:intergenic | 25.0% |
| ! | ACAGCCGAAAAAATATTATT+AGG | + | chr8.3:48852526-48852545 | MS.gene32271:intron | 25.0% |
| ! | ACTGAAGTGAAAATGAAAAT+AGG | + | chr8.3:48852804-48852823 | MS.gene32271:intron | 25.0% |
| ! | ATTAATAACTCTGTTTGTAG+GGG | + | chr8.3:48852558-48852577 | MS.gene32271:intron | 25.0% |
| ! | CAAGATTGATAAGTTTAGAA+GGG | + | chr8.3:48852395-48852414 | MS.gene32271:intron | 25.0% |
| ! | CATTAATAACTCTGTTTGTA+GGG | + | chr8.3:48852557-48852576 | MS.gene32271:intron | 25.0% |
| ! | CCGAAAAAATATTATTAGGA+GGG | + | chr8.3:48852530-48852549 | MS.gene32271:intron | 25.0% |
| ! | CGAAAAAATATTATTAGGAG+GGG | + | chr8.3:48852531-48852550 | MS.gene32271:intron | 25.0% |
| ! | GAAAAAATATTATTAGGAGG+GGG | + | chr8.3:48852532-48852551 | MS.gene32271:intron | 25.0% |
| ! | TCAAGATTGATAAGTTTAGA+AGG | + | chr8.3:48852394-48852413 | MS.gene32271:intron | 25.0% |
| ! | TTATAAGTTCAAGATGATTC+AGG | - | chr8.3:48854916-48854935 | None:intergenic | 25.0% |
| !! | AAAGAATCACTTGTTGAATT+GGG | + | chr8.3:48855156-48855175 | MS.gene32271:intron | 25.0% |
| !! | AAAGTTGTATGTTGGTTATA+AGG | + | chr8.3:48853189-48853208 | MS.gene32271:intron | 25.0% |
| !! | ATTTTATGTTACTCGGAAAA+AGG | + | chr8.3:48853723-48853742 | MS.gene32271:CDS | 25.0% |
| !! | CCAAGTTCTATATTTAAAAC+GGG | + | chr8.3:48854451-48854470 | MS.gene32271:intron | 25.0% |
| !! | GATTTCACATTTTTACCAAT+TGG | - | chr8.3:48855008-48855027 | None:intergenic | 25.0% |
| !! | GTGTATCAAGTTTTTCATAT+TGG | - | chr8.3:48854551-48854570 | None:intergenic | 25.0% |
| !! | TAAAGAATCACTTGTTGAAT+TGG | + | chr8.3:48855155-48855174 | MS.gene32271:intron | 25.0% |
| !! | TTCTATATTTAAAACGGGAA+AGG | + | chr8.3:48854456-48854475 | MS.gene32271:intron | 25.0% |
| !! | TTGATTCTAAACTTTTGTTG+TGG | + | chr8.3:48852077-48852096 | MS.gene32271:CDS | 25.0% |
| !! | TTTTATGTTACTCGGAAAAA+GGG | + | chr8.3:48853724-48853743 | MS.gene32271:CDS | 25.0% |
| !!! | AAGTTTTGAAGAAGAAAGTT+TGG | - | chr8.3:48852119-48852138 | None:intergenic | 25.0% |
| !!! | CCCTCCTAATAATATTTTTT+CGG | - | chr8.3:48852533-48852552 | None:intergenic | 25.0% |
| AAAACTTTCTTCTTCAATCC+GGG | + | chr8.3:48852132-48852151 | MS.gene32271:CDS | 30.0% | |
| AACACACAATCATTGAAAGA+AGG | + | chr8.3:48854123-48854142 | MS.gene32271:intron | 30.0% | |
| AACACTACAGAAATTCAATC+AGG | + | chr8.3:48852193-48852212 | MS.gene32271:CDS | 30.0% | |
| AACATACATGTAACGTTTAG+AGG | + | chr8.3:48853347-48853366 | MS.gene32271:intron | 30.0% | |
