Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51540.t1 | XP_003588874.1 | 99.3 | 151 | 1 | 0 | 1 | 151 | 86 | 236 | 2.30E-82 | 314.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51540.t1 | O24296 | 96.5 | 143 | 5 | 0 | 9 | 151 | 94 | 236 | 2.3e-78 | 292.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51540.t1 | G7I893 | 99.3 | 151 | 1 | 0 | 1 | 151 | 86 | 236 | 1.7e-82 | 314.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene51540 | 0.837577 | 4.79E-57 | -1.69E-46 |
| MS.gene049346 | MS.gene51540 | 0.807001 | 6.26E-50 | -1.69E-46 |
| MS.gene049488 | MS.gene51540 | 0.830417 | 2.97E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene51540 | 0.814893 | 1.22E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene51540 | 0.80583 | 1.10E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene51540 | 0.816931 | 4.29E-52 | -1.69E-46 |
| MS.gene049910 | MS.gene51540 | 0.801659 | 8.11E-49 | -1.69E-46 |
| MS.gene049993 | MS.gene51540 | 0.820013 | 8.58E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene51540 | 0.808004 | 3.83E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene51540 | 0.807798 | 4.24E-50 | -1.69E-46 |
| MS.gene050397 | MS.gene51540 | 0.838977 | 2.09E-57 | -1.69E-46 |
| MS.gene050406 | MS.gene51540 | 0.845825 | 3.19E-59 | -1.69E-46 |
| MS.gene050426 | MS.gene51540 | -0.883662 | 3.71E-71 | -1.69E-46 |
| MS.gene050464 | MS.gene51540 | 0.870359 | 1.55E-66 | -1.69E-46 |
| MS.gene050529 | MS.gene51540 | 0.857246 | 1.86E-62 | -1.69E-46 |
| MS.gene050593 | MS.gene51540 | 0.80205 | 6.74E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene51540 | 0.88226 | 1.21E-70 | -1.69E-46 |
| MS.gene05105 | MS.gene51540 | 0.814223 | 1.72E-51 | -1.69E-46 |
| MS.gene051158 | MS.gene51540 | -0.807793 | 4.25E-50 | -1.69E-46 |
| MS.gene051208 | MS.gene51540 | 0.802005 | 6.89E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene51540 | 0.839704 | 1.35E-57 | -1.69E-46 |
| MS.gene051582 | MS.gene51540 | 0.879554 | 1.13E-69 | -1.69E-46 |
| MS.gene051666 | MS.gene51540 | 0.832362 | 9.87E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene51540 | 0.800854 | 1.19E-48 | -1.69E-46 |
| MS.gene051983 | MS.gene51540 | 0.809867 | 1.53E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene51540 | -0.854729 | 1.01E-61 | -1.69E-46 |
| MS.gene052077 | MS.gene51540 | 0.855948 | 4.48E-62 | -1.69E-46 |
| MS.gene052078 | MS.gene51540 | 0.819996 | 8.66E-53 | -1.69E-46 |
| MS.gene052128 | MS.gene51540 | -0.829482 | 5.02E-55 | -1.69E-46 |
| MS.gene052134 | MS.gene51540 | 0.839216 | 1.81E-57 | -1.69E-46 |
| MS.gene052135 | MS.gene51540 | 0.847803 | 9.18E-60 | -1.69E-46 |
| MS.gene052136 | MS.gene51540 | 0.800951 | 1.13E-48 | -1.69E-46 |
| MS.gene052188 | MS.gene51540 | 0.814291 | 1.66E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene51540 | 0.87704 | 8.64E-69 | -1.69E-46 |
| MS.gene052310 | MS.gene51540 | 0.833847 | 4.21E-56 | -1.69E-46 |
| MS.gene052322 | MS.gene51540 | 0.836539 | 8.82E-57 | -1.69E-46 |
| MS.gene052340 | MS.gene51540 | 0.839552 | 1.48E-57 | -1.69E-46 |
| MS.gene052414 | MS.gene51540 | 0.801014 | 1.10E-48 | -1.69E-46 |
| MS.gene052421 | MS.gene51540 | 0.807816 | 4.20E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene51540 | 0.857127 | 2.02E-62 | -1.69E-46 |
| MS.gene052485 | MS.gene51540 | 0.810671 | 1.03E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene51540 | 0.815157 | 1.07E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene51540 | 0.82598 | 3.49E-54 | -1.69E-46 |
| MS.gene052758 | MS.gene51540 | 0.820655 | 6.12E-53 | -1.69E-46 |
| MS.gene052982 | MS.gene51540 | 0.832629 | 8.48E-56 | -1.69E-46 |
| MS.gene053103 | MS.gene51540 | 0.824896 | 6.30E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene51540 | 0.805847 | 1.10E-49 | -1.69E-46 |
| MS.gene053330 | MS.gene51540 | 0.841054 | 6.00E-58 | -1.69E-46 |
| MS.gene053579 | MS.gene51540 | 0.818813 | 1.61E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene51540 | 0.830372 | 3.05E-55 | -1.69E-46 |
