AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006360.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006360.01.T01 MTR_4g109450 64.843 731 164 9 78 719 150 876 0.0 885
MsG0280006360.01.T01 MTR_7g028970 64.336 715 165 8 94 719 162 875 0.0 843
MsG0280006360.01.T01 MTR_4g109450 64.179 670 147 9 78 658 150 815 0.0 790
MsG0280006360.01.T01 MTR_2g099075 58.861 474 165 6 269 718 4 471 1.09e-178 519
MsG0280006360.01.T01 MTR_2g099075 57.333 75 18 2 1 70 1 66 2.60e-14 76.6
MsG0280006360.01.T01 MTR_7g012820 40.537 708 325 9 85 696 161 868 9.58e-161 488
MsG0280006360.01.T01 MTR_7g012820 40.537 708 325 9 85 696 232 939 5.49e-160 488
MsG0280006360.01.T01 MTR_6g013660 40.254 708 327 9 85 696 228 935 6.35e-159 485
MsG0280006360.01.T01 MTR_3g106160 39.441 715 336 9 85 702 240 954 5.64e-151 464
MsG0280006360.01.T01 MTR_2g006950 56.145 415 122 10 330 719 1 380 1.02e-132 405
MsG0280006360.01.T01 MTR_2g006950 68.487 238 55 3 485 719 350 570 1.79e-96 310
MsG0280006360.01.T01 MTR_3g498725 33.474 711 313 15 95 704 254 905 2.97e-108 350
MsG0280006360.01.T01 MTR_8g100040 32.973 740 332 16 72 704 227 909 4.32e-107 347
MsG0280006360.01.T01 MTR_3g102830 33.243 740 330 16 72 704 228 910 1.08e-106 346
MsG0280006360.01.T01 MTR_3g098310 31.772 683 312 13 109 704 336 951 3.32e-93 311
MsG0280006360.01.T01 MTR_3g461000 38.509 322 170 5 400 695 427 746 6.64e-66 233
MsG0280006360.01.T01 MTR_3g461000 34.524 252 100 6 86 273 162 412 5.71e-27 117
MsG0280006360.01.T01 MTR_7g096480 63.354 161 35 2 559 719 96 232 5.18e-58 197
MsG0280006360.01.T01 MTR_7g096480 52.294 109 34 3 396 500 1 95 1.17e-24 103
MsG0280006360.01.T01 MTR_3g098310 29.608 510 234 10 109 550 336 788 2.40e-54 200
MsG0280006360.01.T01 MTR_1614s0010 36.181 199 120 3 481 678 1 193 1.30e-26 108
MsG0280006360.01.T01 MTR_1g076440 50.588 85 42 0 475 559 159 243 4.28e-22 98.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006360.01.T01 AT1G74310 60.989 728 191 10 78 719 150 870 0.0 826
MsG0280006360.01.T01 AT1G74310 61.469 667 167 8 78 658 150 812 0.0 759
MsG0280006360.01.T01 AT5G15450 39.548 708 331 10 85 696 226 932 1.47e-158 484
MsG0280006360.01.T01 AT2G25140 40.113 708 327 9 85 695 231 938 2.75e-157 480
MsG0280006360.01.T01 AT4G14670 50.303 495 158 9 94 501 127 620 2.79e-133 407
MsG0280006360.01.T01 AT5G50920 33.898 708 308 17 95 701 256 904 9.57e-108 349
MsG0280006360.01.T01 AT3G48870 33.709 709 314 19 95 704 246 897 5.88e-104 339
MsG0280006360.01.T01 AT3G48870 33.709 709 314 19 95 704 277 928 3.11e-103 338
MsG0280006360.01.T01 AT3G48870 33.709 709 314 19 95 704 277 928 3.11e-103 338
MsG0280006360.01.T01 AT3G48870 33.709 709 314 19 95 704 277 928 3.11e-103 338
MsG0280006360.01.T01 AT5G51070 30.210 715 339 14 84 694 259 917 8.42e-86 290
MsG0280006360.01.T01 AT4G14675 39.189 148 58 1 563 710 1 116 2.56e-30 117

Find 158 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACCTTTCTTTATCATTT+TGG 0.120981 2:+881622 None:intergenic
CGCAAAGCTTTGGAAATTTA+TGG 0.135274 2:-883189 MsG0280006360.01.T01:CDS
CTGCTTGAAGTCTTAAATTA+TGG 0.168550 2:-880972 MsG0280006360.01.T01:CDS
GAGAGTGAAACTTCTTTCTT+TGG 0.210286 2:-883510 MsG0280006360.01.T01:CDS
GGCTAACAACCTCAGCTATT+TGG 0.215789 2:+881676 None:intergenic
CATCTCATAAGTGGACTTTC+AGG 0.227432 2:-880870 MsG0280006360.01.T01:CDS
GGTAAAACAGCTGTTGTTAA+AGG 0.241250 2:-883043 MsG0280006360.01.T01:CDS
AGAAGTGCAACTTTATTCTT+TGG 0.244608 2:-882319 MsG0280006360.01.T01:CDS
CTCACTCTCTTCCTTTCCTT+TGG 0.266455 2:+883563 None:intergenic
GAGTGGATAGGAATACTTAT+AGG 0.307426 2:-882929 MsG0280006360.01.T01:CDS
GTGAGATCTATAGCTGGTTT+TGG 0.315276 2:-881537 MsG0280006360.01.T01:CDS
GATACGAGAGCATTAGTTTC+CGG 0.328531 2:-882956 MsG0280006360.01.T01:CDS
CTCCTATTCCTTGGACCAAC+TGG 0.334694 2:-881490 MsG0280006360.01.T01:CDS
AGCTGGCTAGGATGCTTATA+AGG 0.347885 2:-880412 MsG0280006360.01.T01:CDS
AGAGTGAAACTTCTTTCTTT+GGG 0.355201 2:-883509 MsG0280006360.01.T01:CDS
GGAAATTTATGGTCGAGATT+TGG 0.362675 2:-883178 MsG0280006360.01.T01:CDS
TGCTTGAAGTCTTAAATTAT+GGG 0.364404 2:-880971 MsG0280006360.01.T01:CDS
AATTGGTTCCTCCTATTCCT+TGG 0.365955 2:-881499 MsG0280006360.01.T01:CDS
AGGAAGTGAGAAAGCATTTC+AGG 0.372211 2:-880809 MsG0280006360.01.T01:CDS
TGAAGTTAAGTTAATTGCTT+TGG 0.375671 2:-882978 MsG0280006360.01.T01:CDS
AATTGAATTGTTAGGTATGT+TGG 0.377879 2:-881098 MsG0280006360.01.T01:intron
AATGATAAAGAAAGGTTGAT+TGG 0.380463 2:-881618 MsG0280006360.01.T01:CDS
CTATGTACATGTCGGACTAC+TGG 0.383161 2:-881399 MsG0280006360.01.T01:CDS
