Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96287.t1 | XP_003610523.2 | 93.3 | 796 | 11 | 1 | 1 | 754 | 86 | 881 | 0.00E+00 | 1471.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96287.t1 | Q9SU29 | 46.4 | 796 | 362 | 10 | 1 | 754 | 101 | 873 | 1.2e-188 | 661.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96287.t1 | G7JKJ3 | 93.3 | 796 | 11 | 1 | 1 | 754 | 86 | 881 | 0.0e+00 | 1471.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene96287 | 0.841403 | 4.85E-58 | -1.69E-46 |
| MS.gene049254 | MS.gene96287 | 0.823107 | 1.66E-53 | -1.69E-46 |
| MS.gene049404 | MS.gene96287 | 0.824667 | 7.13E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene96287 | 0.814614 | 1.41E-51 | -1.69E-46 |
| MS.gene049435 | MS.gene96287 | 0.801428 | 9.05E-49 | -1.69E-46 |
| MS.gene049452 | MS.gene96287 | 0.842162 | 3.06E-58 | -1.69E-46 |
| MS.gene049983 | MS.gene96287 | 0.864065 | 1.59E-64 | -1.69E-46 |
| MS.gene050237 | MS.gene96287 | 0.808159 | 3.55E-50 | -1.69E-46 |
| MS.gene050273 | MS.gene96287 | 0.825395 | 4.80E-54 | -1.69E-46 |
| MS.gene050384 | MS.gene96287 | 0.803236 | 3.84E-49 | -1.69E-46 |
| MS.gene050414 | MS.gene96287 | 0.817082 | 3.97E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene96287 | 0.808837 | 2.55E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene96287 | 0.853209 | 2.78E-61 | -1.69E-46 |
| MS.gene050561 | MS.gene96287 | 0.849424 | 3.26E-60 | -1.69E-46 |
| MS.gene050562 | MS.gene96287 | 0.835291 | 1.83E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene96287 | 0.819473 | 1.14E-52 | -1.69E-46 |
| MS.gene050689 | MS.gene96287 | 0.808816 | 2.57E-50 | -1.69E-46 |
| MS.gene050737 | MS.gene96287 | 0.806916 | 6.52E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene96287 | 0.86541 | 6.03E-65 | -1.69E-46 |
| MS.gene050826 | MS.gene96287 | 0.804777 | 1.84E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene96287 | 0.827765 | 1.31E-54 | -1.69E-46 |
| MS.gene050962 | MS.gene96287 | 0.854934 | 8.84E-62 | -1.69E-46 |
| MS.gene051198 | MS.gene96287 | 0.841836 | 3.73E-58 | -1.69E-46 |
| MS.gene051279 | MS.gene96287 | 0.833003 | 6.84E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene96287 | 0.8135 | 2.48E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene96287 | 0.828576 | 8.33E-55 | -1.69E-46 |
| MS.gene051856 | MS.gene96287 | 0.801723 | 7.87E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene96287 | -0.803318 | 3.69E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene96287 | 0.804039 | 2.62E-49 | -1.69E-46 |
| MS.gene052426 | MS.gene96287 | 0.80933 | 2.00E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene96287 | 0.83779 | 4.22E-57 | -1.69E-46 |
| MS.gene052519 | MS.gene96287 | 0.82301 | 1.74E-53 | -1.69E-46 |
| MS.gene052674 | MS.gene96287 | 0.840921 | 6.50E-58 | -1.69E-46 |
| MS.gene052675 | MS.gene96287 | 0.842434 | 2.59E-58 | -1.69E-46 |
| MS.gene052677 | MS.gene96287 | 0.847243 | 1.31E-59 | -1.69E-46 |
| MS.gene052863 | MS.gene96287 | 0.814265 | 1.68E-51 | -1.69E-46 |
| MS.gene052954 | MS.gene96287 | 0.8028 | 4.72E-49 | -1.69E-46 |
| MS.gene053006 | MS.gene96287 | 0.822378 | 2.45E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene96287 | 0.817157 | 3.81E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene96287 | 0.841587 | 4.34E-58 | -1.69E-46 |
| MS.gene053166 | MS.gene96287 | 0.810008 | 1.43E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene96287 | 0.805793 | 1.12E-49 | -1.69E-46 |
| MS.gene05350 | MS.gene96287 | 0.815257 | 1.01E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene96287 | 0.829752 | 4.32E-55 | -1.69E-46 |
| MS.gene05364 | MS.gene96287 | 0.81559 | 8.55E-52 | -1.69E-46 |
| MS.gene053931 | MS.gene96287 | 0.85953 | 3.88E-63 | -1.69E-46 |
| MS.gene053998 | MS.gene96287 | 0.803059 | 4.18E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene96287 | 0.823396 | 1.42E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene96287 | 0.852359 | 4.86E-61 | -1.69E-46 |
| MS.gene054657 | MS.gene96287 | 0.809904 | 1.50E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene96287 | 0.818691 | 1.72E-52 | -1.69E-46 |
| MS.gene05510 | MS.gene96287 | 0.801832 | 7.47E-49 | -1.69E-46 |
| MS.gene055222 | MS.gene96287 | 0.818161 | 2.26E-52 | -1.69E-46 |
| MS.gene055227 | MS.gene96287 | 0.81101 | 8.67E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene96287 | 0.82089 | 5.40E-53 | -1.69E-46 |
| MS.gene055230 | MS.gene96287 | 0.815086 | 1.11E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene96287 | 0.803857 | 2.85E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene96287 | 0.810219 | 1.29E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene96287 | 0.833373 | 5.54E-56 | -1.69E-46 |
| MS.gene055841 | MS.gene96287 | 0.827958 | 1.17E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene96287 | 0.823381 | 1.43E-53 | -1.69E-46 |
| MS.gene056162 | MS.gene96287 | 0.81979 | 9.65E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene96287 | 0.844582 | 6.92E-59 | -1.69E-46 |
| MS.gene056252 | MS.gene96287 | 0.80173 | 7.84E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene96287 | 0.806049 | 9.94E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene96287 | 0.817614 | 3.01E-52 | -1.69E-46 |
| MS.gene056776 | MS.gene96287 | 0.821606 | 3.69E-53 | -1.69E-46 |
| MS.gene056779 | MS.gene96287 | 0.813314 | 2.72E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene96287 | 0.85598 | 4.38E-62 | -1.69E-46 |
| MS.gene056873 | MS.gene96287 | 0.816844 | 4.49E-52 | -1.69E-46 |
| MS.gene05690 | MS.gene96287 | 0.808198 | 3.48E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene96287 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene96287 | 0.852505 | 4.42E-61 | -1.69E-46 |
| MS.gene057444 | MS.gene96287 | 0.805601 | 1.23E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene96287 | 0.806176 | 9.34E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene96287 | 0.808904 | 2.46E-50 | -1.69E-46 |
| MS.gene057855 | MS.gene96287 | 0.822537 | 2.25E-53 | -1.69E-46 |
| MS.gene057869 | MS.gene96287 | 0.841404 | 4.85E-58 | -1.69E-46 |
| MS.gene057915 | MS.gene96287 | 0.800139 | 1.66E-48 | -1.69E-46 |
| MS.gene058008 | MS.gene96287 | 0.828802 | 7.34E-55 | -1.69E-46 |
| MS.gene058009 | MS.gene96287 | 0.856931 | 2.30E-62 | -1.69E-46 |
| MS.gene058010 | MS.gene96287 | 0.871687 | 5.65E-67 | -1.69E-46 |
| MS.gene058081 | MS.gene96287 | 0.800589 | 1.34E-48 | -1.69E-46 |
| MS.gene058292 | MS.gene96287 | 0.800838 | 1.19E-48 | -1.69E-46 |
| MS.gene058548 | MS.gene96287 | 0.810753 | 9.85E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene96287 | 0.809384 | 1.94E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene96287 | 0.825281 | 5.11E-54 | -1.69E-46 |
