Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38600.t1 | XP_003602847.1 | 84.7 | 295 | 37 | 5 | 1 | 292 | 1 | 290 | 6.00E-127 | 463.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38600.t1 | Q08935 | 31.1 | 180 | 113 | 4 | 92 | 262 | 88 | 265 | 1.0e-18 | 95.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38600.t1 | G7J4G2 | 84.7 | 295 | 37 | 5 | 1 | 292 | 1 | 290 | 4.3e-127 | 463.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene38600 | 0.808209 | 3.47E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene38600 | 0.802529 | 5.37E-49 | -1.69E-46 |
| MS.gene049284 | MS.gene38600 | 0.820695 | 5.99E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene38600 | 0.857681 | 1.38E-62 | -1.69E-46 |
| MS.gene049427 | MS.gene38600 | 0.861985 | 6.98E-64 | -1.69E-46 |
| MS.gene049491 | MS.gene38600 | 0.844044 | 9.65E-59 | -1.69E-46 |
| MS.gene049614 | MS.gene38600 | 0.866782 | 2.22E-65 | -1.69E-46 |
| MS.gene049661 | MS.gene38600 | 0.856488 | 3.11E-62 | -1.69E-46 |
| MS.gene049662 | MS.gene38600 | 0.853759 | 1.93E-61 | -1.69E-46 |
| MS.gene049758 | MS.gene38600 | 0.812907 | 3.35E-51 | -1.69E-46 |
| MS.gene049760 | MS.gene38600 | 0.834923 | 2.26E-56 | -1.69E-46 |
| MS.gene050076 | MS.gene38600 | 0.902172 | 1.27E-78 | -1.69E-46 |
| MS.gene050099 | MS.gene38600 | 0.812535 | 4.04E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene38600 | 0.801571 | 8.45E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene38600 | 0.865825 | 4.46E-65 | -1.69E-46 |
| MS.gene050397 | MS.gene38600 | 0.828977 | 6.66E-55 | -1.69E-46 |
| MS.gene050404 | MS.gene38600 | 0.803376 | 3.59E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene38600 | 0.851238 | 1.01E-60 | -1.69E-46 |
| MS.gene050529 | MS.gene38600 | 0.827593 | 1.44E-54 | -1.69E-46 |
| MS.gene05053 | MS.gene38600 | 0.828327 | 9.56E-55 | -1.69E-46 |
| MS.gene050767 | MS.gene38600 | 0.90701 | 8.03E-81 | -1.69E-46 |
| MS.gene050770 | MS.gene38600 | 0.90914 | 7.91E-82 | -1.69E-46 |
| MS.gene050783 | MS.gene38600 | 0.860492 | 1.99E-63 | -1.69E-46 |
| MS.gene050812 | MS.gene38600 | 0.806744 | 7.09E-50 | -1.69E-46 |
| MS.gene05100 | MS.gene38600 | 0.8309 | 2.26E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene38600 | 0.90147 | 2.60E-78 | -1.69E-46 |
| MS.gene05105 | MS.gene38600 | 0.801116 | 1.05E-48 | -1.69E-46 |
| MS.gene051228 | MS.gene38600 | 0.813357 | 2.67E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene38600 | 0.807028 | 6.17E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene38600 | 0.872561 | 2.89E-67 | -1.69E-46 |
| MS.gene051666 | MS.gene38600 | 0.831326 | 1.78E-55 | -1.69E-46 |
| MS.gene051694 | MS.gene38600 | 0.803914 | 2.78E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene38600 | 0.808782 | 2.62E-50 | -1.69E-46 |
| MS.gene051877 | MS.gene38600 | 0.843825 | 1.10E-58 | -1.69E-46 |
| MS.gene052078 | MS.gene38600 | 0.885935 | 5.29E-72 | -1.69E-46 |
| MS.gene052271 | MS.gene38600 | 0.835372 | 1.74E-56 | -1.69E-46 |
| MS.gene052290 | MS.gene38600 | 0.891059 | 5.61E-74 | -1.69E-46 |
| MS.gene052310 | MS.gene38600 | 0.860566 | 1.89E-63 | -1.69E-46 |
| MS.gene052322 | MS.gene38600 | 0.8202 | 7.78E-53 | -1.69E-46 |
| MS.gene052326 | MS.gene38600 | 0.902819 | 6.56E-79 | -1.69E-46 |
| MS.gene052379 | MS.gene38600 | 0.843261 | 1.56E-58 | -1.69E-46 |
| MS.gene053009 | MS.gene38600 | 0.828006 | 1.14E-54 | -1.69E-46 |
| MS.gene053103 | MS.gene38600 | 0.850141 | 2.06E-60 | -1.69E-46 |
| MS.gene053104 | MS.gene38600 | 0.83987 | 1.22E-57 | -1.69E-46 |
| MS.gene053107 | MS.gene38600 | 0.825077 | 5.71E-54 | -1.69E-46 |
| MS.gene053322 | MS.gene38600 | 0.904135 | 1.68E-79 | -1.69E-46 |
| MS.gene053836 | MS.gene38600 | 0.812254 | 4.65E-51 | -1.69E-46 |
| MS.gene053971 | MS.gene38600 | 0.808513 | 2.99E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene38600 | 0.847763 | 9.41E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene38600 | 0.908043 | 2.63E-81 | -1.69E-46 |
| MS.gene05455 | MS.gene38600 | 0.862534 | 4.73E-64 | -1.69E-46 |
