Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55026.t1 | XP_003624388.2 | 94.9 | 630 | 32 | 0 | 6 | 635 | 1 | 630 | 1.20E-252 | 882.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55026.t1 | Q9FF41 | 44.5 | 575 | 283 | 9 | 61 | 628 | 33 | 578 | 2.2e-53 | 211.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55026.t1 | G7KV75 | 94.9 | 630 | 32 | 0 | 6 | 635 | 1 | 630 | 8.5e-253 | 882.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene55026 | 0.834206 | 3.43E-56 | -1.69E-46 |
| MS.gene049151 | MS.gene55026 | 0.80442 | 2.18E-49 | -1.69E-46 |
| MS.gene049153 | MS.gene55026 | 0.836316 | 1.01E-56 | -1.69E-46 |
| MS.gene049351 | MS.gene55026 | 0.824816 | 6.57E-54 | -1.69E-46 |
| MS.gene049356 | MS.gene55026 | 0.894836 | 1.69E-75 | -1.69E-46 |
| MS.gene049369 | MS.gene55026 | 0.857747 | 1.32E-62 | -1.69E-46 |
| MS.gene049491 | MS.gene55026 | 0.808087 | 3.68E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene55026 | 0.837892 | 3.98E-57 | -1.69E-46 |
| MS.gene049662 | MS.gene55026 | 0.835049 | 2.10E-56 | -1.69E-46 |
| MS.gene049758 | MS.gene55026 | 0.843726 | 1.17E-58 | -1.69E-46 |
| MS.gene050128 | MS.gene55026 | 0.877807 | 4.67E-69 | -1.69E-46 |
| MS.gene050215 | MS.gene55026 | 0.815606 | 8.48E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene55026 | 0.847091 | 1.44E-59 | -1.69E-46 |
| MS.gene050397 | MS.gene55026 | 0.847335 | 1.23E-59 | -1.69E-46 |
| MS.gene050432 | MS.gene55026 | 0.821828 | 3.28E-53 | -1.69E-46 |
| MS.gene050499 | MS.gene55026 | 0.806884 | 6.62E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene55026 | 0.806408 | 8.35E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene55026 | 0.841309 | 5.14E-58 | -1.69E-46 |
| MS.gene050971 | MS.gene55026 | 0.857478 | 1.59E-62 | -1.69E-46 |
| MS.gene05105 | MS.gene55026 | 0.824405 | 8.22E-54 | -1.69E-46 |
| MS.gene051255 | MS.gene55026 | 0.805819 | 1.11E-49 | -1.69E-46 |
| MS.gene051360 | MS.gene55026 | 0.843593 | 1.27E-58 | -1.69E-46 |
| MS.gene051692 | MS.gene55026 | 0.820116 | 8.13E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene55026 | 0.849269 | 3.60E-60 | -1.69E-46 |
| MS.gene052078 | MS.gene55026 | 0.809214 | 2.11E-50 | -1.69E-46 |
| MS.gene052178 | MS.gene55026 | 0.811284 | 7.56E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene55026 | 0.878818 | 2.06E-69 | -1.69E-46 |
| MS.gene052253 | MS.gene55026 | 0.86671 | 2.34E-65 | -1.69E-46 |
| MS.gene052255 | MS.gene55026 | 0.804786 | 1.83E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene55026 | 0.822737 | 2.02E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene55026 | 0.848408 | 6.25E-60 | -1.69E-46 |
| MS.gene052414 | MS.gene55026 | 0.801673 | 8.06E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene55026 | 0.801031 | 1.09E-48 | -1.69E-46 |
| MS.gene052484 | MS.gene55026 | 0.804328 | 2.28E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene55026 | 0.864847 | 9.05E-65 | -1.69E-46 |
| MS.gene052777 | MS.gene55026 | -0.807676 | 4.50E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene55026 | 0.871734 | 5.45E-67 | -1.69E-46 |
| MS.gene053209 | MS.gene55026 | 0.834072 | 3.70E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene55026 | 0.847164 | 1.37E-59 | -1.69E-46 |
| MS.gene053557 | MS.gene55026 | 0.822387 | 2.43E-53 | -1.69E-46 |
| MS.gene053559 | MS.gene55026 | 0.803825 | 2.90E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene55026 | 0.851028 | 1.16E-60 | -1.69E-46 |
| MS.gene053813 | MS.gene55026 | 0.838107 | 3.50E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene55026 | 0.835853 | 1.32E-56 | -1.69E-46 |
| MS.gene053912 | MS.gene55026 | 0.824685 | 7.06E-54 | -1.69E-46 |
| MS.gene054010 | MS.gene55026 | 0.829062 | 6.35E-55 | -1.69E-46 |
| MS.gene054011 | MS.gene55026 | 0.824019 | 1.01E-53 | -1.69E-46 |
| MS.gene054012 | MS.gene55026 | 0.824548 | 7.60E-54 | -1.69E-46 |
| MS.gene054013 | MS.gene55026 | 0.819493 | 1.13E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene55026 | 0.827043 | 1.95E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene55026 | 0.822341 | 2.49E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene55026 | 0.817439 | 3.30E-52 | -1.69E-46 |
