Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68121.t1 | AAB41324.1 | 99.7 | 325 | 1 | 0 | 1 | 325 | 3 | 327 | 1.40E-193 | 685.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68121.t1 | P21226 | 86.6 | 320 | 42 | 1 | 4 | 323 | 3 | 321 | 7.9e-169 | 594.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68121.t1 | P94084 | 99.7 | 325 | 1 | 0 | 1 | 325 | 3 | 327 | 1.0e-193 | 685.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene68121 | -0.846577 | 1.99E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene68121 | -0.818969 | 1.48E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene68121 | -0.804072 | 2.58E-49 | -1.69E-46 |
| MS.gene049396 | MS.gene68121 | -0.815333 | 9.76E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene68121 | -0.803643 | 3.16E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene68121 | -0.800367 | 1.49E-48 | -1.69E-46 |
| MS.gene050380 | MS.gene68121 | 0.899024 | 2.98E-77 | -1.69E-46 |
| MS.gene050381 | MS.gene68121 | 0.855615 | 5.60E-62 | -1.69E-46 |
| MS.gene050538 | MS.gene68121 | -0.810759 | 9.82E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene68121 | -0.801982 | 6.96E-49 | -1.69E-46 |
| MS.gene050800 | MS.gene68121 | 0.800778 | 1.23E-48 | -1.69E-46 |
| MS.gene050809 | MS.gene68121 | 0.826342 | 2.86E-54 | -1.69E-46 |
| MS.gene05080 | MS.gene68121 | -0.826235 | 3.03E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene68121 | -0.82434 | 8.51E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene68121 | -0.829104 | 6.20E-55 | -1.69E-46 |
| MS.gene051113 | MS.gene68121 | 0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene051167 | MS.gene68121 | 0.813367 | 2.65E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene68121 | -0.80356 | 3.29E-49 | -1.69E-46 |
| MS.gene05141 | MS.gene68121 | 0.813298 | 2.75E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene68121 | -0.804171 | 2.46E-49 | -1.69E-46 |
| MS.gene051734 | MS.gene68121 | -0.808448 | 3.08E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene68121 | -0.81293 | 3.31E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene68121 | -0.824588 | 7.44E-54 | -1.69E-46 |
| MS.gene051874 | MS.gene68121 | -0.816864 | 4.44E-52 | -1.69E-46 |
| MS.gene051946 | MS.gene68121 | 0.801683 | 8.02E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene68121 | -0.818948 | 1.50E-52 | -1.69E-46 |
| MS.gene05234 | MS.gene68121 | 0.822506 | 2.28E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene68121 | -0.822942 | 1.81E-53 | -1.69E-46 |
| MS.gene053018 | MS.gene68121 | -0.802882 | 4.54E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene68121 | 0.838318 | 3.09E-57 | -1.69E-46 |
| MS.gene053421 | MS.gene68121 | 0.81742 | 3.33E-52 | -1.69E-46 |
| MS.gene053562 | MS.gene68121 | 0.829932 | 3.90E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene68121 | -0.820157 | 7.96E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene68121 | -0.830839 | 2.34E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene68121 | -0.821331 | 4.27E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene68121 | -0.810806 | 9.60E-51 | -1.69E-46 |
| MS.gene054003 | MS.gene68121 | -0.857921 | 1.17E-62 | -1.69E-46 |
| MS.gene054290 | MS.gene68121 | 0.823511 | 1.33E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene68121 | -0.833839 | 4.24E-56 | -1.69E-46 |
| MS.gene054706 | MS.gene68121 | 0.83158 | 1.54E-55 | -1.69E-46 |
| MS.gene054927 | MS.gene68121 | -0.807329 | 5.33E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene68121 | -0.806766 | 7.01E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene68121 | -0.810511 | 1.11E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene68121 | 0.80695 | 6.41E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene68121 | 0.80877 | 2.63E-50 | -1.69E-46 |
| MS.gene055202 | MS.gene68121 | 0.817768 | 2.78E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene68121 | -0.809638 | 1.71E-50 | -1.69E-46 |
