Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009761.01.T01 | XP_013464347.3 | 96.19 | 210 | 8 | 0 | 1 | 210 | 1 | 210 | 3.60E-149 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009761.01.T01 | Q03666 | 74.038 | 208 | 53 | 1 | 3 | 209 | 4 | 211 | 2.36E-113 | 328 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009761.01.T01 | A0A396J8T0 | 96.190 | 210 | 8 | 0 | 1 | 210 | 1 | 210 | 1.72e-149 | 426 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047910.01 | MsG0280009761.01 | 0.817263 | 3.609902e-52 | 2.616250e-49 |
| MsG0080047945.01 | MsG0280009761.01 | 0.837878 | 4.008545e-57 | 5.278262e-54 |
| MsG0080047973.01 | MsG0280009761.01 | 0.833598 | 4.863869e-56 | 5.628146e-53 |
| MsG0080048068.01 | MsG0280009761.01 | 0.800075 | 1.708142e-48 | 7.880744e-46 |
| MsG0080048780.01 | MsG0280009761.01 | 0.800765 | 1.236040e-48 | 5.803112e-46 |
| MsG0080049078.01 | MsG0280009761.01 | 0.827321 | 1.668938e-54 | 1.605865e-51 |
| MsG0080049079.01 | MsG0280009761.01 | 0.808953 | 2.404128e-50 | 1.393288e-47 |
| MsG0080049080.01 | MsG0280009761.01 | 0.829100 | 6.218213e-55 | 6.301126e-52 |
| MsG0180000120.01 | MsG0280009761.01 | 0.824692 | 7.032496e-54 | 6.275782e-51 |
| MsG0180000671.01 | MsG0280009761.01 | 0.834093 | 3.657744e-56 | 4.295975e-53 |
| MsG0180000677.01 | MsG0280009761.01 | 0.818644 | 1.760208e-52 | 1.325037e-49 |
| MsG0180000878.01 | MsG0280009761.01 | 0.827045 | 1.942935e-54 | 1.854232e-51 |
| MsG0180001772.01 | MsG0280009761.01 | 0.833617 | 4.812925e-56 | 5.572095e-53 |
| MsG0180001880.01 | MsG0280009761.01 | 0.840179 | 1.016327e-57 | 1.436165e-54 |
| MsG0180003198.01 | MsG0280009761.01 | 0.844029 | 9.736233e-59 | 1.551957e-55 |
| MsG0180003933.01 | MsG0280009761.01 | 0.836753 | 7.779069e-57 | 9.896875e-54 |
| MsG0180004492.01 | MsG0280009761.01 | 0.821136 | 4.740685e-53 | 3.824658e-50 |
| MsG0180004542.01 | MsG0280009761.01 | 0.816511 | 5.325804e-52 | 3.781157e-49 |
| MsG0180004739.01 | MsG0280009761.01 | 0.801666 | 8.086127e-49 | 3.883812e-46 |
| MsG0180004987.01 | MsG0280009761.01 | 0.844743 | 6.257799e-59 | 1.020078e-55 |
| MsG0180005760.01 | MsG0280009761.01 | 0.803715 | 3.053724e-49 | 1.545500e-46 |
| MsG0180005879.01 | MsG0280009761.01 | 0.805561 | 1.257742e-49 | 6.675017e-47 |
| MsG0280006991.01 | MsG0280009761.01 | 0.813328 | 2.705614e-51 | 1.761603e-48 |
| MsG0280007102.01 | MsG0280009761.01 | 0.811435 | 7.010148e-51 | 4.339137e-48 |
| MsG0280007628.01 | MsG0280009761.01 | 0.822943 | 1.807246e-53 | 1.534534e-50 |
| MsG0280009443.01 | MsG0280009761.01 | 0.810804 | 9.605306e-51 | 5.846821e-48 |
