Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88667.t1 | XP_024629922.1 | 96.2 | 133 | 5 | 0 | 1 | 133 | 1 | 133 | 1.20E-61 | 245.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88667.t1 | C6SZ04 | 65.4 | 133 | 42 | 2 | 1 | 133 | 1 | 129 | 7.9e-38 | 157.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88667.t1 | A0A072TPZ4 | 96.2 | 133 | 5 | 0 | 1 | 133 | 1 | 133 | 8.7e-62 | 245.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene88667 | 0.818412 | 1.99E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene88667 | 0.813903 | 2.02E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene88667 | 0.8272 | 1.78E-54 | -1.69E-46 |
| MS.gene049346 | MS.gene88667 | 0.840792 | 7.02E-58 | -1.69E-46 |
| MS.gene049351 | MS.gene88667 | 0.822413 | 2.40E-53 | -1.69E-46 |
| MS.gene049356 | MS.gene88667 | 0.80662 | 7.53E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene88667 | 0.826164 | 3.15E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene88667 | 0.870205 | 1.74E-66 | -1.69E-46 |
| MS.gene049910 | MS.gene88667 | 0.816055 | 6.74E-52 | -1.69E-46 |
| MS.gene050128 | MS.gene88667 | 0.855444 | 6.28E-62 | -1.69E-46 |
| MS.gene050168 | MS.gene88667 | 0.814977 | 1.17E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene88667 | 0.803748 | 3.01E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene88667 | 0.889832 | 1.70E-73 | -1.69E-46 |
| MS.gene050397 | MS.gene88667 | 0.809688 | 1.67E-50 | -1.69E-46 |
| MS.gene050558 | MS.gene88667 | 0.819573 | 1.08E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene88667 | 0.80203 | 6.81E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene88667 | 0.823507 | 1.33E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene88667 | 0.824834 | 6.51E-54 | -1.69E-46 |
| MS.gene050971 | MS.gene88667 | 0.803211 | 3.88E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene88667 | 0.815172 | 1.06E-51 | -1.69E-46 |
| MS.gene051253 | MS.gene88667 | 0.814724 | 1.33E-51 | -1.69E-46 |
| MS.gene051255 | MS.gene88667 | 0.807641 | 4.58E-50 | -1.69E-46 |
| MS.gene051360 | MS.gene88667 | 0.830631 | 2.63E-55 | -1.69E-46 |
| MS.gene051663 | MS.gene88667 | 0.821119 | 4.78E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene88667 | 0.858078 | 1.05E-62 | -1.69E-46 |
| MS.gene052011 | MS.gene88667 | -0.820245 | 7.59E-53 | -1.69E-46 |
| MS.gene052077 | MS.gene88667 | 0.817866 | 2.64E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene88667 | 0.80323 | 3.85E-49 | -1.69E-46 |
| MS.gene052178 | MS.gene88667 | 0.831789 | 1.37E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene88667 | 0.842179 | 3.03E-58 | -1.69E-46 |
| MS.gene052207 | MS.gene88667 | 0.828994 | 6.60E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene88667 | 0.86011 | 2.60E-63 | -1.69E-46 |
| MS.gene052310 | MS.gene88667 | 0.810733 | 9.95E-51 | -1.69E-46 |