| MS.gene055486 | MS.gene68121 | -0.820575 | 6.38E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene68121 | -0.823562 | 1.30E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene68121 | -0.831994 | 1.22E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene68121 | -0.836996 | 6.74E-57 | -1.69E-46 |
| MS.gene056166 | MS.gene68121 | -0.827569 | 1.46E-54 | -1.69E-46 |
| MS.gene056313 | MS.gene68121 | 0.812321 | 4.50E-51 | -1.69E-46 |
| MS.gene056330 | MS.gene68121 | 0.807594 | 4.68E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene68121 | -0.821476 | 3.96E-53 | -1.69E-46 |
| MS.gene056448 | MS.gene68121 | -0.825139 | 5.52E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene68121 | -0.817914 | 2.58E-52 | -1.69E-46 |
| MS.gene056942 | MS.gene68121 | -0.805505 | 1.29E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene68121 | -0.823948 | 1.05E-53 | -1.69E-46 |
| MS.gene057086 | MS.gene68121 | -0.812085 | 5.06E-51 | -1.69E-46 |
| MS.gene057146 | MS.gene68121 | -0.811014 | 8.65E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene68121 | 0.83655 | 8.76E-57 | -1.69E-46 |
| MS.gene057289 | MS.gene68121 | -0.819093 | 1.39E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene68121 | -0.802661 | 5.05E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene68121 | -0.808977 | 2.38E-50 | -1.69E-46 |
| MS.gene058067 | MS.gene68121 | 0.805391 | 1.37E-49 | -1.69E-46 |
| MS.gene058068 | MS.gene68121 | 0.808931 | 2.43E-50 | -1.69E-46 |
| MS.gene058093 | MS.gene68121 | 0.822475 | 2.32E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene68121 | -0.825667 | 4.14E-54 | -1.69E-46 |
| MS.gene058157 | MS.gene68121 | -0.842156 | 3.07E-58 | -1.69E-46 |
| MS.gene058170 | MS.gene68121 | 0.808206 | 3.47E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene68121 | 0.817268 | 3.60E-52 | -1.69E-46 |
| MS.gene058173 | MS.gene68121 | 0.808365 | 3.21E-50 | -1.69E-46 |
| MS.gene058174 | MS.gene68121 | 0.805749 | 1.15E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene68121 | 0.81215 | 4.90E-51 | -1.69E-46 |
| MS.gene058179 | MS.gene68121 | 0.819473 | 1.14E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene68121 | -0.817493 | 3.21E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene68121 | -0.83888 | 2.21E-57 | -1.69E-46 |
| MS.gene058840 | MS.gene68121 | 0.845093 | 5.03E-59 | -1.69E-46 |
| MS.gene059023 | MS.gene68121 | -0.806549 | 7.79E-50 | -1.69E-46 |
| MS.gene059037 | MS.gene68121 | 0.827884 | 1.22E-54 | -1.69E-46 |
| MS.gene059038 | MS.gene68121 | 0.80384 | 2.88E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene68121 | -0.802823 | 4.67E-49 | -1.69E-46 |
| MS.gene059223 | MS.gene68121 | 0.816661 | 4.93E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene68121 | -0.810831 | 9.48E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene68121 | -0.843335 | 1.49E-58 | -1.69E-46 |
| MS.gene059368 | MS.gene68121 | -0.841877 | 3.64E-58 | -1.69E-46 |
| MS.gene059711 | MS.gene68121 | -0.805262 | 1.45E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene68121 | -0.818688 | 1.72E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene68121 | -0.819704 | 1.01E-52 | -1.69E-46 |
| MS.gene060205 | MS.gene68121 | 0.812994 | 3.20E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene68121 | -0.824289 | 8.75E-54 | -1.69E-46 |
| MS.gene060578 | MS.gene68121 | 0.805688 | 1.18E-49 | -1.69E-46 |
| MS.gene06074 | MS.gene68121 | 0.827172 | 1.81E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene68121 | -0.816651 | 4.96E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene68121 | -0.80028 | 1.55E-48 | -1.69E-46 |
| MS.gene060835 | MS.gene68121 | -0.815259 | 1.01E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene68121 | -0.827388 | 1.61E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene68121 | -0.804462 | 2.14E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68121.t1 | MTR_3g118390 | 95.427 | 328 | 9 | 3 | 1 | 325 | 58 | 382 | 0.0 | 607 |
| MS.gene68121.t1 | MTR_8g074330 | 66.221 | 299 | 90 | 3 | 21 | 309 | 22 | 319 | 1.26e-146 | 416 |
| MS.gene68121.t1 | MTR_8g074350 | 62.857 | 315 | 107 | 3 | 4 | 309 | 6 | 319 | 6.02e-146 | 414 |