| MS.gene058781 | MS.gene96287 | 0.830203 | 3.35E-55 | -1.69E-46 |
| MS.gene058783 | MS.gene96287 | 0.858028 | 1.09E-62 | -1.69E-46 |
| MS.gene058979 | MS.gene96287 | 0.851029 | 1.16E-60 | -1.69E-46 |
| MS.gene059161 | MS.gene96287 | 0.808315 | 3.29E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene96287 | 0.826594 | 2.49E-54 | -1.69E-46 |
| MS.gene059842 | MS.gene96287 | 0.819458 | 1.15E-52 | -1.69E-46 |
| MS.gene060011 | MS.gene96287 | 0.838689 | 2.48E-57 | -1.69E-46 |
| MS.gene060167 | MS.gene96287 | 0.805405 | 1.36E-49 | -1.69E-46 |
| MS.gene060259 | MS.gene96287 | 0.805255 | 1.46E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene96287 | 0.813695 | 2.25E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene96287 | 0.848084 | 7.68E-60 | -1.69E-46 |
| MS.gene06052 | MS.gene96287 | 0.846499 | 2.09E-59 | -1.69E-46 |
| MS.gene060802 | MS.gene96287 | 0.802444 | 5.59E-49 | -1.69E-46 |
| MS.gene060840 | MS.gene96287 | 0.821228 | 4.51E-53 | -1.69E-46 |
| MS.gene060932 | MS.gene96287 | 0.81176 | 5.96E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene96287 | 0.80907 | 2.27E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene96287 | 0.853273 | 2.66E-61 | -1.69E-46 |
| MS.gene060937 | MS.gene96287 | 0.835255 | 1.87E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96287.t1 | MTR_4g133120 | 93.342 | 796 | 11 | 1 | 1 | 754 | 86 | 881 | 0.0 | 1527 |
| MS.gene96287.t1 | MTR_2g025830 | 50.124 | 804 | 322 | 13 | 1 | 753 | 44 | 819 | 0.0 | 711 |
| MS.gene96287.t1 | MTR_2g025790 | 48.443 | 803 | 336 | 11 | 1 | 753 | 51 | 825 | 0.0 | 673 |
| MS.gene96287.t1 | MTR_2g025810 | 48.561 | 799 | 335 | 11 | 1 | 753 | 46 | 814 | 0.0 | 670 |
| MS.gene96287.t1 | MTR_2g025950 | 47.020 | 755 | 319 | 11 | 49 | 753 | 53 | 776 | 0.0 | 617 |
| MS.gene96287.t1 | MTR_5g066710 | 35.015 | 337 | 184 | 11 | 438 | 752 | 3332 | 3655 | 2.23e-45 | 177 |
| MS.gene96287.t1 | MTR_3g099777 | 33.828 | 337 | 188 | 10 | 438 | 752 | 3360 | 3683 | 5.67e-44 | 172 |
| MS.gene96287.t1 | MTR_4g094705 | 33.234 | 337 | 190 | 10 | 438 | 752 | 3414 | 3737 | 5.50e-42 | 166 |
| MS.gene96287.t1 | MTR_4g094708 | 32.938 | 337 | 191 | 10 | 438 | 752 | 3435 | 3758 | 4.83e-41 | 163 |
| MS.gene96287.t1 | MTR_2g033040 | 29.595 | 321 | 202 | 7 | 433 | 739 | 701 | 1011 | 6.65e-33 | 137 |
| MS.gene96287.t1 | MTR_7g103210 | 28.014 | 282 | 183 | 4 | 479 | 748 | 871 | 1144 | 7.29e-28 | 121 |
| MS.gene96287.t1 | MTR_7g103210 | 29.258 | 229 | 153 | 3 | 479 | 706 | 871 | 1091 | 6.19e-23 | 105 |
| MS.gene96287.t1 | MTR_1g066940 | 27.645 | 293 | 177 | 6 | 482 | 749 | 1263 | 1545 | 2.14e-19 | 94.4 |
| MS.gene96287.t1 | MTR_1g066940 | 27.636 | 275 | 164 | 6 | 482 | 731 | 1263 | 1527 | 3.66e-18 | 90.1 |
| MS.gene96287.t1 | MTR_4g073370 | 25.497 | 302 | 189 | 6 | 479 | 749 | 1581 | 1877 | 4.65e-16 | 83.6 |
| MS.gene96287.t1 | MTR_1g066940 | 26.316 | 247 | 150 | 5 | 482 | 706 | 1263 | 1499 | 6.52e-14 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96287.t1 | AT4G12570 | 46.106 | 796 | 364 | 9 | 1 | 754 | 101 | 873 | 0.0 | 682 |
| MS.gene96287.t1 | AT1G55860 | 33.131 | 329 | 186 | 9 | 438 | 745 | 3358 | 3673 | 2.28e-40 | 161 |
| MS.gene96287.t1 | AT1G70320 | 33.131 | 329 | 186 | 9 | 438 | 745 | 3335 | 3650 | 4.72e-40 | 160 |
| MS.gene96287.t1 | AT3G17205 | 29.375 | 320 | 204 | 6 | 433 | 739 | 706 | 1016 | 1.70e-31 | 132 |
| MS.gene96287.t1 | AT3G17205 | 29.375 | 320 | 204 | 6 | 433 | 739 | 706 | 1016 | 1.70e-31 | 132 |
| MS.gene96287.t1 | AT3G17205 | 29.375 | 320 | 204 | 6 | 433 | 739 | 692 | 1002 | 1.89e-31 | 132 |
| MS.gene96287.t1 | AT3G53090 | 27.106 | 273 | 179 | 4 | 479 | 739 | 865 | 1129 | 9.02e-26 | 114 |
| MS.gene96287.t1 | AT3G53090 | 27.106 | 273 | 179 | 4 | 479 | 739 | 865 | 1129 | 9.02e-26 | 114 |
| MS.gene96287.t1 | AT5G02880 | 27.211 | 294 | 183 | 8 | 479 | 749 | 1213 | 1498 | 1.87e-16 | 84.7 |
| MS.gene96287.t1 | AT5G02880 | 27.174 | 276 | 170 | 8 | 479 | 731 | 1213 | 1480 | 3.00e-15 | 80.9 |
| MS.gene96287.t1 | AT4G38600 | 24.422 | 303 | 187 | 8 | 479 | 749 | 1498 | 1790 | 1.81e-12 | 72.0 |
Find 141 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTACTACTTATATTAATT+TGG | 0.175687 | 8.4:+1320661 | MS.gene96287:CDS |
| CTTGTATGTTTCACCTTATA+CGG | 0.191170 | 8.4:+1320775 | MS.gene96287:CDS |
| ACTGCGTGCTGGACTGTTTA+TGG | 0.197538 | 8.4:+1321717 | MS.gene96287:CDS |
| TTGAAGGCAAGTATCAATTT+TGG | 0.207942 | 8.4:-1321308 | None:intergenic |
| ATTGATTTCACTGTTTCTTC+TGG | 0.253137 | 8.4:-1320383 | None:intergenic |
| ATATTCAGATATCTTGGTTT+TGG | 0.258128 | 8.4:+1323148 | MS.gene96287:CDS |
| TTTATGTCTTCTAAAGTAAT+AGG | 0.263529 | 8.4:-1322715 | None:intergenic |
| TGATAGTTTGTTGAGGAATT+TGG | 0.265690 | 8.4:+1321075 | MS.gene96287:CDS |
| CAAAGGGTTGGTGTTGGTTC+AGG | 0.273096 | 8.4:+1321024 | MS.gene96287:CDS |
| GCAGAATCAGCATCAAGTTT+AGG | 0.275846 | 8.4:-1320698 | None:intergenic |
| TTCACCTTATACGGGGAATA+AGG | 0.276380 | 8.4:+1320784 | MS.gene96287:CDS |
| ATTAGAGAAGTGGAGGAATT+AGG | 0.288826 | 8.4:+1322829 | MS.gene96287:CDS |
| GAACATATTGGCTCTAGTTT+TGG | 0.291901 | 8.4:+1325112 | MS.gene96287:CDS |
| TTGGCAAGTTGTTAATGATA+TGG | 0.321662 | 8.4:+1320571 | MS.gene96287:CDS |
| AGTTGAAGGCTTTCGTGGTT+TGG | 0.323282 | 8.4:+1324952 | MS.gene96287:CDS |
| AACTAGAGCCAATATGTTCT+TGG | 0.327789 | 8.4:-1325108 | None:intergenic |
| GTATGTTGATCTTCTTATAA+AGG | 0.330723 | 8.4:+1322921 | MS.gene96287:CDS |
| GTTGAAGGCTTTCGTGGTTT+GGG | 0.333475 | 8.4:+1324953 | MS.gene96287:CDS |
| TACTTATATTAATTTGGCTT+TGG | 0.333864 | 8.4:+1320667 | MS.gene96287:CDS |
| TCAGCATCAAGTTTAGGTTT+AGG | 0.350632 | 8.4:-1320692 | None:intergenic |
| GTGAAATATTTACCAGTTGA+AGG | 0.351097 | 8.4:+1324938 | MS.gene96287:CDS |
| TAGAAGCTGCAAGCAAATAT+TGG | 0.351289 | 8.4:+1322759 | MS.gene96287:CDS |
| ATGCCTCCTAGCTTCGAAAT+TGG | 0.357538 | 8.4:-1321572 | None:intergenic |
| TTCATTGATTCAGATGCATT+AGG | 0.373706 | 8.4:+1322796 | MS.gene96287:CDS |
| CAAGCCTTATTCCCCGTATA+AGG | 0.374779 | 8.4:-1320788 | None:intergenic |
| ACACAGATATTCAGATATCT+TGG | 0.377507 | 8.4:+1323142 | MS.gene96287:CDS |
| AGTCCTCACAGGGACTAAAA+AGG | 0.379202 | 8.4:-1321161 | None:intergenic |
| TCTTGTTCTTGTCCTGCTGC+TGG | 0.383862 | 8.4:-1321228 | None:intergenic |
| TGCATTAGCTTTGATGCATA+AGG | 0.385492 | 8.4:+1322639 | MS.gene96287:CDS |
| ATGCCATTTCCGTCGAAGAT+TGG | 0.390215 | 8.4:+1323088 | MS.gene96287:CDS |
| TTAATAGATTTAACAGCGTC+AGG | 0.391859 | 8.4:-1320632 | None:intergenic |
| TGTAAATTGCTTAGTAGAGT+TGG | 0.394201 | 8.4:+1320905 | MS.gene96287:CDS |