| MS.gene052326 | MS.gene88667 | 0.804216 | 2.40E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene88667 | 0.853939 | 1.71E-61 | -1.69E-46 |
| MS.gene052485 | MS.gene88667 | 0.810362 | 1.20E-50 | -1.69E-46 |
| MS.gene053073 | MS.gene88667 | 0.808647 | 2.79E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene88667 | 0.836402 | 9.55E-57 | -1.69E-46 |
| MS.gene053209 | MS.gene88667 | 0.838376 | 2.98E-57 | -1.69E-46 |
| MS.gene053555 | MS.gene88667 | 0.801822 | 7.51E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene88667 | 0.828096 | 1.09E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene88667 | 0.870908 | 1.02E-66 | -1.69E-46 |
| MS.gene053928 | MS.gene88667 | 0.858894 | 6.02E-63 | -1.69E-46 |
| MS.gene054010 | MS.gene88667 | 0.86959 | 2.76E-66 | -1.69E-46 |
| MS.gene054011 | MS.gene88667 | 0.900157 | 9.70E-78 | -1.69E-46 |
| MS.gene054012 | MS.gene88667 | 0.887807 | 1.03E-72 | -1.69E-46 |
| MS.gene054013 | MS.gene88667 | 0.885532 | 7.50E-72 | -1.69E-46 |
| MS.gene054123 | MS.gene88667 | 0.846091 | 2.70E-59 | -1.69E-46 |
| MS.gene054183 | MS.gene88667 | 0.83117 | 1.94E-55 | -1.69E-46 |
| MS.gene054184 | MS.gene88667 | 0.80584 | 1.10E-49 | -1.69E-46 |
| MS.gene054185 | MS.gene88667 | 0.804677 | 1.93E-49 | -1.69E-46 |
| MS.gene054214 | MS.gene88667 | 0.811464 | 6.91E-51 | -1.69E-46 |
| MS.gene054349 | MS.gene88667 | 0.826149 | 3.18E-54 | -1.69E-46 |
| MS.gene054379 | MS.gene88667 | 0.817078 | 3.97E-52 | -1.69E-46 |
| MS.gene054473 | MS.gene88667 | 0.836877 | 7.23E-57 | -1.69E-46 |
| MS.gene054542 | MS.gene88667 | 0.810488 | 1.12E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene88667 | 0.814582 | 1.43E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene88667 | 0.824709 | 6.97E-54 | -1.69E-46 |
| MS.gene054618 | MS.gene88667 | 0.802771 | 4.79E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene88667 | 0.803121 | 4.05E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene88667 | 0.842501 | 2.49E-58 | -1.69E-46 |
| MS.gene055277 | MS.gene88667 | 0.852582 | 4.20E-61 | -1.69E-46 |
| MS.gene055390 | MS.gene88667 | 0.831214 | 1.89E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene88667 | 0.853244 | 2.72E-61 | -1.69E-46 |
| MS.gene055428 | MS.gene88667 | 0.835415 | 1.70E-56 | -1.69E-46 |
| MS.gene05553 | MS.gene88667 | 0.823655 | 1.23E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene88667 | 0.902569 | 8.48E-79 | -1.69E-46 |
| MS.gene055666 | MS.gene88667 | 0.806831 | 6.79E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene88667 | 0.849856 | 2.47E-60 | -1.69E-46 |
| MS.gene056407 | MS.gene88667 | 0.827128 | 1.86E-54 | -1.69E-46 |
| MS.gene056410 | MS.gene88667 | 0.823462 | 1.37E-53 | -1.69E-46 |
| MS.gene056612 | MS.gene88667 | 0.827222 | 1.76E-54 | -1.69E-46 |