| MsG0280009761.01 | MsG0280009863.01 | 0.823501 | 1.338930e-53 | 1.154959e-50 |
| MsG0280009761.01 | MsG0280010198.01 | 0.810637 | 1.044088e-50 | 6.326993e-48 |
| MsG0280009761.01 | MsG0280010417.01 | -0.802463 | 5.543952e-49 | 2.717432e-46 |
| MsG0280009761.01 | MsG0280010926.01 | 0.806964 | 6.368245e-50 | 3.503581e-47 |
| MsG0280009761.01 | MsG0280010974.01 | 0.805560 | 1.258486e-49 | 6.678831e-47 |
| MsG0280009761.01 | MsG0280011252.01 | 0.827774 | 1.299240e-54 | 1.266542e-51 |
| MsG0280009761.01 | MsG0380011495.01 | 0.800827 | 1.200565e-48 | 5.645520e-46 |
| MsG0280009761.01 | MsG0380012876.01 | 0.822848 | 1.901707e-53 | 1.610428e-50 |
| MsG0280009761.01 | MsG0380013530.01 | 0.807018 | 6.203646e-50 | 3.417782e-47 |
| MsG0280009761.01 | MsG0380013930.01 | 0.812176 | 4.836489e-51 | 3.053492e-48 |
| MsG0280009761.01 | MsG0380013955.01 | 0.800548 | 1.368513e-48 | 6.389947e-46 |
| MsG0280009761.01 | MsG0380013970.01 | 0.814972 | 1.173577e-51 | 7.988698e-49 |
| MsG0280009761.01 | MsG0380013992.01 | 0.841276 | 5.242718e-58 | 7.663936e-55 |
| MsG0280009761.01 | MsG0380013996.01 | 0.826942 | 2.056208e-54 | 1.956572e-51 |
| MsG0280009761.01 | MsG0380014007.01 | 0.805221 | 1.482032e-49 | 7.797053e-47 |
| MsG0280009761.01 | MsG0380014035.01 | 0.810721 | 1.001134e-50 | 6.080693e-48 |
| MsG0280009761.01 | MsG0380014037.01 | 0.816415 | 5.595594e-52 | 3.962363e-49 |
| MsG0280009761.01 | MsG0380014053.01 | 0.860641 | 1.793223e-63 | 4.935957e-60 |
| MsG0280009761.01 | MsG0380014560.01 | 0.805302 | 1.425352e-49 | 7.514501e-47 |
| MsG0280009761.01 | MsG0380014729.01 | 0.818658 | 1.747615e-52 | 1.316036e-49 |
| MsG0280009761.01 | MsG0380015546.01 | 0.817817 | 2.708521e-52 | 1.993145e-49 |
| MsG0280009761.01 | MsG0380015603.01 | 0.801112 | 1.050005e-48 | 4.973506e-46 |
| MsG0280009761.01 | MsG0380015733.01 | 0.829970 | 3.821592e-55 | 3.972233e-52 |
| MsG0280009761.01 | MsG0380015869.01 | 0.820569 | 6.400403e-53 | 5.082472e-50 |
| MsG0280009761.01 | MsG0380016137.01 | 0.827072 | 1.913967e-54 | 1.828114e-51 |
| MsG0280009761.01 | MsG0380016751.01 | 0.842925 | 1.919492e-58 | 2.954616e-55 |
| MsG0280009761.01 | MsG0380017100.01 | 0.805527 | 1.278572e-49 | 6.779633e-47 |
| MsG0280009761.01 | MsG0380017727.01 | 0.814479 | 1.508422e-51 | 1.013313e-48 |
| MsG0280009761.01 | MsG0380018027.01 | 0.846850 | 1.676282e-59 | 2.923821e-56 |
| MsG0280009761.01 | MsG0480018631.01 | 0.846359 | 2.282636e-59 | 3.918762e-56 |
| MsG0280009761.01 | MsG0480018905.01 | 0.836677 | 8.133751e-57 | 1.032381e-53 |
| MsG0280009761.01 | MsG0480020408.01 | 0.831201 | 1.909486e-55 | 2.057476e-52 |