| CAGTCCAGCACGCAGTGATT+CGG | 0.396009 | 8.4:-1321710 | None:intergenic |
| TTTAGCCATGATGATATTCC+CGG | 0.399239 | 8.4:+1321594 | MS.gene96287:CDS |
| GTAAATTGCTTAGTAGAGTT+GGG | 0.400275 | 8.4:+1320906 | MS.gene96287:CDS |
| TTTGCTTGCAGCTTCTATAT+AGG | 0.404474 | 8.4:-1322753 | None:intergenic |
| TTTCCAATCTTCGACGGAAA+TGG | 0.407461 | 8.4:-1323091 | None:intergenic |
| TTGTAGTTAATAGTAAGAAC+AGG | 0.411643 | 8.4:+1322893 | MS.gene96287:CDS |
| TCGTAGTCTTCTTTCACCTC+CGG | 0.415102 | 8.4:-1321613 | None:intergenic |
| TAGAGTCTGAAGATCTTGAT+TGG | 0.418715 | 8.4:+1323046 | MS.gene96287:CDS |
| TTCATTCGAATGATGTCAAA+AGG | 0.419159 | 8.4:+1320335 | None:intergenic |
| GACGCTAATCTTCACCTTGT+TGG | 0.419467 | 8.4:+1320518 | MS.gene96287:CDS |
| ATTTACAAGTCCCATGAATC+TGG | 0.421290 | 8.4:+1324989 | MS.gene96287:CDS |
| GACTGGAATCGAGCAGCAAC+AGG | 0.428376 | 8.4:+1321180 | MS.gene96287:CDS |
| AGTCCAGCACGCAGTGATTC+GGG | 0.431196 | 8.4:-1321709 | None:intergenic |
| TGTAACATCCATAGCTGAGC+AGG | 0.432078 | 8.4:+1322951 | MS.gene96287:CDS |
| GTCATTACCCAAGAACATAT+TGG | 0.433530 | 8.4:+1325100 | MS.gene96287:CDS |
| TATTACTTTAGAAGACATAA+AGG | 0.438867 | 8.4:+1322717 | MS.gene96287:CDS |
| GAAGACGATCACCAGATTCA+TGG | 0.439105 | 8.4:-1325000 | None:intergenic |
| GCAGGCTGCGCGTGTGGCGT+TGG | 0.439975 | 8.4:+1320877 | MS.gene96287:CDS |
| CAAGGTAACAAGAACGGAAA+TGG | 0.443734 | 8.4:-1320756 | None:intergenic |
| AACTTTGAAAGAAGAACTGC+TGG | 0.445274 | 8.4:-1323023 | None:intergenic |
| AAGATTTCTAAGCTTTATGA+TGG | 0.447881 | 8.4:+1321430 | MS.gene96287:CDS |
| AAGAATCTCAGCAAAACCTT+TGG | 0.455740 | 8.4:-1322986 | None:intergenic |
| ACTAGAGCCAATATGTTCTT+GGG | 0.457550 | 8.4:-1325107 | None:intergenic |
| CGTAGTCTTCTTTCACCTCC+GGG | 0.458862 | 8.4:-1321612 | None:intergenic |
| TGCTCGATTCCAGTCCTCAC+AGG | 0.460556 | 8.4:-1321172 | None:intergenic |
| AAAGCACACACTGAGTATAA+TGG | 0.464625 | 8.4:+1323111 | MS.gene96287:CDS |
| TTGCAGCTTCTATATAGGTC+AGG | 0.476529 | 8.4:-1322748 | None:intergenic |
| GAGGAATTTGGATTTGAGCT+TGG | 0.478934 | 8.4:+1321087 | MS.gene96287:CDS |
| GAGATTCACTGACAAGGAAA+TGG | 0.479101 | 8.4:+1321342 | MS.gene96287:CDS |
| TTAAGACGAGCTTGCATGAC+AGG | 0.479167 | 8.4:-1325076 | None:intergenic |
| TTGTATGTTTCACCTTATAC+GGG | 0.484986 | 8.4:+1320776 | MS.gene96287:CDS |
| AAACCACGAAAGCCTTCAAC+TGG | 0.486764 | 8.4:-1324950 | None:intergenic |
| TTACCAGTTGAAGGCTTTCG+TGG | 0.496517 | 8.4:+1324947 | MS.gene96287:CDS |
| TAAAAGCATGTATGAGATGA+AGG | 0.496856 | 8.4:-1325022 | None:intergenic |
| ATTGTTTATGATCTTTGTCA+TGG | 0.500871 | 8.4:+1320599 | MS.gene96287:CDS |
| GATCCCGAATCACTGCGTGC+TGG | 0.506030 | 8.4:+1321706 | MS.gene96287:CDS |
| CAGCAGGACAAGAACAAGAA+TGG | 0.516630 | 8.4:+1321232 | MS.gene96287:CDS |
| TGACAAGGAAATGGTGTTTG+AGG | 0.517234 | 8.4:+1321351 | MS.gene96287:CDS |
| AATGACAGCTGAAGAAAAGA+AGG | 0.520042 | 8.4:+1324892 | MS.gene96287:CDS |
| AAGTGGAGGAATTAGGACAG+AGG | 0.520577 | 8.4:+1322836 | MS.gene96287:CDS |
| ATGTCACCAATTTCGAAGCT+AGG | 0.522617 | 8.4:+1321566 | MS.gene96287:CDS |
| AAAGCGATCCAGCTGTGTCC+TGG | 0.529729 | 8.4:+1322859 | MS.gene96287:CDS |
| CAGGTTTCACACTTTGCCAA+AGG | 0.533753 | 8.4:+1322970 | MS.gene96287:CDS |
| CAATGGTAAACAGCTTCAGT+GGG | 0.535417 | 8.4:+1320463 | MS.gene96287:CDS |
| TCAGCAAGTTCACGAACAAA+CGG | 0.535503 | 8.4:-1321055 | None:intergenic |
| CTGCAAGCAAATATTGGAGA+TGG | 0.535685 | 8.4:+1322765 | MS.gene96287:CDS |
| GTGTGAAACCTGCTCAGCTA+TGG | 0.536035 | 8.4:-1322959 | None:intergenic |
| TGCATGAGATGCTCATTGAC+AGG | 0.536076 | 8.4:+1321641 | MS.gene96287:CDS |
| TCCTTTGTTGAACAATGTTG+AGG | 0.537083 | 8.4:+1321129 | MS.gene96287:CDS |
| CTTGAGTACTTCAGCTTCTG+TGG | 0.540272 | 8.4:+1322607 | MS.gene96287:CDS |
| TCAATGGTAAACAGCTTCAG+TGG | 0.541769 | 8.4:+1320462 | MS.gene96287:CDS |
| ACAGGCATAGATGAATAAGC+TGG | 0.547667 | 8.4:-1325058 | None:intergenic |
| GTCCAAGACGTTTCATACGC+AGG | 0.552066 | 8.4:+1320859 | MS.gene96287:CDS |
| CGTATAAGGTGAAACATACA+AGG | 0.552501 | 8.4:-1320774 | None:intergenic |
| TGTTCTTGTCCTGCTGCTGG+TGG | 0.552538 | 8.4:-1321225 | None:intergenic |
| GAACGAATTGAAGAAATGAA+AGG | 0.552557 | 8.4:+1320410 | MS.gene96287:CDS |
| ATCTTGATTGGATGCTGCGT+GGG | 0.555503 | 8.4:+1323058 | MS.gene96287:CDS |
| CACCTCCGGGAATATCATCA+TGG | 0.556440 | 8.4:-1321599 | None:intergenic |
| TTAACAACTTGCCAAGCTTG+AGG | 0.558690 | 8.4:-1320563 | None:intergenic |
| TCATACGCAGGCTGCGCGTG+TGG | 0.560611 | 8.4:+1320871 | MS.gene96287:CDS |
| TGTTCAACAAAGGATTAGCA+AGG | 0.561790 | 8.4:-1321120 | None:intergenic |
| AATTTCACTTGCGGCATCTG+AGG | 0.561824 | 8.4:+1320991 | MS.gene96287:CDS |
| AGCCTGCGTATGAAACGTCT+TGG | 0.563672 | 8.4:-1320861 | None:intergenic |
| AGCTGCTGAAATTTCACTTG+CGG | 0.565049 | 8.4:+1320982 | MS.gene96287:CDS |
| GTACAGAACATCCTCAAGCT+TGG | 0.565129 | 8.4:+1320552 | MS.gene96287:CDS |
| TCCTCAACATTGTTCAACAA+AGG | 0.565254 | 8.4:-1321130 | None:intergenic |
| GGGACTTGTAAATGTGGAGA+CGG | 0.565502 | 8.4:-1324979 | None:intergenic |
| TGTTGCTTACCACCAGCAGC+AGG | 0.565851 | 8.4:+1321216 | MS.gene96287:CDS |
| AACAAAGGATTAGCAAGGGA+AGG | 0.567911 | 8.4:-1321115 | None:intergenic |
| ACAAAGGATTAGCAAGGGAA+GGG | 0.568402 | 8.4:-1321114 | None:intergenic |
| GAATCACAAAGGGTTGGTGT+TGG | 0.569578 | 8.4:+1321018 | MS.gene96287:CDS |
| GACGTTTATTAGAGAAGTGG+AGG | 0.576387 | 8.4:+1322822 | MS.gene96287:CDS |
| CTGAGGATGAGAATCACAAA+GGG | 0.580618 | 8.4:+1321008 | MS.gene96287:CDS |
| AAGACGATCACCAGATTCAT+GGG | 0.582622 | 8.4:-1324999 | None:intergenic |
| TTGATGCATAAGGTGCAAGT+TGG | 0.584006 | 8.4:+1322649 | MS.gene96287:CDS |
| ACTGACGTTTATTAGAGAAG+TGG | 0.586551 | 8.4:+1322819 | MS.gene96287:CDS |
| CATCGTTAAATATGCAAAGA+GGG | 0.587269 | 8.4:+1321510 | MS.gene96287:CDS |
| GTGTGCTTTCCAATCTTCGA+CGG | 0.588467 | 8.4:-1323097 | None:intergenic |
| CAAAGGATTAGCAAGGGAAG+GGG | 0.590290 | 8.4:-1321113 | None:intergenic |
| GCTCGATTCCAGTCCTCACA+GGG | 0.595969 | 8.4:-1321171 | None:intergenic |
| TCTTGTACTCAAGAATCCAC+TGG | 0.597314 | 8.4:-1321543 | None:intergenic |
| CAGGCATAGATGAATAAGCT+GGG | 0.601849 | 8.4:-1325057 | None:intergenic |
| GAACAAACACTCGCGGAGTG+TGG | 0.604696 | 8.4:+1320485 | MS.gene96287:CDS |
| GGATGAGAATCACAAAGGGT+TGG | 0.611943 | 8.4:+1321012 | MS.gene96287:CDS |
| TCATCGTTAAATATGCAAAG+AGG | 0.615436 | 8.4:+1321509 | MS.gene96287:CDS |
| GGACTTGTAAATGTGGAGAC+GGG | 0.615613 | 8.4:-1324978 | None:intergenic |
| GTTCAACAAAGGATTAGCAA+GGG | 0.616019 | 8.4:-1321119 | None:intergenic |
| AACATACAAGGTAACAAGAA+CGG | 0.618396 | 8.4:-1320762 | None:intergenic |
| ATTCATGGGACTTGTAAATG+TGG | 0.624672 | 8.4:-1324985 | None:intergenic |
| ATGAAACGTCTTGGACAATG+AGG | 0.626594 | 8.4:-1320852 | None:intergenic |