| MS.gene053971 | MS.gene51540 | 0.807667 | 4.52E-50 | -1.69E-46 |
| MS.gene054102 | MS.gene51540 | 0.845582 | 3.71E-59 | -1.69E-46 |
| MS.gene054123 | MS.gene51540 | 0.802883 | 4.54E-49 | -1.69E-46 |
| MS.gene05412 | MS.gene51540 | 0.800349 | 1.50E-48 | -1.69E-46 |
| MS.gene05413 | MS.gene51540 | 0.804723 | 1.88E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene51540 | 0.837873 | 4.02E-57 | -1.69E-46 |
| MS.gene054742 | MS.gene51540 | -0.814074 | 1.85E-51 | -1.69E-46 |
| MS.gene054918 | MS.gene51540 | 0.835623 | 1.51E-56 | -1.69E-46 |
| MS.gene054955 | MS.gene51540 | 0.81355 | 2.42E-51 | -1.69E-46 |
| MS.gene054983 | MS.gene51540 | 0.826991 | 2.00E-54 | -1.69E-46 |
| MS.gene055116 | MS.gene51540 | 0.859714 | 3.42E-63 | -1.69E-46 |
| MS.gene055277 | MS.gene51540 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene055369 | MS.gene51540 | 0.821378 | 4.17E-53 | -1.69E-46 |
| MS.gene055370 | MS.gene51540 | 0.852199 | 5.40E-61 | -1.69E-46 |
| MS.gene055422 | MS.gene51540 | 0.809347 | 1.98E-50 | -1.69E-46 |
| MS.gene055428 | MS.gene51540 | 0.821756 | 3.41E-53 | -1.69E-46 |
| MS.gene055533 | MS.gene51540 | 0.815853 | 7.47E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene51540 | 0.867395 | 1.41E-65 | -1.69E-46 |
| MS.gene05556 | MS.gene51540 | 0.811917 | 5.51E-51 | -1.69E-46 |
| MS.gene055601 | MS.gene51540 | -0.826748 | 2.29E-54 | -1.69E-46 |
| MS.gene05594 | MS.gene51540 | 0.830131 | 3.49E-55 | -1.69E-46 |
| MS.gene056233 | MS.gene51540 | 0.813235 | 2.84E-51 | -1.69E-46 |
| MS.gene056330 | MS.gene51540 | -0.802278 | 6.05E-49 | -1.69E-46 |
| MS.gene056337 | MS.gene51540 | 0.839867 | 1.23E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene51540 | 0.845507 | 3.89E-59 | -1.69E-46 |
| MS.gene056451 | MS.gene51540 | 0.802917 | 4.47E-49 | -1.69E-46 |
| MS.gene056497 | MS.gene51540 | 0.815454 | 9.17E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene51540 | 0.81944 | 1.16E-52 | -1.69E-46 |
| MS.gene056514 | MS.gene51540 | 0.827192 | 1.79E-54 | -1.69E-46 |
| MS.gene056612 | MS.gene51540 | 0.816777 | 4.64E-52 | -1.69E-46 |
| MS.gene056633 | MS.gene51540 | 0.836335 | 9.94E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene51540 | 0.811938 | 5.45E-51 | -1.69E-46 |
| MS.gene056723 | MS.gene51540 | 0.833516 | 5.10E-56 | -1.69E-46 |
| MS.gene056899 | MS.gene51540 | -0.863005 | 3.39E-64 | -1.69E-46 |
| MS.gene05702 | MS.gene51540 | 0.864255 | 1.39E-64 | -1.69E-46 |
| MS.gene057123 | MS.gene51540 | 0.806026 | 1.00E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene51540 | 0.856372 | 3.36E-62 | -1.69E-46 |
| MS.gene057310 | MS.gene51540 | 0.825622 | 4.24E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene51540 | 0.823783 | 1.15E-53 | -1.69E-46 |
| MS.gene057476 | MS.gene51540 | 0.802856 | 4.60E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene51540 | 0.839269 | 1.75E-57 | -1.69E-46 |
| MS.gene057823 | MS.gene51540 | 0.834041 | 3.77E-56 | -1.69E-46 |
| MS.gene057825 | MS.gene51540 | 0.814029 | 1.90E-51 | -1.69E-46 |
| MS.gene057888 | MS.gene51540 | 0.802322 | 5.93E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene51540 | 0.822225 | 2.65E-53 | -1.69E-46 |
| MS.gene058006 | MS.gene51540 | 0.82743 | 1.57E-54 | -1.69E-46 |
| MS.gene058142 | MS.gene51540 | 0.808794 | 2.60E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene51540 | 0.844588 | 6.89E-59 | -1.69E-46 |
| MS.gene058276 | MS.gene51540 | 0.824722 | 6.92E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene51540 | 0.803445 | 3.47E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene51540 | 0.801358 | 9.35E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene51540 | 0.804327 | 2.28E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene51540 | 0.819954 | 8.85E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene51540 | 0.820287 | 7.43E-53 | -1.69E-46 |
| MS.gene058746 | MS.gene51540 | 0.838392 | 2.95E-57 | -1.69E-46 |
| MS.gene05886 | MS.gene51540 | 0.839024 | 2.03E-57 | -1.69E-46 |