| MS.gene68121.t1 | MTR_8g074335 | 62.914 | 302 | 88 | 2 | 19 | 309 | 20 | 308 | 8.78e-135 | 385 |
| MS.gene68121.t1 | MTR_7g110780 | 55.785 | 242 | 105 | 2 | 70 | 309 | 36 | 277 | 1.63e-98 | 292 |
| MS.gene68121.t1 | MTR_2g099470 | 36.893 | 309 | 143 | 10 | 5 | 303 | 16 | 282 | 7.29e-57 | 186 |
| MS.gene68121.t1 | MTR_1g105535 | 38.800 | 250 | 142 | 5 | 79 | 317 | 72 | 321 | 3.78e-55 | 182 |
| MS.gene68121.t1 | MTR_7g021640 | 37.600 | 250 | 145 | 5 | 79 | 317 | 69 | 318 | 3.86e-55 | 182 |
| MS.gene68121.t1 | MTR_2g034680 | 34.441 | 331 | 183 | 12 | 2 | 317 | 4 | 315 | 9.68e-53 | 176 |
| MS.gene68121.t1 | MTR_2g099465 | 35.714 | 238 | 116 | 6 | 69 | 303 | 51 | 254 | 2.24e-45 | 155 |
| MS.gene68121.t1 | MTR_7g115220 | 53.704 | 54 | 25 | 0 | 7 | 60 | 4 | 57 | 4.18e-14 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68121.t1 | AT3G12500 | 69.967 | 303 | 86 | 3 | 21 | 318 | 33 | 335 | 5.29e-158 | 445 |
| MS.gene68121.t1 | AT4G01700 | 59.504 | 242 | 96 | 2 | 70 | 309 | 38 | 279 | 8.85e-108 | 316 |
| MS.gene68121.t1 | AT1G02360 | 57.613 | 243 | 101 | 2 | 70 | 310 | 30 | 272 | 2.49e-104 | 306 |
| MS.gene68121.t1 | AT1G02360 | 57.613 | 243 | 101 | 2 | 70 | 310 | 82 | 324 | 4.30e-104 | 308 |
| MS.gene68121.t1 | AT1G02360 | 57.613 | 243 | 101 | 2 | 70 | 310 | 76 | 318 | 5.46e-104 | 307 |
| MS.gene68121.t1 | AT2G43590 | 41.522 | 289 | 122 | 10 | 20 | 303 | 18 | 264 | 3.45e-65 | 206 |
| MS.gene68121.t1 | AT2G43610 | 37.421 | 318 | 140 | 8 | 1 | 303 | 8 | 281 | 3.26e-61 | 197 |
| MS.gene68121.t1 | AT2G43620 | 36.250 | 320 | 143 | 9 | 1 | 303 | 8 | 283 | 2.86e-58 | 189 |
| MS.gene68121.t1 | AT2G43580 | 37.545 | 277 | 127 | 8 | 33 | 303 | 29 | 265 | 4.05e-58 | 188 |
| MS.gene68121.t1 | AT3G54420 | 36.877 | 301 | 148 | 8 | 8 | 303 | 10 | 273 | 9.46e-58 | 187 |
| MS.gene68121.t1 | AT2G43570 | 38.387 | 310 | 139 | 10 | 4 | 303 | 10 | 277 | 1.86e-57 | 187 |
| MS.gene68121.t1 | AT1G05850 | 36.327 | 245 | 145 | 6 | 79 | 312 | 69 | 313 | 3.63e-52 | 175 |
| MS.gene68121.t1 | AT1G05850 | 36.327 | 245 | 145 | 6 | 79 | 312 | 69 | 313 | 3.63e-52 | 175 |
| MS.gene68121.t1 | AT3G16920 | 33.677 | 291 | 166 | 10 | 32 | 309 | 67 | 343 | 6.73e-50 | 170 |
| MS.gene68121.t1 | AT3G16920 | 36.214 | 243 | 143 | 6 | 79 | 309 | 77 | 319 | 7.19e-50 | 169 |
| MS.gene68121.t1 | AT1G56680 | 37.193 | 285 | 125 | 12 | 33 | 303 | 36 | 280 | 1.06e-43 | 151 |
| MS.gene68121.t1 | AT1G56680 | 37.193 | 285 | 125 | 12 | 33 | 303 | 59 | 303 | 1.14e-43 | 152 |
| MS.gene68121.t1 | AT2G43600 | 31.761 | 318 | 157 | 14 | 1 | 303 | 1 | 273 | 6.60e-41 | 144 |
| MS.gene68121.t1 | AT2G43600 | 31.761 | 318 | 157 | 13 | 1 | 303 | 22 | 294 | 1.35e-40 | 144 |
| MS.gene68121.t1 | AT3G47540 | 29.555 | 247 | 117 | 9 | 61 | 303 | 21 | 214 | 1.60e-26 | 104 |
| MS.gene68121.t1 | AT3G47540 | 29.289 | 239 | 112 | 10 | 61 | 295 | 21 | 206 | 3.79e-23 | 97.4 |
Find 122 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAATTCCCATGTGCTTC+TGG | 0.217154 | 3.4:+100246883 | MS.gene68121:CDS |
| TCAAGACCGCTCTATGGTTT+TGG | 0.239800 | 3.4:+100247034 | MS.gene68121:CDS |
| AAGAGAGATTGCTGCTTTCT+TGG | 0.252696 | 3.4:+100246747 | MS.gene68121:CDS |
| ACAGTTGTACTTCTAATTAT+AGG | 0.265089 | 3.4:+100246409 | MS.gene68121:CDS |
| AGTGGCAGTATCTCCGTTAT+TGG | 0.267179 | 3.4:-100246719 | None:intergenic |
| GGATTATGTTGCAGCAAGTT+TGG | 0.342049 | 3.4:+100246487 | MS.gene68121:CDS |
| ACCTGATGGCCCATATGCTT+GGG | 0.345696 | 3.4:+100246810 | MS.gene68121:CDS |
| GGCAAGATGGCTTAGGTGAC+TGG | 0.367579 | 3.4:-100247065 | None:intergenic |
| GCGGTCTTGAAGGATATAAC+AGG | 0.369314 | 3.4:-100247021 | None:intergenic |
| CCGCGACGACAGTGGGTGTC+AGG | 0.374984 | 3.4:+100246636 | MS.gene68121:CDS |
| ATCTCTTGGAATTACAACTA+TGG | 0.379651 | 3.4:+100246937 | MS.gene68121:CDS |
| TCTCCGTTATTGGCAAAGTT+GGG | 0.384499 | 3.4:-100246709 | None:intergenic |
| ATCTCCGTTATTGGCAAAGT+TGG | 0.385181 | 3.4:-100246710 | None:intergenic |
| AAACAGTATCCCCAAGCATA+TGG | 0.388274 | 3.4:-100246820 | None:intergenic |
| AGAGAGATTGCTGCTTTCTT+GGG | 0.391578 | 3.4:+100246748 | MS.gene68121:CDS |