| GCGATCCAGCTGTGTCCTGG+TGG | 0.633678 | 8.4:+1322862 | MS.gene96287:CDS |
| AACTTGCTGATAGTTTGTTG+AGG | 0.634625 | 8.4:+1321068 | MS.gene96287:CDS |
| AAGAATCCACTGGTGTTCGT+CGG | 0.639588 | 8.4:-1321533 | None:intergenic |
| AGAGGGCCGACGAACACCAG+TGG | 0.642356 | 8.4:+1321527 | MS.gene96287:CDS |
| TCACCAATTTCGAAGCTAGG+AGG | 0.648868 | 8.4:+1321569 | MS.gene96287:CDS |
| GGTAACAAGAACGGAAATGG+CGG | 0.652521 | 8.4:-1320753 | None:intergenic |
| TCTGAGGATGAGAATCACAA+AGG | 0.662376 | 8.4:+1321007 | MS.gene96287:CDS |
| GGACAAGAGATTCACTGACA+AGG | 0.665008 | 8.4:+1321336 | MS.gene96287:CDS |
| GATCTTGATTGGATGCTGCG+TGG | 0.672731 | 8.4:+1323057 | MS.gene96287:CDS |
| TGTATGTTTCACCTTATACG+GGG | 0.672887 | 8.4:+1320777 | MS.gene96287:CDS |
| GAAAGATAGAGAGAGCACGC+AGG | 0.676105 | 8.4:-1321388 | None:intergenic |
| GGTGGTAAGCAACACAACCA+CGG | 0.692350 | 8.4:-1321207 | None:intergenic |
| ACTGATTGTACAACAGACGA+AGG | 0.701150 | 8.4:-1321279 | None:intergenic |
| TACTACGCATTCGACCAACA+AGG | 0.708760 | 8.4:-1320532 | None:intergenic |
| AGCCATGATGATATTCCCGG+AGG | 0.709855 | 8.4:+1321597 | MS.gene96287:CDS |
| TGTAGTTAATAGTAAGAACA+GGG | 0.714402 | 8.4:+1322894 | MS.gene96287:CDS |
| GAGCAGCAACAGGCTCTCCG+TGG | 0.719942 | 8.4:+1321190 | MS.gene96287:CDS |
| TCAGTGGGAACAAACACTCG+CGG | 0.732147 | 8.4:+1320478 | MS.gene96287:CDS |
| GGAGGTGAAAGAAGACTACG+AGG | 0.770938 | 8.4:+1321615 | MS.gene96287:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAGAGATAATAAAAAAAA+AGG | - | chr8.4:1323966-1323985 | None:intergenic | 15.0% |
| !! | GTTAATTTATTTGTAAGAAA+GGG | - | chr8.4:1323502-1323521 | None:intergenic | 15.0% |
| !! | TTAATTTATTTGTAAGAAAG+GGG | - | chr8.4:1323501-1323520 | None:intergenic | 15.0% |
| !! | AATTATATTCAGTCATTGAA+GGG | - | chr8.4:1324003-1324022 | None:intergenic | 20.0% |
| !! | AGATAATAAAAAAAAAGGAG+TGG | - | chr8.4:1323961-1323980 | None:intergenic | 20.0% |
| !! | GATAAATTAAATATAGCTTG+AGG | - | chr8.4:1324711-1324730 | None:intergenic | 20.0% |
| !! | GATAATAAAAAAAAAGGAGT+GGG | - | chr8.4:1323960-1323979 | None:intergenic | 20.0% |
| !! | GCTTACTACTTATATTAATT+TGG | + | chr8.4:1320661-1320680 | MS.gene96287:CDS | 20.0% |
| !! | GGTTAATTTATTTGTAAGAA+AGG | - | chr8.4:1323503-1323522 | None:intergenic | 20.0% |
| !! | TAATTATATTCAGTCATTGA+AGG | - | chr8.4:1324004-1324023 | None:intergenic | 20.0% |
| !! | TAATTTATTTGTAAGAAAGG+GGG | - | chr8.4:1323500-1323519 | None:intergenic | 20.0% |
| !! | TCAATGACTGAATATAATTA+TGG | + | chr8.4:1324004-1324023 | MS.gene96287:intron | 20.0% |
| !!! | AAGCTATATTTAATTTATCC+AGG | + | chr8.4:1324712-1324731 | MS.gene96287:intron | 20.0% |
| !!! | AATTTCAGTCGATATTTTAT+GGG | - | chr8.4:1324140-1324159 | None:intergenic | 20.0% |
| !!! | ACGTAATGTGAATTTTAAAT+AGG | - | chr8.4:1322252-1322271 | None:intergenic | 20.0% |
| !!! | TACTTATATTAATTTGGCTT+TGG | + | chr8.4:1320667-1320686 | MS.gene96287:CDS | 20.0% |
| !!! | TATTACTTTAGAAGACATAA+AGG | + | chr8.4:1322717-1322736 | MS.gene96287:CDS | 20.0% |
| !!! | TATTTTACCACAACTATATA+GGG | + | chr8.4:1323333-1323352 | MS.gene96287:intron | 20.0% |
| !!! | TGTATTAAGCATTTTTTGAA+TGG | + | chr8.4:1320821-1320840 | MS.gene96287:CDS | 20.0% |
| !!! | TTTATGTCTTCTAAAGTAAT+AGG | - | chr8.4:1322718-1322737 | None:intergenic | 20.0% |
| ! | AACAAGAGTTGTTAATAAGA+GGG | - | chr8.4:1323453-1323472 | None:intergenic | 25.0% |
| ! | AATCAAGAAAATTTCAACAC+AGG | - | chr8.4:1322362-1322381 | None:intergenic | 25.0% |
| ! | ATGACTGAATATAATTATGG+TGG | + | chr8.4:1324007-1324026 | MS.gene96287:intron | 25.0% |
| ! | ATTATATTCAGTCATTGAAG+GGG | - | chr8.4:1324002-1324021 | None:intergenic | 25.0% |
| ! | ATTGTTTATGATCTTTGTCA+TGG | + | chr8.4:1320599-1320618 | MS.gene96287:CDS | 25.0% |
| ! | GAAAAAAAGTAAGAAGAATG+AGG | - | chr8.4:1324310-1324329 | None:intergenic | 25.0% |
| ! | GTATGTTGATCTTCTTATAA+AGG | + | chr8.4:1322921-1322940 | MS.gene96287:CDS | 25.0% |
| ! | TGAATGTTGAGTAATAGATA+AGG | - | chr8.4:1322188-1322207 | None:intergenic | 25.0% |
| ! | TGACTGAATATAATTATGGT+GGG | + | chr8.4:1324008-1324027 | MS.gene96287:intron | 25.0% |
| ! | TGTAGTTAATAGTAAGAACA+GGG | + | chr8.4:1322894-1322913 | MS.gene96287:CDS | 25.0% |
| ! | TTATCACATGGAAATACAAT+AGG | + | chr8.4:1322217-1322236 | MS.gene96287:intron | 25.0% |
| ! | TTGTAGTTAATAGTAAGAAC+AGG | + | chr8.4:1322893-1322912 | MS.gene96287:CDS | 25.0% |
| ! | TTTCAGTTGCAAGTAAAATT+GGG | - | chr8.4:1323691-1323710 | None:intergenic | 25.0% |
| ! | TTTCTTGATTTCTTCTACAT+TGG | + | chr8.4:1322372-1322391 | MS.gene96287:intron | 25.0% |
| !! | AAGATTTCTAAGCTTTATGA+TGG | + | chr8.4:1321430-1321449 | MS.gene96287:CDS | 25.0% |
| !! | AATCTTTTGAATACATTGCA+CGG | + | chr8.4:1321680-1321699 | MS.gene96287:CDS | 25.0% |
| !! | ATATTCAGATATCTTGGTTT+TGG | + | chr8.4:1323148-1323167 | MS.gene96287:CDS | 25.0% |
| !! | GAATTTCAGTCGATATTTTA+TGG | - | chr8.4:1324141-1324160 | None:intergenic | 25.0% |
| !! | GTATTTTACCACAACTATAT+AGG | + | chr8.4:1323332-1323351 | MS.gene96287:intron | 25.0% |
| !! | TCTCTATCTTTCAATTTTGA+AGG | + | chr8.4:1321399-1321418 | MS.gene96287:CDS | 25.0% |
| !!! | AACTTTGAAATCATGTTTAG+TGG | - | chr8.4:1322302-1322321 | None:intergenic | 25.0% |
| !!! | AGTATAGAGGTTTTATATCA+TGG | - | chr8.4:1322025-1322044 | None:intergenic | 25.0% |
| !!! | TATTCAGATATCTTGGTTTT+GGG | + | chr8.4:1323149-1323168 | MS.gene96287:CDS | 25.0% |
| !!! | TTCAAAGTTGTTGTTTTTAG+TGG | + | chr8.4:1322313-1322332 | MS.gene96287:intron | 25.0% |
| AAACTTTCGTACAAGTATAG+AGG | - | chr8.4:1322038-1322057 | None:intergenic | 30.0% | |
| AACATACAAGGTAACAAGAA+CGG | - | chr8.4:1320765-1320784 | None:intergenic | 30.0% | |
| AACCCAGAAAAAATGATTCT+TGG | - | chr8.4:1323723-1323742 | None:intergenic | 30.0% | |
| AATCAACACCAAACCAAAAA+TGG | - | chr8.4:1324222-1324241 | None:intergenic | 30.0% | |
| ACACAGATATTCAGATATCT+TGG | + | chr8.4:1323142-1323161 | MS.gene96287:CDS | 30.0% | |
| ACAGTCTGTTTGAAAAAACT+TGG | + | chr8.4:1324855-1324874 | MS.gene96287:intron | 30.0% | |
| AGAAAAAAGACAAGTTACAC+TGG | - | chr8.4:1322444-1322463 | None:intergenic | 30.0% | |
| AGACAAAGGATAAGTTAAAC+TGG | - | chr8.4:1322549-1322568 | None:intergenic | 30.0% | |
| ATGGTATCAGAAATGAAGAA+GGG | - | chr8.4:1324545-1324564 | None:intergenic | 30.0% | |
| ATTGCAGAACAAAATATCTG+AGG | - | chr8.4:1324765-1324784 | None:intergenic | 30.0% | |
| ATTTGTGTACTTCCTTCTAA+AGG | + | chr8.4:1324415-1324434 | MS.gene96287:intron | 30.0% | |
| CATCGTTAAATATGCAAAGA+GGG | + | chr8.4:1321510-1321529 | MS.gene96287:CDS | 30.0% | |
| CTTGTATGTTTCACCTTATA+CGG | + | chr8.4:1320775-1320794 | MS.gene96287:CDS | 30.0% | |
