Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66884.t1 | XP_013442522.1 | 98.9 | 271 | 3 | 0 | 1 | 271 | 80 | 350 | 8.30E-155 | 556.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66884.t1 | Q94F00 | 86.0 | 271 | 38 | 0 | 1 | 271 | 101 | 371 | 4.9e-140 | 498.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66884.t1 | A0A072TGR0 | 98.9 | 271 | 3 | 0 | 1 | 271 | 80 | 350 | 6.0e-155 | 556.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene66884 | 0.827775 | 1.30E-54 | -1.69E-46 |
MS.gene049151 | MS.gene66884 | 0.802894 | 4.52E-49 | -1.69E-46 |
MS.gene049153 | MS.gene66884 | 0.815572 | 8.63E-52 | -1.69E-46 |
MS.gene049260 | MS.gene66884 | 0.851633 | 7.81E-61 | -1.69E-46 |
MS.gene049346 | MS.gene66884 | 0.808929 | 2.43E-50 | -1.69E-46 |
MS.gene049351 | MS.gene66884 | 0.802075 | 6.66E-49 | -1.69E-46 |
MS.gene049378 | MS.gene66884 | 0.828798 | 7.36E-55 | -1.69E-46 |
MS.gene049389 | MS.gene66884 | 0.810449 | 1.15E-50 | -1.69E-46 |
MS.gene049599 | MS.gene66884 | -0.846894 | 1.63E-59 | -1.69E-46 |
MS.gene049662 | MS.gene66884 | 0.80163 | 8.23E-49 | -1.69E-46 |
MS.gene049758 | MS.gene66884 | 0.919493 | 4.20E-87 | -1.69E-46 |
MS.gene049910 | MS.gene66884 | 0.833208 | 6.08E-56 | -1.69E-46 |
MS.gene049915 | MS.gene66884 | 0.829544 | 4.85E-55 | -1.69E-46 |
MS.gene050128 | MS.gene66884 | 0.836007 | 1.20E-56 | -1.69E-46 |
MS.gene050226 | MS.gene66884 | 0.808656 | 2.78E-50 | -1.69E-46 |
MS.gene050227 | MS.gene66884 | 0.814807 | 1.28E-51 | -1.69E-46 |
MS.gene050228 | MS.gene66884 | 0.808255 | 3.39E-50 | -1.69E-46 |
MS.gene050301 | MS.gene66884 | 0.878136 | 3.58E-69 | -1.69E-46 |
MS.gene050319 | MS.gene66884 | -0.844695 | 6.45E-59 | -1.69E-46 |
MS.gene050330 | MS.gene66884 | -0.836131 | 1.12E-56 | -1.69E-46 |
MS.gene050397 | MS.gene66884 | 0.821595 | 3.71E-53 | -1.69E-46 |
MS.gene050438 | MS.gene66884 | 0.805709 | 1.17E-49 | -1.69E-46 |
MS.gene050464 | MS.gene66884 | 0.805877 | 1.08E-49 | -1.69E-46 |
MS.gene050529 | MS.gene66884 | 0.813865 | 2.06E-51 | -1.69E-46 |
MS.gene050558 | MS.gene66884 | 0.851882 | 6.65E-61 | -1.69E-46 |
MS.gene050623 | MS.gene66884 | -0.831948 | 1.25E-55 | -1.69E-46 |
MS.gene050642 | MS.gene66884 | 0.82385 | 1.11E-53 | -1.69E-46 |
MS.gene050762 | MS.gene66884 | 0.810856 | 9.36E-51 | -1.69E-46 |
MS.gene050763 | MS.gene66884 | 0.813336 | 2.70E-51 | -1.69E-46 |
MS.gene050820 | MS.gene66884 | 0.800804 | 1.21E-48 | -1.69E-46 |
MS.gene05101 | MS.gene66884 | 0.834277 | 3.29E-56 | -1.69E-46 |
MS.gene05119 | MS.gene66884 | -0.871092 | 8.89E-67 | -1.69E-46 |
MS.gene051471 | MS.gene66884 | 0.823589 | 1.28E-53 | -1.69E-46 |
MS.gene051662 | MS.gene66884 | 0.832009 | 1.21E-55 | -1.69E-46 |
MS.gene051663 | MS.gene66884 | 0.852159 | 5.54E-61 | -1.69E-46 |
MS.gene051860 | MS.gene66884 | 0.851502 | 8.51E-61 | -1.69E-46 |
MS.gene051983 | MS.gene66884 | 0.849001 | 4.28E-60 | -1.69E-46 |
MS.gene052025 | MS.gene66884 | 0.81301 | 3.18E-51 | -1.69E-46 |
MS.gene052077 | MS.gene66884 | 0.83583 | 1.34E-56 | -1.69E-46 |
MS.gene052078 | MS.gene66884 | 0.833713 | 4.55E-56 | -1.69E-46 |
MS.gene052176 | MS.gene66884 | 0.803013 | 4.27E-49 | -1.69E-46 |
MS.gene052178 | MS.gene66884 | 0.833504 | 5.14E-56 | -1.69E-46 |
MS.gene052188 | MS.gene66884 | 0.848379 | 6.36E-60 | -1.69E-46 |
MS.gene052207 | MS.gene66884 | 0.854076 | 1.57E-61 | -1.69E-46 |
MS.gene052253 | MS.gene66884 | 0.810671 | 1.03E-50 | -1.69E-46 |
MS.gene052309 | MS.gene66884 | -0.820346 | 7.20E-53 | -1.69E-46 |
MS.gene052310 | MS.gene66884 | 0.80555 | 1.26E-49 | -1.69E-46 |
MS.gene052340 | MS.gene66884 | 0.843493 | 1.35E-58 | -1.69E-46 |
MS.gene053073 | MS.gene66884 | 0.808153 | 3.56E-50 | -1.69E-46 |
MS.gene053209 | MS.gene66884 | 0.865841 | 4.41E-65 | -1.69E-46 |
MS.gene053557 | MS.gene66884 | 0.831824 | 1.34E-55 | -1.69E-46 |
MS.gene053559 | MS.gene66884 | 0.826709 | 2.34E-54 | -1.69E-46 |
MS.gene053577 | MS.gene66884 | 0.808395 | 3.16E-50 | -1.69E-46 |
MS.gene053630 | MS.gene66884 | 0.807398 | 5.16E-50 | -1.69E-46 |
MS.gene053836 | MS.gene66884 | 0.910364 | 2.03E-82 | -1.69E-46 |
MS.gene053907 | MS.gene66884 | 0.819949 | 8.88E-53 | -1.69E-46 |
MS.gene054011 | MS.gene66884 | 0.802351 | 5.85E-49 | -1.69E-46 |
MS.gene054123 | MS.gene66884 | 0.800843 | 1.19E-48 | -1.69E-46 |
MS.gene054379 | MS.gene66884 | 0.81511 | 1.09E-51 | -1.69E-46 |
MS.gene054473 | MS.gene66884 | 0.859425 | 4.17E-63 | -1.69E-46 |
MS.gene054542 | MS.gene66884 | 0.829983 | 3.79E-55 | -1.69E-46 |
MS.gene054667 | MS.gene66884 | 0.829599 | 4.70E-55 | -1.69E-46 |
MS.gene054930 | MS.gene66884 | 0.884416 | 1.95E-71 | -1.69E-46 |
MS.gene054942 | MS.gene66884 | 0.810299 | 1.23E-50 | -1.69E-46 |
MS.gene054983 | MS.gene66884 | 0.832988 | 6.90E-56 | -1.69E-46 |
MS.gene055116 | MS.gene66884 | 0.829776 | 4.26E-55 | -1.69E-46 |
MS.gene055133 | MS.gene66884 | 0.817142 | 3.84E-52 | -1.69E-46 |
MS.gene055277 | MS.gene66884 | 0.865664 | 5.01E-65 | -1.69E-46 |
MS.gene055390 | MS.gene66884 | 0.840193 | 1.01E-57 | -1.69E-46 |
MS.gene055422 | MS.gene66884 | 0.881532 | 2.22E-70 | -1.69E-46 |
MS.gene055428 | MS.gene66884 | 0.860176 | 2.48E-63 | -1.69E-46 |
MS.gene055509 | MS.gene66884 | 0.800351 | 1.50E-48 | -1.69E-46 |
MS.gene055604 | MS.gene66884 | 0.838424 | 2.90E-57 | -1.69E-46 |
MS.gene055712 | MS.gene66884 | 0.854984 | 8.55E-62 | -1.69E-46 |
MS.gene055859 | MS.gene66884 | 0.843642 | 1.24E-58 | -1.69E-46 |
MS.gene056069 | MS.gene66884 | -0.858378 | 8.59E-63 | -1.69E-46 |
MS.gene056407 | MS.gene66884 | 0.832161 | 1.11E-55 | -1.69E-46 |
MS.gene056447 | MS.gene66884 | 0.800712 | 1.27E-48 | -1.69E-46 |
MS.gene056612 | MS.gene66884 | 0.85626 | 3.63E-62 | -1.69E-46 |
MS.gene056659 | MS.gene66884 | 0.82087 | 5.46E-53 | -1.69E-46 |