| MS.gene054556 | MS.gene55026 | 0.802595 | 5.21E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene55026 | 0.825591 | 4.31E-54 | -1.69E-46 |
| MS.gene055116 | MS.gene55026 | 0.855397 | 6.49E-62 | -1.69E-46 |
| MS.gene055277 | MS.gene55026 | 0.849848 | 2.48E-60 | -1.69E-46 |
| MS.gene055390 | MS.gene55026 | 0.837766 | 4.28E-57 | -1.69E-46 |
| MS.gene055422 | MS.gene55026 | 0.839137 | 1.90E-57 | -1.69E-46 |
| MS.gene055604 | MS.gene55026 | 0.832701 | 8.14E-56 | -1.69E-46 |
| MS.gene055666 | MS.gene55026 | 0.811991 | 5.31E-51 | -1.69E-46 |
| MS.gene055909 | MS.gene55026 | 0.820759 | 5.79E-53 | -1.69E-46 |
| MS.gene055911 | MS.gene55026 | 0.820309 | 7.34E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene55026 | 0.835302 | 1.82E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene55026 | 0.816165 | 6.37E-52 | -1.69E-46 |
| MS.gene056410 | MS.gene55026 | 0.823556 | 1.30E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene55026 | 0.849592 | 2.93E-60 | -1.69E-46 |
| MS.gene056447 | MS.gene55026 | 0.808452 | 3.08E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene55026 | 0.846557 | 2.02E-59 | -1.69E-46 |
| MS.gene056609 | MS.gene55026 | 0.829832 | 4.13E-55 | -1.69E-46 |
| MS.gene056659 | MS.gene55026 | 0.843374 | 1.46E-58 | -1.69E-46 |
| MS.gene056723 | MS.gene55026 | 0.807994 | 3.85E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene55026 | -0.800626 | 1.32E-48 | -1.69E-46 |
| MS.gene056902 | MS.gene55026 | 0.833859 | 4.19E-56 | -1.69E-46 |
| MS.gene056915 | MS.gene55026 | 0.800298 | 1.54E-48 | -1.69E-46 |
| MS.gene056931 | MS.gene55026 | 0.812132 | 4.94E-51 | -1.69E-46 |
| MS.gene056933 | MS.gene55026 | 0.809977 | 1.45E-50 | -1.69E-46 |
| MS.gene056935 | MS.gene55026 | 0.801521 | 8.66E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene55026 | 0.81007 | 1.38E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene55026 | 0.826403 | 2.76E-54 | -1.69E-46 |
| MS.gene05735 | MS.gene55026 | 0.815875 | 7.39E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene55026 | 0.832111 | 1.14E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene55026 | 0.877259 | 7.25E-69 | -1.69E-46 |
| MS.gene057449 | MS.gene55026 | 0.883451 | 4.44E-71 | -1.69E-46 |
| MS.gene057450 | MS.gene55026 | 0.87433 | 7.35E-68 | -1.69E-46 |
| MS.gene057469 | MS.gene55026 | 0.820491 | 6.67E-53 | -1.69E-46 |
| MS.gene057537 | MS.gene55026 | 0.852293 | 5.08E-61 | -1.69E-46 |
| MS.gene057734 | MS.gene55026 | 0.800863 | 1.18E-48 | -1.69E-46 |
| MS.gene057749 | MS.gene55026 | 0.830869 | 2.30E-55 | -1.69E-46 |
| MS.gene057779 | MS.gene55026 | 0.828754 | 7.54E-55 | -1.69E-46 |
| MS.gene057796 | MS.gene55026 | 0.822363 | 2.47E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene55026 | 0.833206 | 6.09E-56 | -1.69E-46 |
| MS.gene057927 | MS.gene55026 | 0.806386 | 8.44E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene55026 | 0.833907 | 4.07E-56 | -1.69E-46 |
| MS.gene058006 | MS.gene55026 | 0.805092 | 1.58E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene55026 | 0.820629 | 6.20E-53 | -1.69E-46 |
| MS.gene058075 | MS.gene55026 | 0.81972 | 1.00E-52 | -1.69E-46 |
| MS.gene058082 | MS.gene55026 | 0.80403 | 2.63E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene55026 | 0.856236 | 3.69E-62 | -1.69E-46 |
| MS.gene058293 | MS.gene55026 | 0.805102 | 1.57E-49 | -1.69E-46 |
| MS.gene058365 | MS.gene55026 | 0.816509 | 5.33E-52 | -1.69E-46 |
| MS.gene05842 | MS.gene55026 | 0.834307 | 3.23E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene55026 | 0.858258 | 9.32E-63 | -1.69E-46 |
| MS.gene058710 | MS.gene55026 | 0.803885 | 2.82E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene55026 | 0.805477 | 1.31E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene55026 | 0.887726 | 1.11E-72 | -1.69E-46 |
| MS.gene058948 | MS.gene55026 | 0.810272 | 1.25E-50 | -1.69E-46 |
| MS.gene058949 | MS.gene55026 | 0.83077 | 2.44E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene55026 | 0.86242 | 5.13E-64 | -1.69E-46 |
| MS.gene059285 | MS.gene55026 | 0.835874 | 1.30E-56 | -1.69E-46 |
| MS.gene059294 | MS.gene55026 | 0.869921 | 2.15E-66 | -1.69E-46 |
| MS.gene059366 | MS.gene55026 | 0.885731 | 6.31E-72 | -1.69E-46 |