| MsG0280009761.01 | MsG0480021254.01 | 0.811375 | 7.224260e-51 | 4.464509e-48 |
| MsG0280009761.01 | MsG0480021303.01 | 0.829547 | 4.841886e-55 | 4.971052e-52 |
| MsG0280009761.01 | MsG0480021315.01 | 0.819527 | 1.108089e-52 | 8.548811e-50 |
| MsG0280009761.01 | MsG0480021317.01 | 0.806419 | 8.301072e-50 | 4.503372e-47 |
| MsG0280009761.01 | MsG0480021521.01 | 0.806229 | 9.103839e-50 | 4.915342e-47 |
| MsG0280009761.01 | MsG0480021709.01 | 0.832863 | 7.417134e-56 | 8.395976e-53 |
| MsG0280009761.01 | MsG0480022286.01 | 0.848214 | 7.066618e-60 | 1.287343e-56 |
| MsG0280009761.01 | MsG0480022296.01 | 0.800006 | 1.764671e-48 | 8.127007e-46 |
| MsG0280009761.01 | MsG0480022804.01 | 0.811571 | 6.548975e-51 | 4.068096e-48 |
| MsG0280009761.01 | MsG0480023505.01 | 0.827429 | 1.571907e-54 | 1.517204e-51 |
| MsG0280009761.01 | MsG0480023590.01 | 0.832475 | 9.256714e-56 | 1.035772e-52 |
| MsG0280009761.01 | MsG0480023881.01 | 0.812735 | 3.650434e-51 | 2.339261e-48 |
| MsG0280009761.01 | MsG0580024327.01 | 0.803161 | 3.978687e-49 | 1.985209e-46 |
| MsG0280009761.01 | MsG0580024982.01 | 0.847630 | 1.024300e-59 | 1.831788e-56 |
| MsG0280009761.01 | MsG0580025738.01 | 0.814653 | 1.380980e-51 | 9.320112e-49 |
| MsG0280009761.01 | MsG0580025992.01 | 0.805998 | 1.018087e-49 | 5.464523e-47 |
| MsG0280009761.01 | MsG0580025997.01 | 0.819658 | 1.034556e-52 | 8.010328e-50 |
| MsG0280009761.01 | MsG0580027458.01 | 0.811614 | 6.410586e-51 | 3.986514e-48 |
| MsG0280009761.01 | MsG0580027983.01 | 0.844294 | 8.264801e-59 | 1.328261e-55 |
| MsG0280009761.01 | MsG0580028335.01 | 0.803576 | 3.263807e-49 | 1.646057e-46 |
| MsG0280009761.01 | MsG0580028713.01 | 0.804501 | 2.095441e-49 | 1.082129e-46 |
| MsG0280009761.01 | MsG0580028846.01 | 0.803190 | 3.923265e-49 | 1.959059e-46 |
| MsG0280009761.01 | MsG0580028853.01 | 0.803604 | 3.220861e-49 | 1.625510e-46 |
| MsG0280009761.01 | MsG0580029354.01 | 0.806705 | 7.225528e-50 | 3.948593e-47 |
| MsG0280009761.01 | MsG0680030776.01 | 0.801816 | 7.531501e-49 | 3.631382e-46 |
| MsG0280009761.01 | MsG0680032055.01 | 0.810919 | 9.073106e-51 | 5.540188e-48 |
| MsG0280009761.01 | MsG0680032238.01 | 0.808052 | 3.743697e-50 | 2.118847e-47 |
| MsG0280009761.01 | MsG0680032515.01 | 0.836792 | 7.601327e-57 | 9.682323e-54 |
| MsG0280009761.01 | MsG0680034419.01 | 0.809154 | 2.176737e-50 | 1.268406e-47 |
| MsG0280009761.01 | MsG0780038571.01 | 0.854433 | 1.235331e-61 | 2.758347e-58 |
| MsG0280009761.01 | MsG0780039596.01 | 0.815433 | 9.268819e-52 | 6.389533e-49 |
| MsG0280009761.01 | MsG0780039707.01 | 0.868044 | 8.744858e-66 | 3.118719e-62 |