| MS.gene054802 | MS.gene38600 | 0.935071 | 1.51E-96 | -1.69E-46 |
| MS.gene054803 | MS.gene38600 | 0.934176 | 6.06E-96 | -1.69E-46 |
| MS.gene054804 | MS.gene38600 | 0.935045 | 1.57E-96 | -1.69E-46 |
| MS.gene054955 | MS.gene38600 | 0.807507 | 4.89E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene38600 | 0.800948 | 1.13E-48 | -1.69E-46 |
| MS.gene055254 | MS.gene38600 | 0.886161 | 4.35E-72 | -1.69E-46 |
| MS.gene055277 | MS.gene38600 | 0.879362 | 1.33E-69 | -1.69E-46 |
| MS.gene055390 | MS.gene38600 | 0.853294 | 2.63E-61 | -1.69E-46 |
| MS.gene055397 | MS.gene38600 | 0.889663 | 1.98E-73 | -1.69E-46 |
| MS.gene055412 | MS.gene38600 | 0.82584 | 3.76E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene38600 | 0.865345 | 6.32E-65 | -1.69E-46 |
| MS.gene055428 | MS.gene38600 | 0.85871 | 6.83E-63 | -1.69E-46 |
| MS.gene055499 | MS.gene38600 | 0.905339 | 4.76E-80 | -1.69E-46 |
| MS.gene055647 | MS.gene38600 | 0.833045 | 6.68E-56 | -1.69E-46 |
| MS.gene055896 | MS.gene38600 | 0.866588 | 2.55E-65 | -1.69E-46 |
| MS.gene05592 | MS.gene38600 | 0.826984 | 2.01E-54 | -1.69E-46 |
| MS.gene055930 | MS.gene38600 | 0.819635 | 1.05E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene38600 | 0.806909 | 6.54E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene38600 | 0.812589 | 3.93E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene38600 | 0.832762 | 7.86E-56 | -1.69E-46 |
| MS.gene056410 | MS.gene38600 | 0.850693 | 1.44E-60 | -1.69E-46 |
| MS.gene056452 | MS.gene38600 | 0.848604 | 5.51E-60 | -1.69E-46 |
| MS.gene056609 | MS.gene38600 | 0.834902 | 2.29E-56 | -1.69E-46 |
| MS.gene056612 | MS.gene38600 | 0.832887 | 7.31E-56 | -1.69E-46 |
| MS.gene056796 | MS.gene38600 | 0.810302 | 1.23E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene38600 | 0.855769 | 5.05E-62 | -1.69E-46 |
| MS.gene05702 | MS.gene38600 | 0.839813 | 1.27E-57 | -1.69E-46 |
| MS.gene057123 | MS.gene38600 | 0.883621 | 3.84E-71 | -1.69E-46 |
| MS.gene057129 | MS.gene38600 | 0.890158 | 1.27E-73 | -1.69E-46 |
| MS.gene057146 | MS.gene38600 | 0.875968 | 2.03E-68 | -1.69E-46 |
| MS.gene057295 | MS.gene38600 | 0.867957 | 9.33E-66 | -1.69E-46 |
| MS.gene05733 | MS.gene38600 | 0.825033 | 5.84E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene38600 | 0.83362 | 4.80E-56 | -1.69E-46 |
| MS.gene058002 | MS.gene38600 | 0.81855 | 1.85E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene38600 | 0.831776 | 1.38E-55 | -1.69E-46 |
| MS.gene058082 | MS.gene38600 | 0.813393 | 2.62E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene38600 | 0.820159 | 7.95E-53 | -1.69E-46 |
| MS.gene058233 | MS.gene38600 | 0.845568 | 3.75E-59 | -1.69E-46 |
| MS.gene058293 | MS.gene38600 | 0.881428 | 2.42E-70 | -1.69E-46 |
| MS.gene058323 | MS.gene38600 | 0.817258 | 3.62E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene38600 | 0.921007 | 6.21E-88 | -1.69E-46 |
| MS.gene058787 | MS.gene38600 | 0.815481 | 9.04E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene38600 | 0.805521 | 1.28E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene38600 | 0.835943 | 1.25E-56 | -1.69E-46 |
| MS.gene059326 | MS.gene38600 | 0.856746 | 2.61E-62 | -1.69E-46 |
| MS.gene05934 | MS.gene38600 | 0.809233 | 2.09E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene38600 | 0.828037 | 1.12E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene38600 | 0.880582 | 4.87E-70 | -1.69E-46 |
| MS.gene059597 | MS.gene38600 | 0.87037 | 1.54E-66 | -1.69E-46 |
| MS.gene05959 | MS.gene38600 | 0.818411 | 1.99E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene38600 | 0.833986 | 3.89E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene38600 | 0.846088 | 2.70E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene38600 | 0.85496 | 8.69E-62 | -1.69E-46 |
| MS.gene059695 | MS.gene38600 | 0.856571 | 2.94E-62 | -1.69E-46 |
| MS.gene059708 | MS.gene38600 | 0.816022 | 6.85E-52 | -1.69E-46 |