| MS.gene059368 | MS.gene55026 | 0.81663 | 5.01E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene55026 | 0.860013 | 2.78E-63 | -1.69E-46 |
| MS.gene059462 | MS.gene55026 | 0.808725 | 2.69E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene55026 | 0.805771 | 1.14E-49 | -1.69E-46 |
| MS.gene059597 | MS.gene55026 | 0.834253 | 3.34E-56 | -1.69E-46 |
| MS.gene05959 | MS.gene55026 | 0.800166 | 1.64E-48 | -1.69E-46 |
| MS.gene059674 | MS.gene55026 | 0.830928 | 2.23E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene55026 | 0.826651 | 2.41E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene55026 | 0.855844 | 4.80E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene55026 | 0.852082 | 5.83E-61 | -1.69E-46 |
| MS.gene059695 | MS.gene55026 | 0.847504 | 1.11E-59 | -1.69E-46 |
| MS.gene059708 | MS.gene55026 | 0.832959 | 7.02E-56 | -1.69E-46 |
| MS.gene059711 | MS.gene55026 | 0.851633 | 7.81E-61 | -1.69E-46 |
| MS.gene059807 | MS.gene55026 | 0.883012 | 6.43E-71 | -1.69E-46 |
| MS.gene05984 | MS.gene55026 | 0.859957 | 2.89E-63 | -1.69E-46 |
| MS.gene05986 | MS.gene55026 | 0.803753 | 3.00E-49 | -1.69E-46 |
| MS.gene059876 | MS.gene55026 | 0.803339 | 3.65E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene55026 | 0.823923 | 1.07E-53 | -1.69E-46 |
| MS.gene059974 | MS.gene55026 | 0.812865 | 3.42E-51 | -1.69E-46 |
| MS.gene060247 | MS.gene55026 | 0.802476 | 5.51E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene55026 | 0.83975 | 1.31E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene55026 | 0.810482 | 1.13E-50 | -1.69E-46 |
| MS.gene060495 | MS.gene55026 | 0.850598 | 1.53E-60 | -1.69E-46 |
| MS.gene060559 | MS.gene55026 | 0.805164 | 1.52E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene55026 | 0.825357 | 4.90E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene55026 | 0.835612 | 1.52E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene55026 | 0.862875 | 3.72E-64 | -1.69E-46 |
| MS.gene060986 | MS.gene55026 | 0.819583 | 1.08E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene55026 | 0.827935 | 1.19E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene55026 | 0.853865 | 1.80E-61 | -1.69E-46 |
| MS.gene061051 | MS.gene55026 | -0.871355 | 7.28E-67 | -1.69E-46 |
| MS.gene061154 | MS.gene55026 | 0.816138 | 6.45E-52 | -1.69E-46 |
| MS.gene061159 | MS.gene55026 | 0.801915 | 7.19E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55026.t1 | MTR_7g082660 | 96.825 | 630 | 20 | 0 | 6 | 635 | 1 | 630 | 0.0 | 1203 |
| MS.gene55026.t1 | MTR_3g060660 | 28.571 | 644 | 395 | 17 | 17 | 632 | 31 | 637 | 6.40e-24 | 107 |
| MS.gene55026.t1 | MTR_3g060660 | 28.667 | 600 | 370 | 13 | 60 | 632 | 58 | 626 | 2.05e-23 | 105 |
| MS.gene55026.t1 | MTR_5g096080 | 27.496 | 651 | 399 | 18 | 16 | 630 | 29 | 642 | 1.91e-15 | 80.5 |
| MS.gene55026.t1 | MTR_3g007920 | 27.496 | 651 | 399 | 18 | 16 | 630 | 29 | 642 | 3.04e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55026.t1 | AT1G66840 | 40.238 | 589 | 322 | 9 | 60 | 635 | 35 | 606 | 1.00e-97 | 311 |
| MS.gene55026.t1 | AT1G66840 | 40.238 | 589 | 322 | 9 | 60 | 635 | 35 | 606 | 1.00e-97 | 311 |
| MS.gene55026.t1 | AT5G38150 | 39.161 | 572 | 312 | 9 | 61 | 625 | 33 | 575 | 1.34e-84 | 276 |
| MS.gene55026.t1 | AT5G55860 | 26.840 | 652 | 396 | 12 | 17 | 632 | 29 | 635 | 3.93e-22 | 101 |
| MS.gene55026.t1 | AT2G26570 | 26.243 | 503 | 326 | 11 | 60 | 533 | 204 | 690 | 6.44e-12 | 69.3 |
| MS.gene55026.t1 | AT2G26570 | 26.243 | 503 | 326 | 11 | 60 | 533 | 204 | 690 | 6.44e-12 | 69.3 |
Find 81 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGAATAACTTTGCCAAATT+TGG | 0.040291 | 7.2:+24508740 | None:intergenic |
| AAAGAAAGTTATTCCAAATT+TGG | 0.158348 | 7.2:-24508753 | MS.gene55026:CDS |
| CGCCTCAAGTTCCTCCTTTA+CGG | 0.197031 | 7.2:+24509663 | None:intergenic |
| TAGATACTCATATTCAAATT+TGG | 0.197756 | 7.2:+24509147 | None:intergenic |
| GTTGCAAATTCAATTGAATT+TGG | 0.240777 | 7.2:-24509788 | MS.gene55026:CDS |
| AGAAACAGATGAAGCTAAAA+TGG | 0.255073 | 7.2:-24509392 | MS.gene55026:CDS |
| TGATGCTTCGATTTCTTTCT+CGG | 0.285883 | 7.2:+24510080 | None:intergenic |
| AGTTCTCTTGTTCTTGAAGT+AGG | 0.315905 | 7.2:+24510435 | None:intergenic |
| TGTTAAAGCTCTTTCTTTCA+TGG | 0.315991 | 7.2:+24509198 | None:intergenic |