MS.gene056979 | MS.gene66884 | 0.849892 | 2.42E-60 | -1.69E-46 |
MS.gene05702 | MS.gene66884 | 0.839573 | 1.46E-57 | -1.69E-46 |
MS.gene057121 | MS.gene66884 | 0.856151 | 3.90E-62 | -1.69E-46 |
MS.gene057245 | MS.gene66884 | 0.832104 | 1.14E-55 | -1.69E-46 |
MS.gene057260 | MS.gene66884 | 0.803299 | 3.72E-49 | -1.69E-46 |
MS.gene057439 | MS.gene66884 | 0.870355 | 1.55E-66 | -1.69E-46 |
MS.gene057448 | MS.gene66884 | 0.852131 | 5.65E-61 | -1.69E-46 |
MS.gene057449 | MS.gene66884 | 0.829861 | 4.06E-55 | -1.69E-46 |
MS.gene057450 | MS.gene66884 | 0.85974 | 3.36E-63 | -1.69E-46 |
MS.gene057469 | MS.gene66884 | 0.842611 | 2.33E-58 | -1.69E-46 |
MS.gene057754 | MS.gene66884 | 0.827732 | 1.33E-54 | -1.69E-46 |
MS.gene057796 | MS.gene66884 | 0.804314 | 2.29E-49 | -1.69E-46 |
MS.gene058002 | MS.gene66884 | 0.859881 | 3.04E-63 | -1.69E-46 |
MS.gene058082 | MS.gene66884 | 0.849269 | 3.60E-60 | -1.69E-46 |
MS.gene05811 | MS.gene66884 | 0.857246 | 1.86E-62 | -1.69E-46 |
MS.gene058142 | MS.gene66884 | 0.839373 | 1.65E-57 | -1.69E-46 |
MS.gene058182 | MS.gene66884 | 0.811652 | 6.29E-51 | -1.69E-46 |
MS.gene058201 | MS.gene66884 | 0.808005 | 3.83E-50 | -1.69E-46 |
MS.gene058433 | MS.gene66884 | 0.804524 | 2.07E-49 | -1.69E-46 |
MS.gene058660 | MS.gene66884 | 0.828878 | 7.04E-55 | -1.69E-46 |
MS.gene058661 | MS.gene66884 | -0.800216 | 1.60E-48 | -1.69E-46 |
MS.gene058710 | MS.gene66884 | 0.841991 | 3.40E-58 | -1.69E-46 |
MS.gene058749 | MS.gene66884 | 0.858351 | 8.74E-63 | -1.69E-46 |
MS.gene058845 | MS.gene66884 | 0.846816 | 1.71E-59 | -1.69E-46 |
MS.gene05886 | MS.gene66884 | 0.832378 | 9.78E-56 | -1.69E-46 |
MS.gene058949 | MS.gene66884 | 0.801317 | 9.53E-49 | -1.69E-46 |
MS.gene059033 | MS.gene66884 | -0.815612 | 8.46E-52 | -1.69E-46 |
MS.gene05907 | MS.gene66884 | 0.858325 | 8.90E-63 | -1.69E-46 |
MS.gene059228 | MS.gene66884 | 0.824341 | 8.51E-54 | -1.69E-46 |
MS.gene059285 | MS.gene66884 | 0.854843 | 9.39E-62 | -1.69E-46 |
MS.gene059342 | MS.gene66884 | 0.821074 | 4.90E-53 | -1.69E-46 |
MS.gene059518 | MS.gene66884 | 0.852617 | 4.11E-61 | -1.69E-46 |
MS.gene059597 | MS.gene66884 | 0.829111 | 6.18E-55 | -1.69E-46 |
MS.gene05959 | MS.gene66884 | 0.806128 | 9.56E-50 | -1.69E-46 |
MS.gene059676 | MS.gene66884 | 0.817877 | 2.62E-52 | -1.69E-46 |
MS.gene059688 | MS.gene66884 | 0.838253 | 3.21E-57 | -1.69E-46 |
MS.gene059692 | MS.gene66884 | 0.846627 | 1.93E-59 | -1.69E-46 |
MS.gene059695 | MS.gene66884 | 0.838108 | 3.50E-57 | -1.69E-46 |
MS.gene05984 | MS.gene66884 | 0.871547 | 6.29E-67 | -1.69E-46 |
MS.gene059894 | MS.gene66884 | 0.86574 | 4.74E-65 | -1.69E-46 |
MS.gene059899 | MS.gene66884 | 0.874336 | 7.31E-68 | -1.69E-46 |
MS.gene06037 | MS.gene66884 | 0.853968 | 1.68E-61 | -1.69E-46 |
MS.gene060476 | MS.gene66884 | 0.835609 | 1.52E-56 | -1.69E-46 |
MS.gene060495 | MS.gene66884 | 0.813336 | 2.70E-51 | -1.69E-46 |
MS.gene061049 | MS.gene66884 | 0.877955 | 4.15E-69 | -1.69E-46 |
MS.gene061051 | MS.gene66884 | -0.846494 | 2.10E-59 | -1.69E-46 |
MS.gene061112 | MS.gene66884 | 0.806244 | 9.04E-50 | -1.69E-46 |
MS.gene061113 | MS.gene66884 | 0.805002 | 1.65E-49 | -1.69E-46 |
MS.gene061265 | MS.gene66884 | 0.80922 | 2.11E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66884.t1 | MTR_0151s0030 | 98.893 | 271 | 3 | 0 | 1 | 271 | 80 | 350 | 0.0 | 557 |
MS.gene66884.t1 | MTR_2g026060 | 34.400 | 250 | 151 | 6 | 1 | 244 | 25 | 267 | 1.14e-38 | 136 |
MS.gene66884.t1 | MTR_3g117220 | 25.806 | 217 | 142 | 5 | 11 | 222 | 91 | 293 | 3.58e-14 | 71.6 |
MS.gene66884.t1 | MTR_3g117220 | 26.364 | 220 | 137 | 6 | 11 | 222 | 91 | 293 | 3.59e-14 | 71.6 |
MS.gene66884.t1 | MTR_3g117220 | 37.349 | 83 | 51 | 1 | 11 | 92 | 91 | 173 | 2.75e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66884.t1 | AT1G31190 | 85.978 | 271 | 38 | 0 | 1 | 271 | 101 | 371 | 1.75e-180 | 501 |
MS.gene66884.t1 | AT3G02870 | 34.800 | 250 | 150 | 6 | 1 | 244 | 21 | 263 | 2.78e-39 | 138 |
MS.gene66884.t1 | AT3G02870 | 34.800 | 250 | 150 | 6 | 1 | 244 | 24 | 266 | 3.13e-39 | 138 |
MS.gene66884.t1 | AT3G02870 | 34.000 | 250 | 150 | 7 | 1 | 244 | 24 | 264 | 4.32e-36 | 130 |
MS.gene66884.t1 | AT4G39120 | 28.889 | 225 | 145 | 5 | 1 | 222 | 100 | 312 | 1.67e-19 | 87.0 |
MS.gene66884.t1 | AT4G39120 | 28.889 | 225 | 145 | 5 | 1 | 222 | 129 | 341 | 2.57e-19 | 87.0 |
Find 67 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGGAATTGTAGAAGCTTAT+TGG | 0.200657 | 2.3:+38034448 | MS.gene66884:CDS |
TCTCTTCTAGTGACAGGTTT+TGG | 0.218112 | 2.3:+38034231 | MS.gene66884:CDS |
AGAATTATTCAAAGAATTTA+CGG | 0.259184 | 2.3:+38034287 | MS.gene66884:CDS |
TTTGAAGATCATCTTATTCT+TGG | 0.263391 | 2.3:+38031707 | MS.gene66884:CDS |
GGGGAAGAAGGAGGCATTAT+AGG | 0.301861 | 2.3:+38031728 | MS.gene66884:CDS |
CCAAGGGATATTACGTATAA+AGG | 0.307417 | 2.3:+38031495 | MS.gene66884:CDS |
GGGAATTGTAGAAGCTTATT+GGG | 0.311951 | 2.3:+38034449 | MS.gene66884:CDS |
GGATATGGCTGCTGGTGTTT+TGG | 0.334606 | 2.3:+38034491 | MS.gene66884:CDS |
TTGAAGATCATCTTATTCTT+GGG | 0.339310 | 2.3:+38031708 | MS.gene66884:CDS |
GGACATGTGTCATGTGGCTT+TGG | 0.346148 | 2.3:+38034428 | MS.gene66884:CDS |
CCCAGCTTTGCTGTTTCTGT+TGG | 0.353190 | 2.3:+38032351 | MS.gene66884:CDS |
TCACAGCTTCTGGAGAGAAT+TGG | 0.358423 | 2.3:+38036230 | MS.gene66884:intron |
TTGCACTCACTTCGATCCTT+TGG | 0.364627 | 2.3:-38034069 | None:intergenic |
TCGTCTAAAGCCATGGGATA+TGG | 0.366268 | 2.3:+38034476 | MS.gene66884:CDS |
TAATTTCAGGTTGAGTTTGT+TGG | 0.386912 | 2.3:+38033838 | MS.gene66884:intron |
GACATGTGTCATGTGGCTTT+GGG | 0.387052 | 2.3:+38034429 | MS.gene66884:CDS |
CGAAGTGAGTGCAACTAATC+AGG | 0.390231 | 2.3:+38034078 | MS.gene66884:CDS |