| MS.gene058928 | MS.gene51540 | 0.823654 | 1.23E-53 | -1.69E-46 |
| MS.gene059011 | MS.gene51540 | 0.830143 | 3.47E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene51540 | 0.826935 | 2.06E-54 | -1.69E-46 |
| MS.gene059141 | MS.gene51540 | 0.837327 | 5.55E-57 | -1.69E-46 |
| MS.gene059247 | MS.gene51540 | 0.808772 | 2.63E-50 | -1.69E-46 |
| MS.gene059285 | MS.gene51540 | 0.832052 | 1.18E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene51540 | 0.872066 | 4.23E-67 | -1.69E-46 |
| MS.gene059462 | MS.gene51540 | 0.806415 | 8.32E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene51540 | 0.813776 | 2.16E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene51540 | 0.839451 | 1.57E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene51540 | 0.829637 | 4.60E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene51540 | 0.827713 | 1.34E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene51540 | 0.80843 | 3.11E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene51540 | 0.829789 | 4.23E-55 | -1.69E-46 |
| MS.gene060087 | MS.gene51540 | -0.804286 | 2.32E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene51540 | 0.805815 | 1.11E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene51540 | 0.88202 | 1.48E-70 | -1.69E-46 |
| MS.gene061049 | MS.gene51540 | 0.871593 | 6.07E-67 | -1.69E-46 |
| MS.gene061114 | MS.gene51540 | -0.808148 | 3.57E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene51540 | 0.817341 | 3.47E-52 | -1.69E-46 |
| MS.gene061159 | MS.gene51540 | 0.839686 | 1.37E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51540.t1 | MTR_1g014210 | 99.338 | 151 | 1 | 0 | 1 | 151 | 86 | 236 | 1.14e-109 | 311 |
| MS.gene51540.t1 | MTR_8g098410 | 73.510 | 151 | 40 | 0 | 1 | 151 | 17 | 167 | 2.20e-80 | 234 |
| MS.gene51540.t1 | MTR_8g098410 | 73.510 | 151 | 40 | 0 | 1 | 151 | 83 | 233 | 1.07e-79 | 235 |
| MS.gene51540.t1 | MTR_8g105630 | 65.563 | 151 | 52 | 0 | 1 | 151 | 16 | 166 | 3.19e-72 | 214 |
| MS.gene51540.t1 | MTR_7g094600 | 64.000 | 150 | 54 | 0 | 1 | 150 | 19 | 168 | 3.07e-70 | 209 |
| MS.gene51540.t1 | MTR_8g098400 | 64.384 | 146 | 52 | 0 | 6 | 151 | 26 | 171 | 1.51e-67 | 202 |
| MS.gene51540.t1 | MTR_8g098400 | 64.964 | 137 | 48 | 0 | 6 | 142 | 26 | 162 | 9.18e-64 | 193 |
| MS.gene51540.t1 | MTR_1g072570 | 55.333 | 150 | 66 | 1 | 1 | 149 | 19 | 168 | 5.32e-59 | 181 |
| MS.gene51540.t1 | MTR_7g094600 | 64.516 | 124 | 44 | 0 | 27 | 150 | 7 | 130 | 3.90e-57 | 174 |
| MS.gene51540.t1 | MTR_5g010340 | 58.042 | 143 | 59 | 1 | 9 | 150 | 27 | 169 | 5.90e-57 | 176 |
| MS.gene51540.t1 | MTR_8g098400 | 62.097 | 124 | 47 | 0 | 28 | 151 | 1 | 124 | 2.74e-54 | 167 |
| MS.gene51540.t1 | MTR_8g098410 | 61.947 | 113 | 42 | 1 | 1 | 112 | 83 | 195 | 2.59e-43 | 142 |
| MS.gene51540.t1 | MTR_8g098400 | 60.606 | 99 | 39 | 0 | 6 | 104 | 26 | 124 | 2.08e-36 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51540.t1 | AT2G25080 | 84.768 | 151 | 23 | 0 | 1 | 151 | 86 | 236 | 1.77e-94 | 273 |
| MS.gene51540.t1 | AT4G31870 | 84.106 | 151 | 24 | 0 | 1 | 151 | 83 | 233 | 2.33e-92 | 267 |
| MS.gene51540.t1 | AT4G11600 | 73.333 | 150 | 40 | 0 | 1 | 150 | 80 | 229 | 1.74e-78 | 232 |
| MS.gene51540.t1 | AT2G43350 | 68.874 | 151 | 47 | 0 | 1 | 151 | 55 | 205 | 1.25e-73 | 219 |
| MS.gene51540.t1 | AT2G43350 | 68.874 | 151 | 47 | 0 | 1 | 151 | 55 | 205 | 1.25e-73 | 219 |
| MS.gene51540.t1 | AT2G31570 | 65.333 | 150 | 52 | 0 | 1 | 150 | 16 | 165 | 3.14e-70 | 209 |
| MS.gene51540.t1 | AT1G63460 | 63.087 | 149 | 55 | 0 | 1 | 149 | 16 | 164 | 1.36e-69 | 207 |
| MS.gene51540.t1 | AT3G63080 | 60.667 | 150 | 59 | 0 | 1 | 150 | 21 | 170 | 2.37e-65 | 197 |
| MS.gene51540.t1 | AT2G48150 | 57.718 | 149 | 63 | 0 | 1 | 149 | 19 | 167 | 1.59e-61 | 187 |
| MS.gene51540.t1 | AT2G48150 | 58.865 | 141 | 58 | 0 | 9 | 149 | 1 | 141 | 6.06e-60 | 182 |
| MS.gene51540.t1 | AT4G31870 | 70.588 | 51 | 15 | 0 | 1 | 51 | 83 | 133 | 1.84e-18 | 77.8 |
Find 30 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGAACCTTATCGAAAAT+TGG | 0.182500 | 1.4:-7921249 | None:intergenic |