| MS.gene056659 | MS.gene88667 | 0.811875 | 5.63E-51 | -1.69E-46 |
| MS.gene056723 | MS.gene88667 | 0.804209 | 2.41E-49 | -1.69E-46 |
| MS.gene056875 | MS.gene88667 | 0.805744 | 1.15E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene88667 | 0.865836 | 4.42E-65 | -1.69E-46 |
| MS.gene056931 | MS.gene88667 | 0.809259 | 2.07E-50 | -1.69E-46 |
| MS.gene056933 | MS.gene88667 | 0.809286 | 2.04E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene88667 | 0.859513 | 3.93E-63 | -1.69E-46 |
| MS.gene057121 | MS.gene88667 | 0.809955 | 1.46E-50 | -1.69E-46 |
| MS.gene05733 | MS.gene88667 | 0.818412 | 1.99E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene88667 | 0.830944 | 2.21E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene88667 | 0.823475 | 1.36E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene88667 | 0.807565 | 4.75E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene88667 | 0.828846 | 7.16E-55 | -1.69E-46 |
| MS.gene057469 | MS.gene88667 | 0.85208 | 5.84E-61 | -1.69E-46 |
| MS.gene057749 | MS.gene88667 | 0.815296 | 9.94E-52 | -1.69E-46 |
| MS.gene057752 | MS.gene88667 | 0.826737 | 2.30E-54 | -1.69E-46 |
| MS.gene057754 | MS.gene88667 | 0.808304 | 3.31E-50 | -1.69E-46 |
| MS.gene057796 | MS.gene88667 | 0.81965 | 1.04E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene88667 | 0.811068 | 8.42E-51 | -1.69E-46 |
| MS.gene057929 | MS.gene88667 | 0.82397 | 1.04E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene88667 | 0.854975 | 8.60E-62 | -1.69E-46 |
| MS.gene058082 | MS.gene88667 | 0.801156 | 1.03E-48 | -1.69E-46 |
| MS.gene05811 | MS.gene88667 | 0.86694 | 1.97E-65 | -1.69E-46 |
| MS.gene058142 | MS.gene88667 | 0.823357 | 1.45E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene88667 | 0.812879 | 3.39E-51 | -1.69E-46 |
| MS.gene05842 | MS.gene88667 | 0.823661 | 1.23E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene88667 | 0.82143 | 4.05E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene88667 | 0.816707 | 4.81E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene88667 | 0.800167 | 1.64E-48 | -1.69E-46 |
| MS.gene058928 | MS.gene88667 | 0.802377 | 5.77E-49 | -1.69E-46 |
| MS.gene058949 | MS.gene88667 | 0.827413 | 1.59E-54 | -1.69E-46 |
| MS.gene058995 | MS.gene88667 | 0.81177 | 5.93E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene88667 | 0.876617 | 1.21E-68 | -1.69E-46 |
| MS.gene059294 | MS.gene88667 | 0.82957 | 4.78E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene88667 | 0.837025 | 6.63E-57 | -1.69E-46 |
| MS.gene059462 | MS.gene88667 | 0.825569 | 4.36E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene88667 | 0.824275 | 8.82E-54 | -1.69E-46 |