| CTTTCAGTTGCAAGTAAAAT+TGG | - | chr8.4:1323692-1323711 | None:intergenic | 30.0% | |
| CTTTCAGTTTAAACACATGA+TGG | - | chr8.4:1324564-1324583 | None:intergenic | 30.0% | |
| GAAAAAAGACAAGTTACACT+GGG | - | chr8.4:1322443-1322462 | None:intergenic | 30.0% | |
| GAACAAGAGTTGTTAATAAG+AGG | - | chr8.4:1323454-1323473 | None:intergenic | 30.0% | |
| GAACGAATTGAAGAAATGAA+AGG | + | chr8.4:1320410-1320429 | MS.gene96287:CDS | 30.0% | |
| GACAAAGGATAAGTTAAACT+GGG | - | chr8.4:1322548-1322567 | None:intergenic | 30.0% | |
| GGAAATGTGGAAAGAAATAT+TGG | - | chr8.4:1322132-1322151 | None:intergenic | 30.0% | |
| GGTCATTGGAAGAAAAAAAA+CGG | - | chr8.4:1324178-1324197 | None:intergenic | 30.0% | |
| GTAAATTGCTTAGTAGAGTT+GGG | + | chr8.4:1320906-1320925 | MS.gene96287:CDS | 30.0% | |
| GTACGACAAAAAAGATACAA+AGG | - | chr8.4:1320941-1320960 | None:intergenic | 30.0% | |
| GTCATTGGAAGAAAAAAAAC+GGG | - | chr8.4:1324177-1324196 | None:intergenic | 30.0% | |
| GTGAAATATTTACCAGTTGA+AGG | + | chr8.4:1324938-1324957 | MS.gene96287:CDS | 30.0% | |
| TAAACAAATGCCAAGTCATT+TGG | - | chr8.4:1323659-1323678 | None:intergenic | 30.0% | |
| TATTAACAACTCTTGTTCAC+AGG | + | chr8.4:1323456-1323475 | MS.gene96287:intron | 30.0% | |
| TCATCGTTAAATATGCAAAG+AGG | + | chr8.4:1321509-1321528 | MS.gene96287:CDS | 30.0% | |
| TGAAGGGATTTAACAAATCA+GGG | + | chr8.4:1323617-1323636 | MS.gene96287:intron | 30.0% | |
| TGACTAGTGACAAGTATATA+GGG | + | chr8.4:1323255-1323274 | MS.gene96287:intron | 30.0% | |
| TGATACTTGCCTTCAAAAAA+TGG | + | chr8.4:1321315-1321334 | MS.gene96287:CDS | 30.0% | |
| TGTAAATTGCTTAGTAGAGT+TGG | + | chr8.4:1320905-1320924 | MS.gene96287:CDS | 30.0% | |
| TTAACAATTACGACTGAAAC+AGG | - | chr8.4:1322405-1322424 | None:intergenic | 30.0% | |
| TTAATAGATTTAACAGCGTC+AGG | - | chr8.4:1320635-1320654 | None:intergenic | 30.0% | |
| TTCTTCTCTAATCTATGGTT+GGG | - | chr8.4:1323819-1323838 | None:intergenic | 30.0% | |
| TTGGCAAGTTGTTAATGATA+TGG | + | chr8.4:1320571-1320590 | MS.gene96287:CDS | 30.0% | |
| TTGTATGTTTCACCTTATAC+GGG | + | chr8.4:1320776-1320795 | MS.gene96287:CDS | 30.0% | |
| TTTCTTCTCTAATCTATGGT+TGG | - | chr8.4:1323820-1323839 | None:intergenic | 30.0% | |
| TTTGTAAGGTTAATGAAGTG+AGG | - | chr8.4:1321803-1321822 | None:intergenic | 30.0% | |
| ! | AGAAGGTTCTTCTTTTCTTT+TGG | + | chr8.4:1324909-1324928 | MS.gene96287:CDS | 30.0% |
| ! | AGATTTTCCCTATATAGTTG+TGG | - | chr8.4:1323343-1323362 | None:intergenic | 30.0% |
| ! | ATCTTTTGAATACATTGCAC+GGG | + | chr8.4:1321681-1321700 | MS.gene96287:CDS | 30.0% |
| ! | ATTGATTTCACTGTTTCTTC+TGG | - | chr8.4:1320386-1320405 | None:intergenic | 30.0% |
| ! | CATCTCATACATGCTTTTAT+CGG | + | chr8.4:1325026-1325045 | MS.gene96287:CDS | 30.0% |
| ! | TAAAAGCATGTATGAGATGA+AGG | - | chr8.4:1325025-1325044 | None:intergenic | 30.0% |
| ! | TGGTGATACATCATTTTCAT+TGG | - | chr8.4:1323867-1323886 | None:intergenic | 30.0% |
| ! | TTGAAGGCAAGTATCAATTT+TGG | - | chr8.4:1321311-1321330 | None:intergenic | 30.0% |
| ! | TTTAGAAGGAAGTACACAAA+TGG | - | chr8.4:1324416-1324435 | None:intergenic | 30.0% |
| ! | TTTTCATTGGACAATGTGTA+AGG | - | chr8.4:1323854-1323873 | None:intergenic | 30.0% |
| !! | AGCTTTAAACAAGTAGACAA+AGG | - | chr8.4:1322563-1322582 | None:intergenic | 30.0% |
| !! | ATATACACCACTTTTCACTA+CGG | + | chr8.4:1323934-1323953 | MS.gene96287:intron | 30.0% |
| !! | ATCTGATTCAACCATTTTTG+AGG | + | chr8.4:1322095-1322114 | MS.gene96287:intron | 30.0% |
| !! | TCAATATCTTAGTCTTGTAG+AGG | - | chr8.4:1324486-1324505 | None:intergenic | 30.0% |
| !! | TGATAGTTTGTTGAGGAATT+TGG | + | chr8.4:1321075-1321094 | MS.gene96287:CDS | 30.0% |
| !! | TTCATTGATTCAGATGCATT+AGG | + | chr8.4:1322796-1322815 | MS.gene96287:CDS | 30.0% |
| !!! | ACAATGGTTTTTGCCATTTT+TGG | + | chr8.4:1324206-1324225 | MS.gene96287:intron | 30.0% |
| !!! | AGTTGTTGTTTTTAGTGGAT+AGG | + | chr8.4:1322318-1322337 | MS.gene96287:intron | 30.0% |
| !!! | ATCTCTTGTCCATTTTTTGA+AGG | - | chr8.4:1321327-1321346 | None:intergenic | 30.0% |
| !!! | CTCCAAGAATCATTTTTTCT+GGG | + | chr8.4:1323718-1323737 | MS.gene96287:intron | 30.0% |
| !!! | CTTTTTTGTCGTACTAGTTT+GGG | + | chr8.4:1320947-1320966 | MS.gene96287:CDS | 30.0% |
| !!! | GTTAGAGTCAGTTAGTTTTT+AGG | - | chr8.4:1323530-1323549 | None:intergenic | 30.0% |
| !!! | TACTAGTTTGGGGTTTTTTT+TGG | + | chr8.4:1320958-1320977 | MS.gene96287:CDS | 30.0% |
| !!! | TCTTTTTTGTCGTACTAGTT+TGG | + | chr8.4:1320946-1320965 | MS.gene96287:CDS | 30.0% |
| !!! | TTTTTTGTCGTACTAGTTTG+GGG | + | chr8.4:1320948-1320967 | MS.gene96287:CDS | 30.0% |
| AAAAAACTTGGCAGATAGTG+GGG | + | chr8.4:1324867-1324886 | MS.gene96287:intron | 35.0% | |
| AAAAAATGATTCTTGGAGGC+AGG | - | chr8.4:1323716-1323735 | None:intergenic | 35.0% | |
| AAAGCACACACTGAGTATAA+TGG | + | chr8.4:1323111-1323130 | MS.gene96287:CDS | 35.0% | |
| AACTAGAGCCAATATGTTCT+TGG | - | chr8.4:1325111-1325130 | None:intergenic | 35.0% | |
| AAGAATCTCAGCAAAACCTT+TGG | - | chr8.4:1322989-1323008 | None:intergenic | 35.0% | |
| AAGACAAGGTGAAACTTTAG+AGG | - | chr8.4:1323592-1323611 | None:intergenic | 35.0% | |
| AAGAGTTGTTAATAAGAGGG+AGG | - | chr8.4:1323450-1323469 | None:intergenic | 35.0% | |
| AATGACAGCTGAAGAAAAGA+AGG | + | chr8.4:1324892-1324911 | MS.gene96287:CDS | 35.0% | |
| ACTAGAGCCAATATGTTCTT+GGG | - | chr8.4:1325110-1325129 | None:intergenic | 35.0% | |
| ACTGACGTTTATTAGAGAAG+TGG | + | chr8.4:1322819-1322838 | MS.gene96287:CDS | 35.0% | |
| AGAGTTGTTAATAAGAGGGA+GGG | - | chr8.4:1323449-1323468 | None:intergenic | 35.0% | |
| AGCGATATAAGGTCATTTGA+AGG | - | chr8.4:1324513-1324532 | None:intergenic | 35.0% | |
| ATCAACCTCTGTTCAAAAAG+AGG | - | chr8.4:1320440-1320459 | None:intergenic | 35.0% | |
| ATCCCTTCACATTAAAGACA+AGG | - | chr8.4:1323606-1323625 | None:intergenic | 35.0% | |
| ATGAGTGAATTGAGACCTAA+GGG | - | chr8.4:1323412-1323431 | None:intergenic | 35.0% | |
| ATGCAGATTATGTTGTACCT+TGG | - | chr8.4:1322587-1322606 | None:intergenic | 35.0% | |
| ATTAGAGAAGTGGAGGAATT+AGG | + | chr8.4:1322829-1322848 | MS.gene96287:CDS | 35.0% | |
| ATTCATGGGACTTGTAAATG+TGG | - | chr8.4:1324988-1325007 | None:intergenic | 35.0% | |
| ATTCTTCAAGAAGCAACAGA+AGG | - | chr8.4:1322153-1322172 | None:intergenic | 35.0% | |
| ATTTACAAGTCCCATGAATC+TGG | + | chr8.4:1324989-1325008 | MS.gene96287:CDS | 35.0% | |
| CAATTTGATGAAATCCTTGG+AGG | + | chr8.4:1321939-1321958 | MS.gene96287:intron | 35.0% | |
| CACCTTGTCTTTAATGTGAA+GGG | + | chr8.4:1323601-1323620 | MS.gene96287:intron | 35.0% | |
| CCAGAAAAAATGATTCTTGG+AGG | - | chr8.4:1323720-1323739 | None:intergenic | 35.0% | |
| CGTATAAGGTGAAACATACA+AGG | - | chr8.4:1320777-1320796 | None:intergenic | 35.0% | |