TTGTCTAGTCAGTACATATC+TGG 0.387411 2:-882579 MsG0280006360.01.T01:intron
AACTTTATTCTTTGGAGAAA+AGG 0.394568 2:-882311 MsG0280006360.01.T01:CDS
GTAAAACAGCTGTTGTTAAA+GGG 0.407230 2:-883042 MsG0280006360.01.T01:CDS
AGTGGATAGGAATACTTATA+GGG 0.409625 2:-882928 MsG0280006360.01.T01:CDS
TTTGTTGTATTGTAGGAGTA+TGG 0.410226 2:-880479 MsG0280006360.01.T01:intron
ACAACCTCAGCTATTTGGTT+TGG 0.418309 2:+881681 None:intergenic
CGAGATTTGGTTGAAGAGGC+AGG 0.431684 2:-883165 MsG0280006360.01.T01:CDS
AGGAAATTGCTATCCTCAAC+AGG 0.434988 2:-882356 MsG0280006360.01.T01:CDS
CACCAGTTGGTCCAAGGAAT+AGG 0.436137 2:+881488 None:intergenic
TCTTCATCACGTCCGACAAC+AGG 0.439800 2:+883132 None:intergenic
GAAGCAGGAACGCAAAGCTT+TGG 0.443169 2:-883199 MsG0280006360.01.T01:CDS
TCACTACAGCATTTATTGCT+TGG 0.445015 2:+881556 None:intergenic
ACTAAATCAATTGCCTTGTC+AGG 0.445782 2:+882426 None:intergenic
ACTTTATTCTTTGGAGAAAA+GGG 0.451139 2:-882310 MsG0280006360.01.T01:CDS
AAAGGGTTGGCTCAGATGAT+AGG 0.452018 2:-883025 MsG0280006360.01.T01:CDS
TTAGCCGATGGACTGGTATA+CGG 0.456885 2:-881659 MsG0280006360.01.T01:CDS
GCCACAATTGTTGACTCTGC+TGG 0.457766 2:-880787 MsG0280006360.01.T01:CDS
AGCTTCTAAATGTGTGCAAA+AGG 0.459813 2:-883278 MsG0280006360.01.T01:CDS
CATACTTACATTTGCAAGAC+GGG 0.460559 2:+883460 None:intergenic
TGAAGAGCTTGTCTTATCTC+TGG 0.460699 2:-881841 MsG0280006360.01.T01:CDS
CTCTTTCTCGCGAGCCATTG+AGG 0.464567 2:-880743 MsG0280006360.01.T01:CDS
AGATTGATTGGTGCTGCACC+AGG 0.464646 2:-881358 MsG0280006360.01.T01:CDS
AGAGATTCAGACCTACGATA+TGG 0.469603 2:-881789 MsG0280006360.01.T01:CDS
GGAAGACCTCGATATCCAAT+TGG 0.469840 2:-881516 MsG0280006360.01.T01:CDS
GTTTGCAAGGTTGCATATGA+AGG 0.471807 2:-880718 MsG0280006360.01.T01:CDS
GTTGCATTCTCTTCCTGTTG+AGG 0.477862 2:+882343 None:intergenic
GAGATTGTTAATGCTGAAAC+GGG 0.478591 2:-880305 MsG0280006360.01.T01:CDS
TTGAGGATAGCAATTTCCTC+TGG 0.479416 2:+882360 None:intergenic
CTCAATGGCTCGCGAGAAAG+AGG 0.479438 2:+880744 None:intergenic
CACTCTGTGTCAAGATTGAT+TGG 0.480315 2:-881370 MsG0280006360.01.T01:CDS
AAGGAATAGGAGGAACCAAT+TGG 0.480797 2:+881501 None:intergenic
AGAGATTGTTAATGCTGAAA+CGG 0.482511 2:-880306 MsG0280006360.01.T01:CDS
CAGCTTGAATGTAGCACTGA+TGG 0.492920 2:-881735 MsG0280006360.01.T01:CDS
AAGAAGTGGAAGATGCTAAA+GGG 0.493762 2:-882886 MsG0280006360.01.T01:CDS
GGCAATTGATTTAGTTGATG+AGG 0.493813 2:-882418 MsG0280006360.01.T01:CDS
GACGATTAACTGAAGCTGTA+AGG 0.498021 2:-881061 MsG0280006360.01.T01:CDS
ATTATCATGACCTCAAACCT+TGG 0.498059 2:-880900 MsG0280006360.01.T01:CDS
TGAGAAAGGCATCACTTTGG+CGG 0.504058 2:-880676 MsG0280006360.01.T01:CDS
TGCTCGCGATAAAGTAATGC+AGG 0.506751 2:-880829 MsG0280006360.01.T01:CDS
AACAGCTGTTGTTAAAGGGT+TGG 0.511916 2:-883038 MsG0280006360.01.T01:CDS
AGCTTGAATGTAGCACTGAT+GGG 0.513937 2:-881734 MsG0280006360.01.T01:CDS
TTATGAGATGCTCGGATCCA+AGG 0.515420 2:+880883 None:intergenic
GGTTGATTGGACTTGGTGAC+AGG 0.517013 2:-881605 MsG0280006360.01.T01:CDS
GATGCTGGTCCGAATGGAAG+TGG 0.517666 2:-880356 MsG0280006360.01.T01:CDS
CTTATAGGTGAGACGGGTGT+TGG 0.518084 2:-883064 MsG0280006360.01.T01:intron
ATTGTTCTTATAGGTGAGAC+GGG 0.519936 2:-883070 MsG0280006360.01.T01:intron
ATTTCACCTCGATCAAACAT+AGG 0.520140 2:+882803 None:intergenic
AAAGAAGTGGAAGATGCTAA+AGG 0.521154 2:-882887 MsG0280006360.01.T01:CDS
ACGATATGGTGCAATTGATA+AGG 0.521944 2:-881775 MsG0280006360.01.T01:CDS
AGTTTAGTAAAGAGAAAGAG+AGG 0.523045 2:-881896 MsG0280006360.01.T01:CDS
AAAGAAAGGTTGATTGGACT+TGG 0.524278 2:-881612 MsG0280006360.01.T01:CDS
GAGGTTGTTAGCCGATGGAC+TGG 0.524764 2:-881666 MsG0280006360.01.T01:CDS
AACCTTGCAAACTTCCTCAA+TGG 0.527609 2:+880729 None:intergenic
TATGTACATGTCGGACTACT+GGG 0.531978 2:-881398 MsG0280006360.01.T01:CDS
ACAACGGTTTACGTTGATGC+TGG 0.534660 2:-880371 MsG0280006360.01.T01:CDS
TATACCAACCCACTTCCATT+CGG 0.536350 2:+880347 None:intergenic
CGGAAAGAACTTGACAACTT+AGG 0.542188 2:-881945 MsG0280006360.01.T01:CDS
TACGTTGATGCTGGTCCGAA+TGG 0.544377 2:-880362 MsG0280006360.01.T01:CDS
GATACTATTAGTATACTTCG+TGG 0.545801 2:-882672 MsG0280006360.01.T01:CDS
GTTGGCTCAGATGATAGGTA+AGG 0.546382 2:-883020 MsG0280006360.01.T01:CDS
GGATCCGAGCATCTCATAAG+TGG 0.547581 2:-880879 MsG0280006360.01.T01:CDS
TGCTGAGAAAGGCATCACTT+TGG 0.548749 2:-880679 MsG0280006360.01.T01:CDS
TGACAACTTAGGAGACAAGC+TGG 0.549649 2:-881934 MsG0280006360.01.T01:CDS
TTGGCCAAAATGATAAAGAA+AGG 0.551097 2:-881626 MsG0280006360.01.T01:CDS
TATTGTTCTTATAGGTGAGA+CGG 0.551849 2:-883071 MsG0280006360.01.T01:intron