CTCTGGTGCATTGATCCCTT+AGG | 0.393019 | 2.3:+38031770 | MS.gene66884:CDS |
TCCAACAGAAACAGCAAAGC+TGG | 0.410104 | 2.3:-38032352 | None:intergenic |
CATCTTATTCTTGGGGAAGA+AGG | 0.419054 | 2.3:+38031716 | MS.gene66884:CDS |
GGTATGAACACGATGAAGCC+TGG | 0.422749 | 2.3:+38034253 | MS.gene66884:CDS |
AAGAATTTACGGATGTCAGC+AGG | 0.448133 | 2.3:+38034298 | MS.gene66884:CDS |
CCTTTATACGTAATATCCCT+TGG | 0.454380 | 2.3:-38031495 | None:intergenic |
GAGAATTGGACCTGCAACAG+AGG | 0.468618 | 2.3:+38036244 | MS.gene66884:CDS |
TAATTCTATGTTAGTAGCCC+AGG | 0.475569 | 2.3:-38034271 | None:intergenic |
ATCAATGCACCAGAGATAAT+CGG | 0.477276 | 2.3:-38031762 | None:intergenic |
TTTCAGGTTGAGTTTGTTGG+TGG | 0.480206 | 2.3:+38033841 | MS.gene66884:intron |
ATGTAGCTTCCGATTATCTC+TGG | 0.495237 | 2.3:+38031753 | MS.gene66884:CDS |
ACGTCAGCTCTGTAGTCCTC+AGG | 0.500123 | 2.3:-38036308 | None:intergenic |
GGCACAGTCTCTCGGATGGA+TGG | 0.502346 | 2.3:+38035077 | MS.gene66884:CDS |
GGGAATATCGTCTAAAGCCA+TGG | 0.516658 | 2.3:+38034469 | MS.gene66884:CDS |
AAGCTGGTGGCACAGTCTCT+CGG | 0.522324 | 2.3:+38035069 | MS.gene66884:CDS |
TTGTTGGTGGTCCTATGTGT+TGG | 0.522702 | 2.3:+38033854 | MS.gene66884:CDS |
GAGCATTCTGCAACGGCCAA+AGG | 0.523515 | 2.3:+38034053 | MS.gene66884:CDS |
TTATAGATGGTAGAGGAAGC+TGG | 0.525422 | 2.3:+38035053 | MS.gene66884:intron |
CATTAATTTATAGATGGTAG+AGG | 0.538600 | 2.3:+38035046 | MS.gene66884:intron |
AAATCCTACTGCTGCTACAG+TGG | 0.541368 | 2.3:+38032389 | MS.gene66884:CDS |
GAACGATCTCTTCTAGTGAC+AGG | 0.541726 | 2.3:+38034225 | MS.gene66884:CDS |
AAGCCATGGGATATGGCTGC+TGG | 0.542409 | 2.3:+38034483 | MS.gene66884:CDS |
ACGGCTTGGTGCAGCTGCTG+TGG | 0.552919 | 2.3:+38034407 | MS.gene66884:CDS |
TGAAGATCATCTTATTCTTG+GGG | 0.571098 | 2.3:+38031709 | MS.gene66884:CDS |
ATCAGAGACTAACCTTAGCA+TGG | 0.571478 | 2.3:-38035151 | None:intergenic |
CGAAGCTGCAATATTAGAAG+TGG | 0.573792 | 2.3:+38031673 | MS.gene66884:CDS |
TGGTTATATACAGGTTGTGA+TGG | 0.576021 | 2.3:+38031458 | None:intergenic |
GCTTAGGGTGTAAGACGGCT+TGG | 0.577813 | 2.3:+38034393 | MS.gene66884:intron |
TGCTGTGGACATGTGTCATG+TGG | 0.577937 | 2.3:+38034422 | MS.gene66884:CDS |
CTTATTCTTGGGGAAGAAGG+AGG | 0.578094 | 2.3:+38031719 | MS.gene66884:CDS |
TTGATGCTTAGGGTGTAAGA+CGG | 0.578406 | 2.3:+38034388 | MS.gene66884:intron |
GTATAAAGGATTAACTGACT+TGG | 0.588684 | 2.3:+38031509 | MS.gene66884:CDS |
AAACGGCGTGATCCATGCTA+AGG | 0.590514 | 2.3:+38035139 | MS.gene66884:CDS |
GTATGAACACGATGAAGCCT+GGG | 0.594244 | 2.3:+38034254 | MS.gene66884:CDS |
AGAATTGGACCTGCAACAGA+GGG | 0.598356 | 2.3:+38036245 | MS.gene66884:CDS |
GGAATATCGTCTAAAGCCAT+GGG | 0.599869 | 2.3:+38034470 | MS.gene66884:CDS |
TTCATTATGGTACAAACCTG+AGG | 0.600198 | 2.3:+38036292 | MS.gene66884:CDS |
CCAACAGAAACAGCAAAGCT+GGG | 0.601113 | 2.3:-38032351 | None:intergenic |
TGGATGCTGTTAATAAGCCA+AGG | 0.604018 | 2.3:+38031478 | MS.gene66884:CDS |
GGTGGTGGAGCATTCTGCAA+CGG | 0.608637 | 2.3:+38034046 | MS.gene66884:intron |
TCTGTTGGAGTTCTATATCG+AGG | 0.608905 | 2.3:+38032366 | MS.gene66884:CDS |
AGAATTTACGGATGTCAGCA+GGG | 0.621463 | 2.3:+38034299 | MS.gene66884:CDS |
TGGTGGCACAGTCTCTCGGA+TGG | 0.621555 | 2.3:+38035073 | MS.gene66884:CDS |
ATCACCACTGTAGCAGCAGT+AGG | 0.645561 | 2.3:-38032393 | None:intergenic |
ACACCAGCAGCCATATCCCA+TGG | 0.649403 | 2.3:-38034486 | None:intergenic |
GGATGCTGTTAATAAGCCAA+GGG | 0.650904 | 2.3:+38031479 | MS.gene66884:CDS |
ACAGTCTCTCGGATGGATGG+CGG | 0.651173 | 2.3:+38035080 | MS.gene66884:CDS |
GGGACAACAAACTTTGCACA+TGG | 0.671367 | 2.3:+38032324 | MS.gene66884:CDS |
ATGCGAGTATTCCAACACAT+AGG | 0.693784 | 2.3:-38033865 | None:intergenic |
TAGATGGTAGAGGAAGCTGG+TGG | 0.772384 | 2.3:+38035056 | MS.gene66884:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTTTTTTTTTTTTTAA+AGG | + | chr2.3:38035590-38035609 | MS.gene66884:intron | 0.0% |
!!! | AATTTTTTTTTTTCAAATAG+TGG | - | chr2.3:38033026-38033045 | None:intergenic | 10.0% |
!!! | ATATTCATTTTAGTATAAAT+AGG | - | chr2.3:38033534-38033553 | None:intergenic | 10.0% |
!! | AAAAATTAATGACTGATATA+AGG | - | chr2.3:38032591-38032610 | None:intergenic | 15.0% |
!! | ACTAGAAGAAATAAAAATAA+TGG | + | chr2.3:38034798-38034817 | MS.gene66884:intron | 15.0% |
!! | AGAATTATTCAAAGAATTTA+CGG | + | chr2.3:38034287-38034306 | MS.gene66884:CDS | 15.0% |
!! | AGTTCTATTATTAATAGAAT+TGG | - | chr2.3:38034726-38034745 | None:intergenic | 15.0% |
!! | ATAAATTATTTCAATACAGA+CGG | - | chr2.3:38032220-38032239 | None:intergenic | 15.0% |
!! | CATGTTATATTTGAAAAATT+TGG | + | chr2.3:38033646-38033665 | MS.gene66884:intron | 15.0% |
!! | GTTCTATTATTAATAGAATT+GGG | - | chr2.3:38034725-38034744 | None:intergenic | 15.0% |
!! | TGAAATATAAGTAAAAGATA+CGG | - | chr2.3:38032426-38032445 | None:intergenic | 15.0% |
!!! | AAGAACTTATTTTTGTATAA+TGG | + | chr2.3:38034619-38034638 | MS.gene66884:intron | 15.0% |
!!! | AATAATTTTTAGTTTCTCTA+AGG | - | chr2.3:38033942-38033961 | None:intergenic | 15.0% |
!!! | AATTATTTCTTAAAATGTTG+GGG | - | chr2.3:38031825-38031844 | None:intergenic | 15.0% |
!!! | AGAATTATTTCTTAAAATGT+TGG | - | chr2.3:38031827-38031846 | None:intergenic | 15.0% |
!!! | ATAATTTTTAGTTTCTCTAA+GGG | - | chr2.3:38033941-38033960 | None:intergenic | 15.0% |
!!! | GAATTATTTCTTAAAATGTT+GGG | - | chr2.3:38031826-38031845 | None:intergenic | 15.0% |
!!! | TATTTTTATTTCTTCTAGTT+AGG | - | chr2.3:38034797-38034816 | None:intergenic | 15.0% |
!!! | TCAGTGTTTTTTATTTTTTT+GGG | + | chr2.3:38034168-38034187 | MS.gene66884:intron | 15.0% |
!!! | TTATTAGTTTTATCAATAAC+TGG | + | chr2.3:38033987-38034006 | MS.gene66884:intron | 15.0% |
!!! | TTCAGTGTTTTTTATTTTTT+TGG | + | chr2.3:38034167-38034186 | MS.gene66884:intron | 15.0% |
!!! | TTTTTCCATTAATTTATAGA+TGG | + | chr2.3:38035040-38035059 | MS.gene66884:intron | 15.0% |