| MsG0280009761.01 | MsG0780039859.01 | 0.802704 | 4.945064e-49 | 2.438844e-46 |
| MsG0280009761.01 | MsG0780040061.01 | 0.812015 | 5.243570e-51 | 3.295970e-48 |
| MsG0280009761.01 | MsG0780040315.01 | 0.844116 | 9.228158e-59 | 1.474947e-55 |
| MsG0280009761.01 | MsG0780040567.01 | 0.833248 | 5.948514e-56 | 6.811620e-53 |
| MsG0280009761.01 | MsG0780041249.01 | 0.803119 | 4.058208e-49 | 2.022645e-46 |
| MsG0280009761.01 | MsG0880042006.01 | 0.830040 | 3.673352e-55 | 3.825836e-52 |
| MsG0280009761.01 | MsG0880042894.01 | 0.819951 | 8.870083e-53 | 6.924351e-50 |
| MsG0280009761.01 | MsG0880043032.01 | 0.808838 | 2.543476e-50 | 1.469538e-47 |
| MsG0280009761.01 | MsG0880043075.01 | 0.831138 | 1.977959e-55 | 2.127368e-52 |
| MsG0280009761.01 | MsG0880044228.01 | 0.810239 | 1.272514e-50 | 7.630389e-48 |
| MsG0280009761.01 | MsG0880044312.01 | 0.818032 | 2.421490e-52 | 1.792357e-49 |
| MsG0280009761.01 | MsG0880044314.01 | 0.859633 | 3.614991e-63 | 9.611073e-60 |
| MsG0280009761.01 | MsG0880045252.01 | 0.817117 | 3.893229e-52 | 2.810393e-49 |
| MsG0280009761.01 | MsG0880045361.01 | 0.805979 | 1.027445e-49 | 5.512015e-47 |
| MsG0280009761.01 | MsG0880045412.01 | 0.817321 | 3.504073e-52 | 2.543611e-49 |
| MsG0280009761.01 | MsG0880046675.01 | 0.822353 | 2.479431e-53 | 2.070335e-50 |
| MsG0280009761.01 | MsG0880046791.01 | 0.800975 | 1.120044e-48 | 5.287056e-46 |
| MsG0280009761.01 | MsG0880046866.01 | 0.845365 | 4.251235e-59 | 7.067726e-56 |
| MsG0280009761.01 | MsG0880046956.01 | 0.804804 | 1.811832e-49 | 9.431032e-47 |
| MsG0280009761.01 | MsG0880047567.01 | 0.821759 | 3.403333e-53 | 2.793877e-50 |
| MsG0280009761.01 | MsG0880047605.01 | 0.811768 | 5.935291e-51 | 3.706064e-48 |
| MsG0280009761.01 | MsG0880047670.01 | 0.800828 | 1.200115e-48 | 5.643510e-46 |
| MsG0280009761.01 | MsG0880047719.01 | 0.817435 | 3.302003e-52 | 2.404585e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009761.01.T01 | MTR_2g070150 | 93.627 | 204 | 13 | 0 | 1 | 204 | 1 | 204 | 9.21e-145 | 405 |
| MsG0280009761.01.T01 | MTR_2g070180 | 82.488 | 217 | 38 | 0 | 1 | 217 | 1 | 217 | 2.09e-137 | 387 |
| MsG0280009761.01.T01 | MTR_2g070140 | 94.330 | 194 | 11 | 0 | 17 | 210 | 1 | 194 | 2.85e-137 | 386 |
| MsG0280009761.01.T01 | MTR_2g070130 | 77.619 | 210 | 47 | 0 | 1 | 210 | 1 | 210 | 4.42e-128 | 363 |
| MsG0280009761.01.T01 | MTR_2g070210 | 76.887 | 212 | 47 | 1 | 1 | 210 | 1 | 212 | 7.22e-123 | 350 |
| MsG0280009761.01.T01 | MTR_2g070200 | 72.512 | 211 | 56 | 2 | 1 | 209 | 1 | 211 | 2.77e-114 | 328 |
| MsG0280009761.01.T01 | MTR_2g070060 | 66.190 | 210 | 71 | 0 | 1 | 210 | 1 | 210 | 2.29e-106 | 308 |