| AATCTTTAAGTGATGCAGAA+TGG | + | chr8.3:48853677-48853696 | MS.gene32271:CDS | 30.0% | |
| ACATACATGTAACGTTTAGA+GGG | + | chr8.3:48853348-48853367 | MS.gene32271:intron | 30.0% | |
| ACATTGCCCTTAATCATATA+TGG | - | chr8.3:48854619-48854638 | None:intergenic | 30.0% | |
| AGAAGGGAAAAAAAATCTAG+TGG | + | chr8.3:48852411-48852430 | MS.gene32271:intron | 30.0% | |
| ATATGATTAAGGGCAATGTA+AGG | + | chr8.3:48854620-48854639 | MS.gene32271:intron | 30.0% | |
| ATCCTTGTATCTTTCATTTC+AGG | - | chr8.3:48854362-48854381 | None:intergenic | 30.0% | |
| ATTAAACTTGGTAGATGATC+TGG | - | chr8.3:48854955-48854974 | None:intergenic | 30.0% | |
| CAAAACTTTCTTCTTCAATC+CGG | + | chr8.3:48852131-48852150 | MS.gene32271:CDS | 30.0% | |
| CAGGTATTCATTATTCTCTT+GGG | + | chr8.3:48852212-48852231 | MS.gene32271:intron | 30.0% | |
| CCATTAATAACTCTGTTTGT+AGG | + | chr8.3:48852556-48852575 | MS.gene32271:intron | 30.0% | |
| CCTACAAACAGAGTTATTAA+TGG | - | chr8.3:48852559-48852578 | None:intergenic | 30.0% | |
| GAAGGGAAAAAAAATCTAGT+GGG | + | chr8.3:48852412-48852431 | MS.gene32271:intron | 30.0% | |
| GCCGAAAAAATATTATTAGG+AGG | + | chr8.3:48852529-48852548 | MS.gene32271:intron | 30.0% | |
| GTCAGACTATACTTACTTAA+TGG | + | chr8.3:48852449-48852468 | MS.gene32271:intron | 30.0% | |
| TACCTGAAATGAAAGATACA+AGG | + | chr8.3:48854357-48854376 | MS.gene32271:intron | 30.0% | |
| TCAGGTATTCATTATTCTCT+TGG | + | chr8.3:48852211-48852230 | MS.gene32271:intron | 30.0% | |
| TCATCTACCAAGTTTAATAG+TGG | + | chr8.3:48854957-48854976 | MS.gene32271:CDS | 30.0% | |
| TCTAAACGTTACATGTATGT+TGG | - | chr8.3:48853348-48853367 | None:intergenic | 30.0% | |
| TGGTGTCCATATATGATTAA+GGG | + | chr8.3:48854610-48854629 | MS.gene32271:intron | 30.0% | |
| TGTTCATTGTATTTCACTTG+TGG | + | chr8.3:48854321-48854340 | MS.gene32271:intron | 30.0% | |
| ! | ATTGGAGTGGTAAATTGTTT+TGG | + | chr8.3:48853055-48853074 | MS.gene32271:intron | 30.0% |
| ! | TAACCAACATACAACTTTTC+AGG | - | chr8.3:48853187-48853206 | None:intergenic | 30.0% |
| ! | TTGCTGTTGAAAATTGAATG+GGG | + | chr8.3:48853306-48853325 | MS.gene32271:intron | 30.0% |
| ! | TTGGTGTCCATATATGATTA+AGG | + | chr8.3:48854609-48854628 | MS.gene32271:intron | 30.0% |
| !! | CCCGTTTTAAATATAGAACT+TGG | - | chr8.3:48854454-48854473 | None:intergenic | 30.0% |
| !! | CCTTACAAAATTGACTTGAA+AGG | - | chr8.3:48854517-48854536 | None:intergenic | 30.0% |
| !! | CCTTTCAAGTCAATTTTGTA+AGG | + | chr8.3:48854514-48854533 | MS.gene32271:intron | 30.0% |