!! | AATGAGTTATTATCAATGAA+AGG | - | chr2.3:38032464-38032483 | None:intergenic | 20.0% |
!! | ACAATATGTCAATTACAAAT+TGG | + | chr2.3:38035442-38035461 | MS.gene66884:intron | 20.0% |
!! | ATAGGATTTGTATTAATTTC+AGG | + | chr2.3:38033825-38033844 | MS.gene66884:intron | 20.0% |
!! | ATGTATATTTGAACACAATT+TGG | + | chr2.3:38035661-38035680 | MS.gene66884:intron | 20.0% |
!! | ATTATCAACAATTACTCTTA+AGG | + | chr2.3:38034524-38034543 | MS.gene66884:intron | 20.0% |
!! | ATTTCTTGACAATAAAAATG+AGG | - | chr2.3:38033733-38033752 | None:intergenic | 20.0% |
!! | ATTTGTAATTGACATATTGT+AGG | - | chr2.3:38035442-38035461 | None:intergenic | 20.0% |
!! | TACCATTATATACAATGAAA+AGG | - | chr2.3:38033771-38033790 | None:intergenic | 20.0% |
!! | TCAATTACATAATCAAAACT+TGG | + | chr2.3:38033125-38033144 | MS.gene66884:intron | 20.0% |
!! | TCTATTAATAATAGAACTAC+TGG | + | chr2.3:38034728-38034747 | MS.gene66884:intron | 20.0% |
!! | TTTCTTGACAATAAAAATGA+GGG | - | chr2.3:38033732-38033751 | None:intergenic | 20.0% |
!!! | AAAAGCATATTTACACAATT+TGG | + | chr2.3:38033461-38033480 | MS.gene66884:intron | 20.0% |
!!! | AACAATGAAATGAATAGTTT+TGG | + | chr2.3:38033303-38033322 | MS.gene66884:intron | 20.0% |
!!! | ACAATGAAATGAATAGTTTT+GGG | + | chr2.3:38033304-38033323 | MS.gene66884:intron | 20.0% |
!!! | AGTGTTTTTTATTTTTTTGG+GGG | + | chr2.3:38034170-38034189 | MS.gene66884:intron | 20.0% |
!!! | ATAGTTTTTCAAAACACTTT+AGG | - | chr2.3:38033376-38033395 | None:intergenic | 20.0% |
!!! | ATTTAGTTTTTTTGTGATTG+AGG | + | chr2.3:38036191-38036210 | MS.gene66884:intron | 20.0% |
!!! | CAATCTATTTGATCATATTT+TGG | - | chr2.3:38035927-38035946 | None:intergenic | 20.0% |
!!! | CAGTGTTTTTTATTTTTTTG+GGG | + | chr2.3:38034169-38034188 | MS.gene66884:intron | 20.0% |
!!! | GGAAAAGTAAATTTTTCTAA+TGG | + | chr2.3:38034586-38034605 | MS.gene66884:intron | 20.0% |
!!! | TAATTTTTAGTTTCTCTAAG+GGG | - | chr2.3:38033940-38033959 | None:intergenic | 20.0% |
!!! | TAGTTTTTCAAAACACTTTA+GGG | - | chr2.3:38033375-38033394 | None:intergenic | 20.0% |
!!! | TCTTGTATAATTTTGTAGAT+GGG | + | chr2.3:38032304-38032323 | MS.gene66884:intron | 20.0% |
!!! | TGAATTTTCAAAATGATCAA+AGG | + | chr2.3:38033673-38033692 | MS.gene66884:intron | 20.0% |
!!! | TGATGTTAAATTTCAAGTTA+AGG | - | chr2.3:38032493-38032512 | None:intergenic | 20.0% |
!!! | TTCCTTTTCATTGTATATAA+TGG | + | chr2.3:38033766-38033785 | MS.gene66884:intron | 20.0% |
!!! | TTGTTGACTAAAATGAATTA+AGG | - | chr2.3:38035300-38035319 | None:intergenic | 20.0% |
!!! | TTTAGTTTTTTTGTGATTGA+GGG | + | chr2.3:38036192-38036211 | MS.gene66884:intron | 20.0% |
!!! | TTTTTTTTAAAGGAAAGTCA+TGG | + | chr2.3:38035600-38035619 | MS.gene66884:intron | 20.0% |
! | AAGAGGTTTATTAGGAAATT+AGG | + | chr2.3:38034698-38034717 | MS.gene66884:intron | 25.0% |
! | AAGGTATGAGAATTATATCA+GGG | - | chr2.3:38034023-38034042 | None:intergenic | 25.0% |
! | AATGGTAGATAATGATAGTT+GGG | + | chr2.3:38033784-38033803 | MS.gene66884:intron | 25.0% |
! | ACAAGTTTACTATGTTCTTA+CGG | - | chr2.3:38034929-38034948 | None:intergenic | 25.0% |
! | ACAATGAAACATAAAGTCTA+GGG | + | chr2.3:38033611-38033630 | MS.gene66884:intron | 25.0% |
! | AGAGTCATTTGTAAATTAAC+AGG | + | chr2.3:38031636-38031655 | MS.gene66884:intron | 25.0% |
! | ATATAATTCTCATACCTTGT+AGG | + | chr2.3:38034025-38034044 | MS.gene66884:intron | 25.0% |
! | ATCAAAGTCAAGAAAATGAT+TGG | - | chr2.3:38034373-38034392 | None:intergenic | 25.0% |
! | ATTAATGACTGATATAAGGT+TGG | - | chr2.3:38032587-38032606 | None:intergenic | 25.0% |
! | CAAATTGATCGTTAAAGAAA+AGG | - | chr2.3:38035205-38035224 | None:intergenic | 25.0% |
! | CATTAATTTATAGATGGTAG+AGG | + | chr2.3:38035046-38035065 | MS.gene66884:intron | 25.0% |
! | CTCTACCATCTATAAATTAA+TGG | - | chr2.3:38035048-38035067 | None:intergenic | 25.0% |
! | GAATGAAATTACAAACCTAA+GGG | - | chr2.3:38031788-38031807 | None:intergenic | 25.0% |
! | GACTAAAATGAATTAAGGAA+TGG | - | chr2.3:38035295-38035314 | None:intergenic | 25.0% |
! | TAATCTTCGTATTCGTATAA+AGG | + | chr2.3:38031579-38031598 | MS.gene66884:intron | 25.0% |
! | TAATGGTAGATAATGATAGT+TGG | + | chr2.3:38033783-38033802 | MS.gene66884:intron | 25.0% |
! | TAATTGACATATTGTAGGTT+GGG | - | chr2.3:38035437-38035456 | None:intergenic | 25.0% |
! | TACAATGAAACATAAAGTCT+AGG | + | chr2.3:38033610-38033629 | MS.gene66884:intron | 25.0% |
! | TCATTTGAAGAATAGAGTAA+AGG | - | chr2.3:38032105-38032124 | None:intergenic | 25.0% |
! | TCATTTGTAAATTAACAGGA+CGG | + | chr2.3:38031640-38031659 | MS.gene66884:intron | 25.0% |
! | TGAATGAAATTACAAACCTA+AGG | - | chr2.3:38031789-38031808 | None:intergenic | 25.0% |
! | TGTTCTCATATTTATAGAGA+AGG | - | chr2.3:38033287-38033306 | None:intergenic | 25.0% |
! | TTAACAACAAGAGGTTTATT+AGG | + | chr2.3:38034690-38034709 | MS.gene66884:intron | 25.0% |
! | TTAACATAGCTCAAAATATG+TGG | - | chr2.3:38035814-38035833 | None:intergenic | 25.0% |
! | TTGAAGATCATCTTATTCTT+GGG | + | chr2.3:38031708-38031727 | MS.gene66884:CDS | 25.0% |
! | TTTCTTTAACGATCAATTTG+TGG | + | chr2.3:38035205-38035224 | MS.gene66884:intron | 25.0% |
! | TTTGAAGATCATCTTATTCT+TGG | + | chr2.3:38031707-38031726 | MS.gene66884:CDS | 25.0% |
!! | GTCTTGTATAATTTTGTAGA+TGG | + | chr2.3:38032303-38032322 | MS.gene66884:intron | 25.0% |
!! | TGACTCTTATTTGATTAAAC+AGG | - | chr2.3:38031623-38031642 | None:intergenic | 25.0% |
!! | TTCTATAAAGAAGCTTGTTT+AGG | - | chr2.3:38035345-38035364 | None:intergenic | 25.0% |
!!! | AGGGAATTGATTTTTCATTA+TGG | + | chr2.3:38036279-38036298 | MS.gene66884:CDS | 25.0% |
!!! | AGTTTTTCAAAACACTTTAG+GGG | - | chr2.3:38033374-38033393 | None:intergenic | 25.0% |