| GCCGCACGATCTGCACTTGA+AGG | 0.394855 | 3.4:-100247114 | None:intergenic |
| GGGTCGGTGGCTACGAGGTC+TGG | 0.395115 | 3.4:-100247000 | None:intergenic |
| ACGGTGACCAACATAATAAA+TGG | 0.408433 | 3.4:+100247159 | MS.gene68121:CDS |
| CACCTGATGGCCCATATGCT+TGG | 0.408615 | 3.4:+100246809 | MS.gene68121:CDS |
| ACCTTGGTAGCCTCATCTCC+AGG | 0.409232 | 3.4:+100246587 | MS.gene68121:CDS |
| TATCCTTCAAGACCGCTCTA+TGG | 0.417767 | 3.4:+100247028 | MS.gene68121:CDS |
| TTCCCCAACTTTGCCAATAA+CGG | 0.422589 | 3.4:+100246706 | MS.gene68121:CDS |
| TTTGGTTGGTGTGGATCAAC+CGG | 0.423582 | 3.4:+100246505 | MS.gene68121:CDS |
| GAGCAATGCGGTAAACAAGC+TGG | 0.425265 | 3.4:+100246445 | MS.gene68121:CDS |
| CTGAATTCCCATGTGCTTCT+GGG | 0.426573 | 3.4:+100246884 | MS.gene68121:CDS |
| GACAGTGGGTGTCAGGGAAA+AGG | 0.431710 | 3.4:+100246643 | MS.gene68121:CDS |
| TCAAGTGCAGATCGTGCGGC+AGG | 0.437021 | 3.4:+100247117 | MS.gene68121:CDS |
| CCCCAAGCATATGGGCCATC+AGG | 0.442945 | 3.4:-100246811 | None:intergenic |
| GGGGTCCCATCCAGATCTCT+TGG | 0.446620 | 3.4:+100246923 | MS.gene68121:CDS |
| GGAAGAGTGCAAGATCGAAT+TGG | 0.452651 | 3.4:+100247210 | MS.gene68121:CDS |
| CGTGCGGCAGGGAGGCTGTC+GGG | 0.453721 | 3.4:+100247129 | MS.gene68121:CDS |
| AAGAGATATTGTGACATACT+TGG | 0.456754 | 3.4:+100247240 | MS.gene68121:CDS |
| GCTTGGTTGGCAGTATGTGC+TGG | 0.457550 | 3.4:-100246860 | None:intergenic |
| AGTTGTAATTCCAAGAGATC+TGG | 0.459012 | 3.4:-100246933 | None:intergenic |
| TGTGGTGGAAGCAGCGGTGG+TGG | 0.464852 | 3.4:+100246559 | MS.gene68121:CDS |
| GCAGGGAGGCTGTCGGGATA+CGG | 0.465392 | 3.4:+100247135 | MS.gene68121:CDS |
| AAGCCCTCCATTTATTATGT+TGG | 0.467188 | 3.4:-100247166 | None:intergenic |
| GCTTGAATGCGGAAGAGGAC+AGG | 0.469162 | 3.4:+100247185 | MS.gene68121:CDS |
| CATATTGTTGAAGGTGTCCC+TGG | 0.472449 | 3.4:-100246605 | None:intergenic |
| AATTATAGGATGCTCCTTTG+CGG | 0.484301 | 3.4:+100246423 | MS.gene68121:CDS |
| ACGTCATGGCAAGATGGCTT+AGG | 0.486782 | 3.4:-100247072 | None:intergenic |
| TGCAGCAAGTTTGGTTGGTG+TGG | 0.495929 | 3.4:+100246496 | MS.gene68121:CDS |
| TGTCGATGGAGTTGAGGAAG+AGG | 0.496125 | 3.4:-100247332 | None:intergenic |
| TATTGTGACATACTTGGAGT+TGG | 0.497183 | 3.4:+100247246 | MS.gene68121:CDS |
| TATGTTGCAGCAAGTTTGGT+TGG | 0.497633 | 3.4:+100246491 | MS.gene68121:CDS |
| AGCAATGCGGTAAACAAGCT+GGG | 0.497747 | 3.4:+100246446 | MS.gene68121:CDS |
| CTCAAGCACCGCGACGACAG+TGG | 0.499489 | 3.4:+100246628 | MS.gene68121:CDS |
| AAACCATAGAGCGGTCTTGA+AGG | 0.501381 | 3.4:-100247031 | None:intergenic |
| GGAGGGCTTGAATGCGGAAG+AGG | 0.505113 | 3.4:+100247180 | MS.gene68121:CDS |
| GACATACTTGGAGTTGGATA+CGG | 0.506146 | 3.4:+100247252 | MS.gene68121:CDS |
| GGTGGAAGCAGCGGTGGTGG+TGG | 0.509175 | 3.4:+100246562 | MS.gene68121:CDS |
| GTCGATGGAGTTGAGGAAGA+GGG | 0.513369 | 3.4:-100247331 | None:intergenic |
| AACAGTATCCCCAAGCATAT+GGG | 0.514066 | 3.4:-100246819 | None:intergenic |
| AGCTGAGATGAAAGCATCAT+AGG | 0.514449 | 3.4:-100246674 | None:intergenic |
| GCAAGATGGCTTAGGTGACT+GGG | 0.515135 | 3.4:-100247064 | None:intergenic |
| CTGGGAAGCAATACTACGGT+AGG | 0.515707 | 3.4:+100246902 | MS.gene68121:CDS |
| GGCAAAGTTGGGGAACGCCT+TGG | 0.517997 | 3.4:-100246698 | None:intergenic |
| CACACGAAACCACAGGTGGA+TGG | 0.523011 | 3.4:+100246779 | MS.gene68121:CDS |
| ACAGTGGGTGTCAGGGAAAA+GGG | 0.529441 | 3.4:+100246644 | MS.gene68121:CDS |
| GGACAGTGTGGAAGAGCAAT+TGG | 0.533270 | 3.4:+100246958 | MS.gene68121:CDS |
| ATGGGAATTCAGAGCTTGGT+TGG | 0.535823 | 3.4:-100246873 | None:intergenic |
| GTGCTTGAGCATATTGTTGA+AGG | 0.537863 | 3.4:-100246614 | None:intergenic |
| CTCCGTTATTGGCAAAGTTG+GGG | 0.542346 | 3.4:-100246708 | None:intergenic |
| CTTGGTTGGCAGTATGTGCT+GGG | 0.542382 | 3.4:-100246859 | None:intergenic |
| TCGTGCGGCAGGGAGGCTGT+CGG | 0.545230 | 3.4:+100247128 | MS.gene68121:CDS |
| TCTTGCCATGACGTTATCAC+TGG | 0.546008 | 3.4:+100247081 | MS.gene68121:CDS |
| TGCAGTTGCCCATCCACCTG+TGG | 0.547533 | 3.4:-100246788 | None:intergenic |
| ACCGGCGAATACTGCGGTGA+TGG | 0.555123 | 3.4:+100246523 | MS.gene68121:CDS |
| ACCATCACCGCAGTATTCGC+CGG | 0.557181 | 3.4:-100246524 | None:intergenic |