AATTGAACTCTAACACCAGC+AGG 0.554311 2:+883596 None:intergenic
GAGTGAAACTTCTTTCTTTG+GGG 0.554927 2:-883508 MsG0280006360.01.T01:CDS
GGGAAACTTGATCCTGTTGT+CGG 0.555369 2:-883144 MsG0280006360.01.T01:CDS
TTCCTTGGACCAACTGGTGT+CGG 0.556177 2:-881484 MsG0280006360.01.T01:intron
AGCCATTGAGGAAGTTTGCA+AGG 0.558014 2:-880731 MsG0280006360.01.T01:CDS
GTGCTAGACCAACTGAAAAG+TGG 0.558410 2:-880457 MsG0280006360.01.T01:CDS
GTTTCCGGTGCTGAGTGGAT+AGG 0.559043 2:-882941 MsG0280006360.01.T01:CDS
TACCGACACCAGTTGGTCCA+AGG 0.560599 2:+881482 None:intergenic
AGTGGAAGATGCTAAAGGGA+AGG 0.564506 2:-882882 MsG0280006360.01.T01:CDS
TGAAAAGTGGATTGAGAACA+AGG 0.565594 2:-880444 MsG0280006360.01.T01:CDS
TAGCTGAGGTTGTTAGCCGA+TGG 0.570098 2:-881671 MsG0280006360.01.T01:CDS
GCTTGTCTTATCTCTGGAGG+AGG 0.572681 2:-881835 MsG0280006360.01.T01:CDS
GGTATACGGATGACCTGGCT+TGG 0.575997 2:-881645 MsG0280006360.01.T01:CDS
AGGTTGCACAATATAGTTGT+GGG 0.576981 2:-881585 MsG0280006360.01.T01:CDS
TGGTCGAGATTTGGTTGAAG+AGG 0.577488 2:-883169 MsG0280006360.01.T01:CDS
AAGTCCACTTATGAGATGCT+CGG 0.578688 2:+880875 None:intergenic
AGTTGATGAGGCTTGTGCAA+GGG 0.584296 2:-882406 MsG0280006360.01.T01:CDS
TCAATTTGATAGTCAGCCAA+AGG 0.587091 2:-883579 MsG0280006360.01.T01:CDS
TATTCCTATCCACTCAGCAC+CGG 0.587977 2:+882937 None:intergenic
CTCTGGAGGAGGCTGACAGT+TGG 0.588215 2:-881824 MsG0280006360.01.T01:CDS
GCTGTAGTGAGATCTATAGC+TGG 0.588552 2:-881543 MsG0280006360.01.T01:CDS
GAGATTTGGTTGAAGAGGCA+GGG 0.590390 2:-883164 MsG0280006360.01.T01:CDS
AGGTAGTGTCAAAGCTGGCT+AGG 0.590683 2:-880424 MsG0280006360.01.T01:CDS
TCCAGCAGAGTCAACAATTG+TGG 0.593158 2:+880786 None:intergenic
TTTATCGCGAGCAACTTCCA+TGG 0.593540 2:+880839 None:intergenic
AGAGGATTGATGAGATTCGA+AGG 0.595177 2:-881878 MsG0280006360.01.T01:CDS
GAACAAGGTAGTGTCAAAGC+TGG 0.596334 2:-880429 MsG0280006360.01.T01:CDS
ATATGGTGCAATTGATAAGG+TGG 0.598747 2:-881772 MsG0280006360.01.T01:CDS
CCATACTTACATTTGCAAGA+CGG 0.598863 2:+883459 None:intergenic
TTGATAGTCAGCCAAAGGAA+AGG 0.601324 2:-883574 MsG0280006360.01.T01:CDS
TTGAAACCTATGTTTGATCG+AGG 0.604726 2:-882809 MsG0280006360.01.T01:intron
TAGTTGATGAGGCTTGTGCA+AGG 0.606110 2:-882407 MsG0280006360.01.T01:CDS
GAGAAATATGAGGTTCGTCA+TGG 0.606189 2:-882642 MsG0280006360.01.T01:CDS
CAGTTGGTCCAAGGAATAGG+AGG 0.606404 2:+881491 None:intergenic
TGTTAGGTATGTTGGACATG+AGG 0.606750 2:-881090 MsG0280006360.01.T01:intron
TAACTGAAGCTGTAAGGAGA+AGG 0.608653 2:-881055 MsG0280006360.01.T01:CDS
AACTTAACTTCAGCAAGACA+AGG 0.610443 2:+882989 None:intergenic
GGACTGGTATACGGATGACC+TGG 0.613676 2:-881650 MsG0280006360.01.T01:CDS
CATTAGTTTCCGGTGCTGAG+TGG 0.616510 2:-882946 MsG0280006360.01.T01:CDS
ATGCTCGGATCCAAGGTTTG+AGG 0.618309 2:+880890 None:intergenic
CGGCTGCAACAACAATTGAA+CGG 0.618525 2:+882604 None:intergenic
TTGGCTCAGATGATAGGTAA+GGG 0.619613 2:-883019 MsG0280006360.01.T01:CDS
GGATAGGAATACTTATAGGG+AGG 0.621133 2:-882925 MsG0280006360.01.T01:CDS
CTAATAGTATCAGACACACT+AGG 0.627045 2:+882684 None:intergenic
TGGACTACAAGAGAAATATG+AGG 0.627910 2:-882652 MsG0280006360.01.T01:CDS
TTGAAGTCTTAAATTATGGG+AGG 0.628820 2:-880968 MsG0280006360.01.T01:CDS
CAGGTTGCACAATATAGTTG+TGG 0.632246 2:-881586 MsG0280006360.01.T01:CDS
TATCAATTGCACCATATCGT+AGG 0.635478 2:+881778 None:intergenic
AGGTAAAAGATGAATCCTGC+TGG 0.635506 2:-883611 None:intergenic
AATTATGGGAGGCTAACTGA+TGG 0.637108 2:-880957 MsG0280006360.01.T01:CDS
GCTTGAATGTAGCACTGATG+GGG 0.639385 2:-881733 MsG0280006360.01.T01:CDS
TCAACTTCATAGTCAGCCAG+AGG 0.642623 2:-882376 MsG0280006360.01.T01:CDS
AGAGCTTGTCTTATCTCTGG+AGG 0.644174 2:-881838 MsG0280006360.01.T01:CDS
ATGCTGGTCCGAATGGAAGT+GGG 0.644826 2:-880355 MsG0280006360.01.T01:CDS
AGGGCGTCATCTTCCTGACA+AGG 0.655997 2:-882439 MsG0280006360.01.T01:CDS
TTGATGTTGACAGACTCTGT+CGG 0.656139 2:-881705 MsG0280006360.01.T01:CDS
GGGAGGCTAACTGATGGACA+AGG 0.656241 2:-880951 MsG0280006360.01.T01:CDS
GAGGAACCAATTGGATATCG+AGG 0.658191 2:+881510 None:intergenic
AGAAATTGATGAGAATACAA+CGG 0.667738 2:-880387 MsG0280006360.01.T01:CDS
GTTGGTGACTATGTACATGT+CGG 0.670077 2:-881407 MsG0280006360.01.T01:CDS
TCATCCGTATACCAGTCCAT+CGG 0.680087 2:+881655 None:intergenic
TATGTACTGACTAGACAACT+CGG 0.687782 2:+882584 None:intergenic
GATTGATTGGTGCTGCACCA+GGG 0.689462 2:-881357 MsG0280006360.01.T01:intron
AGGTATGTTGGACATGAGGA+CGG 0.689751 2:-881086 MsG0280006360.01.T01:CDS
CGGACCAAACCAAATAGCTG+AGG 0.694161 2:-881685 MsG0280006360.01.T01:CDS
TGATGGACAAGGCAGAACTG+TGG 0.696859 2:-880940 MsG0280006360.01.T01:CDS