| ATTGAATTTGGTCAAAGAAA+TGG | 0.316878 | 7.2:-24509776 | MS.gene55026:CDS |
| CCAAATTTGGCAAAGTTATT+CGG | 0.321021 | 7.2:-24508740 | MS.gene55026:CDS |
| TTCTGCTGCAGCTGCATGAT+TGG | 0.331292 | 7.2:+24509123 | None:intergenic |
| AACAACTGAAGCTTTAGCTT+TGG | 0.339949 | 7.2:-24509248 | MS.gene55026:CDS |
| GGACTAATGTGCCGAGTTGC+AGG | 0.340914 | 7.2:+24508794 | None:intergenic |
| AGCAAGTACTTGTTCTTCAT+TGG | 0.359144 | 7.2:+24509996 | None:intergenic |
| AGAATTGGAATATCTCAAAA+AGG | 0.374578 | 7.2:-24510157 | MS.gene55026:CDS |
| AGAACAAGTACTTGCTGAAT+TGG | 0.382678 | 7.2:-24509989 | MS.gene55026:CDS |
| TTAAGAAAAGGCGACGAATC+AGG | 0.418875 | 7.2:-24509706 | MS.gene55026:CDS |
| AGAAAGAGTATTAAATCAAA+TGG | 0.421669 | 7.2:-24508866 | MS.gene55026:CDS |
| TGGTCAAAGAAATGGAGAAA+AGG | 0.424730 | 7.2:-24509768 | MS.gene55026:CDS |
| CTCCTTTACGGTTTGTAACT+CGG | 0.426077 | 7.2:+24509675 | None:intergenic |
| AGATGAAAGTATGAAACTAT+TGG | 0.426555 | 7.2:-24509737 | MS.gene55026:CDS |
| GTTCTCTTGTTCTTGAAGTA+GGG | 0.431248 | 7.2:+24510436 | None:intergenic |
| GAAGGTACAAAGAGAGTAGA+TGG | 0.434441 | 7.2:-24510389 | MS.gene55026:CDS |
| CATAGAAGCACTAGAGAAGA+AGG | 0.439651 | 7.2:-24510247 | MS.gene55026:CDS |
| TTATTAGTCTATATGATGAT+AGG | 0.440282 | 7.2:-24510830 | MS.gene55026:CDS |
| TTCCAATGTCTCTTCTAGCT+TGG | 0.442664 | 7.2:+24510409 | None:intergenic |
| TGCACAAGTGATGAGAGAAT+TGG | 0.443791 | 7.2:-24510172 | MS.gene55026:CDS |
| TGAGGCTTTGAAAGAGTTGG+AGG | 0.446916 | 7.2:-24509959 | MS.gene55026:CDS |
| GGTCAAAGAAATGGAGAAAA+GGG | 0.450694 | 7.2:-24509767 | MS.gene55026:CDS |
| TATATGATGATAGGAATCAT+AGG | 0.453671 | 7.2:-24510821 | MS.gene55026:CDS |
| AAAAGAAGAAGTACTTAGAA+AGG | 0.456072 | 7.2:-24510031 | MS.gene55026:CDS |
| AGATATTATAACAACTAAGT+TGG | 0.460017 | 7.2:-24509350 | MS.gene55026:CDS |
| TTGGAAGGAAGTTTAAGAAA+AGG | 0.468418 | 7.2:-24509718 | MS.gene55026:CDS |
| TGCTGAATTGGCCAGGATTG+AGG | 0.469806 | 7.2:-24509977 | MS.gene55026:CDS |
| TTATCTTTGATTAGAGATGA+AGG | 0.471079 | 7.2:-24509628 | MS.gene55026:CDS |
| TTTCTCTTCTTAAGAGTGAA+AGG | 0.481141 | 7.2:+24508773 | None:intergenic |
| AAATCTCTCTTCTATGATTG+AGG | 0.486372 | 7.2:-24510304 | MS.gene55026:CDS |
| GATTGAGGCTTTGAAAGAGT+TGG | 0.490184 | 7.2:-24509962 | MS.gene55026:CDS |
| CGAGCTGAAGCATGTAACTA+AGG | 0.490959 | 7.2:-24509569 | MS.gene55026:CDS |
| AACATGGTGCTATGGTTGTA+AGG | 0.493840 | 7.2:-24510215 | MS.gene55026:CDS |
| CTCTTTCAAAGCCTCAATCC+TGG | 0.493907 | 7.2:+24509966 | None:intergenic |
| TTCATTGAAGAAAACTCAGA+TGG | 0.494077 | 7.2:-24510784 | MS.gene55026:CDS |
| GAAATGGAGAAAAGGGTTCA+AGG | 0.496156 | 7.2:-24509760 | MS.gene55026:CDS |
| AAGTACTTGCTGAATTGGCC+AGG | 0.505239 | 7.2:-24509984 | MS.gene55026:CDS |
| GCACTAGAGAAGAAGGGAAA+AGG | 0.508748 | 7.2:-24510240 | MS.gene55026:CDS |
| AAGATGGATGATACTAAAGT+TGG | 0.511606 | 7.2:-24510882 | MS.gene55026:CDS |
| GAGCGAGAAGGAAATACTAC+TGG | 0.513052 | 7.2:-24509044 | MS.gene55026:CDS |
| GGTTCAAAATCTCAATTCAA+AGG | 0.530696 | 7.2:-24509515 | MS.gene55026:CDS |
| AAGTTGCGGCAGCTGAGGCA+TGG | 0.536231 | 7.2:-24509084 | MS.gene55026:CDS |
| GAAAACTCAGATGGACTTCG+AGG | 0.536749 | 7.2:-24510775 | MS.gene55026:CDS |
| AATAGTTCAAAGAGAACTCA+AGG | 0.539801 | 7.2:-24509014 | MS.gene55026:CDS |
| CACCAAGCTAGAAGAGACAT+TGG | 0.548216 | 7.2:-24510411 | MS.gene55026:CDS |
| GCAAGGCGTTATGAAAGAGT+TGG | 0.550969 | 7.2:-24509281 | MS.gene55026:CDS |
| GGTTTACATCAAAGAGAAGA+TGG | 0.551787 | 7.2:-24508966 | MS.gene55026:CDS |
| AAAAGGTCAACATGGTGCTA+TGG | 0.555928 | 7.2:-24510223 | MS.gene55026:CDS |
| CAAGGCTAAGGCGAAAATGA+AGG | 0.564183 | 7.2:-24510271 | MS.gene55026:CDS |
| TGATTTGTCTATCTCTTCCG+TGG | 0.565283 | 7.2:+24509858 | None:intergenic |
| GGAATCAAGTTACAAGGCTA+AGG | 0.570445 | 7.2:-24510283 | MS.gene55026:CDS |
| GATTGAGGAATCAAGTTACA+AGG | 0.579639 | 7.2:-24510289 | MS.gene55026:CDS |
| GGCATGGATTGAAGCGCTCA+AGG | 0.579700 | 7.2:-24509068 | MS.gene55026:CDS |
| TGAAATGAAACTAGCTATGA+CGG | 0.580891 | 7.2:-24509827 | MS.gene55026:CDS |
| TACCGAGTTACAAACCGTAA+AGG | 0.586528 | 7.2:-24509677 | MS.gene55026:CDS |
| AGAAGCCGCATCTGCTGCAG+AGG | 0.589655 | 7.2:-24509470 | MS.gene55026:CDS |
| GAAAGTATGAAACTATTGGA+AGG | 0.590746 | 7.2:-24509733 | MS.gene55026:CDS |