!!! | CAATGAAATGAATAGTTTTG+GGG | + | chr2.3:38033305-38033324 | MS.gene66884:intron | 25.0% |
!!! | CAATTCACTTTTGTATTCTA+AGG | - | chr2.3:38034123-38034142 | None:intergenic | 25.0% |
!!! | GGATTGATTTAGATGAATTT+TGG | - | chr2.3:38033052-38033071 | None:intergenic | 25.0% |
!!! | TAAATTTCAAGTTAAGGCAT+AGG | - | chr2.3:38032487-38032506 | None:intergenic | 25.0% |
!!! | TGTTTTTGATAGATCTGTTT+TGG | + | chr2.3:38035112-38035131 | MS.gene66884:CDS | 25.0% |
!!! | TTAATAAAACTTGTTAGAGC+AGG | - | chr2.3:38035240-38035259 | None:intergenic | 25.0% |
!!! | TTAGTTTTTTTGTGATTGAG+GGG | + | chr2.3:38036193-38036212 | MS.gene66884:intron | 25.0% |
!!! | TTATTTTTTTGGGGGAAAAT+CGG | + | chr2.3:38034178-38034197 | MS.gene66884:intron | 25.0% |
AAATAGGTTCGTATGAACAA+GGG | - | chr2.3:38033518-38033537 | None:intergenic | 30.0% | |
AACAGATTCTAGACAGATTA+TGG | + | chr2.3:38033073-38033092 | MS.gene66884:intron | 30.0% | |
AAGAAACTCCAAATTCAAAC+AGG | - | chr2.3:38031907-38031926 | None:intergenic | 30.0% | |
AAGAATAGAGTAAAGGAACT+GGG | - | chr2.3:38032098-38032117 | None:intergenic | 30.0% | |
AATGAGACATGCATTAGTTA+TGG | + | chr2.3:38033223-38033242 | MS.gene66884:intron | 30.0% | |
ACAATCAATACTCTCCTTTA+AGG | + | chr2.3:38034849-38034868 | MS.gene66884:intron | 30.0% | |
ACACAGTTCAAAAGAAAGTT+TGG | - | chr2.3:38033699-38033718 | None:intergenic | 30.0% | |
ACCTTAATCTTTATCCTGTA+GGG | + | chr2.3:38032792-38032811 | MS.gene66884:intron | 30.0% | |
AGAAACTCCAAATTCAAACA+GGG | - | chr2.3:38031906-38031925 | None:intergenic | 30.0% | |
AGTAAGTCACTTAATTGACT+AGG | + | chr2.3:38036135-38036154 | MS.gene66884:intron | 30.0% | |
ATAGAAACAGAGTCATATGT+TGG | + | chr2.3:38035359-38035378 | MS.gene66884:intron | 30.0% | |
ATCGAGAAGCAAAAAACAAA+TGG | - | chr2.3:38032535-38032554 | None:intergenic | 30.0% | |
ATGATATCGATAGATCTTAG+AGG | - | chr2.3:38036037-38036056 | None:intergenic | 30.0% | |
ATGGAATTTAGTGGTGTTTA+TGG | - | chr2.3:38032683-38032702 | None:intergenic | 30.0% | |
ATGGTAGATAATGATAGTTG+GGG | + | chr2.3:38033785-38033804 | MS.gene66884:intron | 30.0% | |
CAAGGTATGAGAATTATATC+AGG | - | chr2.3:38034024-38034043 | None:intergenic | 30.0% | |
CAAGTTTACTATGTTCTTAC+GGG | - | chr2.3:38034928-38034947 | None:intergenic | 30.0% | |
CAATTTGGATAAGTAATGCA+CGG | + | chr2.3:38035676-38035695 | MS.gene66884:intron | 30.0% | |
CACATAATCATAAGATTCCA+TGG | + | chr2.3:38033346-38033365 | MS.gene66884:intron | 30.0% | |
CATGGAATCTTATGATTATG+TGG | - | chr2.3:38033348-38033367 | None:intergenic | 30.0% | |
CTGAAATGATGATATGATCA+AGG | - | chr2.3:38034152-38034171 | None:intergenic | 30.0% | |
CTTGCTTGAATCTCAAAATT+AGG | - | chr2.3:38034550-38034569 | None:intergenic | 30.0% | |
CTTGTGTTAGTTCATAGAAT+AGG | - | chr2.3:38031992-38032011 | None:intergenic | 30.0% | |
GTAATTGACATATTGTAGGT+TGG | - | chr2.3:38035438-38035457 | None:intergenic | 30.0% | |
GTATAAAGGATTAACTGACT+TGG | + | chr2.3:38031509-38031528 | MS.gene66884:CDS | 30.0% | |
TAAATAGGTTCGTATGAACA+AGG | - | chr2.3:38033519-38033538 | None:intergenic | 30.0% | |
TAAGGAATGGATAAAGTAGT+CGG | - | chr2.3:38035282-38035301 | None:intergenic | 30.0% | |
TACAAAGAACACAAGCAAAA+AGG | - | chr2.3:38032132-38032151 | None:intergenic | 30.0% | |
TACCTTAATCTTTATCCTGT+AGG | + | chr2.3:38032791-38032810 | MS.gene66884:intron | 30.0% | |
TAGAAGACTTGCAAATTCAA+AGG | + | chr2.3:38034660-38034679 | MS.gene66884:intron | 30.0% | |
TCAAAATATGTGGATGATGA+AGG | - | chr2.3:38035804-38035823 | None:intergenic | 30.0% | |
TCAAATATGTAAGCTATCCT+AGG | + | chr2.3:38034900-38034919 | MS.gene66884:intron | 30.0% | |
TCAAGAAAATGATTGGTGAA+AGG | - | chr2.3:38034366-38034385 | None:intergenic | 30.0% | |
TCTATGAACTAACACAAGTA+TGG | + | chr2.3:38031994-38032013 | MS.gene66884:intron | 30.0% | |
TCTTAAAATGTTGGGGAAAA+AGG | - | chr2.3:38031818-38031837 | None:intergenic | 30.0% | |
TGAAAGGAAGAACATAATGA+AGG | - | chr2.3:38031955-38031974 | None:intergenic | 30.0% | |
TGAAGATCATCTTATTCTTG+GGG | + | chr2.3:38031709-38031728 | MS.gene66884:CDS | 30.0% | |
TTTCTTGACTTTGATGCTTA+GGG | + | chr2.3:38034378-38034397 | MS.gene66884:intron | 30.0% | |
! | AAATAGATTGTAGCTGACTT+GGG | + | chr2.3:38035937-38035956 | MS.gene66884:intron | 30.0% |
! | AATTTTCTGATGTGTGTGTA+TGG | + | chr2.3:38032904-38032923 | MS.gene66884:intron | 30.0% |
! | ATTTTCTGATGTGTGTGTAT+GGG | + | chr2.3:38032905-38032924 | MS.gene66884:intron | 30.0% |
! | CTTTTCTAGATGGAATTTAG+TGG | - | chr2.3:38032692-38032711 | None:intergenic | 30.0% |
! | GATGAGATATCCTCTAAAAA+GGG | + | chr2.3:38032552-38032571 | MS.gene66884:intron | 30.0% |
! | TAATCTGTCTAGAATCTGTT+AGG | - | chr2.3:38033073-38033092 | None:intergenic | 30.0% |
! | TACTCGCTAATTTTCCATTT+GGG | + | chr2.3:38035896-38035915 | MS.gene66884:intron | 30.0% |
! | TTAATTCTATTTGATAGCCC+TGG | - | chr2.3:38033443-38033462 | None:intergenic | 30.0% |
! | TTTTCTATTGGAGTTGTATG+AGG | + | chr2.3:38032718-38032737 | MS.gene66884:intron | 30.0% |
! | TTTTCTTGACTTTGATGCTT+AGG | + | chr2.3:38034377-38034396 | MS.gene66884:intron | 30.0% |
!! | ACTGATATAAGGTTGGTTTA+TGG | - | chr2.3:38032580-38032599 | None:intergenic | 30.0% |
!! | ATTTGACGACAATAGTTTTG+AGG | - | chr2.3:38035838-38035857 | None:intergenic | 30.0% |
!! | GAAAAGCAGCTATTTTCTAT+TGG | + | chr2.3:38032706-38032725 | MS.gene66884:intron | 30.0% |
!! | TAATTTCAGGTTGAGTTTGT+TGG | + | chr2.3:38033838-38033857 | MS.gene66884:intron | 30.0% |
!!! | AAAATAGCTGCTTTTCTAGA+TGG | - | chr2.3:38032702-38032721 | None:intergenic | 30.0% |
!!! | AGATCTGTTTTGGTATCAAA+CGG | + | chr2.3:38035122-38035141 | MS.gene66884:CDS | 30.0% |
!!! | TAGTTTTTTTGTGATTGAGG+GGG | + | chr2.3:38036194-38036213 | MS.gene66884:intron | 30.0% |
!!! | TTTGACGACAATAGTTTTGA+GGG | - | chr2.3:38035837-38035856 | None:intergenic | 30.0% |