| GTAGAACAGGTTGATGTAAA+TGG | 0.227839 | 1.4:+7921334 | MS.gene51540:intron |
| GCTTTCCCTTGCAATCAATT+TGG | 0.263308 | 1.4:+7921159 | MS.gene51540:CDS |
| TTCACGCAGCAAGTAACTTC+TGG | 0.359704 | 1.4:-7921809 | None:intergenic |
| CAGTTTCTGAAGTCAAGTTC+TGG | 0.365037 | 1.4:+7921379 | MS.gene51540:CDS |
| GACTTCAGAAACTGGTATAC+TGG | 0.374167 | 1.4:-7921370 | None:intergenic |
| TTAATTTCTTCATTTGATCC+AGG | 0.410664 | 1.4:-7921192 | None:intergenic |
| TGGTATACTGGAGCAGTAAA+TGG | 0.415807 | 1.4:-7921358 | None:intergenic |
| CAGAACTTGACTTCAGAAAC+TGG | 0.419102 | 1.4:-7921378 | None:intergenic |
| TAACATACCTCGATTTGAAA+AGG | 0.447002 | 1.4:-7921496 | None:intergenic |
| TTGCAATCAATTTGGCATGC+AGG | 0.453941 | 1.4:+7921167 | MS.gene51540:CDS |
| ATTTGAAAAGGAGAGGTTGT+TGG | 0.461689 | 1.4:-7921484 | None:intergenic |
| CAATTTGGCATGCAGGAGCC+TGG | 0.464234 | 1.4:+7921174 | MS.gene51540:CDS |
| TTCCCCTTGAATTTGCTAAG+AGG | 0.483787 | 1.4:-7919187 | None:intergenic |
| TGTGCCTCTTAGCAAATTCA+AGG | 0.492645 | 1.4:+7919183 | MS.gene51540:CDS |
| TGAAAAGGAGAGGTTGTTGG+TGG | 0.511106 | 1.4:-7921481 | None:intergenic |
| TGCATGCCAAATTGATTGCA+AGG | 0.530005 | 1.4:-7921165 | None:intergenic |
| TTAAGAAATTTGCTTGCACT+AGG | 0.553262 | 1.4:+7921211 | MS.gene51540:CDS |
| GAAAAGGAGAGGTTGTTGGT+GGG | 0.561717 | 1.4:-7921480 | None:intergenic |
| TATGAAAATTTCAAAGACAA+AGG | 0.572165 | 1.4:+7919856 | MS.gene51540:CDS |
| TTCTGAAGTCAAGTTCTGGA+GGG | 0.576508 | 1.4:+7921383 | MS.gene51540:CDS |
| TCTTAGCAAATTCAAGGGGA+AGG | 0.578922 | 1.4:+7919189 | MS.gene51540:CDS |
| TTGTCAATGTTGCTTCAAGA+TGG | 0.580677 | 1.4:+7919221 | MS.gene51540:CDS |
| GGTGCAGGATATTGATAAGA+AGG | 0.588234 | 1.4:+7919159 | None:intergenic |
| TTTCTGAAGTCAAGTTCTGG+AGG | 0.598538 | 1.4:+7921382 | MS.gene51540:CDS |
| GCATGCCAAATTGATTGCAA+GGG | 0.608481 | 1.4:-7921164 | None:intergenic |
| GTGCCTCTTAGCAAATTCAA+GGG | 0.611835 | 1.4:+7919184 | MS.gene51540:CDS |
| TACCTCGATTTGAAAAGGAG+AGG | 0.624143 | 1.4:-7921491 | None:intergenic |
| TGCCTCTTAGCAAATTCAAG+GGG | 0.679239 | 1.4:+7919185 | MS.gene51540:CDS |
| TTTGACATCATCAAACTACA+CGG | 0.712985 | 1.4:+7919819 | MS.gene51540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATTTATTATGACTAT+TGG | + | chr1.4:7919919-7919938 | MS.gene51540:intron | 10.0% |
| !! | TAGTCATAATAAATAATATA+AGG | - | chr1.4:7919918-7919937 | None:intergenic | 10.0% |
| !! | TCATTTAAAAAAAAATAGAA+GGG | + | chr1.4:7919652-7919671 | MS.gene51540:intron | 10.0% |
| !! | TTCATTTAAAAAAAAATAGA+AGG | + | chr1.4:7919651-7919670 | MS.gene51540:intron | 10.0% |
| !! | AAACATTAAAGTGAAAAATT+AGG | + | chr1.4:7920643-7920662 | MS.gene51540:intron | 15.0% |
| !! | ATTAACTTTATATTTGTGTT+TGG | + | chr1.4:7919255-7919274 | MS.gene51540:intron | 15.0% |
| !! | CATTTAAAAAAAAATAGAAG+GGG | + | chr1.4:7919653-7919672 | MS.gene51540:intron | 15.0% |
| !!! | ATTTTTTCTCAGTTATTTTT+AGG | - | chr1.4:7920790-7920809 | None:intergenic | 15.0% |
| !!! | GATTAAGCAAAAAATATTTT+AGG | - | chr1.4:7921753-7921772 | None:intergenic | 15.0% |
| !!! | TTTTTTCTCAGTTATTTTTA+GGG | - | chr1.4:7920789-7920808 | None:intergenic | 15.0% |
| !! | CAATGAATTATTAACTAGTT+AGG | + | chr1.4:7921565-7921584 | MS.gene51540:intron | 20.0% |
| !! | TACACTTGAAAGAAAAAAAA+GGG | - | chr1.4:7919281-7919300 | None:intergenic | 20.0% |
| !! | TATGAAAATTTCAAAGACAA+AGG | + | chr1.4:7919856-7919875 | MS.gene51540:CDS | 20.0% |
| !! | TTACACTTGAAAGAAAAAAA+AGG | - | chr1.4:7919282-7919301 | None:intergenic | 20.0% |
| !! | TTGTTATACAAAAATAGAGT+CGG | + | chr1.4:7919549-7919568 | MS.gene51540:intron | 20.0% |
| !! | TTTCCATATAAAGATATGTT+TGG | - | chr1.4:7920261-7920280 | None:intergenic | 20.0% |
| !!! | AAACAAATAGTTCTAAATTG+CGG | + | chr1.4:7919353-7919372 | MS.gene51540:intron | 20.0% |
| !!! | AAACACATGCATTTTATTTT+AGG | - | chr1.4:7920463-7920482 | None:intergenic | 20.0% |
| !!! | ATTAGACCTTTTCAAATAAT+AGG | - | chr1.4:7919723-7919742 | None:intergenic | 20.0% |