| CTCCAAGGATTTCATCAAAT+TGG | - | chr8.4:1321941-1321960 | None:intergenic | 35.0% | |
| CTCCAATTTGATGAAATCCT+TGG | + | chr8.4:1321936-1321955 | MS.gene96287:intron | 35.0% | |
| CTTCTTGAAGAATGATGCAT+TGG | + | chr8.4:1322160-1322179 | MS.gene96287:intron | 35.0% | |
| CTTTGTCTCATCCTAAACTT+TGG | + | chr8.4:1324253-1324272 | MS.gene96287:intron | 35.0% | |
| GAAAAAACTTGGCAGATAGT+GGG | + | chr8.4:1324866-1324885 | MS.gene96287:intron | 35.0% | |
| GATGGTATCAGAAATGAAGA+AGG | - | chr8.4:1324546-1324565 | None:intergenic | 35.0% | |
| GATTTAACAAATCAGGGACA+GGG | + | chr8.4:1323623-1323642 | MS.gene96287:intron | 35.0% | |
| GCAATAGTTTAGTGAAAACC+AGG | + | chr8.4:1321863-1321882 | MS.gene96287:intron | 35.0% | |
| GGAATATCTGGATCAAATCA+TGG | + | chr8.4:1324384-1324403 | MS.gene96287:intron | 35.0% | |
| GGGATTTCTTCTCTAATCTA+TGG | - | chr8.4:1323824-1323843 | None:intergenic | 35.0% | |
| GTCATTACCCAAGAACATAT+TGG | + | chr8.4:1325100-1325119 | MS.gene96287:CDS | 35.0% | |
| GTGAAGGGATTTAACAAATC+AGG | + | chr8.4:1323616-1323635 | MS.gene96287:intron | 35.0% | |
| GTGACTAGTGACAAGTATAT+AGG | + | chr8.4:1323254-1323273 | MS.gene96287:intron | 35.0% | |
| TAGAAGCTGCAAGCAAATAT+TGG | + | chr8.4:1322759-1322778 | MS.gene96287:CDS | 35.0% | |
| TAGAGTCTGAAGATCTTGAT+TGG | + | chr8.4:1323046-1323065 | MS.gene96287:CDS | 35.0% | |
| TAGATTAGAGAAGAAATCCC+TGG | + | chr8.4:1323824-1323843 | MS.gene96287:intron | 35.0% | |
| TATCCAGGATCTCTTAATCT+AGG | + | chr8.4:1324727-1324746 | MS.gene96287:intron | 35.0% | |
| TATGAGTGAATTGAGACCTA+AGG | - | chr8.4:1323413-1323432 | None:intergenic | 35.0% | |
| TCACCTTGTCTTTAATGTGA+AGG | + | chr8.4:1323600-1323619 | MS.gene96287:intron | 35.0% | |
| TCACGTAGTCATTTATCACA+TGG | + | chr8.4:1322205-1322224 | MS.gene96287:intron | 35.0% | |
| TCCTCAACATTGTTCAACAA+AGG | - | chr8.4:1321133-1321152 | None:intergenic | 35.0% | |
| TCCTTTGTTGAACAATGTTG+AGG | + | chr8.4:1321129-1321148 | MS.gene96287:CDS | 35.0% | |
| TCTTCTCTAATCTATGGTTG+GGG | - | chr8.4:1323818-1323837 | None:intergenic | 35.0% | |
| TGAAAAAACTTGGCAGATAG+TGG | + | chr8.4:1324865-1324884 | MS.gene96287:intron | 35.0% | |
| TGAAAGGCAAACATCTCATA+TGG | + | chr8.4:1321972-1321991 | MS.gene96287:intron | 35.0% | |
| TGATAGACAAACAAACAACC+TGG | - | chr8.4:1321884-1321903 | None:intergenic | 35.0% | |
| TGGAGGACTATATCAATGAA+AGG | + | chr8.4:1321956-1321975 | MS.gene96287:intron | 35.0% | |
| TGTATGTTTCACCTTATACG+GGG | + | chr8.4:1320777-1320796 | MS.gene96287:CDS | 35.0% | |
| TTATTTGTAAGAAAGGGGGA+CGG | - | chr8.4:1323496-1323515 | None:intergenic | 35.0% | |
| TTCATTGATATAGTCCTCCA+AGG | - | chr8.4:1321956-1321975 | None:intergenic | 35.0% | |
| TTGGTGAAACCACTATTTGA+GGG | + | chr8.4:1324455-1324474 | MS.gene96287:intron | 35.0% | |
| TTTAGCCATGATGATATTCC+CGG | + | chr8.4:1321594-1321613 | MS.gene96287:CDS | 35.0% | |
| TTTGCTTGCAGCTTCTATAT+AGG | - | chr8.4:1322756-1322775 | None:intergenic | 35.0% | |
| TTTGGTGAAACCACTATTTG+AGG | + | chr8.4:1324454-1324473 | MS.gene96287:intron | 35.0% | |
| ! | AACTTTGAAAGAAGAACTGC+TGG | - | chr8.4:1323026-1323045 | None:intergenic | 35.0% |
| ! | CTACTTGTTTAAAGCTTCCA+AGG | + | chr8.4:1322462-1322481 | MS.gene96287:intron | 35.0% |
| ! | GAATTCCTCTTTTTGAACAG+AGG | + | chr8.4:1320432-1320451 | MS.gene96287:CDS | 35.0% |
| ! | GTTCAACAAAGGATTAGCAA+GGG | - | chr8.4:1321122-1321141 | None:intergenic | 35.0% |
| ! | TCAGCATCAAGTTTAGGTTT+AGG | - | chr8.4:1320695-1320714 | None:intergenic | 35.0% |
| ! | TGTTCAACAAAGGATTAGCA+AGG | - | chr8.4:1321123-1321142 | None:intergenic | 35.0% |
| !! | AACTTGCTGATAGTTTGTTG+AGG | + | chr8.4:1321068-1321087 | MS.gene96287:CDS | 35.0% |
| !! | ATATCTTAGTCTTGTAGAGG+AGG | - | chr8.4:1324483-1324502 | None:intergenic | 35.0% |
| !! | GAACAGAGGTTGATTTTCAA+TGG | + | chr8.4:1320446-1320465 | MS.gene96287:CDS | 35.0% |
| !! | TATCATGGAAGCATTTGTGA+TGG | - | chr8.4:1322010-1322029 | None:intergenic | 35.0% |
| !! | TGCATTAGCTTTGATGCATA+AGG | + | chr8.4:1322639-1322658 | MS.gene96287:CDS | 35.0% |
| !!! | ACCATTTTTGAGGCTGTTTT+AGG | + | chr8.4:1322105-1322124 | MS.gene96287:intron | 35.0% |
| !!! | ACTACAATGTTTTTTCCACC+AGG | - | chr8.4:1322880-1322899 | None:intergenic | 35.0% |
| !!! | CCATTTTTGAGGCTGTTTTA+GGG | + | chr8.4:1322106-1322125 | MS.gene96287:intron | 35.0% |
| !!! | CCTCCAAGAATCATTTTTTC+TGG | + | chr8.4:1323717-1323736 | MS.gene96287:intron | 35.0% |
| !!! | GAACATATTGGCTCTAGTTT+TGG | + | chr8.4:1325112-1325131 | MS.gene96287:CDS | 35.0% |
| !!! | GGTTTTTGCCATTTTTGGTT+TGG | + | chr8.4:1324211-1324230 | MS.gene96287:intron | 35.0% |
| !!! | GTCAGTTAGTTTTTAGGAGT+TGG | - | chr8.4:1323524-1323543 | None:intergenic | 35.0% |
| AACAACACTACAGGAACTTC+TGG | - | chr8.4:1323751-1323770 | None:intergenic | 40.0% | |
| AACATCTCATATGGCAAAGC+AGG | + | chr8.4:1321981-1322000 | MS.gene96287:intron | 40.0% | |
| AAGAAGAATGAGGAGAGCTA+GGG | - | chr8.4:1324300-1324319 | None:intergenic | 40.0% | |
| AAGACGATCACCAGATTCAT+GGG | - | chr8.4:1325002-1325021 | None:intergenic | 40.0% | |
| AATATTAAGCATCACCCAGC+AGG | - | chr8.4:1323902-1323921 | None:intergenic | 40.0% | |
| ACAATGTGTAAGGTCATCCA+GGG | - | chr8.4:1323844-1323863 | None:intergenic | 40.0% | |
| ACAGGCATAGATGAATAAGC+TGG | - | chr8.4:1325061-1325080 | None:intergenic | 40.0% | |
| ACTGATTGTACAACAGACGA+AGG | - | chr8.4:1321282-1321301 | None:intergenic | 40.0% | |
| AGAAATGAAGAAGGGTTGAG+TGG | - | chr8.4:1324537-1324556 | None:intergenic | 40.0% | |
| AGAAGCAACAGAAGGAAATG+TGG | - | chr8.4:1322145-1322164 | None:intergenic | 40.0% | |
| AGAAGTTCCTGTAGTGTTGT+TGG | + | chr8.4:1323750-1323769 | MS.gene96287:intron | 40.0% | |
| AGCTGCTGAAATTTCACTTG+CGG | + | chr8.4:1320982-1321001 | MS.gene96287:CDS | 40.0% | |
| ATATTCCTGTCAAGAAGCCA+AGG | - | chr8.4:1324371-1324390 | None:intergenic | 40.0% | |
| ATGAAACGTCTTGGACAATG+AGG | - | chr8.4:1320855-1320874 | None:intergenic | 40.0% | |
| ATGTCACCAATTTCGAAGCT+AGG | + | chr8.4:1321566-1321585 | MS.gene96287:CDS | 40.0% | |
| CAAAAACCATTGTCCTGTGT+TGG | - | chr8.4:1324199-1324218 | None:intergenic | 40.0% | |
| CAACCTAGATTAAGAGATCC+TGG | - | chr8.4:1324733-1324752 | None:intergenic | 40.0% | |
| CAAGGTAACAAGAACGGAAA+TGG | - | chr8.4:1320759-1320778 | None:intergenic | 40.0% | |
| CAATGGTAAACAGCTTCAGT+GGG | + | chr8.4:1320463-1320482 | MS.gene96287:CDS | 40.0% | |
| CAGGCATAGATGAATAAGCT+GGG | - | chr8.4:1325060-1325079 | None:intergenic | 40.0% | |
| CCAAGGTACATCATACATTG+TGG | + | chr8.4:1322479-1322498 | MS.gene96287:intron | 40.0% | |
| CCACAATGTATGATGTACCT+TGG | - | chr8.4:1322482-1322501 | None:intergenic | 40.0% | |