| GTTTAAGCTAAAGCTTGACG+TGG | 0.614923 | 7.2:-24510130 | MS.gene55026:CDS |
| AACCGTAAAGGAGGAACTTG+AGG | 0.624780 | 7.2:-24509665 | MS.gene55026:CDS |
| GGAAGAGATAGACAAATCAA+AGG | 0.630376 | 7.2:-24509854 | MS.gene55026:CDS |
| AAATCGAAGCATCAAGCTCG+AGG | 0.632512 | 7.2:-24510071 | MS.gene55026:CDS |
| CTGCTGCTTCACCTGCAACT+CGG | 0.636241 | 7.2:-24508805 | MS.gene55026:CDS |
| CGTAAAGGAGGAACTTGAGG+CGG | 0.638927 | 7.2:-24509662 | MS.gene55026:CDS |
| ATAGAAGCACTAGAGAAGAA+GGG | 0.639609 | 7.2:-24510246 | MS.gene55026:CDS |
| AAGCTAGAAGAGACATTGGA+AGG | 0.645006 | 7.2:-24510407 | MS.gene55026:CDS |
| CGAGTTACAAACCGTAAAGG+AGG | 0.647932 | 7.2:-24509674 | MS.gene55026:CDS |
| ATTTGAGATTGATACGAGTG+AGG | 0.648413 | 7.2:-24509311 | MS.gene55026:CDS |
| AGCGCTCAAGGCGAGCGAGA+AGG | 0.649761 | 7.2:-24509056 | MS.gene55026:CDS |
| AAGAAGGGAAAAGGTCAACA+TGG | 0.660376 | 7.2:-24510231 | MS.gene55026:CDS |
| AACTCAGATGGACTTCGAGG+CGG | 0.685948 | 7.2:-24510772 | MS.gene55026:CDS |
| ATGGTGCTATGGTTGTAAGG+AGG | 0.699881 | 7.2:-24510212 | MS.gene55026:CDS |
| CTTCGAGGCGGATTTCTCAG+CGG | 0.722767 | 7.2:-24510760 | MS.gene55026:intron |
| TGCAAGAAGAGTTAGCAGTG+AGG | 0.733527 | 7.2:-24508942 | MS.gene55026:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATTAATTCATTTATTTA+TGG | + | chr7.2:24509073-24509092 | None:intergenic | 10.0% |
| !! | ATAATATAGAAAAATATTAG+AGG | + | chr7.2:24509541-24509560 | None:intergenic | 10.0% |
| !! | TACAAAAAAAAACAAAAAAA+TGG | - | chr7.2:24509016-24509035 | MS.gene55026:CDS | 10.0% |
| !! | ACATGAAAAATAAAAATATG+TGG | + | chr7.2:24509470-24509489 | None:intergenic | 15.0% |
| !! | TAATAATGCATATACAATAT+TGG | + | chr7.2:24510077-24510096 | None:intergenic | 15.0% |
| !! | AAACACAAGAAAAAAGTTAA+AGG | - | chr7.2:24510719-24510738 | MS.gene55026:intron | 20.0% |
| !! | AAAGAAAGTTATTCCAAATT+TGG | - | chr7.2:24511850-24511869 | MS.gene55026:intron | 20.0% |
| !! | AAATTGAAAGATGAGAAAAT+TGG | - | chr7.2:24509306-24509325 | MS.gene55026:CDS | 20.0% |
| !! | AATTGAAAGATGAGAAAATT+GGG | - | chr7.2:24509307-24509326 | MS.gene55026:CDS | 20.0% |
| !! | ACAACAATCACAATATTAAA+GGG | + | chr7.2:24509105-24509124 | None:intergenic | 20.0% |
| !! | AGATATTATAACAACTAAGT+TGG | - | chr7.2:24511253-24511272 | MS.gene55026:intron | 20.0% |
| !! | GTATATGCATTATTATATTG+TGG | - | chr7.2:24510082-24510101 | MS.gene55026:CDS | 20.0% |
| !! | TAGATACTCATATTCAAATT+TGG | + | chr7.2:24511459-24511478 | None:intergenic | 20.0% |
| !!! | AAATGAGTTTTCTTTGAAAT+TGG | - | chr7.2:24510695-24510714 | MS.gene55026:intron | 20.0% |
| !!! | AATCTCAAATTCAGTTTTTT+CGG | + | chr7.2:24511282-24511301 | None:intergenic | 20.0% |
| !!! | AGAAAGAGTATTAAATCAAA+TGG | - | chr7.2:24511737-24511756 | MS.gene55026:intron | 20.0% |
| !!! | TTATTAGTCTATATGATGAT+AGG | - | chr7.2:24509773-24509792 | MS.gene55026:CDS | 20.0% |
| !!! | TTCTATCTTTTGTTATAGAA+AGG | - | chr7.2:24509992-24510011 | MS.gene55026:CDS | 20.0% |
| ! | AAAATTGATGCTTACATTAG+AGG | - | chr7.2:24508831-24508850 | MS.gene55026:CDS | 25.0% |
| ! | AGAATTGGAATATCTCAAAA+AGG | - | chr7.2:24510446-24510465 | MS.gene55026:intron | 25.0% |
| ! | ATTGAATTTGGTCAAAGAAA+TGG | - | chr7.2:24510827-24510846 | MS.gene55026:CDS | 25.0% |
| ! | CAACAATCACAATATTAAAG+GGG | + | chr7.2:24509104-24509123 | None:intergenic | 25.0% |
| ! | CACAACAATCACAATATTAA+AGG | + | chr7.2:24509106-24509125 | None:intergenic | 25.0% |
| ! | GTGTTGAATATGTTAATACA+AGG | - | chr7.2:24509625-24509644 | MS.gene55026:CDS | 25.0% |
| ! | GTTGCAAATTCAATTGAATT+TGG | - | chr7.2:24510815-24510834 | MS.gene55026:CDS | 25.0% |
| ! | TATATGATGATAGGAATCAT+AGG | - | chr7.2:24509782-24509801 | MS.gene55026:CDS | 25.0% |
| ! | TTATCTTTGATTAGAGATGA+AGG | - | chr7.2:24510975-24510994 | MS.gene55026:intron | 25.0% |
| !! | AGATGAAAGTATGAAACTAT+TGG | - | chr7.2:24510866-24510885 | MS.gene55026:CDS | 25.0% |
| !! | AGTGAATTTAAAACCAAAAG+TGG | - | chr7.2:24509273-24509292 | MS.gene55026:CDS | 25.0% |
| !! | TAAATTCATTCCTTCAGTTT+TGG | - | chr7.2:24509695-24509714 | MS.gene55026:CDS | 25.0% |
| !! | TCATCTTTCAATTTTTGCTT+AGG | + | chr7.2:24509300-24509319 | None:intergenic | 25.0% |
| !! | TGAAACTTAATTCTTTTAGC+AGG | + | chr7.2:24511773-24511792 | None:intergenic | 25.0% |