ACTTTCAGGAAAATGTACCA+TGG 0.708787 2:-880856 MsG0280006360.01.T01:CDS
TATGTTGGACATGAGGACGG+TGG 0.731698 2:-881083 MsG0280006360.01.T01:CDS
TGGTCCGAATGGAAGTGGGT+TGG 0.734063 2:-880351 MsG0280006360.01.T01:CDS
AGATTGTTAATGCTGAAACG+GGG 0.756258 2:-880304 MsG0280006360.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAGATATTATAAACTTA+AGG + Chr2:881809-881828 None:intergenic 10.0%
!!! TTATAGTTGATATTATTTAT+AGG - Chr2:881933-881952 MsG0280006360.01.T01:CDS 10.0%
!! TAAAAGCTTAAATTAATACT+TGG - Chr2:882604-882623 MsG0280006360.01.T01:CDS 15.0%
!!! GTTTTTGTTTTAACAATTTT+AGG - Chr2:880474-880493 MsG0280006360.01.T01:intron 15.0%
!!! TCTTTTATATTAACTATTTG+TGG - Chr2:881385-881404 MsG0280006360.01.T01:CDS 15.0%
!!! TTTATATTTTGTTGTATTGT+AGG - Chr2:883417-883436 MsG0280006360.01.T01:intron 15.0%
!!! TTTATTTATTTTGAGTTAGT+TGG - Chr2:881903-881922 MsG0280006360.01.T01:CDS 15.0%
!! AGTAACAATATTGTTCTTAT+AGG - Chr2:880824-880843 MsG0280006360.01.T01:CDS 20.0%
!! TAACTGTTGATATTATTTGT+AGG - Chr2:880572-880591 MsG0280006360.01.T01:intron 20.0%
!! TTTCTTATAGAATAATGCTT+TGG - Chr2:883328-883347 MsG0280006360.01.T01:intron 20.0%
!!! TTGTAACTTTTATTTCACAT+GGG + Chr2:882653-882672 None:intergenic 20.0%
!!! TTTGTAACTTTTATTTCACA+TGG + Chr2:882654-882673 None:intergenic 20.0%
! AATTGAATTGTTAGGTATGT+TGG - Chr2:882805-882824 MsG0280006360.01.T01:intron 25.0%
! ACATATTTCCTATATTCATC+AGG + Chr2:881148-881167 None:intergenic 25.0%
! ACGTGATGAAGAAATAATTA+AGG - Chr2:880782-880801 MsG0280006360.01.T01:CDS 25.0%
! AGAAATTGATGAGAATACAA+CGG - Chr2:883516-883535 MsG0280006360.01.T01:CDS 25.0%
! ATATAGGAAATATGTGGAAA+AGG - Chr2:881153-881172 MsG0280006360.01.T01:intron 25.0%
! CTTATCTATACTATGAAGAA+AGG + Chr2:880510-880529 None:intergenic 25.0%
! GATATATAAGATACACTTAC+AGG + Chr2:883297-883316 None:intergenic 25.0%
! GATGACAAATTTGAATTAAG+AGG + Chr2:881687-881706 None:intergenic 25.0%
! GTTGATATTATTTATAGGTG+CGG - Chr2:881938-881957 MsG0280006360.01.T01:CDS 25.0%
! TCATTGTGAATTGAATTGTT+AGG - Chr2:882797-882816 MsG0280006360.01.T01:intron 25.0%
! TGAAGTTAAGTTAATTGCTT+TGG - Chr2:880925-880944 MsG0280006360.01.T01:CDS 25.0%
! TGATGAATATAGGAAATATG+TGG - Chr2:881147-881166 MsG0280006360.01.T01:intron 25.0%
! TGCTTGAAGTCTTAAATTAT+GGG - Chr2:882932-882951 MsG0280006360.01.T01:CDS 25.0%
! TTAACTATTTGTGGATGTAT+TGG - Chr2:881394-881413 MsG0280006360.01.T01:CDS 25.0%
!! AACTTTATTCTTTGGAGAAA+AGG - Chr2:881592-881611 MsG0280006360.01.T01:CDS 25.0%
!! AATGATAAAGAAAGGTTGAT+TGG - Chr2:882285-882304 MsG0280006360.01.T01:CDS 25.0%
!! ACTTTATTCTTTGGAGAAAA+GGG - Chr2:881593-881612 MsG0280006360.01.T01:CDS 25.0%
!! TCAACCTTTCTTTATCATTT+TGG + Chr2:882284-882303 None:intergenic 25.0%
!! TCTCTTCATTATTTTCTACA+CGG + Chr2:883582-883601 None:intergenic 25.0%
!!! AGAGTGAGAAATTTTTTCTT+TGG - Chr2:880355-880374 MsG0280006360.01.T01:CDS 25.0%
!!! AGTGAGAAATTTTTTCTTTG+GGG - Chr2:880357-880376 MsG0280006360.01.T01:CDS 25.0%
!!! ATTTGATGATGAAAATCAGT+TGG - Chr2:882478-882497 MsG0280006360.01.T01:intron 25.0%
!!! GAGTGAGAAATTTTTTCTTT+GGG - Chr2:880356-880375 MsG0280006360.01.T01:CDS 25.0%
!!! TTTATTTTGAGTTAGTTGGA+AGG - Chr2:881907-881926 MsG0280006360.01.T01:CDS 25.0%
!!! TTTGTGTTTTTGTTTGTCAA+GGG - Chr2:881445-881464 MsG0280006360.01.T01:intron 25.0%
AAACAACACCTGATGAATAT+AGG - Chr2:881137-881156 MsG0280006360.01.T01:intron 30.0%
AATTTGAATTAAGAGGTCGT+TGG + Chr2:881680-881699 None:intergenic 30.0%
ACTATAGTCTACACTAGAAT+TGG + Chr2:882747-882766 None:intergenic 30.0%
AGAGATTGTTAATGCTGAAA+CGG - Chr2:883597-883616 MsG0280006360.01.T01:CDS 30.0%
AGAGTGAAACTTCTTTCTTT+GGG - Chr2:880394-880413 MsG0280006360.01.T01:CDS 30.0%
AGATTAAACACACAAGTGTT+TGG - Chr2:882627-882646 MsG0280006360.01.T01:CDS 30.0%
AGTGGATAGGAATACTTATA+GGG - Chr2:880975-880994 MsG0280006360.01.T01:CDS 30.0%
AGTTTAGTAAAGAGAAAGAG+AGG - Chr2:882007-882026 MsG0280006360.01.T01:intron 30.0%
CTGCTTGAAGTCTTAAATTA+TGG - Chr2:882931-882950 MsG0280006360.01.T01:CDS 30.0%
GATACTATTAGTATACTTCG+TGG - Chr2:881231-881250 MsG0280006360.01.T01:intron 30.0%
GTAAAACAGCTGTTGTTAAA+GGG - Chr2:880861-880880 MsG0280006360.01.T01:CDS 30.0%
GTTGATATTATTTGTAGGTG+CGG - Chr2:880577-880596 MsG0280006360.01.T01:intron 30.0%
TACAAAAAGATGTGTGCAAA+AGG - Chr2:880666-880685 MsG0280006360.01.T01:CDS 30.0%
TATTGTTCTTATAGGTGAGA+CGG - Chr2:880832-880851 MsG0280006360.01.T01:CDS 30.0%
TTGAAGTCTTAAATTATGGG+AGG - Chr2:882935-882954 MsG0280006360.01.T01:CDS 30.0%