| CCCTAAAACAGCCTCAAAAA+TGG | - | chr8.4:1322109-1322128 | None:intergenic | 40.0% | |
| CTCTTCAGCTGCAATTTGTA+AGG | - | chr8.4:1321817-1321836 | None:intergenic | 40.0% | |
| CTGAGGATGAGAATCACAAA+GGG | + | chr8.4:1321008-1321027 | MS.gene96287:CDS | 40.0% | |
| CTGCAAGCAAATATTGGAGA+TGG | + | chr8.4:1322765-1322784 | MS.gene96287:CDS | 40.0% | |
| GAAATGAAGAAGGGTTGAGT+GGG | - | chr8.4:1324536-1324555 | None:intergenic | 40.0% | |
| GACGTTTATTAGAGAAGTGG+AGG | + | chr8.4:1322822-1322841 | MS.gene96287:CDS | 40.0% | |
| GAGATTCACTGACAAGGAAA+TGG | + | chr8.4:1321342-1321361 | MS.gene96287:CDS | 40.0% | |
| GAGGAATTTGGATTTGAGCT+TGG | + | chr8.4:1321087-1321106 | MS.gene96287:CDS | 40.0% | |
| GCAGAATCAGCATCAAGTTT+AGG | - | chr8.4:1320701-1320720 | None:intergenic | 40.0% | |
| GGATTTAACAAATCAGGGAC+AGG | + | chr8.4:1323622-1323641 | MS.gene96287:intron | 40.0% | |
| TAAGAAGAATGAGGAGAGCT+AGG | - | chr8.4:1324301-1324320 | None:intergenic | 40.0% | |
| TCAATGGTAAACAGCTTCAG+TGG | + | chr8.4:1320462-1320481 | MS.gene96287:CDS | 40.0% | |
| TCACCAAAAAGACGTCATGA+AGG | - | chr8.4:1324442-1324461 | None:intergenic | 40.0% | |
| TCAGCAAGTTCACGAACAAA+CGG | - | chr8.4:1321058-1321077 | None:intergenic | 40.0% | |
| TCTGAGGATGAGAATCACAA+AGG | + | chr8.4:1321007-1321026 | MS.gene96287:CDS | 40.0% | |
| TCTTGTACTCAAGAATCCAC+TGG | - | chr8.4:1321546-1321565 | None:intergenic | 40.0% | |
| TGACAAGGAAATGGTGTTTG+AGG | + | chr8.4:1321351-1321370 | MS.gene96287:CDS | 40.0% | |
| TTAACAACTTGCCAAGCTTG+AGG | - | chr8.4:1320566-1320585 | None:intergenic | 40.0% | |
| TTCACCTTATACGGGGAATA+AGG | + | chr8.4:1320784-1320803 | MS.gene96287:CDS | 40.0% | |
| TTGATGCATAAGGTGCAAGT+TGG | + | chr8.4:1322649-1322668 | MS.gene96287:CDS | 40.0% | |
| TTGCAGCTTCTATATAGGTC+AGG | - | chr8.4:1322751-1322770 | None:intergenic | 40.0% | |
| TTTCCAATCTTCGACGGAAA+TGG | - | chr8.4:1323094-1323113 | None:intergenic | 40.0% | |
| TTTCTTCCAATGACCAACAC+AGG | + | chr8.4:1324183-1324202 | MS.gene96287:intron | 40.0% | |
| ! | AACAAAGGATTAGCAAGGGA+AGG | - | chr8.4:1321118-1321137 | None:intergenic | 40.0% |
| ! | ACAAAGGATTAGCAAGGGAA+GGG | - | chr8.4:1321117-1321136 | None:intergenic | 40.0% |
| ! | ATAGGATTGCTTGTTGCTTG+AGG | + | chr8.4:1322336-1322355 | MS.gene96287:intron | 40.0% |
| ! | GTGTTTTTCTTGCAATTGGC+TGG | + | chr8.4:1322688-1322707 | MS.gene96287:CDS | 40.0% |
| ! | TCGCGTGTTTTTCTTGCAAT+TGG | + | chr8.4:1322684-1322703 | MS.gene96287:CDS | 40.0% |
| ! | TTCCTGTAGTGTTGTTGGTT+TGG | + | chr8.4:1323755-1323774 | MS.gene96287:intron | 40.0% |
| !! | CTTTAGAGGCGAGTATTGAT+AGG | - | chr8.4:1323578-1323597 | None:intergenic | 40.0% |
| !!! | TCAGATATCTTGGTTTTGGG+AGG | + | chr8.4:1323152-1323171 | MS.gene96287:CDS | 40.0% |
| !!! | TTGGCTCTAGTTTTGGTACT+TGG | + | chr8.4:1325119-1325138 | MS.gene96287:CDS | 40.0% |
| AAACCACGAAAGCCTTCAAC+TGG | - | chr8.4:1324953-1324972 | None:intergenic | 45.0% | |
| AAATGCACGAGCAACATCCA+TGG | - | chr8.4:1324080-1324099 | None:intergenic | 45.0% | |
| AAGAATCCACTGGTGTTCGT+CGG | - | chr8.4:1321536-1321555 | None:intergenic | 45.0% | |
| AAGTGGAGGAATTAGGACAG+AGG | + | chr8.4:1322836-1322855 | MS.gene96287:CDS | 45.0% | |
| AATTTCACTTGCGGCATCTG+AGG | + | chr8.4:1320991-1321010 | MS.gene96287:CDS | 45.0% | |
| AGAAAGGGGGACGGAATAAT+TGG | - | chr8.4:1323487-1323506 | None:intergenic | 45.0% | |
| AGTCCTCACAGGGACTAAAA+AGG | - | chr8.4:1321164-1321183 | None:intergenic | 45.0% | |
| AGTTGAAGGCTTTCGTGGTT+TGG | + | chr8.4:1324952-1324971 | MS.gene96287:CDS | 45.0% | |
| ATCTTGATTGGATGCTGCGT+GGG | + | chr8.4:1323058-1323077 | MS.gene96287:CDS | 45.0% | |
| ATGCCTCCTAGCTTCGAAAT+TGG | - | chr8.4:1321575-1321594 | None:intergenic | 45.0% | |
| CAAATTGCAGCTGAAGAGTG+AGG | + | chr8.4:1321819-1321838 | MS.gene96287:intron | 45.0% | |
| CAATGACCAACACAGGACAA+TGG | + | chr8.4:1324190-1324209 | MS.gene96287:intron | 45.0% | |
| CAGCAGGACAAGAACAAGAA+TGG | + | chr8.4:1321232-1321251 | MS.gene96287:CDS | 45.0% | |
| CAGGTTTCACACTTTGCCAA+AGG | + | chr8.4:1322970-1322989 | MS.gene96287:CDS | 45.0% | |
| CGTCATGAAGGACCTTTAGA+AGG | - | chr8.4:1324430-1324449 | None:intergenic | 45.0% | |
| CTTAGAGACTCTGATGCAGT+GGG | - | chr8.4:1323291-1323310 | None:intergenic | 45.0% | |
| CTTGAGTACTTCAGCTTCTG+TGG | + | chr8.4:1322607-1322626 | MS.gene96287:CDS | 45.0% | |
| GAAGACGATCACCAGATTCA+TGG | - | chr8.4:1325003-1325022 | None:intergenic | 45.0% | |
| GACAATGTGTAAGGTCATCC+AGG | - | chr8.4:1323845-1323864 | None:intergenic | 45.0% | |
| GACGCTAATCTTCACCTTGT+TGG | + | chr8.4:1320518-1320537 | MS.gene96287:CDS | 45.0% | |
| GCTGAAGAGTGAGGATTTAG+TGG | + | chr8.4:1321828-1321847 | MS.gene96287:intron | 45.0% | |
| GGACAAGAGATTCACTGACA+AGG | + | chr8.4:1321336-1321355 | MS.gene96287:CDS | 45.0% | |
| GGACTTGTAAATGTGGAGAC+GGG | - | chr8.4:1324981-1325000 | None:intergenic | 45.0% | |
| GGATGAGAATCACAAAGGGT+TGG | + | chr8.4:1321012-1321031 | MS.gene96287:CDS | 45.0% | |
| GGCTTCTTGACAGGAATATC+TGG | + | chr8.4:1324372-1324391 | MS.gene96287:intron | 45.0% | |
| GGGACTTGTAAATGTGGAGA+CGG | - | chr8.4:1324982-1325001 | None:intergenic | 45.0% | |
| GGTAACAAGAACGGAAATGG+CGG | - | chr8.4:1320756-1320775 | None:intergenic | 45.0% | |
| GTACAGAACATCCTCAAGCT+TGG | + | chr8.4:1320552-1320571 | MS.gene96287:CDS | 45.0% | |
| GTGTGCTTTCCAATCTTCGA+CGG | - | chr8.4:1323100-1323119 | None:intergenic | 45.0% | |
| GTTGAAGGCTTTCGTGGTTT+GGG | + | chr8.4:1324953-1324972 | MS.gene96287:CDS | 45.0% | |
| TAACAAATCAGGGACAGGGA+CGG | + | chr8.4:1323627-1323646 | MS.gene96287:intron | 45.0% | |
| TACTACGCATTCGACCAACA+AGG | - | chr8.4:1320535-1320554 | None:intergenic | 45.0% | |
| TCACCAATTTCGAAGCTAGG+AGG | + | chr8.4:1321569-1321588 | MS.gene96287:CDS | 45.0% | |
| TCGTAGTCTTCTTTCACCTC+CGG | - | chr8.4:1321616-1321635 | None:intergenic | 45.0% | |
| TCTTAGAGACTCTGATGCAG+TGG | - | chr8.4:1323292-1323311 | None:intergenic | 45.0% | |
| TGAATTGAGACCTAAGGGCA+AGG | - | chr8.4:1323407-1323426 | None:intergenic | 45.0% | |
| TGCATGAGATGCTCATTGAC+AGG | + | chr8.4:1321641-1321660 | MS.gene96287:CDS | 45.0% | |
| TGGACGGAGAACCAAAGTTT+AGG | - | chr8.4:1324267-1324286 | None:intergenic | 45.0% | |
| TGTAACATCCATAGCTGAGC+AGG | + | chr8.4:1322951-1322970 | MS.gene96287:CDS | 45.0% | |
| TTAAGACGAGCTTGCATGAC+AGG | - | chr8.4:1325079-1325098 | None:intergenic | 45.0% | |
| TTACCAGTTGAAGGCTTTCG+TGG | + | chr8.4:1324947-1324966 | MS.gene96287:CDS | 45.0% | |
| ! | ATGCCATTTCCGTCGAAGAT+TGG | + | chr8.4:1323088-1323107 | MS.gene96287:CDS | 45.0% |
| ! | CAAAGGATTAGCAAGGGAAG+GGG | - | chr8.4:1321116-1321135 | None:intergenic | 45.0% |