| MS.gene059858 | MS.gene38600 | 0.820561 | 6.43E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene38600 | 0.83154 | 1.58E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene38600 | 0.814667 | 1.37E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene38600 | 0.92215 | 1.43E-88 | -1.69E-46 |
| MS.gene060005 | MS.gene38600 | 0.805652 | 1.20E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene38600 | 0.804919 | 1.71E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene38600 | 0.824216 | 9.10E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene38600 | 0.853795 | 1.89E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene38600 | 0.830144 | 3.46E-55 | -1.69E-46 |
| MS.gene06090 | MS.gene38600 | 0.844263 | 8.42E-59 | -1.69E-46 |
| MS.gene061041 | MS.gene38600 | 0.829958 | 3.85E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene38600 | 0.837847 | 4.08E-57 | -1.69E-46 |
| MS.gene061051 | MS.gene38600 | -0.817901 | 2.59E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene38600 | 0.908102 | 2.47E-81 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63514 | MS.gene38600 | PPI |
| MS.gene56256 | MS.gene38600 | PPI |
| MS.gene51627 | MS.gene38600 | PPI |
| MS.gene009458 | MS.gene38600 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38600.t1 | MTR_3g099590 | 88.136 | 295 | 27 | 5 | 1 | 292 | 1 | 290 | 5.93e-180 | 497 |
| MS.gene38600.t1 | MTR_5g030020 | 34.759 | 187 | 116 | 2 | 93 | 277 | 98 | 280 | 1.37e-26 | 106 |
| MS.gene38600.t1 | MTR_4g104470 | 33.333 | 183 | 107 | 7 | 82 | 258 | 116 | 289 | 1.13e-25 | 103 |
| MS.gene38600.t1 | MTR_1g045510 | 36.872 | 179 | 100 | 7 | 91 | 263 | 113 | 284 | 2.58e-25 | 102 |
| MS.gene38600.t1 | MTR_3g075500 | 33.714 | 175 | 105 | 6 | 92 | 259 | 110 | 280 | 3.80e-24 | 99.4 |
| MS.gene38600.t1 | MTR_3g075500 | 33.333 | 165 | 99 | 6 | 92 | 249 | 110 | 270 | 2.59e-21 | 91.3 |
| MS.gene38600.t1 | MTR_7g106440 | 28.704 | 216 | 132 | 7 | 56 | 258 | 79 | 285 | 5.57e-21 | 91.3 |
| MS.gene38600.t1 | MTR_1g056520 | 29.189 | 185 | 118 | 5 | 83 | 258 | 100 | 280 | 2.21e-20 | 89.4 |
| MS.gene38600.t1 | MTR_3g027140 | 30.252 | 238 | 136 | 10 | 38 | 258 | 8 | 232 | 8.00e-18 | 80.9 |
| MS.gene38600.t1 | MTR_1g064230 | 28.287 | 251 | 144 | 8 | 34 | 261 | 35 | 272 | 2.32e-16 | 77.8 |
| MS.gene38600.t1 | MTR_1g061870 | 28.161 | 174 | 117 | 5 | 91 | 258 | 194 | 365 | 9.19e-15 | 74.7 |
| MS.gene38600.t1 | MTR_1g061870 | 27.011 | 174 | 123 | 3 | 93 | 266 | 105 | 274 | 3.37e-12 | 67.0 |
| MS.gene38600.t1 | MTR_7g094660 | 28.108 | 185 | 122 | 5 | 93 | 269 | 643 | 824 | 1.08e-14 | 74.7 |
| MS.gene38600.t1 | MTR_7g102730 | 26.230 | 183 | 123 | 5 | 91 | 263 | 189 | 369 | 5.47e-14 | 72.4 |
| MS.gene38600.t1 | MTR_1g097440 | 28.804 | 184 | 118 | 5 | 91 | 263 | 209 | 390 | 4.46e-13 | 69.7 |
| MS.gene38600.t1 | MTR_6g040190 | 28.261 | 184 | 119 | 5 | 91 | 263 | 200 | 381 | 1.27e-12 | 68.2 |
| MS.gene38600.t1 | MTR_5g097580 | 26.380 | 163 | 108 | 5 | 90 | 243 | 5 | 164 | 4.10e-12 | 66.6 |
| MS.gene38600.t1 | MTR_5g097580 | 26.380 | 163 | 108 | 5 | 90 | 243 | 5 | 164 | 4.17e-12 | 66.6 |
| MS.gene38600.t1 | MTR_4g122650 | 29.012 | 162 | 103 | 7 | 91 | 248 | 88 | 241 | 1.62e-11 | 65.1 |
| MS.gene38600.t1 | MTR_7g013730 | 34.444 | 90 | 55 | 2 | 88 | 176 | 37 | 123 | 2.09e-11 | 63.2 |
| MS.gene38600.t1 | MTR_1g019150 | 27.869 | 183 | 111 | 4 | 96 | 263 | 216 | 392 | 2.45e-11 | 64.3 |
| MS.gene38600.t1 | MTR_2g026180 | 25.153 | 163 | 108 | 5 | 92 | 243 | 5 | 164 | 2.47e-11 | 64.3 |
| MS.gene38600.t1 | MTR_6g477870 | 36.585 | 82 | 51 | 1 | 91 | 171 | 95 | 176 | 9.05e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38600.t1 | AT4G09040 | 63.043 | 184 | 66 | 2 | 86 | 267 | 89 | 272 | 1.38e-78 | 241 |
| MS.gene38600.t1 | AT4G09040 | 62.637 | 182 | 66 | 2 | 88 | 267 | 31 | 212 | 6.74e-78 | 237 |
| MS.gene38600.t1 | AT2G35410 | 33.054 | 239 | 144 | 3 | 34 | 256 | 28 | 266 | 1.02e-37 | 135 |
| MS.gene38600.t1 | AT1G60000 | 30.645 | 248 | 141 | 9 | 35 | 264 | 24 | 258 | 2.48e-23 | 96.7 |
| MS.gene38600.t1 | AT3G52380 | 32.105 | 190 | 113 | 7 | 80 | 258 | 108 | 292 | 5.98e-23 | 97.1 |