| !!! | AAAAGAAGAAGTACTTAGAA+AGG | - | chr7.2:24510572-24510591 | MS.gene55026:intron | 25.0% |
| !!! | AATACAAGGTGATTGTTTTT+AGG | - | chr7.2:24509639-24509658 | MS.gene55026:CDS | 25.0% |
| !!! | CATCAATTTTGATTTGGTTA+AGG | + | chr7.2:24508821-24508840 | None:intergenic | 25.0% |
| !!! | TGTAAGCATCAATTTTGATT+TGG | + | chr7.2:24508827-24508846 | None:intergenic | 25.0% |
| AAATCTCTCTTCTATGATTG+AGG | - | chr7.2:24510299-24510318 | MS.gene55026:CDS | 30.0% | |
| AAGATGGATGATACTAAAGT+TGG | - | chr7.2:24509721-24509740 | MS.gene55026:CDS | 30.0% | |
| AATAGTTCAAAGAGAACTCA+AGG | - | chr7.2:24511589-24511608 | MS.gene55026:intron | 30.0% | |
| AATCCTTCACAAATAAGTGA+AGG | + | chr7.2:24509139-24509158 | None:intergenic | 30.0% | |
| ACAGAAAATTAGATAGTGAC+AGG | - | chr7.2:24509359-24509378 | MS.gene55026:CDS | 30.0% | |
| AGAAACAGATGAAGCTAAAA+TGG | - | chr7.2:24511211-24511230 | MS.gene55026:intron | 30.0% | |
| CACAAGAAAAAAGTTAAAGG+AGG | - | chr7.2:24510722-24510741 | MS.gene55026:intron | 30.0% | |
| CACAGTTATTACAAACTACA+TGG | + | chr7.2:24508971-24508990 | None:intergenic | 30.0% | |
| CCAAATTTGGCAAAGTTATT+CGG | - | chr7.2:24511863-24511882 | MS.gene55026:intron | 30.0% | |
| GGTTCAAAATCTCAATTCAA+AGG | - | chr7.2:24511088-24511107 | MS.gene55026:intron | 30.0% | |
| TGAAATGAAACTAGCTATGA+CGG | - | chr7.2:24510776-24510795 | MS.gene55026:CDS | 30.0% | |
| TGTTAAAGCTCTTTCTTTCA+TGG | + | chr7.2:24511408-24511427 | None:intergenic | 30.0% | |
| TTCATTGAAGAAAACTCAGA+TGG | - | chr7.2:24509819-24509838 | MS.gene55026:CDS | 30.0% | |
| TTGGAAGGAAGTTTAAGAAA+AGG | - | chr7.2:24510885-24510904 | MS.gene55026:CDS | 30.0% | |
| TTTCTCTTCTTAAGAGTGAA+AGG | + | chr7.2:24511833-24511852 | None:intergenic | 30.0% | |
| ! | AATAGTGTAACTTGTGACAA+GGG | + | chr7.2:24509234-24509253 | None:intergenic | 30.0% |
| ! | ACTCAAGGAAAACATTTTGA+AGG | - | chr7.2:24511604-24511623 | MS.gene55026:intron | 30.0% |
| ! | ACTTGCTGATAAAAAAGTTG+CGG | - | chr7.2:24511505-24511524 | MS.gene55026:intron | 30.0% |
| ! | AGATGAAGGTTTTCAGTTTA+TGG | - | chr7.2:24510989-24511008 | MS.gene55026:intron | 30.0% |
| ! | GAAAGTATGAAACTATTGGA+AGG | - | chr7.2:24510870-24510889 | MS.gene55026:CDS | 30.0% |
| ! | GTAGTTTGTAATAACTGTGT+TGG | - | chr7.2:24508972-24508991 | MS.gene55026:CDS | 30.0% |
| ! | TAATAGTGTAACTTGTGACA+AGG | + | chr7.2:24509235-24509254 | None:intergenic | 30.0% |
| ! | TTTTCAGTTTATGGCTTCTA+TGG | - | chr7.2:24510998-24511017 | MS.gene55026:intron | 30.0% |
| !! | AAAACATTTTGAAGGAAGAG+AGG | - | chr7.2:24511612-24511631 | MS.gene55026:intron | 30.0% |
| !! | AAACATTTTGAAGGAAGAGA+GGG | - | chr7.2:24511613-24511632 | MS.gene55026:intron | 30.0% |
| AAAAAAGTTAAAGGAGGCCA+CGG | - | chr7.2:24510728-24510747 | MS.gene55026:intron | 35.0% | |
| AAACTATCCTAGAAAGCTTG+TGG | + | chr7.2:24509885-24509904 | None:intergenic | 35.0% | |
| AGCAAGTACTTGTTCTTCAT+TGG | + | chr7.2:24510610-24510629 | None:intergenic | 35.0% | |
| AGTTCTCTTGTTCTTGAAGT+AGG | + | chr7.2:24510171-24510190 | None:intergenic | 35.0% | |
| CAAATGTCCTAACAAGAAGA+GGG | + | chr7.2:24509431-24509450 | None:intergenic | 35.0% | |
| CCGAATAACTTTGCCAAATT+TGG | + | chr7.2:24511866-24511885 | None:intergenic | 35.0% | |
| CTCCTTCCAGATCATATATA+GGG | + | chr7.2:24508751-24508770 | None:intergenic | 35.0% | |
| CTTATTTCCACAAGCTTTCT+AGG | - | chr7.2:24509875-24509894 | MS.gene55026:CDS | 35.0% | |
| CTTGAAGAAAAACGATTCGT+CGG | - | chr7.2:24511067-24511086 | MS.gene55026:intron | 35.0% | |
| GATTGAGGAATCAAGTTACA+AGG | - | chr7.2:24510314-24510333 | MS.gene55026:CDS | 35.0% | |
| GGAAGAGATAGACAAATCAA+AGG | - | chr7.2:24510749-24510768 | MS.gene55026:intron | 35.0% | |
| GGTCAAAGAAATGGAGAAAA+GGG | - | chr7.2:24510836-24510855 | MS.gene55026:CDS | 35.0% | |
| GGTTTACATCAAAGAGAAGA+TGG | - | chr7.2:24511637-24511656 | MS.gene55026:intron | 35.0% | |
| GTTCTCTTGTTCTTGAAGTA+GGG | + | chr7.2:24510170-24510189 | None:intergenic | 35.0% | |
| TAAGGAGTTGTTGAACAGAT+CGG | + | chr7.2:24508803-24508822 | None:intergenic | 35.0% | |
| TAGAGGATTGCAATTCAAGA+AGG | - | chr7.2:24508848-24508867 | MS.gene55026:CDS | 35.0% | |
| TATATATGATCTGGAAGGAG+AGG | - | chr7.2:24508751-24508770 | MS.gene55026:CDS | 35.0% | |