AACAGAGGGCTTAAAAAGTA+AGG | + | chr2.3:38036259-38036278 | MS.gene66884:CDS | 35.0% | |
AATAGGTTCGTATGAACAAG+GGG | - | chr2.3:38033517-38033536 | None:intergenic | 35.0% | |
ACAGAGGGCTTAAAAAGTAA+GGG | + | chr2.3:38036260-38036279 | MS.gene66884:CDS | 35.0% | |
ATACATATAACCGACACATG+TGG | - | chr2.3:38032072-38032091 | None:intergenic | 35.0% | |
ATCAATGCACCAGAGATAAT+CGG | - | chr2.3:38031765-38031784 | None:intergenic | 35.0% | |
CAAAAGGCTGTATATAAGCA+GGG | - | chr2.3:38035557-38035576 | None:intergenic | 35.0% | |
CAAATAGATTGTAGCTGACT+TGG | + | chr2.3:38035936-38035955 | MS.gene66884:intron | 35.0% | |
CCAAGGGATATTACGTATAA+AGG | + | chr2.3:38031495-38031514 | MS.gene66884:CDS | 35.0% | |
CCTTTATACGTAATATCCCT+TGG | - | chr2.3:38031498-38031517 | None:intergenic | 35.0% | |
CTCACATATATGCTCCTTAA+AGG | - | chr2.3:38034866-38034885 | None:intergenic | 35.0% | |
CTTGCAAATTCAAAGGCTTT+AGG | + | chr2.3:38034667-38034686 | MS.gene66884:intron | 35.0% | |
GAACCTGAAACAAGGATAAA+GGG | + | chr2.3:38032979-38032998 | MS.gene66884:intron | 35.0% | |
GAAGAATAGAGTAAAGGAAC+TGG | - | chr2.3:38032099-38032118 | None:intergenic | 35.0% | |
GCAAAACAGGATATGCTAAT+AGG | + | chr2.3:38033807-38033826 | MS.gene66884:intron | 35.0% | |
GCAGACTATAGAATCGTATA+AGG | - | chr2.3:38032617-38032636 | None:intergenic | 35.0% | |
GGGAATTGTAGAAGCTTATT+GGG | + | chr2.3:38034449-38034468 | MS.gene66884:CDS | 35.0% | |
GTATCAATTTGCAACTTGCA+AGG | - | chr2.3:38035323-38035342 | None:intergenic | 35.0% | |
GTGTAACCTTCATTTCTTTC+AGG | + | chr2.3:38034200-38034219 | MS.gene66884:intron | 35.0% | |
GTGTTTATGGAGATTCTACT+GGG | - | chr2.3:38032670-38032689 | None:intergenic | 35.0% | |
TAACCTTCATTTCTTTCAGG+TGG | + | chr2.3:38034203-38034222 | MS.gene66884:intron | 35.0% | |
TAATTCTATGTTAGTAGCCC+AGG | - | chr2.3:38034274-38034293 | None:intergenic | 35.0% | |
TAATTCTCATACCTTGTAGG+TGG | + | chr2.3:38034028-38034047 | MS.gene66884:intron | 35.0% | |
TAGAGAAGGAAATGAATGTG+TGG | - | chr2.3:38033273-38033292 | None:intergenic | 35.0% | |
TATGTGTATTTCACAGCTTC+TGG | + | chr2.3:38036220-38036239 | MS.gene66884:intron | 35.0% | |
TCGTAGTTAATTGTGATACG+TGG | + | chr2.3:38035739-38035758 | MS.gene66884:intron | 35.0% | |
TGAGATTCAAGCAAGTGTTT+GGG | + | chr2.3:38034555-38034574 | MS.gene66884:intron | 35.0% | |
TGCAACTAATCAGGTGATTA+TGG | + | chr2.3:38034087-38034106 | MS.gene66884:intron | 35.0% | |
TGGGAATTGTAGAAGCTTAT+TGG | + | chr2.3:38034448-38034467 | MS.gene66884:CDS | 35.0% | |
TGTTGTTAAGAATGCACTTG+AGG | - | chr2.3:38033574-38033593 | None:intergenic | 35.0% | |
TTAAGCATACAACTAGATGC+TGG | + | chr2.3:38031851-38031870 | MS.gene66884:intron | 35.0% | |
TTCATTATGGTACAAACCTG+AGG | + | chr2.3:38036292-38036311 | MS.gene66884:CDS | 35.0% | |
TTGAATGTAACCACATGTGT+CGG | + | chr2.3:38032059-38032078 | MS.gene66884:intron | 35.0% | |
TTGAGATTCAAGCAAGTGTT+TGG | + | chr2.3:38034554-38034573 | MS.gene66884:intron | 35.0% | |
! | ACTCGCTAATTTTCCATTTG+GGG | + | chr2.3:38035897-38035916 | MS.gene66884:intron | 35.0% |
! | CGATGAGATATCCTCTAAAA+AGG | + | chr2.3:38032551-38032570 | MS.gene66884:intron | 35.0% |
! | CTGCTTATATACAGCCTTTT+GGG | + | chr2.3:38035556-38035575 | MS.gene66884:intron | 35.0% |
! | GTACTCGCTAATTTTCCATT+TGG | + | chr2.3:38035895-38035914 | MS.gene66884:intron | 35.0% |
! | GTTTATGGTACCCTTTTTAG+AGG | - | chr2.3:38032565-38032584 | None:intergenic | 35.0% |
! | TGCTTATATACAGCCTTTTG+GGG | + | chr2.3:38035557-38035576 | MS.gene66884:intron | 35.0% |
! | TTTTCTGATGTGTGTGTATG+GGG | + | chr2.3:38032906-38032925 | MS.gene66884:intron | 35.0% |
!! | CTTTATCCTTGTTTCAGGTT+CGG | - | chr2.3:38032980-38032999 | None:intergenic | 35.0% |
!! | TTAGTCTCTGATTTTGCTGT+TGG | + | chr2.3:38035162-38035181 | MS.gene66884:intron | 35.0% |
!! | TTGTTGTTTCATGGATCACT+TGG | + | chr2.3:38032265-38032284 | MS.gene66884:intron | 35.0% |
!!! | ATATTTTGGTTCACCCCAAA+TGG | - | chr2.3:38035913-38035932 | None:intergenic | 35.0% |
!!! | TAGTCTCTGATTTTGCTGTT+GGG | + | chr2.3:38035163-38035182 | MS.gene66884:intron | 35.0% |
AACTGAGTCAAGATGGATAG+TGG | - | chr2.3:38032827-38032846 | None:intergenic | 40.0% | |
AAGAATTTACGGATGTCAGC+AGG | + | chr2.3:38034298-38034317 | MS.gene66884:CDS | 40.0% | |
AATGATAGTTGGGGCAAAAC+AGG | + | chr2.3:38033794-38033813 | MS.gene66884:intron | 40.0% | |
AATGTGTGGATCAGCATAGT+TGG | - | chr2.3:38033259-38033278 | None:intergenic | 40.0% | |
ACTTCACAACTGAGTCAAGA+TGG | - | chr2.3:38032834-38032853 | None:intergenic | 40.0% | |
AGAATTTACGGATGTCAGCA+GGG | + | chr2.3:38034299-38034318 | MS.gene66884:CDS | 40.0% | |
ATCAGAGACTAACCTTAGCA+TGG | - | chr2.3:38035154-38035173 | None:intergenic | 40.0% | |
ATGCCTCATCTCTTCCATTT+AGG | + | chr2.3:38032637-38032656 | MS.gene66884:intron | 40.0% | |
ATGCGAGTATTCCAACACAT+AGG | - | chr2.3:38033868-38033887 | None:intergenic | 40.0% | |
ATGGAGATTCTACTGGGATA+TGG | - | chr2.3:38032664-38032683 | None:intergenic | 40.0% | |
ATGTAGCTTCCGATTATCTC+TGG | + | chr2.3:38031753-38031772 | MS.gene66884:CDS | 40.0% | |
CATCTTATTCTTGGGGAAGA+AGG | + | chr2.3:38031716-38031735 | MS.gene66884:CDS | 40.0% | |
CATGAAACAACAAATGCACG+AGG | - | chr2.3:38032258-38032277 | None:intergenic | 40.0% | |
CCAAAAGGCTGTATATAAGC+AGG | - | chr2.3:38035558-38035577 | None:intergenic | 40.0% | |
CCAAATTCAAACAGGGCAAA+AGG | - | chr2.3:38031899-38031918 | None:intergenic | 40.0% | |
CGAACCTGAAACAAGGATAA+AGG | + | chr2.3:38032978-38032997 | MS.gene66884:intron | 40.0% | |
CGAAGCTGCAATATTAGAAG+TGG | + | chr2.3:38031673-38031692 | MS.gene66884:CDS | 40.0% | |
CTATTGGAGTTGTATGAGGA+AGG | + | chr2.3:38032722-38032741 | MS.gene66884:intron | 40.0% | |