| MS.gene38600.t1 | AT5G50250 | 32.948 | 173 | 104 | 6 | 92 | 258 | 114 | 280 | 6.49e-23 | 95.9 |
| MS.gene38600.t1 | AT4G24770 | 32.184 | 174 | 106 | 6 | 91 | 258 | 150 | 317 | 3.51e-22 | 94.7 |
| MS.gene38600.t1 | AT4G24770 | 32.184 | 174 | 106 | 6 | 91 | 258 | 150 | 317 | 3.51e-22 | 94.7 |
| MS.gene38600.t1 | AT2G37220 | 31.053 | 190 | 106 | 5 | 92 | 259 | 92 | 278 | 1.51e-18 | 84.0 |
| MS.gene38600.t1 | AT3G16380 | 30.055 | 183 | 117 | 4 | 90 | 263 | 201 | 381 | 2.10e-15 | 76.6 |
| MS.gene38600.t1 | AT4G34110 | 29.508 | 183 | 117 | 4 | 91 | 263 | 215 | 395 | 4.41e-15 | 75.9 |
| MS.gene38600.t1 | AT2G36660 | 27.322 | 183 | 121 | 5 | 91 | 263 | 201 | 381 | 1.14e-14 | 74.3 |
| MS.gene38600.t1 | AT2G36660 | 26.901 | 171 | 119 | 4 | 93 | 263 | 114 | 278 | 1.70e-11 | 65.1 |
| MS.gene38600.t1 | AT3G52150 | 30.114 | 176 | 112 | 5 | 92 | 258 | 77 | 250 | 6.97e-13 | 67.4 |
| MS.gene38600.t1 | AT3G52150 | 30.114 | 176 | 112 | 5 | 92 | 258 | 77 | 250 | 6.97e-13 | 67.4 |
| MS.gene38600.t1 | AT1G01080 | 26.601 | 203 | 128 | 5 | 71 | 258 | 88 | 284 | 1.21e-12 | 67.4 |
| MS.gene38600.t1 | AT1G01080 | 26.471 | 204 | 128 | 5 | 71 | 258 | 88 | 285 | 1.47e-12 | 67.0 |
| MS.gene38600.t1 | AT2G23350 | 27.041 | 196 | 123 | 4 | 82 | 263 | 216 | 405 | 2.69e-12 | 67.4 |
| MS.gene38600.t1 | AT1G71770 | 28.108 | 185 | 121 | 4 | 89 | 263 | 237 | 419 | 5.03e-12 | 66.6 |
| MS.gene38600.t1 | AT1G71770 | 28.108 | 185 | 121 | 4 | 89 | 263 | 237 | 419 | 5.03e-12 | 66.6 |
| MS.gene38600.t1 | AT1G22760 | 28.866 | 194 | 122 | 7 | 82 | 263 | 220 | 409 | 1.62e-11 | 65.1 |
| MS.gene38600.t1 | AT1G01080 | 26.425 | 193 | 121 | 5 | 71 | 248 | 88 | 274 | 2.28e-11 | 63.5 |
| MS.gene38600.t1 | AT5G41690 | 30.601 | 183 | 96 | 6 | 93 | 250 | 70 | 246 | 6.62e-11 | 63.2 |
| MS.gene38600.t1 | AT5G41690 | 30.601 | 183 | 96 | 6 | 93 | 250 | 70 | 246 | 6.62e-11 | 63.2 |
| MS.gene38600.t1 | AT5G41690 | 30.601 | 183 | 96 | 6 | 93 | 250 | 70 | 246 | 6.62e-11 | 63.2 |
| MS.gene38600.t1 | AT4G19610 | 29.843 | 191 | 119 | 9 | 78 | 256 | 585 | 772 | 7.87e-11 | 63.2 |
| MS.gene38600.t1 | AT5G55550 | 24.096 | 166 | 108 | 5 | 92 | 243 | 7 | 168 | 8.11e-11 | 62.8 |
| MS.gene38600.t1 | AT5G55550 | 24.096 | 166 | 108 | 5 | 92 | 243 | 7 | 168 | 8.11e-11 | 62.8 |
| MS.gene38600.t1 | AT5G55550 | 24.096 | 166 | 108 | 5 | 92 | 243 | 7 | 168 | 8.11e-11 | 62.8 |
| MS.gene38600.t1 | AT5G55550 | 24.096 | 166 | 108 | 5 | 92 | 243 | 7 | 168 | 8.11e-11 | 62.8 |
Find 66 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAACAAGTTATATGTTAT+TGG | 0.178438 | 3.3:+82021058 | None:intergenic |
| GGGTTTAGCGTTTGTGGAAA+TGG | 0.293091 | 3.3:-82021934 | MS.gene38600:CDS |
| CAAATATGCTAAGCCTAAAA+AGG | 0.298308 | 3.3:-82021110 | MS.gene38600:CDS |
| TTTGTTCCTCGGTGGTTACT+TGG | 0.304393 | 3.3:+82022209 | None:intergenic |
| GTTGTTTGGTTGTGATAATA+AGG | 0.306984 | 3.3:+82022278 | None:intergenic |
| ATGGATAAACGAAGAGAATA+AGG | 0.330328 | 3.3:+82022322 | None:intergenic |
| TGTATAATAAGAACAGAAAC+AGG | 0.337196 | 3.3:-82021956 | MS.gene38600:CDS |
| TGGTTGTGATAATAAGGGTT+GGG | 0.352995 | 3.3:+82022284 | None:intergenic |
| AGAGCTGCAGAAGCTTCTTC+AGG | 0.366986 | 3.3:+82021906 | None:intergenic |
| AGCTTCTTTCTTAGACTTGA+AGG | 0.386679 | 3.3:+82020904 | None:intergenic |
| CCTAGACGGCCATCTGGTTA+TGG | 0.388895 | 3.3:-82020935 | MS.gene38600:CDS |
| TAGTAAGCGGTTTGTTCAAC+TGG | 0.391185 | 3.3:-82020664 | MS.gene38600:CDS |
| CAAACATTTCTTATGAAGTA+AGG | 0.396454 | 3.3:-82021033 | MS.gene38600:CDS |
| AAACAGGGGTTTAGCGTTTG+TGG | 0.413290 | 3.3:-82021940 | MS.gene38600:CDS |
| GGTTTAGCGTTTGTGGAAAT+GGG | 0.418798 | 3.3:-82021933 | MS.gene38600:CDS |
| AGTTGAACAAACCGCTTACT+AGG | 0.422121 | 3.3:+82020666 | None:intergenic |
| CCATAACCAGATGGCCGTCT+AGG | 0.428089 | 3.3:+82020935 | None:intergenic |
| GAAGCTCTTGCCGAGTTTGA+AGG | 0.428323 | 3.3:-82020878 | MS.gene38600:CDS |
| AGAATAAGAAGAGTGTTGTT+TGG | 0.434227 | 3.3:+82022264 | None:intergenic |