| !!! | ATTTTTGTATAACAAACTAG+AGG | - | chr1.4:7919544-7919563 | None:intergenic | 20.0% |
| !!! | CTTGTTTTGTTTTGTAATTT+GGG | + | chr1.4:7920715-7920734 | MS.gene51540:intron | 20.0% |
| !!! | TTGCATTTTGATTACAATTT+TGG | + | chr1.4:7920818-7920837 | MS.gene51540:intron | 20.0% |
| !!! | TTGTTTTGTTTTGTAATTTG+GGG | + | chr1.4:7920716-7920735 | MS.gene51540:intron | 20.0% |
| !!! | TTTTTCTCAGTTATTTTTAG+GGG | - | chr1.4:7920788-7920807 | None:intergenic | 20.0% |
| ! | AAATTACATTGACATACTTG+AGG | - | chr1.4:7921596-7921615 | None:intergenic | 25.0% |
| ! | AAATTCTTGGTCGATAAAAA+TGG | + | chr1.4:7921439-7921458 | MS.gene51540:CDS | 25.0% |
| ! | AGAGAGTAATATATCTTTAG+TGG | + | chr1.4:7921631-7921650 | MS.gene51540:intron | 25.0% |
| ! | ATATTCAAGAACAGTAAAAC+AGG | - | chr1.4:7919430-7919449 | None:intergenic | 25.0% |
| ! | ATCTTTATATGGAAAGCTAT+TGG | + | chr1.4:7920266-7920285 | MS.gene51540:intron | 25.0% |
| ! | ATTGAATGATTTCCTTTGAA+TGG | + | chr1.4:7919790-7919809 | MS.gene51540:intron | 25.0% |
| ! | CCAAATTACAAAACAAAACA+AGG | - | chr1.4:7920717-7920736 | None:intergenic | 25.0% |
| ! | GTTTCTCCTATTATTTGAAA+AGG | + | chr1.4:7919714-7919733 | MS.gene51540:intron | 25.0% |
| ! | TAAAGTGAAAAATTAGGCAT+GGG | + | chr1.4:7920649-7920668 | MS.gene51540:intron | 25.0% |
| ! | TAAGCTGTATTTGATTACAT+CGG | + | chr1.4:7921707-7921726 | MS.gene51540:intron | 25.0% |
| ! | TATTCAAGAACAGTAAAACA+GGG | - | chr1.4:7919429-7919448 | None:intergenic | 25.0% |
| ! | TATTCGAAACATTTCTCTAT+AGG | + | chr1.4:7920235-7920254 | MS.gene51540:intron | 25.0% |
| ! | TATTGAACCTTATCGAAAAT+TGG | - | chr1.4:7921252-7921271 | None:intergenic | 25.0% |
| ! | TGTAATCTATTCTTAACTAC+TGG | - | chr1.4:7921287-7921306 | None:intergenic | 25.0% |
| ! | TTAAAGTGAAAAATTAGGCA+TGG | + | chr1.4:7920648-7920667 | MS.gene51540:intron | 25.0% |
| ! | TTAATTTCTTCATTTGATCC+AGG | - | chr1.4:7921195-7921214 | None:intergenic | 25.0% |
| !! | AAACACATTTTGAATCTTCA+CGG | + | chr1.4:7920363-7920382 | MS.gene51540:intron | 25.0% |
| !! | AGAATTTCCAATTTTCGATA+AGG | + | chr1.4:7921242-7921261 | MS.gene51540:CDS | 25.0% |
| !! | AGTATGTCAATGTAATTTTC+CGG | + | chr1.4:7921598-7921617 | MS.gene51540:intron | 25.0% |
| !! | TTTCTTTCAAGTGTAATGTT+CGG | + | chr1.4:7919286-7919305 | MS.gene51540:intron | 25.0% |
| !! | TTTGTTTGCAGCTTTTTAAT+AGG | + | chr1.4:7920750-7920769 | MS.gene51540:intron | 25.0% |
| !!! | AGTCTAGCTTCTAATTTTTA+TGG | + | chr1.4:7921539-7921558 | MS.gene51540:intron | 25.0% |
| !!! | ATAAAATGCATGTGTTTTTG+TGG | + | chr1.4:7920466-7920485 | MS.gene51540:intron | 25.0% |
| !!! | CCTTGTTTTGTTTTGTAATT+TGG | + | chr1.4:7920714-7920733 | MS.gene51540:intron | 25.0% |
| !!! | GTTATTGGTATTTTTAGATG+TGG | + | chr1.4:7920140-7920159 | MS.gene51540:intron | 25.0% |
| !!! | TAAAATGCATGTGTTTTTGT+GGG | + | chr1.4:7920467-7920486 | MS.gene51540:intron | 25.0% |
| !!! | TATTAATTTGTCTGACACTA+TGG | + | chr1.4:7920555-7920574 | MS.gene51540:intron | 25.0% |
| !!! | TTACTCTCTTCAATTTTTTC+CGG | - | chr1.4:7921620-7921639 | None:intergenic | 25.0% |
| !!! | TTTTCTCAGTTATTTTTAGG+GGG | - | chr1.4:7920787-7920806 | None:intergenic | 25.0% |
| AAAATGTGTTTGTCCATTGA+GGG | - | chr1.4:7920354-7920373 | None:intergenic | 30.0% | |
| AAAGTGAAAAATTAGGCATG+GGG | + | chr1.4:7920650-7920669 | MS.gene51540:intron | 30.0% | |
| AATTTGATGTCTTGCATTAG+AGG | - | chr1.4:7919504-7919523 | None:intergenic | 30.0% | |
| ACAAGGAAACTAAAAATGTG+TGG | - | chr1.4:7921110-7921129 | None:intergenic | 30.0% | |
| AGGCCAAACATATCTTTATA+TGG | + | chr1.4:7920255-7920274 | MS.gene51540:intron | 30.0% | |
| ATATCCTAAATTGCAAACAG+TGG | - | chr1.4:7920538-7920557 | None:intergenic | 30.0% | |
| ATCACTTATCCAACAAGTTA+GGG | + | chr1.4:7919619-7919638 | MS.gene51540:intron | 30.0% | |
| ATTTCCACTGTTTGCAATTT+AGG | + | chr1.4:7920531-7920550 | MS.gene51540:intron | 30.0% | |
| GAAAGTTATGTCAAAGTTTC+TGG | + | chr1.4:7919753-7919772 | MS.gene51540:intron | 30.0% | |
| TCGCTTTCGAATGTATAATT+TGG | - | chr1.4:7921006-7921025 | None:intergenic | 30.0% | |