GCCCTACAGGATAAAGATTA+AGG | - | chr2.3:38032796-38032815 | None:intergenic | 40.0% | |
GCTTGTGTTCTTTGTATGTG+AGG | + | chr2.3:38032136-38032155 | MS.gene66884:intron | 40.0% | |
GGACACATACTACGAATGAA+AGG | - | chr2.3:38031971-38031990 | None:intergenic | 40.0% | |
GGATGCTGTTAATAAGCCAA+GGG | + | chr2.3:38031479-38031498 | MS.gene66884:CDS | 40.0% | |
GGTGTTTATGGAGATTCTAC+TGG | - | chr2.3:38032671-38032690 | None:intergenic | 40.0% | |
GTCACTTAATTGACTAGGAG+TGG | + | chr2.3:38036140-38036159 | MS.gene66884:intron | 40.0% | |
GTTCCACCTGAAAGAAATGA+AGG | - | chr2.3:38034209-38034228 | None:intergenic | 40.0% | |
TAATTGTGATACGTGGAACG+TGG | + | chr2.3:38035746-38035765 | MS.gene66884:intron | 40.0% | |
TCTGTTGGAGTTCTATATCG+AGG | + | chr2.3:38032366-38032385 | MS.gene66884:CDS | 40.0% | |
TGCCTCATCTCTTCCATTTA+GGG | + | chr2.3:38032638-38032657 | MS.gene66884:intron | 40.0% | |
TGGATAAGTAATGCACGGAT+AGG | + | chr2.3:38035681-38035700 | MS.gene66884:intron | 40.0% | |
TGGATGCTGTTAATAAGCCA+AGG | + | chr2.3:38031478-38031497 | MS.gene66884:CDS | 40.0% | |
TGGTAACTAAGAATGATCGC+AGG | + | chr2.3:38034748-38034767 | MS.gene66884:intron | 40.0% | |
TTATAGATGGTAGAGGAAGC+TGG | + | chr2.3:38035053-38035072 | MS.gene66884:intron | 40.0% | |
TTGATGCTTAGGGTGTAAGA+CGG | + | chr2.3:38034388-38034407 | MS.gene66884:intron | 40.0% | |
! | AAAACACTTTAGGGGTTCCA+TGG | - | chr2.3:38033366-38033385 | None:intergenic | 40.0% |
! | AGAGTCATATGTTGGCTAAG+CGG | + | chr2.3:38035367-38035386 | MS.gene66884:intron | 40.0% |
! | CCTGCTTATATACAGCCTTT+TGG | + | chr2.3:38035555-38035574 | MS.gene66884:intron | 40.0% |
! | CCTTTTGCCCTGTTTGAATT+TGG | + | chr2.3:38031896-38031915 | MS.gene66884:intron | 40.0% |
! | CTCTTCTAGTGACAGGTTTT+GGG | + | chr2.3:38034232-38034251 | MS.gene66884:CDS | 40.0% |
! | CTTATATACAGCCTTTTGGG+GGG | + | chr2.3:38035559-38035578 | MS.gene66884:intron | 40.0% |
! | GCTTATATACAGCCTTTTGG+GGG | + | chr2.3:38035558-38035577 | MS.gene66884:intron | 40.0% |
! | GGAATATCGTCTAAAGCCAT+GGG | + | chr2.3:38034470-38034489 | MS.gene66884:CDS | 40.0% |
! | TCTCTTCTAGTGACAGGTTT+TGG | + | chr2.3:38034231-38034250 | MS.gene66884:CDS | 40.0% |
! | TGTCCCTTTATCCTTGTTTC+AGG | - | chr2.3:38032985-38033004 | None:intergenic | 40.0% |
! | TTGGGCTGAATTGACTTATG+AGG | - | chr2.3:38035419-38035438 | None:intergenic | 40.0% |
!! | ATTAATTTGCACCCCCCAAA+AGG | - | chr2.3:38035573-38035592 | None:intergenic | 40.0% |
!! | CTCGTGCATTTGTTGTTTCA+TGG | + | chr2.3:38032256-38032275 | MS.gene66884:intron | 40.0% |
!! | GGCTTTAGGTTAACAACAAG+AGG | + | chr2.3:38034681-38034700 | MS.gene66884:intron | 40.0% |
!! | TCTAAGGGGTTGATAGAAGT+TGG | - | chr2.3:38033926-38033945 | None:intergenic | 40.0% |
!! | TTTCAGGTTGAGTTTGTTGG+TGG | + | chr2.3:38033841-38033860 | MS.gene66884:intron | 40.0% |
AAATCCTACTGCTGCTACAG+TGG | + | chr2.3:38032389-38032408 | MS.gene66884:CDS | 45.0% | |
AGAATTGGACCTGCAACAGA+GGG | + | chr2.3:38036245-38036264 | MS.gene66884:CDS | 45.0% | |
ATAGCCCTGGTATGAACAAG+GGG | - | chr2.3:38033430-38033449 | None:intergenic | 45.0% | |
CATACCCCTTGTTCATACCA+GGG | + | chr2.3:38033423-38033442 | MS.gene66884:intron | 45.0% | |
CCAACAGAAACAGCAAAGCT+GGG | - | chr2.3:38032354-38032373 | None:intergenic | 45.0% | |
CGAAGTGAGTGCAACTAATC+AGG | + | chr2.3:38034078-38034097 | MS.gene66884:CDS | 45.0% | |
CTATGTTCTTACGGGTTCCT+AGG | - | chr2.3:38034920-38034939 | None:intergenic | 45.0% | |
CTTATTCTTGGGGAAGAAGG+AGG | + | chr2.3:38031719-38031738 | MS.gene66884:CDS | 45.0% | |
GAACGATCTCTTCTAGTGAC+AGG | + | chr2.3:38034225-38034244 | MS.gene66884:CDS | 45.0% | |
GACATGTGTCATGTGGCTTT+GGG | + | chr2.3:38034429-38034448 | MS.gene66884:CDS | 45.0% | |
GATAGCCCTGGTATGAACAA+GGG | - | chr2.3:38033431-38033450 | None:intergenic | 45.0% | |
GGGACAACAAACTTTGCACA+TGG | + | chr2.3:38032324-38032343 | MS.gene66884:CDS | 45.0% | |
GTATGAACACGATGAAGCCT+GGG | + | chr2.3:38034254-38034273 | MS.gene66884:CDS | 45.0% | |
TACTGGGATATGGCCCTAAA+TGG | - | chr2.3:38032654-38032673 | None:intergenic | 45.0% | |
TCAGCACTGCTATGCTATCT+GGG | - | chr2.3:38032953-38032972 | None:intergenic | 45.0% | |
TCAGTTGTGAAGTGACGTCT+CGG | + | chr2.3:38032841-38032860 | MS.gene66884:intron | 45.0% | |
TCATACCCCTTGTTCATACC+AGG | + | chr2.3:38033422-38033441 | MS.gene66884:intron | 45.0% | |
TCCAACAGAAACAGCAAAGC+TGG | - | chr2.3:38032355-38032374 | None:intergenic | 45.0% | |
TGATAGCCCTGGTATGAACA+AGG | - | chr2.3:38033432-38033451 | None:intergenic | 45.0% | |
TGGTGAAAGGCAGAGAAATG+AGG | - | chr2.3:38034353-38034372 | None:intergenic | 45.0% | |
TTCTCATACCTTGTAGGTGG+TGG | + | chr2.3:38034031-38034050 | MS.gene66884:intron | 45.0% | |
TTGCACTCACTTCGATCCTT+TGG | - | chr2.3:38034072-38034091 | None:intergenic | 45.0% | |
! | ACTTGTTAGAGCAGGTGAAG+TGG | - | chr2.3:38035232-38035251 | None:intergenic | 45.0% |
! | ATTCCTTCTCCGTTTTCCGT+TGG | - | chr2.3:38032887-38032906 | None:intergenic | 45.0% |
! | GGGAATATCGTCTAAAGCCA+TGG | + | chr2.3:38034469-38034488 | MS.gene66884:CDS | 45.0% |
! | TCACAGCTTCTGGAGAGAAT+TGG | + | chr2.3:38036230-38036249 | MS.gene66884:intron | 45.0% |
! | TCGTCTAAAGCCATGGGATA+TGG | + | chr2.3:38034476-38034495 | MS.gene66884:CDS | 45.0% |
!! | ACTGACTTGGTGACTGAGTA+AGG | + | chr2.3:38031522-38031541 | MS.gene66884:intron | 45.0% |
!! | CTTGATTTCTGGCCTACCAA+CGG | + | chr2.3:38032868-38032887 | MS.gene66884:intron | 45.0% |
!! | CTTTTTAAGCCCTCTGTTGC+AGG | - | chr2.3:38036257-38036276 | None:intergenic | 45.0% |
!! | GCAAGTGTTTGGGTTTTGTG+TGG | + | chr2.3:38034565-38034584 | MS.gene66884:intron | 45.0% |
!! | TTGTTGGTGGTCCTATGTGT+TGG | + | chr2.3:38033854-38033873 | MS.gene66884:CDS | 45.0% |
AAACGGCGTGATCCATGCTA+AGG | + | chr2.3:38035139-38035158 | MS.gene66884:CDS | 50.0% | |