| TTACTAGGTGCCACCCTTAG+TGG | 0.434877 | 3.3:+82020681 | None:intergenic |
| ATTGGCTTCCGTTCCACTGA+TGG | 0.442268 | 3.3:+82021076 | None:intergenic |
| GAACTCTTCGGTTTGTTCCT+CGG | 0.445669 | 3.3:+82022198 | None:intergenic |
| GGTGGTTACTTGGGTTTGTT+CGG | 0.446564 | 3.3:+82022219 | None:intergenic |
| ACGAAGAGAATAAGGATTGA+GGG | 0.446924 | 3.3:+82022330 | None:intergenic |
| GGTTGTGATAATAAGGGTTG+GGG | 0.447801 | 3.3:+82022285 | None:intergenic |
| AATGCTGCGTAGGAGTTTGA+CGG | 0.476117 | 3.3:-82021148 | MS.gene38600:intron |
| TTGTTTGGTTGTGATAATAA+GGG | 0.487486 | 3.3:+82022279 | None:intergenic |
| TTGGTTGTGATAATAAGGGT+TGG | 0.494016 | 3.3:+82022283 | None:intergenic |
| AACGAAGAGAATAAGGATTG+AGG | 0.498160 | 3.3:+82022329 | None:intergenic |
| GAGAACCCTAGACGGCCATC+TGG | 0.499676 | 3.3:-82020941 | MS.gene38600:CDS |
| CAACTGGCGGAGGAGAGTGC+AGG | 0.500053 | 3.3:-82020648 | MS.gene38600:CDS |
| TGGAAAAGTCCTTGATGTTG+AGG | 0.503374 | 3.3:-82022098 | MS.gene38600:intron |
| CTTGTCAAAGTCGAAAGAGT+TGG | 0.505319 | 3.3:+82022366 | None:intergenic |
| TTGTTCCTCGGTGGTTACTT+GGG | 0.517713 | 3.3:+82022210 | None:intergenic |
| CATAACCAGATGGCCGTCTA+GGG | 0.521702 | 3.3:+82020936 | None:intergenic |
| AAGAGTTGGTTATTATTACA+TGG | 0.525296 | 3.3:+82022380 | None:intergenic |
| TTTGTGGAAGATAATTGAGT+TGG | 0.527851 | 3.3:+82022406 | None:intergenic |
| TTGGGTTTGTTCGGAAGTAG+AGG | 0.540338 | 3.3:+82022228 | None:intergenic |
| CGAGCTTACATACATACGAT+TGG | 0.548131 | 3.3:+82021874 | None:intergenic |
| TCTTGCCGAGTTTGAAGGAA+AGG | 0.556428 | 3.3:-82020873 | MS.gene38600:intron |
| TGGTAAAGTTGTTTCTGCAG+AGG | 0.561558 | 3.3:-82020975 | MS.gene38600:CDS |
| CCGAAGAGTTCTCTACTACC+AGG | 0.563866 | 3.3:-82022186 | MS.gene38600:CDS |
| TGGGGTATGAGTATGAGTAA+TGG | 0.566390 | 3.3:+82022303 | None:intergenic |
| AGTTACCTTTCCTTCAAACT+CGG | 0.570688 | 3.3:+82020868 | None:intergenic |
| GCGGTTTGTTCAACTGGCGG+AGG | 0.574915 | 3.3:-82020658 | MS.gene38600:CDS |
| GGAGAAAATACGGCCATCAG+TGG | 0.578295 | 3.3:-82021089 | MS.gene38600:CDS |
| CCTGGTAGTAGAGAACTCTT+CGG | 0.586085 | 3.3:+82022186 | None:intergenic |
| AGTAAGGTCTAAAGACCTCA+AGG | 0.590952 | 3.3:-82021017 | MS.gene38600:CDS |
| TATGGGAAGGCCACTAAGGG+TGG | 0.592174 | 3.3:-82020691 | MS.gene38600:CDS |
| AACATTCTGAGCAAGTAACC+TGG | 0.593923 | 3.3:+82022168 | None:intergenic |
| CATATTTGATATTTATTACG+CGG | 0.594638 | 3.3:+82021125 | None:intergenic |
| AACTGGCGGAGGAGAGTGCA+GGG | 0.612225 | 3.3:-82020647 | MS.gene38600:CDS |
| TACTTGCTCAGAATGTTCCA+TGG | 0.612581 | 3.3:-82022162 | MS.gene38600:CDS |
| CTCTTCGGTTTGTTCCTCGG+TGG | 0.623297 | 3.3:+82022201 | None:intergenic |
| CAAAGAACGAATATCTTCAG+TGG | 0.626913 | 3.3:+82022132 | None:intergenic |
| TAAGCGGTTTGTTCAACTGG+CGG | 0.631391 | 3.3:-82020661 | MS.gene38600:CDS |
| AAATACGGCCATCAGTGGAA+CGG | 0.640291 | 3.3:-82021084 | MS.gene38600:CDS |
| TTCTGAGTTGAGCGTCAATG+AGG | 0.642846 | 3.3:-82020610 | MS.gene38600:CDS |
| TCTTCAGTGGTACTTGACCA+TGG | 0.649901 | 3.3:+82022145 | None:intergenic |
| GACACAAATCCATAACCAGA+TGG | 0.653420 | 3.3:+82020926 | None:intergenic |
| TCTTTCATGAGAACCCTAGA+CGG | 0.656239 | 3.3:-82020949 | MS.gene38600:CDS |
| TATAATAAGAACAGAAACAG+GGG | 0.661478 | 3.3:-82021954 | MS.gene38600:CDS |
| GTATAATAAGAACAGAAACA+GGG | 0.680373 | 3.3:-82021955 | MS.gene38600:CDS |
| TAAGGGTGGCACCTAGTAAG+CGG | 0.686102 | 3.3:-82020677 | MS.gene38600:CDS |
| GAAGATAATTGAGTTGGACA+TGG | 0.691814 | 3.3:+82022412 | None:intergenic |
| ACAAACCCAAGTAACCACCG+AGG | 0.809424 | 3.3:-82022215 | MS.gene38600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAGAAAATAGTTATTATT+AGG | - | chr3.3:82021557-82021576 | MS.gene38600:intron | 15.0% |
| !!! | TTTTTTGTTTGTTTTTGTTT+TGG | - | chr3.3:82021025-82021044 | MS.gene38600:CDS | 15.0% |
| !! | ACAAACAAGTTATATGTTAT+TGG | + | chr3.3:82021971-82021990 | None:intergenic | 20.0% |
| !! | AGATAATTATCTTAGTTACT+TGG | + | chr3.3:82021646-82021665 | None:intergenic | 20.0% |
| !! | AGTTATTATTAGGTGAAAAT+TGG | - | chr3.3:82021567-82021586 | MS.gene38600:intron | 20.0% |