| MS.gene059597 | MS.gene88667 | 0.843114 | 1.71E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene88667 | 0.80206 | 6.71E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene88667 | 0.844436 | 7.57E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene88667 | 0.853561 | 2.20E-61 | -1.69E-46 |
| MS.gene059695 | MS.gene88667 | 0.852405 | 4.72E-61 | -1.69E-46 |
| MS.gene059807 | MS.gene88667 | 0.805432 | 1.34E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene88667 | 0.845267 | 4.52E-59 | -1.69E-46 |
| MS.gene059876 | MS.gene88667 | 0.812367 | 4.39E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene88667 | 0.826934 | 2.07E-54 | -1.69E-46 |
| MS.gene059974 | MS.gene88667 | 0.831287 | 1.82E-55 | -1.69E-46 |
| MS.gene060005 | MS.gene88667 | 0.804199 | 2.42E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene88667 | 0.874755 | 5.27E-68 | -1.69E-46 |
| MS.gene060476 | MS.gene88667 | 0.807437 | 5.06E-50 | -1.69E-46 |
| MS.gene060495 | MS.gene88667 | 0.833095 | 6.49E-56 | -1.69E-46 |
| MS.gene060559 | MS.gene88667 | 0.818988 | 1.47E-52 | -1.69E-46 |
| MS.gene060569 | MS.gene88667 | 0.803403 | 3.54E-49 | -1.69E-46 |
| MS.gene060986 | MS.gene88667 | 0.818761 | 1.66E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene88667 | 0.890032 | 1.42E-73 | -1.69E-46 |
| MS.gene061051 | MS.gene88667 | -0.809771 | 1.60E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene88667 | 0.803333 | 3.67E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88667.t1 | MTR_0693s0030 | 96.241 | 133 | 5 | 0 | 1 | 133 | 1 | 133 | 5.02e-91 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88667.t1 | AT4G25830 | 33.333 | 129 | 77 | 2 | 4 | 132 | 3 | 122 | 1.06e-17 | 75.1 |
| MS.gene88667.t1 | AT4G16442 | 33.333 | 135 | 81 | 3 | 1 | 133 | 4 | 131 | 3.94e-12 | 60.8 |
Find 17 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTGAAATTCCGTATTGT+AGG | 0.365530 | 8.1:-4438289 | None:intergenic |
| TATGTGACATCTGCAGCTGC+TGG | 0.381099 | 8.1:+4438223 | MS.gene88667:CDS |
| CCTACAATACGGAATTTCAA+TGG | 0.448706 | 8.1:+4438289 | MS.gene88667:CDS |
| CTTATTATATGCACATGGCT+TGG | 0.454545 | 8.1:+4438314 | MS.gene88667:CDS |
| GATTAGTTTCTTATTAGATC+AGG | 0.461935 | 8.1:+4438336 | MS.gene88667:CDS |
| TCTCAGCTTGTCCTACAATA+CGG | 0.494365 | 8.1:+4438278 | MS.gene88667:CDS |
| AAACTTCTCCTCTAGCCATT+CGG | 0.500585 | 8.1:-4437968 | None:intergenic |
| TGTTGCATACCTTCATCCAC+TGG | 0.513091 | 8.1:-4438912 | None:intergenic |
| GAAAGCTACTTACAAGGACT+TGG | 0.522093 | 8.1:+4438085 | MS.gene88667:CDS |
| TTCAAATGCTGAAGTGTTTG+TGG | 0.537098 | 8.1:-4438854 | None:intergenic |
| ATGTGACATCTGCAGCTGCT+GGG | 0.542822 | 8.1:+4438224 | MS.gene88667:CDS |
| AGAAGCATTCCAGTGGATGA+AGG | 0.566952 | 8.1:+4438903 | MS.gene88667:CDS |
| TAAGAAGAAAGCTACTTACA+AGG | 0.592857 | 8.1:+4438079 | MS.gene88667:CDS |
| TGGTTCTTATTATATGCACA+TGG | 0.599744 | 8.1:+4438309 | MS.gene88667:CDS |
| TGAAGAAATGGAATTCCGAA+TGG | 0.602583 | 8.1:+4437953 | None:intergenic |