AAGCGGTACAATGCCTCATG+CGG | + | chr2.3:38035384-38035403 | MS.gene66884:intron | 50.0% | |
AGAATGCTCCACCACCTACA+AGG | - | chr2.3:38034042-38034061 | None:intergenic | 50.0% | |
ATCACCACTGTAGCAGCAGT+AGG | - | chr2.3:38032396-38032415 | None:intergenic | 50.0% | |
CTACCAACGGAAAACGGAGA+AGG | + | chr2.3:38032881-38032900 | MS.gene66884:intron | 50.0% | |
CTCAGCACTGCTATGCTATC+TGG | - | chr2.3:38032954-38032973 | None:intergenic | 50.0% | |
GAATGATCGCAGGCTATCTG+TGG | + | chr2.3:38034758-38034777 | MS.gene66884:intron | 50.0% | |
GACTGCAGTGCTGTGACATA+TGG | - | chr2.3:38033404-38033423 | None:intergenic | 50.0% | |
GAGAATTGGACCTGCAACAG+AGG | + | chr2.3:38036244-38036263 | MS.gene66884:CDS | 50.0% | |
GAGTAGCCGAACCTGAAACA+AGG | + | chr2.3:38032971-38032990 | MS.gene66884:intron | 50.0% | |
GGACATGTGTCATGTGGCTT+TGG | + | chr2.3:38034428-38034447 | MS.gene66884:CDS | 50.0% | |
GGCCCTAAATGGAAGAGATG+AGG | - | chr2.3:38032643-38032662 | None:intergenic | 50.0% | |
GGTATGAACACGATGAAGCC+TGG | + | chr2.3:38034253-38034272 | MS.gene66884:CDS | 50.0% | |
TAGATGGTAGAGGAAGCTGG+TGG | + | chr2.3:38035056-38035075 | MS.gene66884:intron | 50.0% | |
TCTGGCCTACCAACGGAAAA+CGG | + | chr2.3:38032875-38032894 | MS.gene66884:intron | 50.0% | |
TGCTGTGGACATGTGTCATG+TGG | + | chr2.3:38034422-38034441 | MS.gene66884:CDS | 50.0% | |
! | CGCATTTTCACTGCAACTGC+TGG | + | chr2.3:38033883-38033902 | MS.gene66884:CDS | 50.0% |
! | CTCTGGTGCATTGATCCCTT+AGG | + | chr2.3:38031770-38031789 | MS.gene66884:CDS | 50.0% |
! | CTTCTCCGTTTTCCGTTGGT+AGG | - | chr2.3:38032883-38032902 | None:intergenic | 50.0% |
! | GAGGAAGCTTTATCCGCATG+AGG | - | chr2.3:38035400-38035419 | None:intergenic | 50.0% |
! | GGATATGGCTGCTGGTGTTT+TGG | + | chr2.3:38034491-38034510 | MS.gene66884:CDS | 50.0% |
! | GTCTCGGTGGACTTGATTTC+TGG | + | chr2.3:38032857-38032876 | MS.gene66884:intron | 50.0% |
!! | CCCAGCTTTGCTGTTTCTGT+TGG | + | chr2.3:38032351-38032370 | MS.gene66884:CDS | 50.0% |
!! | GGGGAAGAAGGAGGCATTAT+AGG | + | chr2.3:38031728-38031747 | MS.gene66884:CDS | 50.0% |
AAGCCATGGGATATGGCTGC+TGG | + | chr2.3:38034483-38034502 | MS.gene66884:CDS | 55.0% | |
AAGCTGGTGGCACAGTCTCT+CGG | + | chr2.3:38035069-38035088 | MS.gene66884:CDS | 55.0% | |
ACACCAGCAGCCATATCCCA+TGG | - | chr2.3:38034489-38034508 | None:intergenic | 55.0% | |
ACAGTCTCTCGGATGGATGG+CGG | + | chr2.3:38035080-38035099 | MS.gene66884:CDS | 55.0% | |
ACGTCAGCTCTGTAGTCCTC+AGG | - | chr2.3:38036311-38036330 | None:intergenic | 55.0% | |
AGTGGCTATCAGAGCCCTAC+AGG | - | chr2.3:38032809-38032828 | None:intergenic | 55.0% | |
CGACACTTACACGTCGACAC+TGG | + | chr2.3:38032020-38032039 | MS.gene66884:intron | 55.0% | |
GAGCATTCTGCAACGGCCAA+AGG | + | chr2.3:38034053-38034072 | MS.gene66884:CDS | 55.0% | |
GCTTAGGGTGTAAGACGGCT+TGG | + | chr2.3:38034393-38034412 | MS.gene66884:intron | 55.0% | |
GGATAAAGGGACAGCGTGTG+TGG | + | chr2.3:38032992-38033011 | MS.gene66884:intron | 55.0% | |
GTTGTGAAGTGACGTCTCGG+TGG | + | chr2.3:38032844-38032863 | MS.gene66884:intron | 55.0% | |
TAAAGGGACAGCGTGTGTGG+CGG | + | chr2.3:38032995-38033014 | MS.gene66884:intron | 55.0% | |
!! | GGTGGTGGAGCATTCTGCAA+CGG | + | chr2.3:38034046-38034065 | MS.gene66884:intron | 55.0% |
AAAGGGACAGCGTGTGTGGC+GGG | + | chr2.3:38032996-38033015 | MS.gene66884:intron | 60.0% | |
GGCACAGTCTCTCGGATGGA+TGG | + | chr2.3:38035077-38035096 | MS.gene66884:CDS | 60.0% | |
GGGTATGACTGCAGTGCTCG+AGG | - | chr2.3:38033497-38033516 | None:intergenic | 60.0% | |
TGGTGGCACAGTCTCTCGGA+TGG | + | chr2.3:38035073-38035092 | MS.gene66884:CDS | 60.0% | |
!! | ACGGCTTGGTGCAGCTGCTG+TGG | + | chr2.3:38034407-38034426 | MS.gene66884:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 38031471 | 38036334 | 38031471 | ID=MS.gene66884 |
chr2.3 | mRNA | 38031471 | 38036334 | 38031471 | ID=MS.gene66884.t1;Parent=MS.gene66884 |
chr2.3 | exon | 38031471 | 38031538 | 38031471 | ID=MS.gene66884.t1.exon1;Parent=MS.gene66884.t1 |
chr2.3 | CDS | 38031471 | 38031538 | 38031471 | ID=cds.MS.gene66884.t1;Parent=MS.gene66884.t1 |
chr2.3 | exon | 38031658 | 38031791 | 38031658 | ID=MS.gene66884.t1.exon2;Parent=MS.gene66884.t1 |
chr2.3 | CDS | 38031658 | 38031791 | 38031658 | ID=cds.MS.gene66884.t1;Parent=MS.gene66884.t1 |
chr2.3 | exon | 38032322 | 38032410 | 38032322 | ID=MS.gene66884.t1.exon3;Parent=MS.gene66884.t1 |
chr2.3 | CDS | 38032322 | 38032410 | 38032322 | ID=cds.MS.gene66884.t1;Parent=MS.gene66884.t1 |
chr2.3 | exon | 38033847 | 38033904 | 38033847 | ID=MS.gene66884.t1.exon4;Parent=MS.gene66884.t1 |
chr2.3 | CDS | 38033847 | 38033904 | 38033847 | ID=cds.MS.gene66884.t1;Parent=MS.gene66884.t1 |
chr2.3 | exon | 38034047 | 38034099 | 38034047 | ID=MS.gene66884.t1.exon5;Parent=MS.gene66884.t1 |
chr2.3 | CDS | 38034047 | 38034099 | 38034047 | ID=cds.MS.gene66884.t1;Parent=MS.gene66884.t1 |
chr2.3 | exon | 38034222 | 38034320 | 38034222 | ID=MS.gene66884.t1.exon6;Parent=MS.gene66884.t1 |
chr2.3 | CDS | 38034222 | 38034320 | 38034222 | ID=cds.MS.gene66884.t1;Parent=MS.gene66884.t1 |
chr2.3 | exon | 38034399 | 38034512 | 38034399 | ID=MS.gene66884.t1.exon7;Parent=MS.gene66884.t1 |
chr2.3 | CDS | 38034399 | 38034512 | 38034399 | ID=cds.MS.gene66884.t1;Parent=MS.gene66884.t1 |
chr2.3 | exon | 38035059 | 38035160 | 38035059 | ID=MS.gene66884.t1.exon8;Parent=MS.gene66884.t1 |
chr2.3 | CDS | 38035059 | 38035160 | 38035059 | ID=cds.MS.gene66884.t1;Parent=MS.gene66884.t1 |
chr2.3 | exon | 38036236 | 38036334 | 38036236 | ID=MS.gene66884.t1.exon9;Parent=MS.gene66884.t1 |
chr2.3 | CDS | 38036236 | 38036334 | 38036236 | ID=cds.MS.gene66884.t1;Parent=MS.gene66884.t1 |
Gene Sequence |
Protein sequence |