| GCACATGGGAATTCAGAGCT+TGG | 0.558874 | 3.4:-100246877 | None:intergenic |
| GGTAGGTAGCTAGGTGTCGA+TGG | 0.562523 | 3.4:-100247346 | None:intergenic |
| TGGGAAGCAATACTACGGTA+GGG | 0.563171 | 3.4:+100246903 | MS.gene68121:CDS |
| GAGGCTGTCGGGATACGGTA+CGG | 0.564016 | 3.4:+100247140 | MS.gene68121:CDS |
| ACACGAAACCACAGGTGGAT+GGG | 0.565619 | 3.4:+100246780 | MS.gene68121:CDS |
| CGCGACGACAGTGGGTGTCA+GGG | 0.571723 | 3.4:+100246637 | MS.gene68121:CDS |
| ATGACGTTATCACTGGAAGA+TGG | 0.572215 | 3.4:+100247088 | MS.gene68121:CDS |
| TGCTTTCATCTCAGCTGCCA+AGG | 0.580046 | 3.4:+100246681 | MS.gene68121:CDS |
| GTGATAACGTCATGGCAAGA+TGG | 0.581329 | 3.4:-100247078 | None:intergenic |
| CCCTGGAGATGAGGCTACCA+AGG | 0.583593 | 3.4:-100246588 | None:intergenic |
| TCCTTCAAGTGCAGATCGTG+CGG | 0.587610 | 3.4:+100247113 | MS.gene68121:CDS |
| TATTGCTTCCCAGAAGCACA+TGG | 0.589341 | 3.4:-100246892 | None:intergenic |
| GCTAGGTGTCGATGGAGTTG+AGG | 0.591338 | 3.4:-100247338 | None:intergenic |
| AGCGGTGGTGGTGGTGACCT+TGG | 0.600539 | 3.4:+100246571 | MS.gene68121:CDS |
| CAATGTGGTGGAAGCAGCGG+TGG | 0.602079 | 3.4:+100246556 | MS.gene68121:CDS |
| TAATTCCAAGAGATCTGGAT+GGG | 0.607995 | 3.4:-100246928 | None:intergenic |
| TCAAGCACCGCGACGACAGT+GGG | 0.609911 | 3.4:+100246629 | MS.gene68121:CDS |
| CAAGTGCAGATCGTGCGGCA+GGG | 0.615206 | 3.4:+100247118 | MS.gene68121:CDS |
| AGTCAATGTGGTGGAAGCAG+CGG | 0.617407 | 3.4:+100246553 | MS.gene68121:CDS |
| GCAATGCGGTAAACAAGCTG+GGG | 0.618063 | 3.4:+100246447 | MS.gene68121:CDS |
| CAAACATCACACGAAACCAC+AGG | 0.618152 | 3.4:+100246772 | MS.gene68121:CDS |
| GGGAAGCAATACTACGGTAG+GGG | 0.618995 | 3.4:+100246904 | MS.gene68121:CDS |
| ATCTTCCAGTGATAACGTCA+TGG | 0.619709 | 3.4:-100247086 | None:intergenic |
| GAATGCGGAAGAGGACAGGA+TGG | 0.619759 | 3.4:+100247189 | MS.gene68121:CDS |
| TTTACCGCATTGCTCCGCAA+AGG | 0.620731 | 3.4:-100246437 | None:intergenic |
| GGATGGGCAACTGCACCTGA+TGG | 0.623271 | 3.4:+100246796 | MS.gene68121:CDS |
| GTGACCAACATAATAAATGG+AGG | 0.627198 | 3.4:+100247162 | MS.gene68121:CDS |
| CTTGAAGGATATAACAGGGT+CGG | 0.628462 | 3.4:-100247016 | None:intergenic |
| GTTGTCAATGAAGATGAGGT+TGG | 0.628526 | 3.4:+100246375 | None:intergenic |
| GTCTGTTGTCAATGAAGATG+AGG | 0.630251 | 3.4:+100246371 | None:intergenic |
| CCTTGGTAGCCTCATCTCCA+GGG | 0.635248 | 3.4:+100246588 | MS.gene68121:CDS |
| GTAATTCCAAGAGATCTGGA+TGG | 0.639961 | 3.4:-100246929 | None:intergenic |
| CGGTCTTGAAGGATATAACA+GGG | 0.645313 | 3.4:-100247020 | None:intergenic |
| GTGCAGATCGTGCGGCAGGG+AGG | 0.647018 | 3.4:+100247121 | MS.gene68121:CDS |
| CCTGACACCCACTGTCGTCG+CGG | 0.651496 | 3.4:-100246636 | None:intergenic |
| GAAGGATATAACAGGGTCGG+TGG | 0.652248 | 3.4:-100247013 | None:intergenic |
| ATAAATGGAGGGCTTGAATG+CGG | 0.654818 | 3.4:+100247174 | MS.gene68121:CDS |
| CCTGATGGCCCATATGCTTG+GGG | 0.654850 | 3.4:+100246811 | MS.gene68121:CDS |
| TGAAGGTGTCCCTGGAGATG+AGG | 0.661427 | 3.4:-100246597 | None:intergenic |
| TGACCAACATAATAAATGGA+GGG | 0.665062 | 3.4:+100247163 | MS.gene68121:CDS |
| GCTTCTGGGAAGCAATACTA+CGG | 0.670213 | 3.4:+100246898 | MS.gene68121:CDS |
| ATTGCTTCCCAGAAGCACAT+GGG | 0.672676 | 3.4:-100246891 | None:intergenic |
| ACATCACACGAAACCACAGG+TGG | 0.674219 | 3.4:+100246775 | MS.gene68121:CDS |
| GGATCAACCGGCGAATACTG+CGG | 0.679645 | 3.4:+100246517 | MS.gene68121:CDS |
| TAACAGGGTCGGTGGCTACG+AGG | 0.689767 | 3.4:-100247005 | None:intergenic |
| CAATGCGGTAAACAAGCTGG+GGG | 0.689920 | 3.4:+100246448 | MS.gene68121:CDS |
| AATGAAAGTGAAGATCCGAA+AGG | 0.703939 | 3.4:-100247303 | None:intergenic |
| CAAGATGGCTTAGGTGACTG+GGG | 0.704287 | 3.4:-100247063 | None:intergenic |
| AATTACAACTATGGACAGTG+TGG | 0.706508 | 3.4:+100246946 | MS.gene68121:CDS |
| CGTCATCCAAAACCATAGAG+CGG | 0.713501 | 3.4:-100247040 | None:intergenic |
| GGTTGTCAGAGTCAATGTGG+TGG | 0.713676 | 3.4:+100246544 | MS.gene68121:CDS |
| TGCTCCTTTGCGGAGCAATG+CGG | 0.715396 | 3.4:+100246433 | MS.gene68121:CDS |