TTGGCCAAAATGATAAAGAA+AGG - Chr2:882277-882296 MsG0280006360.01.T01:intron 30.0%
! AAATGTCGACGTTTGAATTT+TGG - Chr2:882693-882712 MsG0280006360.01.T01:CDS 30.0%
! AGAAGTGCAACTTTATTCTT+TGG - Chr2:881584-881603 MsG0280006360.01.T01:CDS 30.0%
! TTTGTTGTATTGTAGGAGTA+TGG - Chr2:883424-883443 MsG0280006360.01.T01:intron 30.0%
!! GTGTATATGTGTTATTTCGA+TGG - Chr2:880546-880565 MsG0280006360.01.T01:intron 30.0%
!! GTTTGTGTTTTTGTTTGTCA+AGG - Chr2:881444-881463 MsG0280006360.01.T01:intron 30.0%
AAAAGGATACAGCACTTGAA+AGG - Chr2:881170-881189 MsG0280006360.01.T01:intron 35.0%
AAAGAAGTGGAAGATGCTAA+AGG - Chr2:881016-881035 MsG0280006360.01.T01:CDS 35.0%
AACTTAACTTCAGCAAGACA+AGG + Chr2:880917-880936 None:intergenic 35.0%
AAGAAGTGGAAGATGCTAAA+GGG - Chr2:881017-881036 MsG0280006360.01.T01:CDS 35.0%
ACGATATGGTGCAATTGATA+AGG - Chr2:882128-882147 MsG0280006360.01.T01:intron 35.0%
ACTAAATCAATTGCCTTGTC+AGG + Chr2:881480-881499 None:intergenic 35.0%
ACTTTCAGGAAAATGTACCA+TGG - Chr2:883047-883066 MsG0280006360.01.T01:CDS 35.0%
AGATTGTTAATGCTGAAACG+GGG - Chr2:883599-883618 MsG0280006360.01.T01:CDS 35.0%
AGCTTCTAAATGTGTGCAAA+AGG - Chr2:880625-880644 MsG0280006360.01.T01:intron 35.0%
AGGTTGCACAATATAGTTGT+GGG - Chr2:882318-882337 MsG0280006360.01.T01:CDS 35.0%
ATATGGTGCAATTGATAAGG+TGG - Chr2:882131-882150 MsG0280006360.01.T01:intron 35.0%
ATTATCATGACCTCAAACCT+TGG - Chr2:883003-883022 MsG0280006360.01.T01:CDS 35.0%
ATTGTGCTTCTGCAATTGTA+AGG - Chr2:881829-881848 MsG0280006360.01.T01:CDS 35.0%
ATTGTTCTTATAGGTGAGAC+GGG - Chr2:880833-880852 MsG0280006360.01.T01:CDS 35.0%
ATTTCACCTCGATCAAACAT+AGG + Chr2:881103-881122 None:intergenic 35.0%
ATTTGTGGATGTATTGGATG+TGG - Chr2:881400-881419 MsG0280006360.01.T01:CDS 35.0%
CATACTTACATTTGCAAGAC+GGG + Chr2:880446-880465 None:intergenic 35.0%
CCATACTTACATTTGCAAGA+CGG + Chr2:880447-880466 None:intergenic 35.0%
CTAATAGTATCAGACACACT+AGG + Chr2:881222-881241 None:intergenic 35.0%
GAGAGTGAAACTTCTTTCTT+TGG - Chr2:880393-880412 MsG0280006360.01.T01:CDS 35.0%
GAGATTGTTAATGCTGAAAC+GGG - Chr2:883598-883617 MsG0280006360.01.T01:CDS 35.0%
GAGTGAAACTTCTTTCTTTG+GGG - Chr2:880395-880414 MsG0280006360.01.T01:CDS 35.0%
GAGTGGATAGGAATACTTAT+AGG - Chr2:880974-880993 MsG0280006360.01.T01:CDS 35.0%
GGAAATTTATGGTCGAGATT+TGG - Chr2:880725-880744 MsG0280006360.01.T01:CDS 35.0%
GGTAAAACAGCTGTTGTTAA+AGG - Chr2:880860-880879 MsG0280006360.01.T01:CDS 35.0%
TATCAATTGCACCATATCGT+AGG + Chr2:882128-882147 None:intergenic 35.0%
TCACTACAGCATTTATTGCT+TGG + Chr2:882350-882369 None:intergenic 35.0%
TGGACTACAAGAGAAATATG+AGG - Chr2:881251-881270 MsG0280006360.01.T01:intron 35.0%
TTGAAACCTATGTTTGATCG+AGG - Chr2:881094-881113 MsG0280006360.01.T01:intron 35.0%
TTGTCTAGTCAGTACATATC+TGG - Chr2:881324-881343 MsG0280006360.01.T01:intron 35.0%
! AAAGAAAGGTTGATTGGACT+TGG - Chr2:882291-882310 MsG0280006360.01.T01:CDS 35.0%
! GGCAATTGATTTAGTTGATG+AGG - Chr2:881485-881504 MsG0280006360.01.T01:CDS 35.0%
! TCAATTTGATAGTCAGCCAA+AGG - Chr2:880324-880343 MsG0280006360.01.T01:CDS 35.0%
!! CGCAAAGCTTTGGAAATTTA+TGG - Chr2:880714-880733 MsG0280006360.01.T01:CDS 35.0%
!! TATGTACTGACTAGACAACT+CGG + Chr2:881322-881341 None:intergenic 35.0%
!! TCAAAAAGTATCACACTGTG+TGG + Chr2:882874-882893 None:intergenic 35.0%
!! TGAAAAGTGGATTGAGAACA+AGG - Chr2:883459-883478 MsG0280006360.01.T01:intron 35.0%
!! TGTGATACTTTTTGAGCAAG+TGG - Chr2:882879-882898 MsG0280006360.01.T01:CDS 35.0%
!! TTCTCAATCCACTTTTCAGT+TGG + Chr2:883457-883476 None:intergenic 35.0%
!! TTTTCTTTGGGGAAAAAGAC+AGG - Chr2:880368-880387 MsG0280006360.01.T01:CDS 35.0%
AACAGCTGTTGTTAAAGGGT+TGG - Chr2:880865-880884 MsG0280006360.01.T01:CDS 40.0%
AACCTTGCAAACTTCCTCAA+TGG + Chr2:883177-883196 None:intergenic 40.0%
AAGGAATAGGAGGAACCAAT+TGG + Chr2:882405-882424 None:intergenic 40.0%
AAGTCCACTTATGAGATGCT+CGG + Chr2:883031-883050 None:intergenic 40.0%
AATTATGGGAGGCTAACTGA+TGG - Chr2:882946-882965 MsG0280006360.01.T01:CDS 40.0%
AATTGAACTCTAACACCAGC+AGG + Chr2:880310-880329 None:intergenic 40.0%
ACAACCTCAGCTATTTGGTT+TGG + Chr2:882225-882244 None:intergenic 40.0%
ACTTGAAAGGAGGTTTCAAC+AGG - Chr2:881183-881202 MsG0280006360.01.T01:intron 40.0%
AGAGATTCAGACCTACGATA+TGG - Chr2:882114-882133 MsG0280006360.01.T01:intron 40.0%
AGAGGATTGATGAGATTCGA+AGG - Chr2:882025-882044 MsG0280006360.01.T01:intron 40.0%
AGGAAATTGCTATCCTCAAC+AGG - Chr2:881547-881566 MsG0280006360.01.T01:CDS 40.0%
ATGTGACAAAAACGTGAAGC+AGG - Chr2:880689-880708 MsG0280006360.01.T01:CDS 40.0%