| !! | CTTGCTGTTGAAAATTGAAT+GGG | + | chr8.3:48853305-48853324 | MS.gene32271:intron | 30.0% |
| !! | GTCTAAAAGCTTGTTTGTTT+TGG | + | chr8.3:48855209-48855228 | MS.gene32271:intron | 30.0% |
| !! | TAATTCATTTTAGGGAGTAC+TGG | + | chr8.3:48854750-48854769 | MS.gene32271:intron | 30.0% |
| AAAGCACAGAAAGAAGTTGT+TGG | - | chr8.3:48853632-48853651 | None:intergenic | 35.0% | |
| AATTGTACAAGAAAATGGCG+AGG | + | chr8.3:48852758-48852777 | MS.gene32271:intron | 35.0% | |
| ACAGAAAGAAGTTGTTGGAT+TGG | - | chr8.3:48853627-48853646 | None:intergenic | 35.0% | |
| ACCAGTTCCACTATTAAACT+TGG | - | chr8.3:48854967-48854986 | None:intergenic | 35.0% | |
| ACTCTTCAGACACAACATTA+AGG | - | chr8.3:48852854-48852873 | None:intergenic | 35.0% | |
| ACTGGAATACCAAAACTGAA+GGG | + | chr8.3:48854768-48854787 | MS.gene32271:CDS | 35.0% | |
| AGACAAATGTGAGCTTATAC+AGG | - | chr8.3:48855193-48855212 | None:intergenic | 35.0% | |
| AGTTTACTTCTCTACCATGT+TGG | + | chr8.3:48854669-48854688 | MS.gene32271:intron | 35.0% | |
| ATTACTAGAGCCATTTCCTT+GGG | + | chr8.3:48852483-48852502 | MS.gene32271:intron | 35.0% | |
| ATTGTACAAGAAAATGGCGA+GGG | + | chr8.3:48852759-48852778 | MS.gene32271:intron | 35.0% | |
| CATACATGTAACGTTTAGAG+GGG | + | chr8.3:48853349-48853368 | MS.gene32271:intron | 35.0% | |
| CGATCGATATATATGTGCTT+TGG | + | chr8.3:48853597-48853616 | MS.gene32271:intron | 35.0% | |
| CTCTTCAGACACAACATTAA+GGG | - | chr8.3:48852853-48852872 | None:intergenic | 35.0% | |
| CTTACTTAATGGTCGAACTT+AGG | + | chr8.3:48852460-48852479 | MS.gene32271:intron | 35.0% | |
| GAAAACGTTACTGTATCAAC+AGG | + | chr8.3:48855132-48855151 | MS.gene32271:CDS | 35.0% | |
| GAACAAAACTGCAATCAATG+AGG | - | chr8.3:48854162-48854181 | None:intergenic | 35.0% | |
| GAACCTGAAAAGTTGTATGT+TGG | + | chr8.3:48853181-48853200 | MS.gene32271:intron | 35.0% | |
| GATGATTCAGGCCATATATT+TGG | - | chr8.3:48854904-48854923 | None:intergenic | 35.0% | |
| GTGACATCTTCAACTAATTG+TGG | - | chr8.3:48854291-48854310 | None:intergenic | 35.0% | |
| TACTGGAATACCAAAACTGA+AGG | + | chr8.3:48854767-48854786 | MS.gene32271:CDS | 35.0% | |
| TGAGTGATAAGCAAGTCAAA+AGG | - | chr8.3:48854004-48854023 | None:intergenic | 35.0% | |
| ! | ACCAAGTTTAATAGTGGAAC+TGG | + | chr8.3:48854963-48854982 | MS.gene32271:CDS | 35.0% |
| ! | AGTTTAATAGTGGAACTGGT+TGG | + | chr8.3:48854967-48854986 | MS.gene32271:CDS | 35.0% |
| ! | ATACAGTAACGTTTTCCTGT+GGG | - | chr8.3:48855128-48855147 | None:intergenic | 35.0% |
| ! | ATCTCTTTAGAGAACCAACA+TGG | - | chr8.3:48854686-48854705 | None:intergenic | 35.0% |