| ATGGAATTCCGAATGGCTAG+AGG | 0.629083 | 8.1:+4437960 | MS.gene88667:CDS |
| CTGGATCAGAAGCATTCCAG+TGG | 0.661575 | 8.1:+4438896 | MS.gene88667:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAAAATTGAATGAC+AGG | + | chr8.1:4438567-4438586 | MS.gene88667:intron | 15.0% |
| !! | AAAATTAAAATTGAATGACA+GGG | + | chr8.1:4438568-4438587 | MS.gene88667:intron | 15.0% |
| !! | TACTTATACATGATAATATA+AGG | + | chr8.1:4438497-4438516 | MS.gene88667:intron | 15.0% |
| !!! | AAAAAGATAATCATTTTGTT+TGG | + | chr8.1:4438604-4438623 | MS.gene88667:intron | 15.0% |
| !!! | GAATTTTTGTATGTTTTTTT+AGG | + | chr8.1:4438191-4438210 | MS.gene88667:intron | 15.0% |
| ! | AAATTCCTAATTCAAGATCA+TGG | - | chr8.1:4438177-4438196 | None:intergenic | 25.0% |
| ! | AATAATCATTTGGCAAATCT+TGG | + | chr8.1:4438796-4438815 | MS.gene88667:intron | 25.0% |
| ! | AGAGAACAAACAAATAAAGA+GGG | - | chr8.1:4438131-4438150 | None:intergenic | 25.0% |
| ! | ATATACCATGATCTTGAATT+AGG | + | chr8.1:4438169-4438188 | MS.gene88667:intron | 25.0% |
| ! | CCAAATGATTATTTCAATCA+AGG | - | chr8.1:4438789-4438808 | None:intergenic | 25.0% |
| ! | CCTTGATTGAAATAATCATT+TGG | + | chr8.1:4438786-4438805 | MS.gene88667:intron | 25.0% |
| ! | TACTCGAATCAAAATAAACT+TGG | + | chr8.1:4438471-4438490 | MS.gene88667:intron | 25.0% |
| ! | TCATTTCCTCTTCAAAAATT+AGG | + | chr8.1:4438524-4438543 | MS.gene88667:intron | 25.0% |
| ! | TGATATCATAGCCATTAAAA+TGG | - | chr8.1:4438995-4439014 | None:intergenic | 25.0% |
| !! | ATTATCTTTTTCTTCCTACT+GGG | - | chr8.1:4438595-4438614 | None:intergenic | 25.0% |
| !! | CTATATAGCATCCATTTTAA+TGG | + | chr8.1:4438981-4439000 | MS.gene88667:intron | 25.0% |
| !!! | GATTAGTTTCTTATTAGATC+AGG | + | chr8.1:4438336-4438355 | MS.gene88667:CDS | 25.0% |
| AAGTAAGCTCAAATCCAATT+AGG | + | chr8.1:4438448-4438467 | MS.gene88667:intron | 30.0% | |
| GAGAGAACAAACAAATAAAG+AGG | - | chr8.1:4438132-4438151 | None:intergenic | 30.0% | |
| GCATAACTCTTAAAGTAGTT+AGG | + | chr8.1:4438696-4438715 | MS.gene88667:intron | 30.0% | |
| TAAGAAGAAAGCTACTTACA+AGG | + | chr8.1:4438079-4438098 | MS.gene88667:CDS | 30.0% | |
| TGGTTCTTATTATATGCACA+TGG | + | chr8.1:4438309-4438328 | MS.gene88667:CDS | 30.0% | |
| ! | GATTATCTTTTTCTTCCTAC+TGG | - | chr8.1:4438596-4438615 | None:intergenic | 30.0% |
| ! | TGCTTTTGATACTGAAACAA+AGG | + | chr8.1:4438040-4438059 | MS.gene88667:CDS | 30.0% |
| !! | GAGATACCTAATTTTTGAAG+AGG | - | chr8.1:4438533-4438552 | None:intergenic | 30.0% |
| !! | TTTTGATTCGAGTACCTAAT+TGG | - | chr8.1:4438465-4438484 | None:intergenic | 30.0% |
| ATAATAATGCCCCTCCAATT+TGG | - | chr8.1:4438957-4438976 | None:intergenic | 35.0% | |
| CCATTGAAATTCCGTATTGT+AGG | - | chr8.1:4438292-4438311 | None:intergenic | 35.0% | |
| CCTACAATACGGAATTTCAA+TGG | + | chr8.1:4438289-4438308 | MS.gene88667:CDS | 35.0% | |