| TGAATTTCAATAGGAAGGAA+GGG | - | chr1.4:7920113-7920132 | None:intergenic | 30.0% | |
| TGTGAATTAAGTTAACCAAC+TGG | + | chr1.4:7920177-7920196 | MS.gene51540:intron | 30.0% | |
| TTCTACAAAACTTCAGTACT+TGG | - | chr1.4:7921320-7921339 | None:intergenic | 30.0% | |
| TTTGACATCATCAAACTACA+CGG | + | chr1.4:7919819-7919838 | MS.gene51540:CDS | 30.0% | |
| ! | AACACATTTTGAATCTTCAC+GGG | + | chr1.4:7920364-7920383 | MS.gene51540:intron | 30.0% |
| ! | AGACAAAGGTACATTACTTA+TGG | + | chr1.4:7919870-7919889 | MS.gene51540:intron | 30.0% |
| ! | CTAGCTTCTAATTTTTATGG+TGG | + | chr1.4:7921542-7921561 | MS.gene51540:intron | 30.0% |
| ! | GGTGTTGAAGAATTTACAAA+AGG | + | chr1.4:7920897-7920916 | MS.gene51540:intron | 30.0% |
| ! | TAACATACCTCGATTTGAAA+AGG | - | chr1.4:7921499-7921518 | None:intergenic | 30.0% |
| ! | TCTGAATCTATCTCTACTTT+TGG | + | chr1.4:7919978-7919997 | MS.gene51540:intron | 30.0% |
| ! | TTAAGAAATTTGCTTGCACT+AGG | + | chr1.4:7921211-7921230 | MS.gene51540:CDS | 30.0% |
| ! | TTCTTTCAAGTGTAATGTTC+GGG | + | chr1.4:7919287-7919306 | MS.gene51540:intron | 30.0% |
| !! | ATAGGATTAGCTTCTGTATA+AGG | + | chr1.4:7920423-7920442 | MS.gene51540:intron | 30.0% |
| !! | GTGGAATTTTGAGAAATTCT+TGG | + | chr1.4:7921426-7921445 | MS.gene51540:CDS | 30.0% |
| !! | TTGTTGTTTCTCTTTGAACA+TGG | + | chr1.4:7921046-7921065 | MS.gene51540:intron | 30.0% |
| !!! | ATTTTATTTTAGGTTTCCCC+AGG | - | chr1.4:7920453-7920472 | None:intergenic | 30.0% |
| !!! | TGGTATTTTTAGATGTGGAT+AGG | + | chr1.4:7920145-7920164 | MS.gene51540:intron | 30.0% |
| !!! | TTTCTCAGTTATTTTTAGGG+GGG | - | chr1.4:7920786-7920805 | None:intergenic | 30.0% |
| AAATGTGTTTGTCCATTGAG+GGG | - | chr1.4:7920353-7920372 | None:intergenic | 35.0% | |
| AAGTGAACTAGTGAAGAAGA+TGG | + | chr1.4:7920675-7920694 | MS.gene51540:intron | 35.0% | |
| AATAGGTTCAATAGGAAGGA+AGG | - | chr1.4:7920056-7920075 | None:intergenic | 35.0% | |
| ACCAACTGGATATGATGATA+TGG | + | chr1.4:7920191-7920210 | MS.gene51540:intron | 35.0% | |
| ACCATATCATCATATCCAGT+TGG | - | chr1.4:7920195-7920214 | None:intergenic | 35.0% | |
| ACCTATGCCTGAATTTCAAT+AGG | - | chr1.4:7920122-7920141 | None:intergenic | 35.0% | |
| ACTAACGTAAGTAGCATATC+AGG | + | chr1.4:7920928-7920947 | MS.gene51540:intron | 35.0% | |
| AGCAAATAGGTTCAATAGGA+AGG | - | chr1.4:7920060-7920079 | None:intergenic | 35.0% | |
| AGCATACTTAATACCACTCA+TGG | - | chr1.4:7919332-7919351 | None:intergenic | 35.0% | |
| ATGCCTGAATTTCAATAGGA+AGG | - | chr1.4:7920118-7920137 | None:intergenic | 35.0% | |
| ATTTGAAAAGGAGAGGTTGT+TGG | - | chr1.4:7921487-7921506 | None:intergenic | 35.0% | |
| CAAAATGTGTTTGTCCATTG+AGG | - | chr1.4:7920355-7920374 | None:intergenic | 35.0% | |
| CAGTGGAAATAAAGCAAGAT+AGG | - | chr1.4:7920521-7920540 | None:intergenic | 35.0% | |
| CATCACTTATCCAACAAGTT+AGG | + | chr1.4:7919618-7919637 | MS.gene51540:intron | 35.0% | |
| CCTTCTGCAAAAATGTGAAA+CGG | - | chr1.4:7921785-7921804 | None:intergenic | 35.0% | |
| CTAACGTAAGTAGCATATCA+GGG | + | chr1.4:7920929-7920948 | MS.gene51540:intron | 35.0% | |
| CTGAATTTCAATAGGAAGGA+AGG | - | chr1.4:7920114-7920133 | None:intergenic | 35.0% | |
| CTTCCTTCCTATTGAAATTC+AGG | + | chr1.4:7920112-7920131 | MS.gene51540:intron | 35.0% | |
| CTTCTCTCCTAATCTTATAC+AGG | - | chr1.4:7920028-7920047 | None:intergenic | 35.0% | |
| CTTCTGCAAAAATGTGAAAC+GGG | - | chr1.4:7921784-7921803 | None:intergenic | 35.0% | |
| CTTCTGTATAAGGATATCCT+GGG | + | chr1.4:7920433-7920452 | MS.gene51540:intron | 35.0% | |
| GAAATTCAGGCATAGGTTAT+TGG | + | chr1.4:7920125-7920144 | MS.gene51540:intron | 35.0% | |
| GCATACTTAATACCACTCAT+GGG | - | chr1.4:7919331-7919350 | None:intergenic | 35.0% | |
| GCTCTATTTAAGCATACTTG+AGG | + | chr1.4:7919679-7919698 | MS.gene51540:intron | 35.0% | |
| GGAAAGCAAATAGGTTCAAT+AGG | - | chr1.4:7920064-7920083 | None:intergenic | 35.0% | |
| GTTGGATCCTGTATAAGATT+AGG | + | chr1.4:7920018-7920037 | MS.gene51540:intron | 35.0% | |
| TAAATGCCAAACAGAAAGCA+GGG | - | chr1.4:7920598-7920617 | None:intergenic | 35.0% | |