| TATGCATCAAGCTCATAGAA+TGG | - | chr7.2:24508713-24508732 | MS.gene55026:CDS | 35.0% | |
| TCAAATGTCCTAACAAGAAG+AGG | + | chr7.2:24509432-24509451 | None:intergenic | 35.0% | |
| TCTCCTTCCAGATCATATAT+AGG | + | chr7.2:24508752-24508771 | None:intergenic | 35.0% | |
| TGATGCTTCGATTTCTTTCT+CGG | + | chr7.2:24510526-24510545 | None:intergenic | 35.0% | |
| TGGTCAAAGAAATGGAGAAA+AGG | - | chr7.2:24510835-24510854 | MS.gene55026:CDS | 35.0% | |
| TTGTGATTGTTGTGCGATAT+CGG | - | chr7.2:24509112-24509131 | MS.gene55026:CDS | 35.0% | |
| ! | AACAACTGAAGCTTTAGCTT+TGG | - | chr7.2:24511355-24511374 | MS.gene55026:intron | 35.0% |
| ! | AGAACAAGTACTTGCTGAAT+TGG | - | chr7.2:24510614-24510633 | MS.gene55026:intron | 35.0% |
| ! | ATTTGAGATTGATACGAGTG+AGG | - | chr7.2:24511292-24511311 | MS.gene55026:intron | 35.0% |
| ! | CTCTTGTGTCTTTGTTTAGT+TGG | - | chr7.2:24508936-24508955 | MS.gene55026:CDS | 35.0% |
| ! | TTTTTGCTTAGGACCACTTT+TGG | + | chr7.2:24509289-24509308 | None:intergenic | 35.0% |
| !! | ACGAATCGTTTTTCTTCAAG+CGG | + | chr7.2:24511067-24511086 | None:intergenic | 35.0% |
| !! | ATAGAAGCACTAGAGAAGAA+GGG | - | chr7.2:24510357-24510376 | MS.gene55026:CDS | 35.0% |
| AAGAAGGGAAAAGGTCAACA+TGG | - | chr7.2:24510372-24510391 | MS.gene55026:CDS | 40.0% | |
| AAGCAAATACCATACCTGAG+AGG | + | chr7.2:24509518-24509537 | None:intergenic | 40.0% | |
| AAGCTAGAAGAGACATTGGA+AGG | - | chr7.2:24510196-24510215 | MS.gene55026:CDS | 40.0% | |
| ACGAGTGAGGAAAAATTGCA+AGG | - | chr7.2:24511305-24511324 | MS.gene55026:intron | 40.0% | |
| AGGTGCAAACTCTGATGAAT+CGG | - | chr7.2:24508868-24508887 | MS.gene55026:CDS | 40.0% | |
| ATAGCTTCCACAAGCTTTCT+AGG | - | chr7.2:24509918-24509937 | MS.gene55026:CDS | 40.0% | |
| CTCCTTTACGGTTTGTAACT+CGG | + | chr7.2:24510931-24510950 | None:intergenic | 40.0% | |
| GAAATGGAGAAAAGGGTTCA+AGG | - | chr7.2:24510843-24510862 | MS.gene55026:CDS | 40.0% | |
| GACCCTATATATGATCTGGA+AGG | - | chr7.2:24508746-24508765 | MS.gene55026:CDS | 40.0% | |
| GGAATCAAGTTACAAGGCTA+AGG | - | chr7.2:24510320-24510339 | MS.gene55026:CDS | 40.0% | |
| GGTCCTTCACTTATTTGTGA+AGG | - | chr7.2:24509133-24509152 | MS.gene55026:CDS | 40.0% | |
| GTTTAAGCTAAAGCTTGACG+TGG | - | chr7.2:24510473-24510492 | MS.gene55026:intron | 40.0% | |
| TACCGAGTTACAAACCGTAA+AGG | - | chr7.2:24510926-24510945 | MS.gene55026:intron | 40.0% | |
| TGCACAAGTGATGAGAGAAT+TGG | - | chr7.2:24510431-24510450 | MS.gene55026:CDS | 40.0% | |
| TTAAGAAAAGGCGACGAATC+AGG | - | chr7.2:24510897-24510916 | MS.gene55026:intron | 40.0% | |
| ! | AAAAGGTCAACATGGTGCTA+TGG | - | chr7.2:24510380-24510399 | MS.gene55026:CDS | 40.0% |
| ! | CCATCTTTTGCCAAAACTGA+AGG | + | chr7.2:24509708-24509727 | None:intergenic | 40.0% |
| ! | CTGTTTTGCAAGAGAAATCG+CGG | - | chr7.2:24510499-24510518 | MS.gene55026:intron | 40.0% |
| ! | GAAGGTACAAAGAGAGTAGA+TGG | - | chr7.2:24510214-24510233 | MS.gene55026:CDS | 40.0% |
| ! | TATCAATGACTGGTTGTGAC+TGG | + | chr7.2:24509402-24509421 | None:intergenic | 40.0% |
| ! | TGATTTGTCTATCTCTTCCG+TGG | + | chr7.2:24510748-24510767 | None:intergenic | 40.0% |
| ! | TGTTTTGCAAGAGAAATCGC+GGG | - | chr7.2:24510500-24510519 | MS.gene55026:intron | 40.0% |
| ! | TTCCAATGTCTCTTCTAGCT+TGG | + | chr7.2:24510197-24510216 | None:intergenic | 40.0% |
| !! | AACATGGTGCTATGGTTGTA+AGG | - | chr7.2:24510388-24510407 | MS.gene55026:CDS | 40.0% |
| !! | CATAGAAGCACTAGAGAAGA+AGG | - | chr7.2:24510356-24510375 | MS.gene55026:CDS | 40.0% |
| !! | CCTTCAGTTTTGGCAAAAGA+TGG | - | chr7.2:24509705-24509724 | MS.gene55026:CDS | 40.0% |
| !! | CGAATCGTTTTTCTTCAAGC+GGG | + | chr7.2:24511066-24511085 | None:intergenic | 40.0% |
| !! | GATTGAGGCTTTGAAAGAGT+TGG | - | chr7.2:24510641-24510660 | MS.gene55026:intron | 40.0% |
| AACCGTAAAGGAGGAACTTG+AGG | - | chr7.2:24510938-24510957 | MS.gene55026:intron | 45.0% | |
| AATCACAGTCTCAACCTCTC+AGG | - | chr7.2:24509501-24509520 | MS.gene55026:CDS | 45.0% | |
| ATGTCCTAACAAGAAGAGGG+AGG | + | chr7.2:24509428-24509447 | None:intergenic | 45.0% | |
| CAAGGCTAAGGCGAAAATGA+AGG | - | chr7.2:24510332-24510351 | MS.gene55026:CDS | 45.0% | |
| CACCAAGCTAGAAGAGACAT+TGG | - | chr7.2:24510192-24510211 | MS.gene55026:CDS | 45.0% | |