CACTCTGTGTCAAGATTGAT+TGG - Chr2:882533-882552 MsG0280006360.01.T01:intron 40.0%
CAGGTTGCACAATATAGTTG+TGG - Chr2:882317-882336 MsG0280006360.01.T01:CDS 40.0%
CCGTCTTGCAAATGTAAGTA+TGG - Chr2:880444-880463 MsG0280006360.01.T01:CDS 40.0%
CGAGGTGAAATTAGATGCAT+CGG - Chr2:881112-881131 MsG0280006360.01.T01:intron 40.0%
CGGAAAGAACTTGACAACTT+AGG - Chr2:881958-881977 MsG0280006360.01.T01:intron 40.0%
CTTCTGCAATTGTAAGGTAG+TGG - Chr2:881835-881854 MsG0280006360.01.T01:CDS 40.0%
GACGATTAACTGAAGCTGTA+AGG - Chr2:882842-882861 MsG0280006360.01.T01:CDS 40.0%
GAGAAATATGAGGTTCGTCA+TGG - Chr2:881261-881280 MsG0280006360.01.T01:intron 40.0%
GCTAACCTAATAACTTACCC+TGG + Chr2:882566-882585 None:intergenic 40.0%
GGATAGGAATACTTATAGGG+AGG - Chr2:880978-880997 MsG0280006360.01.T01:CDS 40.0%
GTTTGCAAGGTTGCATATGA+AGG - Chr2:883185-883204 MsG0280006360.01.T01:CDS 40.0%
TAACTGAAGCTGTAAGGAGA+AGG - Chr2:882848-882867 MsG0280006360.01.T01:CDS 40.0%
TATACCAACCCACTTCCATT+CGG + Chr2:883559-883578 None:intergenic 40.0%
TATGTACATGTCGGACTACT+GGG - Chr2:882505-882524 MsG0280006360.01.T01:intron 40.0%
TGAAGAGCTTGTCTTATCTC+TGG - Chr2:882062-882081 MsG0280006360.01.T01:intron 40.0%
TGTTAGGTATGTTGGACATG+AGG - Chr2:882813-882832 MsG0280006360.01.T01:CDS 40.0%
TTGAGGATAGCAATTTCCTC+TGG + Chr2:881546-881565 None:intergenic 40.0%
TTGATGTTGACAGACTCTGT+CGG - Chr2:882198-882217 MsG0280006360.01.T01:intron 40.0%
TTGGCTCAGATGATAGGTAA+GGG - Chr2:880884-880903 MsG0280006360.01.T01:CDS 40.0%
! AAGGCAGAACTGTGGATTTT+AGG - Chr2:882971-882990 MsG0280006360.01.T01:CDS 40.0%
! AATTGGTTCCTCCTATTCCT+TGG - Chr2:882404-882423 MsG0280006360.01.T01:CDS 40.0%
! CATCTCATAAGTGGACTTTC+AGG - Chr2:883033-883052 MsG0280006360.01.T01:CDS 40.0%
! GCTAATCGTTTTGCTGAGAA+AGG - Chr2:883213-883232 MsG0280006360.01.T01:CDS 40.0%
! GTATTGGATGTGGATGGTTT+TGG - Chr2:881410-881429 MsG0280006360.01.T01:intron 40.0%
! TTGATAGTCAGCCAAAGGAA+AGG - Chr2:880329-880348 MsG0280006360.01.T01:CDS 40.0%
!! AGCTTGAATGTAGCACTGAT+GGG - Chr2:882169-882188 MsG0280006360.01.T01:intron 40.0%
!! AGGAAGTGAGAAAGCATTTC+AGG - Chr2:883094-883113 MsG0280006360.01.T01:intron 40.0%
!! CGGTAAAACAAAACTTGCTG+AGG - Chr2:882439-882458 MsG0280006360.01.T01:CDS 40.0%
!! GATACGAGAGCATTAGTTTC+CGG - Chr2:880947-880966 MsG0280006360.01.T01:CDS 40.0%
!! GTGAGATCTATAGCTGGTTT+TGG - Chr2:882366-882385 MsG0280006360.01.T01:CDS 40.0%
!! GTTGGTGACTATGTACATGT+CGG - Chr2:882496-882515 MsG0280006360.01.T01:intron 40.0%
!! TTTATCATTTTGGCCAAGCC+AGG + Chr2:882274-882293 None:intergenic 40.0%
!!! GAACGCTGTTTTGAAAGAAG+TGG - Chr2:881003-881022 MsG0280006360.01.T01:CDS 40.0%
!!! TTTGTTTTACCGACACCAGT+TGG + Chr2:882431-882450 None:intergenic 40.0%
ACAACGGTTTACGTTGATGC+TGG - Chr2:883532-883551 MsG0280006360.01.T01:CDS 45.0%
AGAGCTTGTCTTATCTCTGG+AGG - Chr2:882065-882084 MsG0280006360.01.T01:intron 45.0%
AGCCATTGAGGAAGTTTGCA+AGG - Chr2:883172-883191 MsG0280006360.01.T01:CDS 45.0%
AGCTGGCTAGGATGCTTATA+AGG - Chr2:883491-883510 MsG0280006360.01.T01:CDS 45.0%
AGGATACAGCACTTGAAAGG+AGG - Chr2:881173-881192 MsG0280006360.01.T01:intron 45.0%
AGGTATGTTGGACATGAGGA+CGG - Chr2:882817-882836 MsG0280006360.01.T01:CDS 45.0%
AGTGGAAGATGCTAAAGGGA+AGG - Chr2:881021-881040 MsG0280006360.01.T01:CDS 45.0%
CGGCTGCAACAACAATTGAA+CGG + Chr2:881302-881321 None:intergenic 45.0%
CTATGTACATGTCGGACTAC+TGG - Chr2:882504-882523 MsG0280006360.01.T01:intron 45.0%
CTCACTCTCTTCCTTTCCTT+TGG + Chr2:880343-880362 None:intergenic 45.0%
CTGCACCAGGGTAAGTTATT+AGG - Chr2:882558-882577 MsG0280006360.01.T01:intron 45.0%
GAACAAGGTAGTGTCAAAGC+TGG - Chr2:883474-883493 MsG0280006360.01.T01:CDS 45.0%
GAGGAACCAATTGGATATCG+AGG + Chr2:882396-882415 None:intergenic 45.0%
GCTGTAGTGAGATCTATAGC+TGG - Chr2:882360-882379 MsG0280006360.01.T01:CDS 45.0%
GGAAGACCTCGATATCCAAT+TGG - Chr2:882387-882406 MsG0280006360.01.T01:CDS 45.0%
GGCTAACAACCTCAGCTATT+TGG + Chr2:882230-882249 None:intergenic 45.0%
GGGAAACTTGATCCTGTTGT+CGG - Chr2:880759-880778 MsG0280006360.01.T01:CDS 45.0%
GTGCTAGACCAACTGAAAAG+TGG - Chr2:883446-883465 MsG0280006360.01.T01:intron 45.0%
GTGGATGTATTGGATGTGGA+TGG - Chr2:881404-881423 MsG0280006360.01.T01:CDS 45.0%
GTTGCATTCTCTTCCTGTTG+AGG + Chr2:881563-881582 None:intergenic 45.0%
TATTCCTATCCACTCAGCAC+CGG + Chr2:880969-880988 None:intergenic 45.0%
TCAACTTCATAGTCAGCCAG+AGG - Chr2:881527-881546 MsG0280006360.01.T01:CDS 45.0%
TCATCCGTATACCAGTCCAT+CGG + Chr2:882251-882270 None:intergenic 45.0%