| TCCTATTGAAATTCAGGCAT+AGG | + | chr1.4:7920118-7920137 | MS.gene51540:intron | 35.0% | |
| TCTTATGCAGGAAAGCAAAT+AGG | - | chr1.4:7920073-7920092 | None:intergenic | 35.0% | |
| TGTCTAATCGTGTCTCAAAT+AGG | + | chr1.4:7920405-7920424 | MS.gene51540:intron | 35.0% | |
| TTAAATGCCAAACAGAAAGC+AGG | - | chr1.4:7920599-7920618 | None:intergenic | 35.0% | |
| TTCTGTATAAGGATATCCTG+GGG | + | chr1.4:7920434-7920453 | MS.gene51540:intron | 35.0% | |
| TTGCTTTCCTGCATAAGATT+GGG | + | chr1.4:7920075-7920094 | MS.gene51540:intron | 35.0% | |
| TTTGCTTTCCTGCATAAGAT+TGG | + | chr1.4:7920074-7920093 | MS.gene51540:intron | 35.0% | |
| ! | AGCTAGACTTTTGATGTTGT+TGG | - | chr1.4:7921528-7921547 | None:intergenic | 35.0% |
| ! | ATGTTTTCCATATCCACAAC+AGG | - | chr1.4:7920629-7920648 | None:intergenic | 35.0% |
| ! | GAAATCACTATGTTTTGCGT+TGG | + | chr1.4:7920000-7920019 | MS.gene51540:intron | 35.0% |
| ! | GGTGTTGAAGAATTTGCAAA+AGG | + | chr1.4:7920839-7920858 | MS.gene51540:intron | 35.0% |
| ! | TTGTCAATGTTGCTTCAAGA+TGG | + | chr1.4:7919221-7919240 | MS.gene51540:CDS | 35.0% |
| !! | GTACTGAAGTTTTGTAGAAC+AGG | + | chr1.4:7921321-7921340 | MS.gene51540:intron | 35.0% |
| !! | GTAGAACAGGTTGATGTAAA+TGG | + | chr1.4:7921334-7921353 | MS.gene51540:intron | 35.0% |
| !! | TGCATGTCCATTTTAACCAA+CGG | + | chr1.4:7920302-7920321 | MS.gene51540:intron | 35.0% |
| AAAGCTAGAATCTCCAAACC+TGG | - | chr1.4:7921144-7921163 | None:intergenic | 40.0% | |
| AAATGCCAAACAGAAAGCAG+GGG | - | chr1.4:7920597-7920616 | None:intergenic | 40.0% | |
| ACCTGGAAAGAAAATGCACA+AGG | - | chr1.4:7921127-7921146 | None:intergenic | 40.0% | |
| ACTTATCCAACAAGTTAGGG+TGG | + | chr1.4:7919622-7919641 | MS.gene51540:intron | 40.0% | |
| AGCATATCAGGGTCACTATA+TGG | + | chr1.4:7920940-7920959 | MS.gene51540:intron | 40.0% | |
| AGCTACAAGATCCAGATAAC+AGG | - | chr1.4:7919951-7919970 | None:intergenic | 40.0% | |
| ATATCAGGGTCACTATATGG+TGG | + | chr1.4:7920943-7920962 | MS.gene51540:intron | 40.0% | |
| ATTTAACAGTGTGCCTGTTG+TGG | + | chr1.4:7920613-7920632 | MS.gene51540:intron | 40.0% | |
| CAAAAATAGAGTCGGTGACT+TGG | + | chr1.4:7919557-7919576 | MS.gene51540:intron | 40.0% | |
| CAGAACTTGACTTCAGAAAC+TGG | - | chr1.4:7921381-7921400 | None:intergenic | 40.0% | |
| GACTTCAGAAACTGGTATAC+TGG | - | chr1.4:7921373-7921392 | None:intergenic | 40.0% | |
| GCATGCCAAATTGATTGCAA+GGG | - | chr1.4:7921167-7921186 | None:intergenic | 40.0% | |
| GCTTCTGTATAAGGATATCC+TGG | + | chr1.4:7920432-7920451 | MS.gene51540:intron | 40.0% | |
| GCTTTCCCTTGCAATCAATT+TGG | + | chr1.4:7921159-7921178 | MS.gene51540:CDS | 40.0% | |
| GTGCCTCTTAGCAAATTCAA+GGG | + | chr1.4:7919184-7919203 | MS.gene51540:CDS | 40.0% | |
| TCTTAGCAAATTCAAGGGGA+AGG | + | chr1.4:7919189-7919208 | MS.gene51540:CDS | 40.0% | |
| TGATTTCCTTTGAATGGCAG+CGG | + | chr1.4:7919796-7919815 | MS.gene51540:intron | 40.0% | |
| TGCAATCGTAATACGAGTTG+CGG | + | chr1.4:7919384-7919403 | MS.gene51540:intron | 40.0% | |
| TGCATGCCAAATTGATTGCA+AGG | - | chr1.4:7921168-7921187 | None:intergenic | 40.0% | |
| TGCCTCTTAGCAAATTCAAG+GGG | + | chr1.4:7919185-7919204 | MS.gene51540:CDS | 40.0% | |
| TGCTTTCCTGCATAAGATTG+GGG | + | chr1.4:7920076-7920095 | MS.gene51540:intron | 40.0% | |
| TGGTATACTGGAGCAGTAAA+TGG | - | chr1.4:7921361-7921380 | None:intergenic | 40.0% | |
| TGTGCCTCTTAGCAAATTCA+AGG | + | chr1.4:7919183-7919202 | MS.gene51540:CDS | 40.0% | |
| TTAGAGGAGTGAGAAAGTGA+TGG | - | chr1.4:7919488-7919507 | None:intergenic | 40.0% | |
| TTCAAGTGTAATGTTCGGGA+GGG | + | chr1.4:7919291-7919310 | MS.gene51540:intron | 40.0% | |
| TTGCAATCAATTTGGCATGC+AGG | + | chr1.4:7921167-7921186 | MS.gene51540:CDS | 40.0% | |
| ! | AACCTCTCCTTTTCAAATCG+AGG | + | chr1.4:7921489-7921508 | MS.gene51540:CDS | 40.0% |
| ! | CCGTTTCACATTTTTGCAGA+AGG | + | chr1.4:7921782-7921801 | MS.gene51540:intron | 40.0% |
| ! | CTGAACTGAGAGCATGAATT+TGG | + | chr1.4:7919595-7919614 | MS.gene51540:intron | 40.0% |
| ! | GTGCATTTTCTTTCCAGGTT+TGG | + | chr1.4:7921128-7921147 | MS.gene51540:intron | 40.0% |