| ! | GGTTCTCTAAAGAGATATTG+TGG | + | chr8.3:48854690-48854709 | MS.gene32271:intron | 35.0% |
| ! | TATGTTGGTTATAAGGCTGA+TGG | + | chr8.3:48853196-48853215 | MS.gene32271:intron | 35.0% |
| ! | TCACATTTTTACCAATTGGC+TGG | - | chr8.3:48855004-48855023 | None:intergenic | 35.0% |
| ! | TTGAATGCCCATTGTTTTCA+AGG | + | chr8.3:48852625-48852644 | MS.gene32271:intron | 35.0% |
| !! | AGATAACGGACATAATACCA+AGG | - | chr8.3:48853946-48853965 | None:intergenic | 35.0% |
| !! | GCTTGCTGTTGAAAATTGAA+TGG | + | chr8.3:48853304-48853323 | MS.gene32271:intron | 35.0% |
| !! | GTGCATTTGGCTTTAATACT+TGG | + | chr8.3:48854590-48854609 | MS.gene32271:intron | 35.0% |
| !! | TATTCAATTTGCTGGCTTTG+TGG | + | chr8.3:48852711-48852730 | MS.gene32271:intron | 35.0% |
| !!! | ACAACTTTTCAGGTTCATGA+TGG | - | chr8.3:48853177-48853196 | None:intergenic | 35.0% |
| !!! | AGTTTTCTAGTTCTCACCAT+TGG | + | chr8.3:48854227-48854246 | MS.gene32271:intron | 35.0% |
| !!! | CTCTATGCTATTTTCAGTGA+TGG | + | chr8.3:48853397-48853416 | MS.gene32271:intron | 35.0% |
| !!! | GAGTTAGTTTTGTGTGCATT+TGG | + | chr8.3:48854577-48854596 | MS.gene32271:intron | 35.0% |
| !!! | TGCAGTTTTGTTCACAAATG+TGG | + | chr8.3:48854169-48854188 | MS.gene32271:intron | 35.0% |
| AAACAGCACAGAGAACTTCT+TGG | - | chr8.3:48855064-48855083 | None:intergenic | 40.0% | |
| AACTATGGCTTCACATGAGA+TGG | + | chr8.3:48853020-48853039 | MS.gene32271:intron | 40.0% | |
| AACTTCTTTCTGTGCTTTGC+AGG | + | chr8.3:48853634-48853653 | MS.gene32271:intron | 40.0% | |
| AAGACTGGAGTGGAGTTAAT+AGG | + | chr8.3:48853263-48853282 | MS.gene32271:intron | 40.0% | |
| ACCAACACAGACACAGATAA+CGG | - | chr8.3:48853960-48853979 | None:intergenic | 40.0% | |
| ACCAAGAACAAGAGATGCTA+AGG | - | chr8.3:48853453-48853472 | None:intergenic | 40.0% | |
| AGTTTGGTAAGAAAACGCGA+TGG | - | chr8.3:48852103-48852122 | None:intergenic | 40.0% | |
| ATAAGCAAGTCAAAAGGCCA+TGG | - | chr8.3:48853998-48854017 | None:intergenic | 40.0% | |
| CCAAGGTCCGTAATAATTTG+AGG | - | chr8.3:48853929-48853948 | None:intergenic | 40.0% | |
| CCAATTGGCTGGTAATAAGA+TGG | - | chr8.3:48854993-48855012 | None:intergenic | 40.0% | |
| CCATCTTATTACCAGCCAAT+TGG | + | chr8.3:48854990-48855009 | MS.gene32271:CDS | 40.0% | |
| CCTCAAATTATTACGGACCT+TGG | + | chr8.3:48853926-48853945 | MS.gene32271:intron | 40.0% | |
| CGCACAACCTTGAAAACAAT+GGG | - | chr8.3:48852635-48852654 | None:intergenic | 40.0% | |