TCCAGCAGAGTCAACAATTG+TGG + Chr2:883120-883139 None:intergenic 45.0%
TGACAACTTAGGAGACAAGC+TGG - Chr2:881969-881988 MsG0280006360.01.T01:intron 45.0%
TGCTCGCGATAAAGTAATGC+AGG - Chr2:883074-883093 MsG0280006360.01.T01:intron 45.0%
TTATGAGATGCTCGGATCCA+AGG + Chr2:883023-883042 None:intergenic 45.0%
TTTATCGCGAGCAACTTCCA+TGG + Chr2:883067-883086 None:intergenic 45.0%
! CAGCTTGAATGTAGCACTGA+TGG - Chr2:882168-882187 MsG0280006360.01.T01:intron 45.0%
! GAGATTTGGTTGAAGAGGCA+GGG - Chr2:880739-880758 MsG0280006360.01.T01:CDS 45.0%
! GTTGGCTCAGATGATAGGTA+AGG - Chr2:880883-880902 MsG0280006360.01.T01:CDS 45.0%
! TGGTCGAGATTTGGTTGAAG+AGG - Chr2:880734-880753 MsG0280006360.01.T01:CDS 45.0%
!! AAAGGGTTGGCTCAGATGAT+AGG - Chr2:880878-880897 MsG0280006360.01.T01:CDS 45.0%
!! AGTTGATGAGGCTTGTGCAA+GGG - Chr2:881497-881516 MsG0280006360.01.T01:CDS 45.0%
!! GCTTGAATGTAGCACTGATG+GGG - Chr2:882170-882189 MsG0280006360.01.T01:intron 45.0%
!! TAGTTGATGAGGCTTGTGCA+AGG - Chr2:881496-881515 MsG0280006360.01.T01:CDS 45.0%
!! TGAGAAAGGCATCACTTTGG+CGG - Chr2:883227-883246 MsG0280006360.01.T01:CDS 45.0%
!! TGCTGAGAAAGGCATCACTT+TGG - Chr2:883224-883243 MsG0280006360.01.T01:CDS 45.0%
!! TTAGCCGATGGACTGGTATA+CGG - Chr2:882244-882263 MsG0280006360.01.T01:intron 45.0%
AGGTAGTGTCAAAGCTGGCT+AGG - Chr2:883479-883498 MsG0280006360.01.T01:CDS 50.0%
ATGCTCGGATCCAAGGTTTG+AGG + Chr2:883016-883035 None:intergenic 50.0%
ATGCTGGTCCGAATGGAAGT+GGG - Chr2:883548-883567 MsG0280006360.01.T01:CDS 50.0%
CACCAGTTGGTCCAAGGAAT+AGG + Chr2:882418-882437 None:intergenic 50.0%
CAGTTGGTCCAAGGAATAGG+AGG + Chr2:882415-882434 None:intergenic 50.0%
CGGACCAAACCAAATAGCTG+AGG - Chr2:882218-882237 MsG0280006360.01.T01:intron 50.0%
CTCCTATTCCTTGGACCAAC+TGG - Chr2:882413-882432 MsG0280006360.01.T01:CDS 50.0%
CTTATAGGTGAGACGGGTGT+TGG - Chr2:880839-880858 MsG0280006360.01.T01:CDS 50.0%
GAAGCAGGAACGCAAAGCTT+TGG - Chr2:880704-880723 MsG0280006360.01.T01:CDS 50.0%
GGATCCGAGCATCTCATAAG+TGG - Chr2:883024-883043 MsG0280006360.01.T01:CDS 50.0%
TACGTTGATGCTGGTCCGAA+TGG - Chr2:883541-883560 MsG0280006360.01.T01:CDS 50.0%
TAGCTGAGGTTGTTAGCCGA+TGG - Chr2:882232-882251 MsG0280006360.01.T01:intron 50.0%
TATGTTGGACATGAGGACGG+TGG - Chr2:882820-882839 MsG0280006360.01.T01:CDS 50.0%
TCTTCATCACGTCCGACAAC+AGG + Chr2:880774-880793 None:intergenic 50.0%
TTCCTTGGACCAACTGGTGT+CGG - Chr2:882419-882438 MsG0280006360.01.T01:CDS 50.0%
! CATTAGTTTCCGGTGCTGAG+TGG - Chr2:880957-880976 MsG0280006360.01.T01:CDS 50.0%
! CGAGATTTGGTTGAAGAGGC+AGG - Chr2:880738-880757 MsG0280006360.01.T01:CDS 50.0%
! GCTTGTCTTATCTCTGGAGG+AGG - Chr2:882068-882087 MsG0280006360.01.T01:intron 50.0%
! TGATGGACAAGGCAGAACTG+TGG - Chr2:882963-882982 MsG0280006360.01.T01:CDS 50.0%
!! AGATTGATTGGTGCTGCACC+AGG - Chr2:882545-882564 MsG0280006360.01.T01:intron 50.0%
!! GATTGATTGGTGCTGCACCA+GGG - Chr2:882546-882565 MsG0280006360.01.T01:intron 50.0%
!! GCCACAATTGTTGACTCTGC+TGG - Chr2:883116-883135 MsG0280006360.01.T01:intron 50.0%
!! GGTTGATTGGACTTGGTGAC+AGG - Chr2:882298-882317 MsG0280006360.01.T01:CDS 50.0%
CTCAATGGCTCGCGAGAAAG+AGG + Chr2:883162-883181 None:intergenic 55.0%
CTCTTTCTCGCGAGCCATTG+AGG - Chr2:883160-883179 MsG0280006360.01.T01:CDS 55.0%
GAGGTTGTTAGCCGATGGAC+TGG - Chr2:882237-882256 MsG0280006360.01.T01:intron 55.0%
GATGCTGGTCCGAATGGAAG+TGG - Chr2:883547-883566 MsG0280006360.01.T01:CDS 55.0%
GGTATACGGATGACCTGGCT+TGG - Chr2:882258-882277 MsG0280006360.01.T01:intron 55.0%
TACCGACACCAGTTGGTCCA+AGG + Chr2:882424-882443 None:intergenic 55.0%
TGGTCCGAATGGAAGTGGGT+TGG - Chr2:883552-883571 MsG0280006360.01.T01:CDS 55.0%
! AGGGCGTCATCTTCCTGACA+AGG - Chr2:881464-881483 MsG0280006360.01.T01:intron 55.0%
! GGACTGGTATACGGATGACC+TGG - Chr2:882253-882272 MsG0280006360.01.T01:intron 55.0%
! GGGAGGCTAACTGATGGACA+AGG - Chr2:882952-882971 MsG0280006360.01.T01:CDS 55.0%
! GTTTCCGGTGCTGAGTGGAT+AGG - Chr2:880962-880981 MsG0280006360.01.T01:CDS 55.0%
! CTCTGGAGGAGGCTGACAGT+TGG - Chr2:882079-882098 MsG0280006360.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 880301 883624 880301 ID=MsG0280006360.01;Name=MsG0280006360.01
Chr2 mRNA 880301 883624 880301 ID=MsG0280006360.01.T01;Parent=MsG0280006360.01;Name=MsG0280006360.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0|0|1|1|1|9|0|719
Chr2 exon 883469 883624 883469 ID=MsG0280006360.01.T01:exon:985;Parent=MsG0280006360.01.T01
Chr2 exon 883142 883331 883142 ID=MsG0280006360.01.T01:exon:984;Parent=MsG0280006360.01.T01