| ! | TACCTCGATTTGAAAAGGAG+AGG | - | chr1.4:7921494-7921513 | None:intergenic | 40.0% |
| ! | TCCTTGTGCATTTTCTTTCC+AGG | + | chr1.4:7921123-7921142 | MS.gene51540:intron | 40.0% |
| ! | TTTCAAGTGTAATGTTCGGG+AGG | + | chr1.4:7919290-7919309 | MS.gene51540:intron | 40.0% |
| ! | TTTTCGGTGATCTTGTCAAG+TGG | + | chr1.4:7921407-7921426 | MS.gene51540:CDS | 40.0% |
| !! | CAGTTTCTGAAGTCAAGTTC+TGG | + | chr1.4:7921379-7921398 | MS.gene51540:CDS | 40.0% |
| !! | CATGTCCATTTTAACCAACG+GGG | + | chr1.4:7920304-7920323 | MS.gene51540:intron | 40.0% |
| !! | GCATGTCCATTTTAACCAAC+GGG | + | chr1.4:7920303-7920322 | MS.gene51540:intron | 40.0% |
| !! | TTCCCCTTGAATTTGCTAAG+AGG | - | chr1.4:7919190-7919209 | None:intergenic | 40.0% |
| !! | TTCTGAAGTCAAGTTCTGGA+GGG | + | chr1.4:7921383-7921402 | MS.gene51540:CDS | 40.0% |
| !! | TTTCTGAAGTCAAGTTCTGG+AGG | + | chr1.4:7921382-7921401 | MS.gene51540:CDS | 40.0% |
| !!! | TCAAGTTCTGGAGGGTTTTT+CGG | + | chr1.4:7921391-7921410 | MS.gene51540:CDS | 40.0% |
| AGGGAAAAATGCGACAGATG+CGG | - | chr1.4:7919410-7919429 | None:intergenic | 45.0% | |
| ATTGGTCGCTACCTGTTATC+TGG | + | chr1.4:7919937-7919956 | MS.gene51540:intron | 45.0% | |
| CTTTCCTGCATAAGATTGGG+GGG | + | chr1.4:7920078-7920097 | MS.gene51540:intron | 45.0% | |
| GAAAAGGAGAGGTTGTTGGT+GGG | - | chr1.4:7921483-7921502 | None:intergenic | 45.0% | |
| GCTTTCCTGCATAAGATTGG+GGG | + | chr1.4:7920077-7920096 | MS.gene51540:intron | 45.0% | |
| TGAAAAGGAGAGGTTGTTGG+TGG | - | chr1.4:7921484-7921503 | None:intergenic | 45.0% | |
| ! | ACTAGAGGTGTGTGTAACTG+AGG | - | chr1.4:7919529-7919548 | None:intergenic | 45.0% |
| ! | CTAGAGGTGTGTGTAACTGA+GGG | - | chr1.4:7919528-7919547 | None:intergenic | 45.0% |
| ! | CTCAACCCCGTTGGTTAAAA+TGG | - | chr1.4:7920312-7920331 | None:intergenic | 45.0% |
| ! | TAGAGGTGTGTGTAACTGAG+GGG | - | chr1.4:7919527-7919546 | None:intergenic | 45.0% |
| ! | TTTTCCCCCCAATCTTATGC+AGG | - | chr1.4:7920085-7920104 | None:intergenic | 45.0% |
| AGATGTGCTAGTCCCCTCAA+TGG | + | chr1.4:7920338-7920357 | MS.gene51540:intron | 50.0% | |
| CAGTGTGCCTGTTGTGGATA+TGG | + | chr1.4:7920619-7920638 | MS.gene51540:intron | 50.0% | |
| GAACATGAGTGAGCTCTTGC+TGG | + | chr1.4:7920965-7920984 | MS.gene51540:intron | 50.0% | |
| GTCAAACCGCTGCCATTCAA+AGG | - | chr1.4:7919805-7919824 | None:intergenic | 50.0% | |
| TCGTTCCCCTGCTTTCTGTT+TGG | + | chr1.4:7920589-7920608 | MS.gene51540:intron | 50.0% | |
| TTGCACTCACTTCCCATGAG+TGG | + | chr1.4:7919316-7919335 | MS.gene51540:intron | 50.0% | |
| ! | GACTCACCACCCTAACTTGT+TGG | - | chr1.4:7919631-7919650 | None:intergenic | 50.0% |
| CAATTTGGCATGCAGGAGCC+TGG | + | chr1.4:7921174-7921193 | MS.gene51540:CDS | 55.0% | |
| TCTGCTAGACTCAACCCCGT+TGG | - | chr1.4:7920321-7920340 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 7919166 | 7921830 | 7919166 | ID=MS.gene51540 |
| chr1.4 | mRNA | 7919166 | 7921830 | 7919166 | ID=MS.gene51540.t1;Parent=MS.gene51540 |
| chr1.4 | exon | 7919166 | 7919242 | 7919166 | ID=MS.gene51540.t1.exon1;Parent=MS.gene51540.t1 |
| chr1.4 | CDS | 7919166 | 7919242 | 7919166 | ID=cds.MS.gene51540.t1;Parent=MS.gene51540.t1 |
| chr1.4 | exon | 7919816 | 7919877 | 7919816 | ID=MS.gene51540.t1.exon2;Parent=MS.gene51540.t1 |
| chr1.4 | CDS | 7919816 | 7919877 | 7919816 | ID=cds.MS.gene51540.t1;Parent=MS.gene51540.t1 |
| chr1.4 | exon | 7921145 | 7921263 | 7921145 | ID=MS.gene51540.t1.exon3;Parent=MS.gene51540.t1 |
| chr1.4 | CDS | 7921145 | 7921263 | 7921145 | ID=cds.MS.gene51540.t1;Parent=MS.gene51540.t1 |
| chr1.4 | exon | 7921343 | 7921510 | 7921343 | ID=MS.gene51540.t1.exon4;Parent=MS.gene51540.t1 |
| chr1.4 | CDS | 7921343 | 7921510 | 7921343 | ID=cds.MS.gene51540.t1;Parent=MS.gene51540.t1 |
| chr1.4 | exon | 7921801 | 7921830 | 7921801 | ID=MS.gene51540.t1.exon5;Parent=MS.gene51540.t1 |
| chr1.4 | CDS | 7921801 | 7921830 | 7921801 | ID=cds.MS.gene51540.t1;Parent=MS.gene51540.t1 |
| Gene Sequence |
| Protein sequence |