| CTCAACATCAAGCCTTTAAG+AGG | - | chr8.3:48853142-48853161 | None:intergenic | 40.0% | |
| CTCATGTGAAGCCATAGTTT+GGG | - | chr8.3:48853019-48853038 | None:intergenic | 40.0% | |
| CTGATTAGTGCACCTCTTAA+AGG | + | chr8.3:48853127-48853146 | MS.gene32271:intron | 40.0% | |
| GAAACCTGTGTGATGTTCAT+TGG | - | chr8.3:48854253-48854272 | None:intergenic | 40.0% | |
| GATTACTAGAGCCATTTCCT+TGG | + | chr8.3:48852482-48852501 | MS.gene32271:intron | 40.0% | |
| GTGTGTCACAACATATGCAA+TGG | - | chr8.3:48854799-48854818 | None:intergenic | 40.0% | |
| TAACTCTGTTTGTAGGGGTA+TGG | + | chr8.3:48852563-48852582 | MS.gene32271:intron | 40.0% | |
| TCCTTAGCATCTCTTGTTCT+TGG | + | chr8.3:48853449-48853468 | MS.gene32271:intron | 40.0% | |
| TCGCACAACCTTGAAAACAA+TGG | - | chr8.3:48852636-48852655 | None:intergenic | 40.0% | |
| TCTCATGTGAAGCCATAGTT+TGG | - | chr8.3:48853020-48853039 | None:intergenic | 40.0% | |
| TCTGAAGAGTTCGAGTAAGA+AGG | + | chr8.3:48852864-48852883 | MS.gene32271:intron | 40.0% | |
| TTTCAGTGATGGTAGTAGCA+AGG | + | chr8.3:48853408-48853427 | MS.gene32271:intron | 40.0% | |
| ! | AACTCTGTTTGTAGGGGTAT+GGG | + | chr8.3:48852564-48852583 | MS.gene32271:intron | 40.0% |
| ! | ACTTCCTTGGTTTGAGCTTA+AGG | - | chr8.3:48855252-48855271 | None:intergenic | 40.0% |
| ! | ATGGTAAGTCCCTTCAGTTT+TGG | - | chr8.3:48854780-48854799 | None:intergenic | 40.0% |
| ! | CACTGGGTGAGTTTAAGATT+GGG | + | chr8.3:48853762-48853781 | MS.gene32271:intron | 40.0% |
| ! | CTCGGACACATTTTTGATGA+TGG | + | chr8.3:48855095-48855114 | MS.gene32271:CDS | 40.0% |
| ! | CTTCCTTGGTTTGAGCTTAA+GGG | - | chr8.3:48855251-48855270 | None:intergenic | 40.0% |
| ! | GAAAGAAGTTGTTGGATTGG+AGG | - | chr8.3:48853624-48853643 | None:intergenic | 40.0% |
| ! | GATACAGTAACGTTTTCCTG+TGG | - | chr8.3:48855129-48855148 | None:intergenic | 40.0% |
| ! | TCACTGGGTGAGTTTAAGAT+TGG | + | chr8.3:48853761-48853780 | MS.gene32271:intron | 40.0% |
| !! | AAATTGACTTGAAAGGCGAC+AGG | - | chr8.3:48854510-48854529 | None:intergenic | 40.0% |
| !! | ATTGTTTTCAAGGTTGTGCG+AGG | + | chr8.3:48852635-48852654 | MS.gene32271:intron | 40.0% |
| !!! | ATTGTTTTGGCGGATGGTTT+TGG | + | chr8.3:48853068-48853087 | MS.gene32271:intron | 40.0% |
| !!! | GGAGTGGTAAATTGTTTTGG+CGG | + | chr8.3:48853058-48853077 | MS.gene32271:intron | 40.0% |
| !!! | TGGTAAATTGTTTTGGCGGA+TGG | + | chr8.3:48853062-48853081 | MS.gene32271:intron | 40.0% |
| ACATGTAACGTTTAGAGGGG+TGG | + | chr8.3:48853352-48853371 | MS.gene32271:intron | 45.0% | |