| GATGGTTGTCAGAGTCAATG+TGG | 0.748011 | 3.4:+100246541 | MS.gene68121:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACAGTTGTACTTCTAATTAT+AGG | + | chr3.4:100246409-100246428 | MS.gene68121:CDS | 25.0% |
| ! | TTGAGAAAAACAATCAAGAT+TGG | - | chr3.4:100247280-100247299 | None:intergenic | 25.0% |
| !!! | ATCTTGATTGTTTTTCTCAA+AGG | + | chr3.4:100247280-100247299 | MS.gene68121:CDS | 25.0% |
| AAGAGATATTGTGACATACT+TGG | + | chr3.4:100247240-100247259 | MS.gene68121:CDS | 30.0% | |
| ATCTCTTGGAATTACAACTA+TGG | + | chr3.4:100246937-100246956 | MS.gene68121:CDS | 30.0% | |
| TGACCAACATAATAAATGGA+GGG | + | chr3.4:100247163-100247182 | MS.gene68121:CDS | 30.0% | |
| !!! | AGCAATCTCTCTTTTTTTAG+TGG | - | chr3.4:100246740-100246759 | None:intergenic | 30.0% |
| AAGCCCTCCATTTATTATGT+TGG | - | chr3.4:100247169-100247188 | None:intergenic | 35.0% | |
| AATGAAAGTGAAGATCCGAA+AGG | - | chr3.4:100247306-100247325 | None:intergenic | 35.0% | |
| AATTACAACTATGGACAGTG+TGG | + | chr3.4:100246946-100246965 | MS.gene68121:CDS | 35.0% | |
| AATTATAGGATGCTCCTTTG+CGG | + | chr3.4:100246423-100246442 | MS.gene68121:CDS | 35.0% | |
| ACGGTGACCAACATAATAAA+TGG | + | chr3.4:100247159-100247178 | MS.gene68121:CDS | 35.0% | |
| AGTTGTAATTCCAAGAGATC+TGG | - | chr3.4:100246936-100246955 | None:intergenic | 35.0% | |
| GTGACCAACATAATAAATGG+AGG | + | chr3.4:100247162-100247181 | MS.gene68121:CDS | 35.0% | |
| TAATTCCAAGAGATCTGGAT+GGG | - | chr3.4:100246931-100246950 | None:intergenic | 35.0% | |
| TATTGTGACATACTTGGAGT+TGG | + | chr3.4:100247246-100247265 | MS.gene68121:CDS | 35.0% | |
| ! | TGTTTTTCTCAAAGGCCTTT+CGG | + | chr3.4:100247288-100247307 | MS.gene68121:CDS | 35.0% |
| AAACAGTATCCCCAAGCATA+TGG | - | chr3.4:100246823-100246842 | None:intergenic | 40.0% | |
| AACAGTATCCCCAAGCATAT+GGG | - | chr3.4:100246822-100246841 | None:intergenic | 40.0% | |
| ATAAATGGAGGGCTTGAATG+CGG | + | chr3.4:100247174-100247193 | MS.gene68121:CDS | 40.0% | |
| ATCTCCGTTATTGGCAAAGT+TGG | - | chr3.4:100246713-100246732 | None:intergenic | 40.0% | |
| ATGACGTTATCACTGGAAGA+TGG | + | chr3.4:100247088-100247107 | MS.gene68121:CDS | 40.0% | |
| CGGTCTTGAAGGATATAACA+GGG | - | chr3.4:100247023-100247042 | None:intergenic | 40.0% | |
| CTTGAAGGATATAACAGGGT+CGG | - | chr3.4:100247019-100247038 | None:intergenic | 40.0% | |
| GACATACTTGGAGTTGGATA+CGG | + | chr3.4:100247252-100247271 | MS.gene68121:CDS | 40.0% | |
| GGATTATGTTGCAGCAAGTT+TGG | + | chr3.4:100246487-100246506 | MS.gene68121:CDS | 40.0% | |
| GTAATTCCAAGAGATCTGGA+TGG | - | chr3.4:100246932-100246951 | None:intergenic | 40.0% | |
| GTGCTTGAGCATATTGTTGA+AGG | - | chr3.4:100246617-100246636 | None:intergenic | 40.0% | |
| TATGTTGCAGCAAGTTTGGT+TGG | + | chr3.4:100246491-100246510 | MS.gene68121:CDS | 40.0% | |
| TCTCCGTTATTGGCAAAGTT+GGG | - | chr3.4:100246712-100246731 | None:intergenic | 40.0% | |
| TTCCCCAACTTTGCCAATAA+CGG | + | chr3.4:100246706-100246725 | MS.gene68121:CDS | 40.0% | |
| ! | ATCTTCCAGTGATAACGTCA+TGG | - | chr3.4:100247089-100247108 | None:intergenic | 40.0% |
| !! | AAGAGAGATTGCTGCTTTCT+TGG | + | chr3.4:100246747-100246766 | MS.gene68121:CDS | 40.0% |
| !! | AGAGAGATTGCTGCTTTCTT+GGG | + | chr3.4:100246748-100246767 | MS.gene68121:CDS | 40.0% |
| !! | AGCTGAGATGAAAGCATCAT+AGG | - | chr3.4:100246677-100246696 | None:intergenic | 40.0% |
| AAACCATAGAGCGGTCTTGA+AGG | - | chr3.4:100247034-100247053 | None:intergenic | 45.0% | |
| AGCAATGCGGTAAACAAGCT+GGG | + | chr3.4:100246446-100246465 | MS.gene68121:CDS | 45.0% | |
| AGTGGCAGTATCTCCGTTAT+TGG | - | chr3.4:100246722-100246741 | None:intergenic | 45.0% | |
| ATGGGAATTCAGAGCTTGGT+TGG | - | chr3.4:100246876-100246895 | None:intergenic | 45.0% | |
| CAAACATCACACGAAACCAC+AGG | + | chr3.4:100246772-100246791 | MS.gene68121:CDS | 45.0% | |
| CGTCATCCAAAACCATAGAG+CGG | - | chr3.4:100247043-100247062 | None:intergenic | 45.0% | |
| CTCCGTTATTGGCAAAGTTG+GGG | - | chr3.4:100246711-100246730 | None:intergenic | 45.0% | |
| CTGAATTCCCATGTGCTTCT+GGG | + | chr3.4:100246884-100246903 | MS.gene68121:CDS | 45.0% | |
| GATGGTTGTCAGAGTCAATG+TGG | + | chr3.4:100246541-100246560 | MS.gene68121:CDS | 45.0% | |