| CGAGCTGAAGCATGTAACTA+AGG | - | chr7.2:24511034-24511053 | MS.gene55026:intron | 45.0% | |
| CGAGTTACAAACCGTAAAGG+AGG | - | chr7.2:24510929-24510948 | MS.gene55026:intron | 45.0% | |
| CTCTTTCAAAGCCTCAATCC+TGG | + | chr7.2:24510640-24510659 | None:intergenic | 45.0% | |
| GAGCGAGAAGGAAATACTAC+TGG | - | chr7.2:24511559-24511578 | MS.gene55026:intron | 45.0% | |
| GCACTAGAGAAGAAGGGAAA+AGG | - | chr7.2:24510363-24510382 | MS.gene55026:CDS | 45.0% | |
| GCGTGACCCTATATATGATC+TGG | - | chr7.2:24508742-24508761 | MS.gene55026:CDS | 45.0% | |
| GGTGCAAACTCTGATGAATC+GGG | - | chr7.2:24508869-24508888 | MS.gene55026:CDS | 45.0% | |
| TAAAAAAGTTGCGGCAGCTG+AGG | - | chr7.2:24511514-24511533 | MS.gene55026:intron | 45.0% | |
| TGAGAGGTTGAGACTGTGAT+TGG | + | chr7.2:24509502-24509521 | None:intergenic | 45.0% | |
| TGCAAGAAGAGTTAGCAGTG+AGG | - | chr7.2:24511661-24511680 | MS.gene55026:intron | 45.0% | |
| TGTCCTAACAAGAAGAGGGA+GGG | + | chr7.2:24509427-24509446 | None:intergenic | 45.0% | |
| ! | AAATCGAAGCATCAAGCTCG+AGG | - | chr7.2:24510532-24510551 | MS.gene55026:intron | 45.0% |
| ! | AAGTACTTGCTGAATTGGCC+AGG | - | chr7.2:24510619-24510638 | MS.gene55026:intron | 45.0% |
| ! | GAAAACTCAGATGGACTTCG+AGG | - | chr7.2:24509828-24509847 | MS.gene55026:CDS | 45.0% |
| ! | GCAAGGCGTTATGAAAGAGT+TGG | - | chr7.2:24511322-24511341 | MS.gene55026:intron | 45.0% |
| ! | TTTTTCCTCTGCAGCAGATG+CGG | + | chr7.2:24511141-24511160 | None:intergenic | 45.0% |
| !! | ATGGTGCTATGGTTGTAAGG+AGG | - | chr7.2:24510391-24510410 | MS.gene55026:CDS | 45.0% |
| !! | CATTTTGAAGGAAGAGAGGG+AGG | - | chr7.2:24511616-24511635 | MS.gene55026:intron | 45.0% |
| !! | TGAGGCTTTGAAAGAGTTGG+AGG | - | chr7.2:24510644-24510663 | MS.gene55026:intron | 45.0% |
| !!! | TGACTGGTTGTGACTGGTTT+TGG | + | chr7.2:24509396-24509415 | None:intergenic | 45.0% |
| !!! | TTTTATCTTTATATATATTT+AGG | + | chr7.2:24509334-24509353 | None:intergenic | 5.0% |
| ACTCCCTCCCTCTTCTTGTT+AGG | - | chr7.2:24509421-24509440 | MS.gene55026:CDS | 50.0% | |
| CAGTCTCAACCTCTCAGGTA+TGG | - | chr7.2:24509506-24509525 | MS.gene55026:CDS | 50.0% | |
| CGCCTCAAGTTCCTCCTTTA+CGG | + | chr7.2:24510943-24510962 | None:intergenic | 50.0% | |
| CGTAAAGGAGGAACTTGAGG+CGG | - | chr7.2:24510941-24510960 | MS.gene55026:intron | 50.0% | |
| TGCTGAATTGGCCAGGATTG+AGG | - | chr7.2:24510626-24510645 | MS.gene55026:intron | 50.0% | |
| TTCTGCTGCAGCTGCATGAT+TGG | + | chr7.2:24511483-24511502 | None:intergenic | 50.0% | |
| ! | AACTCAGATGGACTTCGAGG+CGG | - | chr7.2:24509831-24509850 | MS.gene55026:CDS | 50.0% |
| !! | AGGGAGGGAGTATCAATGAC+TGG | + | chr7.2:24509412-24509431 | None:intergenic | 50.0% |
| ACTCTGATGAATCGGGTGCG+AGG | - | chr7.2:24508876-24508895 | MS.gene55026:CDS | 55.0% | |
| GGACTAATGTGCCGAGTTGC+AGG | + | chr7.2:24511812-24511831 | None:intergenic | 55.0% | |
| ! | CTGCTGCTTCACCTGCAACT+CGG | - | chr7.2:24511798-24511817 | MS.gene55026:intron | 55.0% |
| ! | CTTCGAGGCGGATTTCTCAG+CGG | - | chr7.2:24509843-24509862 | MS.gene55026:CDS | 55.0% |
| ! | GGCATGGATTGAAGCGCTCA+AGG | - | chr7.2:24511535-24511554 | MS.gene55026:intron | 55.0% |
| AAGTTGCGGCAGCTGAGGCA+TGG | - | chr7.2:24511519-24511538 | MS.gene55026:intron | 60.0% | |
| AGAAGCCGCATCTGCTGCAG+AGG | - | chr7.2:24511133-24511152 | MS.gene55026:intron | 60.0% | |
| AGCGCTCAAGGCGAGCGAGA+AGG | - | chr7.2:24511547-24511566 | MS.gene55026:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 24508709 | 24511916 | 24508709 | ID=MS.gene55026 |
| chr7.2 | mRNA | 24508709 | 24511916 | 24508709 | ID=MS.gene55026.t1;Parent=MS.gene55026 |
| chr7.2 | exon | 24511914 | 24511916 | 24511914 | ID=MS.gene55026.t1.exon1;Parent=MS.gene55026.t1 |
| chr7.2 | CDS | 24511914 | 24511916 | 24511914 | ID=cds.MS.gene55026.t1;Parent=MS.gene55026.t1 |
| chr7.2 | exon | 24510761 | 24510913 | 24510761 | ID=MS.gene55026.t1.exon2;Parent=MS.gene55026.t1 |
| chr7.2 | CDS | 24510761 | 24510913 | 24510761 | ID=cds.MS.gene55026.t1;Parent=MS.gene55026.t1 |
| chr7.2 | exon | 24508709 | 24510460 | 24508709 | ID=MS.gene55026.t1.exon3;Parent=MS.gene55026.t1 |
| chr7.2 | CDS | 24508709 | 24510460 | 24508709 | ID=cds.MS.gene55026.t1;Parent=MS.gene55026.t1 |
| Gene Sequence |
| Protein sequence |