| AGATGGTGAAGGGGCTTAAT+TGG | + | chr8.3:48853037-48853056 | MS.gene32271:intron | 45.0% | |
| CACACTTCTGCAGCAGATTT+GGG | - | chr8.3:48852987-48853006 | None:intergenic | 45.0% | |
| CTTCACATGAGATGGTGAAG+GGG | + | chr8.3:48853028-48853047 | MS.gene32271:intron | 45.0% | |
| CTTCCCTTAAGCTCAAACCA+AGG | + | chr8.3:48855245-48855264 | MS.gene32271:CDS | 45.0% | |
| GAATTTGTGCAGCAGCTGAT+AGG | - | chr8.3:48852033-48852052 | None:intergenic | 45.0% | |
| GAGTGGAGTTAATAGGTGTG+GGG | + | chr8.3:48853270-48853289 | MS.gene32271:intron | 45.0% | |
| GCTAAGCTTAAGTCATCACC+TGG | + | chr8.3:48853097-48853116 | MS.gene32271:intron | 45.0% | |
| GCTGTTTGTGATGCTCATCT+CGG | + | chr8.3:48855077-48855096 | MS.gene32271:CDS | 45.0% | |
| GCTTCACATGAGATGGTGAA+GGG | + | chr8.3:48853027-48853046 | MS.gene32271:intron | 45.0% | |
| GGAGTGGAGTTAATAGGTGT+GGG | + | chr8.3:48853269-48853288 | MS.gene32271:intron | 45.0% | |
| GTGTGATGTTCATTGGCCAA+TGG | - | chr8.3:48854246-48854265 | None:intergenic | 45.0% | |
| TCCGTTATCTGTGTCTGTGT+TGG | + | chr8.3:48853956-48853975 | MS.gene32271:intron | 45.0% | |
| TCTTCTTCAATCCGGGCAAT+GGG | + | chr8.3:48852139-48852158 | MS.gene32271:CDS | 45.0% | |
| TGAAGACACTTTGCAGCAGA+TGG | + | chr8.3:48852931-48852950 | MS.gene32271:intron | 45.0% | |
| TGGAGTGGAGTTAATAGGTG+TGG | + | chr8.3:48853268-48853287 | MS.gene32271:intron | 45.0% | |
| TGGGAAGCTATCCCAAACTA+TGG | + | chr8.3:48853005-48853024 | MS.gene32271:intron | 45.0% | |
| TGTCTGACACTCATACGACA+CGG | + | chr8.3:48853877-48853896 | MS.gene32271:intron | 45.0% | |
| TGTTAATCCTCCAGTTCCCA+AGG | - | chr8.3:48852502-48852521 | None:intergenic | 45.0% | |
| TTCTGTAGTGTTTGCGTCGT+TGG | - | chr8.3:48852185-48852204 | None:intergenic | 45.0% | |
| TTCTTCTTCAATCCGGGCAA+TGG | + | chr8.3:48852138-48852157 | MS.gene32271:CDS | 45.0% | |
| TTGGCCAATGAACATCACAC+AGG | + | chr8.3:48854246-48854265 | MS.gene32271:intron | 45.0% | |
| ! | ACTCTGTTTGTAGGGGTATG+GGG | + | chr8.3:48852565-48852584 | MS.gene32271:intron | 45.0% |
| ! | CAAATCTGCTGCAGAAGTGT+GGG | + | chr8.3:48852986-48853005 | MS.gene32271:intron | 45.0% |
| !! | AATTTGCTGGCTTTGTGGAG+TGG | + | chr8.3:48852716-48852735 | MS.gene32271:intron | 45.0% |
| !!! | TTTTGGCGGATGGTTTTGGA+GGG | + | chr8.3:48853072-48853091 | MS.gene32271:intron | 45.0% |
| ACTCCACTCCAGTCTTACGA+CGG | - | chr8.3:48853259-48853278 | None:intergenic | 50.0% | |
| AGAGCCATTTCCTTGGGAAC+TGG | + | chr8.3:48852489-48852508 | MS.gene32271:intron | 50.0% | |