| !! | ATTATTTAGTATTGTGACAT+TGG | - | chr3.3:82022287-82022306 | MS.gene38600:CDS | 20.0% |
| !! | CATATTTGATATTTATTACG+CGG | + | chr3.3:82021904-82021923 | None:intergenic | 20.0% |
| !! | CCAAATTCAAATTAACAAAT+TGG | + | chr3.3:82022198-82022217 | None:intergenic | 20.0% |
| !! | TATTATGTTCAATTCATTTC+AGG | - | chr3.3:82020973-82020992 | MS.gene38600:CDS | 20.0% |
| !!! | ATATTTCTGCAGAATTTTAT+GGG | - | chr3.3:82022318-82022337 | MS.gene38600:CDS | 20.0% |
| !!! | CCAATTTGTTAATTTGAATT+TGG | - | chr3.3:82022195-82022214 | MS.gene38600:CDS | 20.0% |
| ! | CAAACATTTCTTATGAAGTA+AGG | - | chr3.3:82021993-82022012 | MS.gene38600:intron | 25.0% |
| ! | CAGATAAACACATCAAATTA+AGG | + | chr3.3:82021847-82021866 | None:intergenic | 25.0% |
| ! | GAATATGATACAATTAGAGT+AGG | - | chr3.3:82021605-82021624 | MS.gene38600:intron | 25.0% |
| ! | GTATAATAAGAACAGAAACA+GGG | - | chr3.3:82021071-82021090 | MS.gene38600:CDS | 25.0% |
| ! | TATAATAAGAACAGAAACAG+GGG | - | chr3.3:82021072-82021091 | MS.gene38600:CDS | 25.0% |
| ! | TGTATAATAAGAACAGAAAC+AGG | - | chr3.3:82021070-82021089 | MS.gene38600:CDS | 25.0% |
| ! | TGTTAGATATAGTTACTAGT+TGG | + | chr3.3:82021703-82021722 | None:intergenic | 25.0% |
| ! | TTGTTTGGTTGTGATAATAA+GGG | + | chr3.3:82020750-82020769 | None:intergenic | 25.0% |
| !! | AACGTGTGAATTTTATAGAT+AGG | - | chr3.3:82021240-82021259 | MS.gene38600:intron | 25.0% |
| !! | AAGAGTTGGTTATTATTACA+TGG | + | chr3.3:82020649-82020668 | None:intergenic | 25.0% |
| !! | ACGTGTGAATTTTATAGATA+GGG | - | chr3.3:82021241-82021260 | MS.gene38600:intron | 25.0% |
| !! | CGTTCTTTGTTTGAAAAATA+TGG | - | chr3.3:82020908-82020927 | MS.gene38600:CDS | 25.0% |
| !! | GATTTGATAGAATTGGTTTA+AGG | - | chr3.3:82021532-82021551 | MS.gene38600:intron | 25.0% |
| !! | GTAATTTTCTATGTCAAACT+CGG | - | chr3.3:82021490-82021509 | MS.gene38600:intron | 25.0% |
| !! | TATTATTACATGGTGTTTTG+TGG | + | chr3.3:82020639-82020658 | None:intergenic | 25.0% |
| !!! | AAATTTTAACCGCAATTTCT+TGG | - | chr3.3:82022248-82022267 | MS.gene38600:CDS | 25.0% |
| !!! | GATATTTCTGCAGAATTTTA+TGG | - | chr3.3:82022317-82022336 | MS.gene38600:CDS | 25.0% |
| !!! | GATTTGTTAGAAATGGTTTA+CGG | + | chr3.3:82021679-82021698 | None:intergenic | 25.0% |
| ACAAGACAAAAATCGAAAAG+AGG | + | chr3.3:82021192-82021211 | None:intergenic | 30.0% | |
| ACAGAGAGATTTGATAGAAT+TGG | - | chr3.3:82021525-82021544 | MS.gene38600:intron | 30.0% | |
| AGCCTAAAAAGGAGAAAATA+CGG | - | chr3.3:82021927-82021946 | MS.gene38600:CDS | 30.0% | |
| ATCAACAATGTTGTAACTTG+CGG | + | chr3.3:82021460-82021479 | None:intergenic | 30.0% | |
| ATGGATAAACGAAGAGAATA+AGG | + | chr3.3:82020707-82020726 | None:intergenic | 30.0% | |
| ATTGAAAGCTTAAACCCAAA+AGG | + | chr3.3:82021051-82021070 | None:intergenic | 30.0% | |
| CAAATATGCTAAGCCTAAAA+AGG | - | chr3.3:82021916-82021935 | MS.gene38600:CDS | 30.0% | |
| CAAGACAAAAATCGAAAAGA+GGG | + | chr3.3:82021191-82021210 | None:intergenic | 30.0% | |
| CTTAGTTACTTGGATTATGA+AGG | + | chr3.3:82021636-82021655 | None:intergenic | 30.0% | |
| GATAAAAAACCTCAACATCA+AGG | + | chr3.3:82020940-82020959 | None:intergenic | 30.0% | |
| GTTGTTTGGTTGTGATAATA+AGG | + | chr3.3:82020751-82020770 | None:intergenic | 30.0% | |
| TTTGTGGAAGATAATTGAGT+TGG | + | chr3.3:82020623-82020642 | None:intergenic | 30.0% | |
| ! | TGAAATTTTCACACCCATTA+GGG | - | chr3.3:82021732-82021751 | MS.gene38600:intron | 30.0% |
| ! | TTGATAGAATTGGTTTAAGG+TGG | - | chr3.3:82021535-82021554 | MS.gene38600:intron | 30.0% |
| ! | TTTTTATGTGTCTTCTGTTG+TGG | - | chr3.3:82021794-82021813 | MS.gene38600:intron | 30.0% |
| !! | AATCGTTGTTATTTCGCAAT+TGG | - | chr3.3:82021355-82021374 | MS.gene38600:intron | 30.0% |
| !! | AGAATAAGAAGAGTGTTGTT+TGG | + | chr3.3:82020765-82020784 | None:intergenic | 30.0% |
| !! | AGTTGGAGATTTGTTAGAAA+TGG | + | chr3.3:82021686-82021705 | None:intergenic | 30.0% |
| !!! | TGTTTTTGTTTTGGCCTTTT+GGG | - | chr3.3:82021034-82021053 | MS.gene38600:CDS | 30.0% |