| ! | CATTGTCCTGTGTTGGTCAT+TGG | - | chr8.4:1324192-1324211 | None:intergenic | 45.0% |
| ! | GGTCCTTCATGACGTCTTTT+TGG | + | chr8.4:1324436-1324455 | MS.gene96287:intron | 45.0% |
| ! | TATGGGTTGCATTGCACTGA+GGG | - | chr8.4:1324123-1324142 | None:intergenic | 45.0% |
| ! | TCTCATCTTGAGTACTGCCT+TGG | + | chr8.4:1324351-1324370 | MS.gene96287:intron | 45.0% |
| ! | TTAGTGGCAAAAAGCGCATG+TGG | - | chr8.4:1322286-1322305 | None:intergenic | 45.0% |
| ! | TTATGGGTTGCATTGCACTG+AGG | - | chr8.4:1324124-1324143 | None:intergenic | 45.0% |
| !! | AAGCCTTTTTAGTCCCTGTG+AGG | + | chr8.4:1321158-1321177 | MS.gene96287:CDS | 45.0% |
| !! | CAAGCCTTATTCCCCGTATA+AGG | - | chr8.4:1320791-1320810 | None:intergenic | 45.0% |
| !! | GAATCACAAAGGGTTGGTGT+TGG | + | chr8.4:1321018-1321037 | MS.gene96287:CDS | 45.0% |
| !! | GGCGAGTATTGATAGGTGAT+CGG | - | chr8.4:1323571-1323590 | None:intergenic | 45.0% |
| !! | TGTAGTGTTGTTGGTTTGGC+CGG | + | chr8.4:1323759-1323778 | MS.gene96287:intron | 45.0% |
| !! | TTTTTAGTCCCTGTGAGGAC+TGG | + | chr8.4:1321163-1321182 | MS.gene96287:CDS | 45.0% |
| AACAAATCAGGGACAGGGAC+GGG | + | chr8.4:1323628-1323647 | MS.gene96287:intron | 50.0% | |
| ACGGGAACAGCCAAATGACT+TGG | + | chr8.4:1323646-1323665 | MS.gene96287:intron | 50.0% | |
| ACTGCGTGCTGGACTGTTTA+TGG | + | chr8.4:1321717-1321736 | MS.gene96287:CDS | 50.0% | |
| AGAAGAGAGGGCTTGAAAGC+AGG | - | chr8.4:1323789-1323808 | None:intergenic | 50.0% | |
| AGAGCTAGGGATCTTGGAAC+TGG | - | chr8.4:1324287-1324306 | None:intergenic | 50.0% | |
| AGCCATGATGATATTCCCGG+AGG | + | chr8.4:1321597-1321616 | MS.gene96287:CDS | 50.0% | |
| AGCCTGCGTATGAAACGTCT+TGG | - | chr8.4:1320864-1320883 | None:intergenic | 50.0% | |
| ATGAGGAGAGCTAGGGATCT+TGG | - | chr8.4:1324293-1324312 | None:intergenic | 50.0% | |
| ATTGAGACCTAAGGGCAAGG+TGG | - | chr8.4:1323404-1323423 | None:intergenic | 50.0% | |
| CACCTCCGGGAATATCATCA+TGG | - | chr8.4:1321602-1321621 | None:intergenic | 50.0% | |
| CATATGCAGTGTGACCTGCT+GGG | + | chr8.4:1323885-1323904 | MS.gene96287:intron | 50.0% | |
| CGTAGTCTTCTTTCACCTCC+GGG | - | chr8.4:1321615-1321634 | None:intergenic | 50.0% | |
| CTAGGGATCTTGGAACTGGA+CGG | - | chr8.4:1324283-1324302 | None:intergenic | 50.0% | |
| GAGCAACATCCATGGATGAG+AGG | - | chr8.4:1324072-1324091 | None:intergenic | 50.0% | |
| GAGGAGGTTCCCTCAAATAG+TGG | - | chr8.4:1324467-1324486 | None:intergenic | 50.0% | |
| GATCTTGATTGGATGCTGCG+TGG | + | chr8.4:1323057-1323076 | MS.gene96287:CDS | 50.0% | |
| GGAGGTGAAAGAAGACTACG+AGG | + | chr8.4:1321615-1321634 | MS.gene96287:CDS | 50.0% | |
| GGCCAAACCAACAACACTAC+AGG | - | chr8.4:1323760-1323779 | None:intergenic | 50.0% | |
| GGTGGTAAGCAACACAACCA+CGG | - | chr8.4:1321210-1321229 | None:intergenic | 50.0% | |
| GGTTGAGTGGGAGCGATATA+AGG | - | chr8.4:1324524-1324543 | None:intergenic | 50.0% | |
| GTCCAAGACGTTTCATACGC+AGG | + | chr8.4:1320859-1320878 | MS.gene96287:CDS | 50.0% | |
| GTGTGAAACCTGCTCAGCTA+TGG | - | chr8.4:1322962-1322981 | None:intergenic | 50.0% | |
| GTTCTGCAGAGCTGTCACAA+AGG | - | chr8.4:1323366-1323385 | None:intergenic | 50.0% | |
| TACTGCCTTGGCTTCTTGAC+AGG | + | chr8.4:1324363-1324382 | MS.gene96287:intron | 50.0% | |
| TCAGTGGGAACAAACACTCG+CGG | + | chr8.4:1320478-1320497 | MS.gene96287:CDS | 50.0% | |
| TCTGTAACCACCTTGCCCTT+AGG | + | chr8.4:1323394-1323413 | MS.gene96287:intron | 50.0% | |
| TCTTGTTCTTGTCCTGCTGC+TGG | - | chr8.4:1321231-1321250 | None:intergenic | 50.0% | |
| TTGGGGACACACAGAAGAGA+GGG | - | chr8.4:1323801-1323820 | None:intergenic | 50.0% | |
| ! | GAAAGATAGAGAGAGCACGC+AGG | - | chr8.4:1321391-1321410 | None:intergenic | 50.0% |
| ! | TGGCAAAAAGCGCATGTGGT+TGG | - | chr8.4:1322282-1322301 | None:intergenic | 50.0% |
| ! | TTTTTCCACCAGGACACAGC+TGG | - | chr8.4:1322870-1322889 | None:intergenic | 50.0% |
| !! | CAAAGGGTTGGTGTTGGTTC+AGG | + | chr8.4:1321024-1321043 | MS.gene96287:CDS | 50.0% |
| AAAGCGATCCAGCTGTGTCC+TGG | + | chr8.4:1322859-1322878 | MS.gene96287:CDS | 55.0% | |
| AGTCCAGCACGCAGTGATTC+GGG | - | chr8.4:1321712-1321731 | None:intergenic | 55.0% | |
| CAGTCCAGCACGCAGTGATT+CGG | - | chr8.4:1321713-1321732 | None:intergenic | 55.0% | |
| CCAGCAGGTCACACTGCATA+TGG | - | chr8.4:1323887-1323906 | None:intergenic | 55.0% | |
| CCATATGCAGTGTGACCTGC+TGG | + | chr8.4:1323884-1323903 | MS.gene96287:intron | 55.0% | |
| GAACAAACACTCGCGGAGTG+TGG | + | chr8.4:1320485-1320504 | MS.gene96287:CDS | 55.0% | |
| GACTGGAATCGAGCAGCAAC+AGG | + | chr8.4:1321180-1321199 | MS.gene96287:CDS | 55.0% | |
| GAGTGGGCCGTAGTGAAAAG+TGG | - | chr8.4:1323944-1323963 | None:intergenic | 55.0% | |
| GCTCGATTCCAGTCCTCACA+GGG | - | chr8.4:1321174-1321193 | None:intergenic | 55.0% | |
| GGGCTTGAAAGCAGGCAATC+CGG | - | chr8.4:1323781-1323800 | None:intergenic | 55.0% | |
| GGTTGCATTGCACTGAGGGT+TGG | - | chr8.4:1324119-1324138 | None:intergenic | 55.0% | |
| GTGCGACATCCTCTCATCCA+TGG | + | chr8.4:1324060-1324079 | MS.gene96287:intron | 55.0% | |
| GTTGGGGACACACAGAAGAG+AGG | - | chr8.4:1323802-1323821 | None:intergenic | 55.0% | |
| TGCTCGATTCCAGTCCTCAC+AGG | - | chr8.4:1321175-1321194 | None:intergenic | 55.0% | |
| TGTTCTTGTCCTGCTGCTGG+TGG | - | chr8.4:1321228-1321247 | None:intergenic | 55.0% | |
| ! | TGTTGCTTACCACCAGCAGC+AGG | + | chr8.4:1321216-1321235 | MS.gene96287:CDS | 55.0% |
| GATCCCGAATCACTGCGTGC+TGG | + | chr8.4:1321706-1321725 | MS.gene96287:CDS | 60.0% | |
| AGAGGGCCGACGAACACCAG+TGG | + | chr8.4:1321527-1321546 | MS.gene96287:CDS | 65.0% | |
| GAGCAGCAACAGGCTCTCCG+TGG | + | chr8.4:1321190-1321209 | MS.gene96287:CDS | 65.0% | |
| GCGATCCAGCTGTGTCCTGG+TGG | + | chr8.4:1322862-1322881 | MS.gene96287:CDS | 65.0% | |
| TCATACGCAGGCTGCGCGTG+TGG | + | chr8.4:1320871-1320890 | MS.gene96287:CDS | 65.0% | |
| GCAGGCTGCGCGTGTGGCGT+TGG | + | chr8.4:1320877-1320896 | MS.gene96287:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 1320344 | 1325144 | 1320344 | ID=MS.gene96287 |
| chr8.4 | mRNA | 1320344 | 1325144 | 1320344 | ID=MS.gene96287.t1;Parent=MS.gene96287 |
| chr8.4 | exon | 1320344 | 1321759 | 1320344 | ID=MS.gene96287.t1.exon1;Parent=MS.gene96287.t1 |
| chr8.4 | CDS | 1320344 | 1321759 | 1320344 | ID=cds.MS.gene96287.t1;Parent=MS.gene96287.t1 |
| chr8.4 | exon | 1322589 | 1323173 | 1322589 | ID=MS.gene96287.t1.exon2;Parent=MS.gene96287.t1 |
| chr8.4 | CDS | 1322589 | 1323173 | 1322589 | ID=cds.MS.gene96287.t1;Parent=MS.gene96287.t1 |
| chr8.4 | exon | 1324881 | 1325144 | 1324881 | ID=MS.gene96287.t1.exon3;Parent=MS.gene96287.t1 |
| chr8.4 | CDS | 1324881 | 1325144 | 1324881 | ID=cds.MS.gene96287.t1;Parent=MS.gene96287.t1 |
| Gene Sequence |
| Protein sequence |