| AGCACAGAGAACTTCTTGGC+GGG | - | chr8.3:48855060-48855079 | None:intergenic | 50.0% | |
| AGGCCATGGTAACACGACTT+TGG | - | chr8.3:48853984-48854003 | None:intergenic | 50.0% | |
| CAGCACAGAGAACTTCTTGG+CGG | - | chr8.3:48855061-48855080 | None:intergenic | 50.0% | |
| CCAAATCTGCTGCAGAAGTG+TGG | + | chr8.3:48852985-48853004 | MS.gene32271:intron | 50.0% | |
| CCACACTTCTGCAGCAGATT+TGG | - | chr8.3:48852988-48853007 | None:intergenic | 50.0% | |
| CCCTGCGAATACACACTACA+CGG | - | chr8.3:48852895-48852914 | None:intergenic | 50.0% | |
| CCGTGTAGTGTGTATTCGCA+GGG | + | chr8.3:48852892-48852911 | MS.gene32271:intron | 50.0% | |
| GAACCGAGAGAGCTTTCACT+GGG | + | chr8.3:48853746-48853765 | MS.gene32271:CDS | 50.0% | |
| GCACTAATCAGCACAGATCC+AGG | - | chr8.3:48853118-48853137 | None:intergenic | 50.0% | |
| GGCTTCACATGAGATGGTGA+AGG | + | chr8.3:48853026-48853045 | MS.gene32271:intron | 50.0% | |
| GTAGTGTGTATTCGCAGGGT+GGG | + | chr8.3:48852896-48852915 | MS.gene32271:intron | 50.0% | |
| GTGAAGGGGCTTAATTGGAG+TGG | + | chr8.3:48853042-48853061 | MS.gene32271:intron | 50.0% | |
| GTGCCAAAGTCGTGTTACCA+TGG | + | chr8.3:48853978-48853997 | MS.gene32271:intron | 50.0% | |
| TCACCCAGTGAAAGCTCTCT+CGG | - | chr8.3:48853752-48853771 | None:intergenic | 50.0% | |
| TCCTCCAGTTCCCAAGGAAA+TGG | - | chr8.3:48852496-48852515 | None:intergenic | 50.0% | |
| TGTAGTGTGTATTCGCAGGG+TGG | + | chr8.3:48852895-48852914 | MS.gene32271:intron | 50.0% | |
| ! | AACGTTTTCCTGTGGGTGGA+GGG | - | chr8.3:48855121-48855140 | None:intergenic | 50.0% |
| ! | CAGTAACGTTTTCCTGTGGG+TGG | - | chr8.3:48855125-48855144 | None:intergenic | 50.0% |
| ! | CTCTGTTTGTAGGGGTATGG+GGG | + | chr8.3:48852566-48852585 | MS.gene32271:intron | 50.0% |
| ! | TAACGTTTTCCTGTGGGTGG+AGG | - | chr8.3:48855122-48855141 | None:intergenic | 50.0% |
| ! | TCTGTTTGTAGGGGTATGGG+GGG | + | chr8.3:48852567-48852586 | MS.gene32271:intron | 50.0% |
| !! | GTTTTCAAGGTTGTGCGAGG+TGG | + | chr8.3:48852638-48852657 | MS.gene32271:intron | 50.0% |
| !!! | GTTTTGGCGGATGGTTTTGG+AGG | + | chr8.3:48853071-48853090 | MS.gene32271:intron | 50.0% |
| AAGCTGAAGAGCCCATTGCC+CGG | - | chr8.3:48852153-48852172 | None:intergenic | 55.0% | |
| AAGGTTGTGCGAGGTGGTAG+TGG | + | chr8.3:48852644-48852663 | MS.gene32271:intron | 55.0% | |
| AGGTTGTGCGAGGTGGTAGT+GGG | + | chr8.3:48852645-48852664 | MS.gene32271:intron | 55.0% | |
| CTCCACTCCAGTCTTACGAC+GGG | - | chr8.3:48853258-48853277 | None:intergenic | 55.0% | |