| !!! | TTGTTTTTGTTTTGGCCTTT+TGG | - | chr3.3:82021033-82021052 | MS.gene38600:CDS | 30.0% |
| AACGAAGAGAATAAGGATTG+AGG | + | chr3.3:82020700-82020719 | None:intergenic | 35.0% | |
| ACGAAGAGAATAAGGATTGA+GGG | + | chr3.3:82020699-82020718 | None:intergenic | 35.0% | |
| AGCTTCTTTCTTAGACTTGA+AGG | + | chr3.3:82022125-82022144 | None:intergenic | 35.0% | |
| AGTTACCTTTCCTTCAAACT+CGG | + | chr3.3:82022161-82022180 | None:intergenic | 35.0% | |
| CAAAGAACGAATATCTTCAG+TGG | + | chr3.3:82020897-82020916 | None:intergenic | 35.0% | |
| CTTCTGTTGTGGAATTTACT+TGG | - | chr3.3:82021805-82021824 | MS.gene38600:intron | 35.0% | |
| GGAATTTACTTGGCATCTAT+AGG | - | chr3.3:82021815-82021834 | MS.gene38600:intron | 35.0% | |
| GTGTTATCTTATCCCCTAAT+GGG | + | chr3.3:82021748-82021767 | None:intergenic | 35.0% | |
| TATAGCACACTATAGCATAG+CGG | - | chr3.3:82021419-82021438 | MS.gene38600:intron | 35.0% | |
| TGGTTGTGATAATAAGGGTT+GGG | + | chr3.3:82020745-82020764 | None:intergenic | 35.0% | |
| TGTGTTATCTTATCCCCTAA+TGG | + | chr3.3:82021749-82021768 | None:intergenic | 35.0% | |
| TTACTTGGCATCTATAGGAA+GGG | - | chr3.3:82021820-82021839 | MS.gene38600:intron | 35.0% | |
| TTGGTTGTGATAATAAGGGT+TGG | + | chr3.3:82020746-82020765 | None:intergenic | 35.0% | |
| TTTACTTGGCATCTATAGGA+AGG | - | chr3.3:82021819-82021838 | MS.gene38600:intron | 35.0% | |
| ! | CTGAAATTTTCACACCCATT+AGG | - | chr3.3:82021731-82021750 | MS.gene38600:intron | 35.0% |
| ! | GAAATTTTCACACCCATTAG+GGG | - | chr3.3:82021733-82021752 | MS.gene38600:intron | 35.0% |
| ! | GCAACTGCTATTTGACAAAA+CGG | + | chr3.3:82021318-82021337 | None:intergenic | 35.0% |
| ! | TTCTGCAGAATTTTATGGGA+AGG | - | chr3.3:82022322-82022341 | MS.gene38600:CDS | 35.0% |
| !! | GAAGATAATTGAGTTGGACA+TGG | + | chr3.3:82020617-82020636 | None:intergenic | 35.0% |
| !!! | CCTCAAGGAGTTTTTTGATT+CGG | - | chr3.3:82022024-82022043 | MS.gene38600:intron | 35.0% |
| !!! | CTCAAGGAGTTTTTTGATTC+GGG | - | chr3.3:82022025-82022044 | MS.gene38600:intron | 35.0% |
| AACATTCTGAGCAAGTAACC+TGG | + | chr3.3:82020861-82020880 | None:intergenic | 40.0% | |
| ACCGCAATTTCTTGGAGTTA+CGG | - | chr3.3:82022256-82022275 | MS.gene38600:CDS | 40.0% | |
| AGTAAGGTCTAAAGACCTCA+AGG | - | chr3.3:82022009-82022028 | MS.gene38600:intron | 40.0% | |
| AGTTGAACAAACCGCTTACT+AGG | + | chr3.3:82022363-82022382 | None:intergenic | 40.0% | |
| CCGAATCAAAAAACTCCTTG+AGG | + | chr3.3:82022027-82022046 | None:intergenic | 40.0% | |
| CGAGCTTACATACATACGAT+TGG | + | chr3.3:82021155-82021174 | None:intergenic | 40.0% | |
| CTTGTCAAAGTCGAAAGAGT+TGG | + | chr3.3:82020663-82020682 | None:intergenic | 40.0% | |
| GACACAAATCCATAACCAGA+TGG | + | chr3.3:82022103-82022122 | None:intergenic | 40.0% | |
| GGGTGTGAAAATTTCAGTGA+TGG | + | chr3.3:82021728-82021747 | None:intergenic | 40.0% | |
| GGTTGTGATAATAAGGGTTG+GGG | + | chr3.3:82020744-82020763 | None:intergenic | 40.0% | |
| GGTTTAGCGTTTGTGGAAAT+GGG | - | chr3.3:82021093-82021112 | MS.gene38600:CDS | 40.0% | |
| TACTTGCTCAGAATGTTCCA+TGG | - | chr3.3:82020864-82020883 | MS.gene38600:intron | 40.0% | |
| TCATTCTTTGAATGCTGCGT+AGG | - | chr3.3:82021868-82021887 | MS.gene38600:intron | 40.0% | |
| TCCGTAACTCCAAGAAATTG+CGG | + | chr3.3:82022260-82022279 | None:intergenic | 40.0% | |
| TCTTTCATGAGAACCCTAGA+CGG | - | chr3.3:82022077-82022096 | MS.gene38600:intron | 40.0% | |
| TGGAAAAGTCCTTGATGTTG+AGG | - | chr3.3:82020928-82020947 | MS.gene38600:CDS | 40.0% | |
| TGGGGTATGAGTATGAGTAA+TGG | + | chr3.3:82020726-82020745 | None:intergenic | 40.0% | |
| ! | ATTTTATGGGAAGGCCACTA+AGG | - | chr3.3:82022331-82022350 | MS.gene38600:CDS | 40.0% |
| ! | GGCCGTATTTTCTCCTTTTT+AGG | + | chr3.3:82021932-82021951 | None:intergenic | 40.0% |
| ! | TAGTAAGCGGTTTGTTCAAC+TGG | - | chr3.3:82022362-82022381 | MS.gene38600:CDS | 40.0% |
| ! | TTTTATGGGAAGGCCACTAA+GGG | - | chr3.3:82022332-82022351 | MS.gene38600:CDS | 40.0% |
| !! | TGGTAAAGTTGTTTCTGCAG+AGG | - | chr3.3:82022051-82022070 | MS.gene38600:intron | 40.0% |