Chr2 exon 882810 883079 882810 ID=MsG0280006360.01.T01:exon:983;Parent=MsG0280006360.01.T01
Chr2 exon 882580 882720 882580 ID=MsG0280006360.01.T01:exon:982;Parent=MsG0280006360.01.T01
Chr2 exon 882278 882459 882278 ID=MsG0280006360.01.T01:exon:981;Parent=MsG0280006360.01.T01
Chr2 exon 881485 881970 881485 ID=MsG0280006360.01.T01:exon:980;Parent=MsG0280006360.01.T01
Chr2 exon 881358 881428 881358 ID=MsG0280006360.01.T01:exon:979;Parent=MsG0280006360.01.T01
Chr2 exon 880629 881106 880629 ID=MsG0280006360.01.T01:exon:978;Parent=MsG0280006360.01.T01
Chr2 exon 880301 880486 880301 ID=MsG0280006360.01.T01:exon:977;Parent=MsG0280006360.01.T01
Chr2 CDS 883469 883624 883469 ID=MsG0280006360.01.T01:cds;Parent=MsG0280006360.01.T01
Chr2 CDS 883142 883331 883142 ID=MsG0280006360.01.T01:cds;Parent=MsG0280006360.01.T01
Chr2 CDS 882810 883079 882810 ID=MsG0280006360.01.T01:cds;Parent=MsG0280006360.01.T01
Chr2 CDS 882580 882720 882580 ID=MsG0280006360.01.T01:cds;Parent=MsG0280006360.01.T01
Chr2 CDS 882278 882459 882278 ID=MsG0280006360.01.T01:cds;Parent=MsG0280006360.01.T01
Chr2 CDS 881485 881970 881485 ID=MsG0280006360.01.T01:cds;Parent=MsG0280006360.01.T01
Chr2 CDS 881358 881428 881358 ID=MsG0280006360.01.T01:cds;Parent=MsG0280006360.01.T01
Chr2 CDS 880629 881106 880629 ID=MsG0280006360.01.T01:cds;Parent=MsG0280006360.01.T01
Chr2 CDS 880301 880486 880301 ID=MsG0280006360.01.T01:cds;Parent=MsG0280006360.01.T01
Gene Sequence

>MsG0280006360.01.T01

ATGAATCCTGCTGGTGTTAGAGTTCAATTTGATAGTCAGCCAAAGGAAAGGAAGAGAGTGAGAAATTTTTTCTTTGGGGAAAAAGACAGGAAGAGAGTGAAACTTCTTTCTTTGGGGAGAAAAGATGACAATGCTAGCAAAGCCCGTCTTGCAAATGTGCGGAAAGAAATTGACGACTTAAAAGACAAGCTTCTAAATGTGTGCAAAAGGATGAATATAGTAAATGTGTACAAAAAGATGTGTGCAAAAGGATGTGACAAAAACGTGAAGCAGGAACGCAAAGCTTTGGAAATTTATGGTCGAGATTTGGTTGAAGAGGCAGGGAAACTTGATCCTGTTGTCGGACGTGAGACGGGTGTTGGTAAAACAGCTGTTGTTAAAGGGTTGGCTCAGATGATAGGTAAGGGAAATGTTCCTTGTCTTGCTGAAGTTAAGTTAATTGCTTTGGATACGAGAGCATTAGTTTCCGGTGCTGAGTGGATAGGAATACTTATAGGGAGGTTGAACGCTGTTTTGAAAGAAGTGGAAGATGCTAAAGGGAAGGTTATTCTTTTCATTGATGAATTTCATCTTGTTCTTGATGCTGTTATTTTTTTGAAACCTATGTTTGATCGAGGTTTATGTTCTGAACCTAGTGTGTCTGATACTATTAGTATACTTCGTGGACTACAAGAGAAATATGAGGTTCGTCATGGTGTTAGAATTCAAGACCGTTCAATTGTTGTTGCAGCCGAGTTGTCTAGTCAGTACATATCTGGGCGTCATCTTCCTGACAAGGCAATTGATTTAGTTGATGAGGCTTGTGCAAGGGTTAAATTTCAACTTCATAGTCAGCCAGAGGAAATTGCTATCCTCAACAGGAAGAGAATGCAACTAGAAGTGCAACTTTATTCTTTGGAGAAAAGGGACGACAAAGATAGCAAAGCTCGTCTTGTTGATGTGCGGAAAGAACTTGACAACTTAGGAGACAAGCTGGAACATCTGAAGATGAAGTTTAGTAAAGAGAAAGAGAGGATTGATGAGATTCGAAGGCTGAAACAGATACGTGAAGAGCTTGTCTTATCTCTGGAGGAGGCTGACAGTTGGTATGATCTAGCAAGAGATTCAGACCTACGATATGGTGCAATTGATAAGGTGGAAAATGCAATAAAACAGCTTGAATGTAGCACTGATGGGGAGAACTTGATGTTGACAGACTCTGTCGGACCAAACCAAATAGCTGAGGTTGTTAGCCGATGGACTGGTATACGGATGACCTGGCTTGGCCAAAATGATAAAGAAAGGTTGATTGGACTTGGTGACAGGTTGCACAATATAGTTGTGGGACAAGACCAAGCAATAAATGCTGTAGTGAGATCTATAGCTGGTTTTGGAAGACCTCGATATCCAATTGGTTCCTCCTATTCCTTGGACCAACTGGTGTCGTTGGTGACTATGTACATGTCGGACTACTGGGAACAACACTCTGTGTCAAGATTGATTGGTGCTGCACCAGGGTATGTTGGACATGAGGACGGTGGACGATTAACTGAAGCTGTAAGGAGAAGGCCACACAGTGTGATACTTTTTGAGCAAGTGGAGAAAGCACATATATCTGTATTAAACACTCTGCTTGAAGTCTTAAATTATGGGAGGCTAACTGATGGACAAGGCAGAACTGTGGATTTTAGGAACACAGTCATTATCATGACCTCAAACCTTGGATCCGAGCATCTCATAAGTGGACTTTCAGGAAAATGTACCATGGAAGTTGCTCGCGATAAAGTAATGCAGGAAGTGAGAAAGCATTTCAGGCCACAATTGTTGACTCTGCTGGACGAAGTTGTTGTATTCGATCCTCTTTCTCGCGAGCCATTGAGGAAGTTTGCAAGGTTGCATATGAAGGATGTAGCTAATCGTTTTGCTGAGAAAGGCATCACTTTGGCGGTAACAGATGCAGCACTAGATTTTATACTTGCTGAGAGCTATGATCCTGAGTATGGTGCTAGACCAACTGAAAAGTGGATTGAGAACAAGGTAGTGTCAAAGCTGGCTAGGATGCTTATAAGGAAAGAAATTGATGAGAATACAACGGTTTACGTTGATGCTGGTCCGAATGGAAGTGGGTTGGTATACCGTGTAGAAAATAATGAAGAGATTGTTAATGCTGAAACGGGGTGA

Protein sequence

>MsG0280006360.01.T01

MNPAGVRVQFDSQPKERKRVRNFFFGEKDRKRVKLLSLGRKDDNASKARLANVRKEIDDLKDKLLNVCKRMNIVNVYKKMCAKGCDKNVKQERKALEIYGRDLVEEAGKLDPVVGRETGVGKTAVVKGLAQMIGKGNVPCLAEVKLIALDTRALVSGAEWIGILIGRLNAVLKEVEDAKGKVILFIDEFHLVLDAVIFLKPMFDRGLCSEPSVSDTISILRGLQEKYEVRHGVRIQDRSIVVAAELSSQYISGRHLPDKAIDLVDEACARVKFQLHSQPEEIAILNRKRMQLEVQLYSLEKRDDKDSKARLVDVRKELDNLGDKLEHLKMKFSKEKERIDEIRRLKQIREELVLSLEEADSWYDLARDSDLRYGAIDKVENAIKQLECSTDGENLMLTDSVGPNQIAEVVSRWTGIRMTWLGQNDKERLIGLGDRLHNIVVGQDQAINAVVRSIAGFGRPRYPIGSSYSLDQLVSLVTMYMSDYWEQHSVSRLIGAAPGYVGHEDGGRLTEAVRRRPHSVILFEQVEKAHISVLNTLLEVLNYGRLTDGQGRTVDFRNTVIIMTSNLGSEHLISGLSGKCTMEVARDKVMQEVRKHFRPQLLTLLDEVVVFDPLSREPLRKFARLHMKDVANRFAEKGITLAVTDAALDFILAESYDPEYGARPTEKWIENKVVSKLARMLIRKEIDENTTVYVDAGPNGSGLVYRVENNEEIVNAETG*