| GCGGTCTTGAAGGATATAAC+AGG | - | chr3.4:100247024-100247043 | None:intergenic | 45.0% | |
| TATCCTTCAAGACCGCTCTA+TGG | + | chr3.4:100247028-100247047 | MS.gene68121:CDS | 45.0% | |
| TCTGAATTCCCATGTGCTTC+TGG | + | chr3.4:100246883-100246902 | MS.gene68121:CDS | 45.0% | |
| TCTTGCCATGACGTTATCAC+TGG | + | chr3.4:100247081-100247100 | MS.gene68121:CDS | 45.0% | |
| TGGGAAGCAATACTACGGTA+GGG | + | chr3.4:100246903-100246922 | MS.gene68121:CDS | 45.0% | |
| ! | ATTGCTTCCCAGAAGCACAT+GGG | - | chr3.4:100246894-100246913 | None:intergenic | 45.0% |
| ! | GCTTCTGGGAAGCAATACTA+CGG | + | chr3.4:100246898-100246917 | MS.gene68121:CDS | 45.0% |
| ! | GGAAGAGTGCAAGATCGAAT+TGG | + | chr3.4:100247210-100247229 | MS.gene68121:CDS | 45.0% |
| ! | GTGATAACGTCATGGCAAGA+TGG | - | chr3.4:100247081-100247100 | None:intergenic | 45.0% |
| ! | TATTGCTTCCCAGAAGCACA+TGG | - | chr3.4:100246895-100246914 | None:intergenic | 45.0% |
| ! | TCAAGACCGCTCTATGGTTT+TGG | + | chr3.4:100247034-100247053 | MS.gene68121:CDS | 45.0% |
| ! | TTTGGTTGGTGTGGATCAAC+CGG | + | chr3.4:100246505-100246524 | MS.gene68121:CDS | 45.0% |
| !! | CATATTGTTGAAGGTGTCCC+TGG | - | chr3.4:100246608-100246627 | None:intergenic | 45.0% |
| ACACGAAACCACAGGTGGAT+GGG | + | chr3.4:100246780-100246799 | MS.gene68121:CDS | 50.0% | |
| ACAGTGGGTGTCAGGGAAAA+GGG | + | chr3.4:100246644-100246663 | MS.gene68121:CDS | 50.0% | |
| ACATCACACGAAACCACAGG+TGG | + | chr3.4:100246775-100246794 | MS.gene68121:CDS | 50.0% | |
| ACCTGATGGCCCATATGCTT+GGG | + | chr3.4:100246810-100246829 | MS.gene68121:CDS | 50.0% | |
| ACGTCATGGCAAGATGGCTT+AGG | - | chr3.4:100247075-100247094 | None:intergenic | 50.0% | |
| CAAGATGGCTTAGGTGACTG+GGG | - | chr3.4:100247066-100247085 | None:intergenic | 50.0% | |
| CAATGCGGTAAACAAGCTGG+GGG | + | chr3.4:100246448-100246467 | MS.gene68121:CDS | 50.0% | |
| CTGGGAAGCAATACTACGGT+AGG | + | chr3.4:100246902-100246921 | MS.gene68121:CDS | 50.0% | |
| CTTGGTTGGCAGTATGTGCT+GGG | - | chr3.4:100246862-100246881 | None:intergenic | 50.0% | |
| GAAGGATATAACAGGGTCGG+TGG | - | chr3.4:100247016-100247035 | None:intergenic | 50.0% | |
| GAGCAATGCGGTAAACAAGC+TGG | + | chr3.4:100246445-100246464 | MS.gene68121:CDS | 50.0% | |
| GCAAGATGGCTTAGGTGACT+GGG | - | chr3.4:100247067-100247086 | None:intergenic | 50.0% | |
| GCAATGCGGTAAACAAGCTG+GGG | + | chr3.4:100246447-100246466 | MS.gene68121:CDS | 50.0% | |
| GCACATGGGAATTCAGAGCT+TGG | - | chr3.4:100246880-100246899 | None:intergenic | 50.0% | |
| GGACAGTGTGGAAGAGCAAT+TGG | + | chr3.4:100246958-100246977 | MS.gene68121:CDS | 50.0% | |
| GGGAAGCAATACTACGGTAG+GGG | + | chr3.4:100246904-100246923 | MS.gene68121:CDS | 50.0% | |
| GGTTGTCAGAGTCAATGTGG+TGG | + | chr3.4:100246544-100246563 | MS.gene68121:CDS | 50.0% | |
| GTCGATGGAGTTGAGGAAGA+GGG | - | chr3.4:100247334-100247353 | None:intergenic | 50.0% | |
| TCCTTCAAGTGCAGATCGTG+CGG | + | chr3.4:100247113-100247132 | MS.gene68121:CDS | 50.0% | |
| TGCTGCAACATAATCCCCCT+GGG | - | chr3.4:100246483-100246502 | None:intergenic | 50.0% | |
| TGCTTTCATCTCAGCTGCCA+AGG | + | chr3.4:100246681-100246700 | MS.gene68121:CDS | 50.0% | |
| TGTCGATGGAGTTGAGGAAG+AGG | - | chr3.4:100247335-100247354 | None:intergenic | 50.0% | |
| TTGCTGCAACATAATCCCCC+TGG | - | chr3.4:100246484-100246503 | None:intergenic | 50.0% | |
| TTTACCGCATTGCTCCGCAA+AGG | - | chr3.4:100246440-100246459 | None:intergenic | 50.0% | |
| ! | AGTCAATGTGGTGGAAGCAG+CGG | + | chr3.4:100246553-100246572 | MS.gene68121:CDS | 50.0% |
| ! | TGCAGCAAGTTTGGTTGGTG+TGG | + | chr3.4:100246496-100246515 | MS.gene68121:CDS | 50.0% |
| ACCATCACCGCAGTATTCGC+CGG | - | chr3.4:100246527-100246546 | None:intergenic | 55.0% | |
| CACACGAAACCACAGGTGGA+TGG | + | chr3.4:100246779-100246798 | MS.gene68121:CDS | 55.0% | |
| CACCTGATGGCCCATATGCT+TGG | + | chr3.4:100246809-100246828 | MS.gene68121:CDS | 55.0% | |
| CCTGATGGCCCATATGCTTG+GGG | + | chr3.4:100246811-100246830 | MS.gene68121:CDS | 55.0% | |
| GAATGCGGAAGAGGACAGGA+TGG | + | chr3.4:100247189-100247208 | MS.gene68121:CDS | 55.0% | |
| GACAGTGGGTGTCAGGGAAA+AGG | + | chr3.4:100246643-100246662 | MS.gene68121:CDS | 55.0% | |