| !!! | GAGTTTTTTGATTCGGGAAC+TGG | - | chr3.3:82022031-82022050 | MS.gene38600:intron | 40.0% |
| AAACAGGGGTTTAGCGTTTG+TGG | - | chr3.3:82021086-82021105 | MS.gene38600:CDS | 45.0% | |
| AAATACGGCCATCAGTGGAA+CGG | - | chr3.3:82021942-82021961 | MS.gene38600:CDS | 45.0% | |
| AATGCTGCGTAGGAGTTTGA+CGG | - | chr3.3:82021878-82021897 | MS.gene38600:intron | 45.0% | |
| CCTGGTAGTAGAGAACTCTT+CGG | + | chr3.3:82020843-82020862 | None:intergenic | 45.0% | |
| GCGTCAAATAGCAGTCATAG+TGG | - | chr3.3:82021393-82021412 | MS.gene38600:intron | 45.0% | |
| GGGTTTAGCGTTTGTGGAAA+TGG | - | chr3.3:82021092-82021111 | MS.gene38600:CDS | 45.0% | |
| TCTTCAGTGGTACTTGACCA+TGG | + | chr3.3:82020884-82020903 | None:intergenic | 45.0% | |
| TCTTGCCGAGTTTGAAGGAA+AGG | - | chr3.3:82022153-82022172 | MS.gene38600:CDS | 45.0% | |
| TTGTTCCTCGGTGGTTACTT+GGG | + | chr3.3:82020819-82020838 | None:intergenic | 45.0% | |
| TTTGTTCCTCGGTGGTTACT+TGG | + | chr3.3:82020820-82020839 | None:intergenic | 45.0% | |
| ! | GAACTCTTCGGTTTGTTCCT+CGG | + | chr3.3:82020831-82020850 | None:intergenic | 45.0% |
| ! | GGTGGTTACTTGGGTTTGTT+CGG | + | chr3.3:82020810-82020829 | None:intergenic | 45.0% |
| ! | TAAGCGGTTTGTTCAACTGG+CGG | - | chr3.3:82022365-82022384 | MS.gene38600:CDS | 45.0% |
| ! | TTCTGAGTTGAGCGTCAATG+AGG | - | chr3.3:82022416-82022435 | MS.gene38600:CDS | 45.0% |
| ! | TTGGGTTTGTTCGGAAGTAG+AGG | + | chr3.3:82020801-82020820 | None:intergenic | 45.0% |
| ACAAACCCAAGTAACCACCG+AGG | - | chr3.3:82020811-82020830 | MS.gene38600:intron | 50.0% | |
| AGAGCTGCAGAAGCTTCTTC+AGG | + | chr3.3:82021123-82021142 | None:intergenic | 50.0% | |
| CATAACCAGATGGCCGTCTA+GGG | + | chr3.3:82022093-82022112 | None:intergenic | 50.0% | |
| CCGAAGAGTTCTCTACTACC+AGG | - | chr3.3:82020840-82020859 | MS.gene38600:intron | 50.0% | |
| GAAGCTCTTGCCGAGTTTGA+AGG | - | chr3.3:82022148-82022167 | MS.gene38600:CDS | 50.0% | |
| GGAGAAAATACGGCCATCAG+TGG | - | chr3.3:82021937-82021956 | MS.gene38600:CDS | 50.0% | |
| TAAGGGTGGCACCTAGTAAG+CGG | - | chr3.3:82022349-82022368 | MS.gene38600:CDS | 50.0% | |
| ! | ATTGGCTTCCGTTCCACTGA+TGG | + | chr3.3:82021953-82021972 | None:intergenic | 50.0% |
| ! | TTACTAGGTGCCACCCTTAG+TGG | + | chr3.3:82022348-82022367 | None:intergenic | 50.0% |
| CCATAACCAGATGGCCGTCT+AGG | + | chr3.3:82022094-82022113 | None:intergenic | 55.0% | |
| CCTAGACGGCCATCTGGTTA+TGG | - | chr3.3:82022091-82022110 | MS.gene38600:intron | 55.0% | |
| TATGGGAAGGCCACTAAGGG+TGG | - | chr3.3:82022335-82022354 | MS.gene38600:CDS | 55.0% | |
| ! | CTCTTCGGTTTGTTCCTCGG+TGG | + | chr3.3:82020828-82020847 | None:intergenic | 55.0% |
| GAGAACCCTAGACGGCCATC+TGG | - | chr3.3:82022085-82022104 | MS.gene38600:intron | 60.0% | |
| ! | AACTGGCGGAGGAGAGTGCA+GGG | - | chr3.3:82022379-82022398 | MS.gene38600:CDS | 60.0% |
| ! | GCGGTTTGTTCAACTGGCGG+AGG | - | chr3.3:82022368-82022387 | MS.gene38600:CDS | 60.0% |
| ! | CAACTGGCGGAGGAGAGTGC+AGG | - | chr3.3:82022378-82022397 | MS.gene38600:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 82020587 | 82022461 | 82020587 | ID=MS.gene38600 |
| chr3.3 | mRNA | 82020587 | 82022461 | 82020587 | ID=MS.gene38600.t1;Parent=MS.gene38600 |
| chr3.3 | exon | 82022099 | 82022461 | 82022099 | ID=MS.gene38600.t1.exon1;Parent=MS.gene38600.t1 |
| chr3.3 | CDS | 82022099 | 82022461 | 82022099 | ID=cds.MS.gene38600.t1;Parent=MS.gene38600.t1 |
| chr3.3 | exon | 82021887 | 82021985 | 82021887 | ID=MS.gene38600.t1.exon2;Parent=MS.gene38600.t1 |
| chr3.3 | CDS | 82021887 | 82021985 | 82021887 | ID=cds.MS.gene38600.t1;Parent=MS.gene38600.t1 |
| chr3.3 | exon | 82020874 | 82021158 | 82020874 | ID=MS.gene38600.t1.exon3;Parent=MS.gene38600.t1 |
| chr3.3 | CDS | 82020874 | 82021158 | 82020874 | ID=cds.MS.gene38600.t1;Parent=MS.gene38600.t1 |
| chr3.3 | exon | 82020587 | 82020718 | 82020587 | ID=MS.gene38600.t1.exon4;Parent=MS.gene38600.t1 |
| chr3.3 | CDS | 82020587 | 82020718 | 82020587 | ID=cds.MS.gene38600.t1;Parent=MS.gene38600.t1 |
| Gene Sequence |
| Protein sequence |