| GCACAGAGAACTTCTTGGCG+GGG | - | chr8.3:48855059-48855078 | None:intergenic | 55.0% | |
| GCCATTTCCTTGGGAACTGG+AGG | + | chr8.3:48852492-48852511 | MS.gene32271:intron | 55.0% | |
| GCCGTGTAGTGTGTATTCGC+AGG | + | chr8.3:48852891-48852910 | MS.gene32271:intron | 55.0% | |
| GGAACCGAGAGAGCTTTCAC+TGG | + | chr8.3:48853745-48853764 | MS.gene32271:CDS | 55.0% | |
| GTGAGTATGCGCAAGCGAAC+AGG | - | chr8.3:48854863-48854882 | None:intergenic | 55.0% | |
| GTGTGTTCCCGTCGTAAGAC+TGG | + | chr8.3:48853248-48853267 | MS.gene32271:intron | 55.0% | |
| TATGGGGGGCTGTGATGTTG+AGG | + | chr8.3:48852581-48852600 | MS.gene32271:intron | 55.0% | |
| TTCCCGTCGTAAGACTGGAG+TGG | + | chr8.3:48853253-48853272 | MS.gene32271:intron | 55.0% | |
| !! | GAGGTGGTAGTGGGTTGCTT+GGG | + | chr8.3:48852654-48852673 | MS.gene32271:intron | 55.0% |
| !! | TTGCTGGCTTTGTGGAGTGG+AGG | + | chr8.3:48852719-48852738 | MS.gene32271:intron | 55.0% |
| GGGGGCTGTGATGTTGAGGA+AGG | + | chr8.3:48852585-48852604 | MS.gene32271:intron | 60.0% | |
| !! | CGAGGTGGTAGTGGGTTGCT+TGG | + | chr8.3:48852653-48852672 | MS.gene32271:intron | 60.0% |
| GTATTCGCAGGGTGGGCAGC+AGG | + | chr8.3:48852903-48852922 | MS.gene32271:intron | 65.0% | |
| ! | GATGATGGCCCTCCACCCAC+AGG | + | chr8.3:48855110-48855129 | MS.gene32271:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 48852010 | 48855273 | 48852010 | ID=MS.gene32271 |
| chr8.3 | mRNA | 48852010 | 48855273 | 48852010 | ID=MS.gene32271.t1;Parent=MS.gene32271 |
| chr8.3 | exon | 48852010 | 48852214 | 48852010 | ID=MS.gene32271.t1.exon1;Parent=MS.gene32271.t1 |
| chr8.3 | CDS | 48852010 | 48852214 | 48852010 | ID=cds.MS.gene32271.t1;Parent=MS.gene32271.t1 |
| chr8.3 | exon | 48853656 | 48853767 | 48853656 | ID=MS.gene32271.t1.exon2;Parent=MS.gene32271.t1 |
| chr8.3 | CDS | 48853656 | 48853767 | 48853656 | ID=cds.MS.gene32271.t1;Parent=MS.gene32271.t1 |
| chr8.3 | exon | 48854763 | 48854828 | 48854763 | ID=MS.gene32271.t1.exon3;Parent=MS.gene32271.t1 |
| chr8.3 | CDS | 48854763 | 48854828 | 48854763 | ID=cds.MS.gene32271.t1;Parent=MS.gene32271.t1 |
| chr8.3 | exon | 48854956 | 48855153 | 48854956 | ID=MS.gene32271.t1.exon4;Parent=MS.gene32271.t1 |
| chr8.3 | CDS | 48854956 | 48855153 | 48854956 | ID=cds.MS.gene32271.t1;Parent=MS.gene32271.t1 |
| chr8.3 | exon | 48855243 | 48855273 | 48855243 | ID=MS.gene32271.t1.exon5;Parent=MS.gene32271.t1 |
| chr8.3 | CDS | 48855243 | 48855273 | 48855243 | ID=cds.MS.gene32271.t1;Parent=MS.gene32271.t1 |
| Gene Sequence |
| Protein sequence |