| CTTATTATATGCACATGGCT+TGG | + | chr8.1:4438314-4438333 | MS.gene88667:CDS | 35.0% | |
| ! | TTCAAATGCTGAAGTGTTTG+TGG | - | chr8.1:4438857-4438876 | None:intergenic | 35.0% |
| AAACTTCTCCTCTAGCCATT+CGG | - | chr8.1:4437971-4437990 | None:intergenic | 40.0% | |
| ACCAGATTCTGCTACCAAAT+TGG | + | chr8.1:4438940-4438959 | MS.gene88667:intron | 40.0% | |
| AGATTCTGCTACCAAATTGG+AGG | + | chr8.1:4438943-4438962 | MS.gene88667:intron | 40.0% | |
| ATTCTGCTACCAAATTGGAG+GGG | + | chr8.1:4438945-4438964 | MS.gene88667:intron | 40.0% | |
| GAAAGCTACTTACAAGGACT+TGG | + | chr8.1:4438085-4438104 | MS.gene88667:CDS | 40.0% | |
| GATTCTGCTACCAAATTGGA+GGG | + | chr8.1:4438944-4438963 | MS.gene88667:intron | 40.0% | |
| TCCAGTAAGTGCAAAAAGAC+AGG | - | chr8.1:4438881-4438900 | None:intergenic | 40.0% | |
| TCTCAGCTTGTCCTACAATA+CGG | + | chr8.1:4438278-4438297 | MS.gene88667:CDS | 40.0% | |
| ! | TCCAATTTGGTAGCAGAATC+TGG | - | chr8.1:4438944-4438963 | None:intergenic | 40.0% |
| ATGGAATTCCGAATGGCTAG+AGG | + | chr8.1:4437960-4437979 | MS.gene88667:CDS | 45.0% | |
| TGTTGCATACCTTCATCCAC+TGG | - | chr8.1:4438915-4438934 | None:intergenic | 45.0% | |
| ! | GCCTGTCTTTTTGCACTTAC+TGG | + | chr8.1:4438877-4438896 | MS.gene88667:CDS | 45.0% |
| !! | AGAAGCATTCCAGTGGATGA+AGG | + | chr8.1:4438903-4438922 | MS.gene88667:CDS | 45.0% |
| !! | ATATAATTATATACAATTAT+AGG | + | chr8.1:4438400-4438419 | MS.gene88667:intron | 5.0% |
| ATGTGACATCTGCAGCTGCT+GGG | + | chr8.1:4438224-4438243 | MS.gene88667:CDS | 50.0% | |
| TATGTGACATCTGCAGCTGC+TGG | + | chr8.1:4438223-4438242 | MS.gene88667:CDS | 50.0% | |
| TTGAATGACAGGGACCCAGT+AGG | + | chr8.1:4438578-4438597 | MS.gene88667:intron | 50.0% | |
| !! | CTGGATCAGAAGCATTCCAG+TGG | + | chr8.1:4438896-4438915 | MS.gene88667:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 4437960 | 4439039 | 4437960 | ID=MS.gene88667 |
| chr8.1 | mRNA | 4437960 | 4439039 | 4437960 | ID=MS.gene88667.t1;Parent=MS.gene88667 |
| chr8.1 | exon | 4437960 | 4438117 | 4437960 | ID=MS.gene88667.t1.exon1;Parent=MS.gene88667.t1 |
| chr8.1 | CDS | 4437960 | 4438117 | 4437960 | ID=cds.MS.gene88667.t1;Parent=MS.gene88667.t1 |
| chr8.1 | exon | 4438213 | 4438357 | 4438213 | ID=MS.gene88667.t1.exon2;Parent=MS.gene88667.t1 |
| chr8.1 | CDS | 4438213 | 4438357 | 4438213 | ID=cds.MS.gene88667.t1;Parent=MS.gene88667.t1 |
| chr8.1 | exon | 4438832 | 4438924 | 4438832 | ID=MS.gene88667.t1.exon3;Parent=MS.gene88667.t1 |
| chr8.1 | CDS | 4438832 | 4438924 | 4438832 | ID=cds.MS.gene88667.t1;Parent=MS.gene88667.t1 |
| chr8.1 | exon | 4439025 | 4439039 | 4439025 | ID=MS.gene88667.t1.exon4;Parent=MS.gene88667.t1 |
| chr8.1 | CDS | 4439025 | 4439039 | 4439025 | ID=cds.MS.gene88667.t1;Parent=MS.gene88667.t1 |
| Gene Sequence |
| Protein sequence |