| GCTTGAATGCGGAAGAGGAC+AGG | + | chr3.4:100247185-100247204 | MS.gene68121:CDS | 55.0% | |
| GCTTGGTTGGCAGTATGTGC+TGG | - | chr3.4:100246863-100246882 | None:intergenic | 55.0% | |
| GGATCAACCGGCGAATACTG+CGG | + | chr3.4:100246517-100246536 | MS.gene68121:CDS | 55.0% | |
| GGCAAGATGGCTTAGGTGAC+TGG | - | chr3.4:100247068-100247087 | None:intergenic | 55.0% | |
| TGCTCCTTTGCGGAGCAATG+CGG | + | chr3.4:100246433-100246452 | MS.gene68121:CDS | 55.0% | |
| ! | ACCTTGGTAGCCTCATCTCC+AGG | + | chr3.4:100246587-100246606 | MS.gene68121:CDS | 55.0% |
| ! | CCTTGGTAGCCTCATCTCCA+GGG | + | chr3.4:100246588-100246607 | MS.gene68121:CDS | 55.0% |
| !! | TGAAGGTGTCCCTGGAGATG+AGG | - | chr3.4:100246600-100246619 | None:intergenic | 55.0% |
| ACCGGCGAATACTGCGGTGA+TGG | + | chr3.4:100246523-100246542 | MS.gene68121:CDS | 60.0% | |
| CAAGTGCAGATCGTGCGGCA+GGG | + | chr3.4:100247118-100247137 | MS.gene68121:CDS | 60.0% | |
| CCCCAAGCATATGGGCCATC+AGG | - | chr3.4:100246814-100246833 | None:intergenic | 60.0% | |
| CCCTGGAGATGAGGCTACCA+AGG | - | chr3.4:100246591-100246610 | None:intergenic | 60.0% | |
| GAGGCTGTCGGGATACGGTA+CGG | + | chr3.4:100247140-100247159 | MS.gene68121:CDS | 60.0% | |
| GCCGCACGATCTGCACTTGA+AGG | - | chr3.4:100247117-100247136 | None:intergenic | 60.0% | |
| GGAGGGCTTGAATGCGGAAG+AGG | + | chr3.4:100247180-100247199 | MS.gene68121:CDS | 60.0% | |
| GGATGGGCAACTGCACCTGA+TGG | + | chr3.4:100246796-100246815 | MS.gene68121:CDS | 60.0% | |
| GGCAAAGTTGGGGAACGCCT+TGG | - | chr3.4:100246701-100246720 | None:intergenic | 60.0% | |
| GGGGTCCCATCCAGATCTCT+TGG | + | chr3.4:100246923-100246942 | MS.gene68121:CDS | 60.0% | |
| TAACAGGGTCGGTGGCTACG+AGG | - | chr3.4:100247008-100247027 | None:intergenic | 60.0% | |
| TCAAGTGCAGATCGTGCGGC+AGG | + | chr3.4:100247117-100247136 | MS.gene68121:CDS | 60.0% | |
| TGCAGTTGCCCATCCACCTG+TGG | - | chr3.4:100246791-100246810 | None:intergenic | 60.0% | |
| ! | CAATGTGGTGGAAGCAGCGG+TGG | + | chr3.4:100246556-100246575 | MS.gene68121:CDS | 60.0% |
| ! | TCAAGCACCGCGACGACAGT+GGG | + | chr3.4:100246629-100246648 | MS.gene68121:CDS | 60.0% |
| CCTGACACCCACTGTCGTCG+CGG | - | chr3.4:100246639-100246658 | None:intergenic | 65.0% | |
| CGCGACGACAGTGGGTGTCA+GGG | + | chr3.4:100246637-100246656 | MS.gene68121:CDS | 65.0% | |
| GCAGGGAGGCTGTCGGGATA+CGG | + | chr3.4:100247135-100247154 | MS.gene68121:CDS | 65.0% | |
| ! | CTCAAGCACCGCGACGACAG+TGG | + | chr3.4:100246628-100246647 | MS.gene68121:CDS | 65.0% |
| ! | TGTGGTGGAAGCAGCGGTGG+TGG | + | chr3.4:100246559-100246578 | MS.gene68121:CDS | 65.0% |
| !! | AGCGGTGGTGGTGGTGACCT+TGG | + | chr3.4:100246571-100246590 | MS.gene68121:CDS | 65.0% |
| CCGCGACGACAGTGGGTGTC+AGG | + | chr3.4:100246636-100246655 | MS.gene68121:CDS | 70.0% | |
| GGGTCGGTGGCTACGAGGTC+TGG | - | chr3.4:100247003-100247022 | None:intergenic | 70.0% | |
| GTGCAGATCGTGCGGCAGGG+AGG | + | chr3.4:100247121-100247140 | MS.gene68121:CDS | 70.0% | |
| TCGTGCGGCAGGGAGGCTGT+CGG | + | chr3.4:100247128-100247147 | MS.gene68121:CDS | 70.0% | |
| ! | CTGGGGGTGCGTTGTGCCCA+GGG | + | chr3.4:100246464-100246483 | MS.gene68121:CDS | 70.0% |
| ! | GGTGGAAGCAGCGGTGGTGG+TGG | + | chr3.4:100246562-100246581 | MS.gene68121:CDS | 70.0% |
| ! | TGGGGGTGCGTTGTGCCCAG+GGG | + | chr3.4:100246465-100246484 | MS.gene68121:CDS | 70.0% |
| CGTGCGGCAGGGAGGCTGTC+GGG | + | chr3.4:100247129-100247148 | MS.gene68121:CDS | 75.0% | |
| ! | GCTGGGGGTGCGTTGTGCCC+AGG | + | chr3.4:100246463-100246482 | MS.gene68121:CDS | 75.0% |
| ! | GGGGGTGCGTTGTGCCCAGG+GGG | + | chr3.4:100246466-100246485 | MS.gene68121:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 100246382 | 100247359 | 100246382 | ID=MS.gene68121 |
| chr3.4 | mRNA | 100246382 | 100247359 | 100246382 | ID=MS.gene68121.t1;Parent=MS.gene68121 |
| chr3.4 | exon | 100246382 | 100247359 | 100246382 | ID=MS.gene68121.t1.exon1;Parent=MS.gene68121.t1 |
| chr3.4 | CDS | 100246382 | 100247359 | 100246382 | ID=cds.MS.gene68121.t1;Parent=MS.gene68121.t1 |
| Gene Sequence |
| Protein sequence |