| MsG0280009761.01.T01 | MTR_3g467420 | 65.049 | 206 | 72 | 0 | 5 | 210 | 10 | 215 | 1.74e-102 | 298 |
| MsG0280009761.01.T01 | MTR_2g070070 | 65.714 | 210 | 72 | 0 | 1 | 210 | 1 | 210 | 5.89e-102 | 297 |
| MsG0280009761.01.T01 | MTR_3g467430 | 61.538 | 208 | 80 | 0 | 3 | 210 | 8 | 215 | 7.80e-98 | 286 |
| MsG0280009761.01.T01 | MTR_8g056940 | 64.762 | 210 | 74 | 0 | 1 | 210 | 1 | 210 | 1.02e-97 | 286 |
| MsG0280009761.01.T01 | MTR_2g070110 | 63.333 | 210 | 76 | 1 | 1 | 210 | 1 | 209 | 5.92e-96 | 281 |
| MsG0280009761.01.T01 | MTR_2g070120 | 62.201 | 209 | 79 | 0 | 1 | 209 | 1 | 209 | 3.19e-93 | 275 |
| MsG0280009761.01.T01 | MTR_2g070120 | 68.966 | 58 | 14 | 2 | 210 | 263 | 106 | 163 | 5.65e-16 | 75.5 |
| MsG0280009761.01.T01 | MTR_4g124130 | 59.048 | 210 | 85 | 1 | 1 | 209 | 1 | 210 | 5.78e-90 | 266 |
| MsG0280009761.01.T01 | MTR_5g076900 | 52.133 | 211 | 99 | 2 | 2 | 211 | 4 | 213 | 7.75e-78 | 236 |
| MsG0280009761.01.T01 | MTR_0186s0030 | 66.667 | 141 | 47 | 0 | 1 | 141 | 1 | 141 | 3.42e-63 | 196 |
| MsG0280009761.01.T01 | MTR_1g090060 | 44.762 | 210 | 111 | 3 | 4 | 209 | 3 | 211 | 3.94e-55 | 178 |
| MsG0280009761.01.T01 | MTR_8g087425 | 42.718 | 206 | 115 | 2 | 2 | 205 | 3 | 207 | 1.91e-50 | 166 |
| MsG0280009761.01.T01 | MTR_4g059730 | 42.056 | 214 | 117 | 4 | 1 | 209 | 1 | 212 | 1.03e-49 | 164 |
| MsG0280009761.01.T01 | MTR_7g065740 | 44.340 | 212 | 110 | 5 | 3 | 209 | 6 | 214 | 1.10e-49 | 164 |
| MsG0280009761.01.T01 | MTR_4g019790 | 43.062 | 209 | 114 | 4 | 4 | 209 | 7 | 213 | 1.08e-48 | 161 |
| MsG0280009761.01.T01 | MTR_1g090100 | 44.712 | 208 | 110 | 3 | 5 | 208 | 3 | 209 | 4.04e-48 | 160 |
| MsG0280009761.01.T01 | MTR_7g065720 | 42.453 | 212 | 114 | 6 | 3 | 209 | 6 | 214 | 4.53e-48 | 160 |
| MsG0280009761.01.T01 | MTR_7g065750 | 43.062 | 209 | 113 | 5 | 3 | 207 | 6 | 212 | 7.74e-48 | 159 |
| MsG0280009761.01.T01 | MTR_7g065660 | 40.476 | 210 | 120 | 4 | 3 | 209 | 6 | 213 | 4.30e-47 | 157 |
| MsG0280009761.01.T01 | MTR_3g099757 | 40.488 | 205 | 119 | 2 | 3 | 205 | 4 | 207 | 4.47e-47 | 157 |
| MsG0280009761.01.T01 | MTR_5g037380 | 41.014 | 217 | 119 | 5 | 3 | 210 | 4 | 220 | 7.13e-47 | 157 |
| MsG0280009761.01.T01 | MTR_4g019780 | 38.756 | 209 | 125 | 2 | 3 | 209 | 7 | 214 | 4.28e-46 | 154 |
| MsG0280009761.01.T01 | MTR_5g040430 | 36.493 | 211 | 127 | 2 | 2 | 205 | 5 | 215 | 4.83e-46 | 154 |
| MsG0280009761.01.T01 | MTR_8g087410 | 41.667 | 204 | 116 | 2 | 4 | 205 | 6 | 208 | 8.82e-46 | 154 |
| MsG0280009761.01.T01 | MTR_1g090070 | 39.810 | 211 | 121 | 4 | 4 | 209 | 9 | 218 | 1.90e-45 | 153 |
| MsG0280009761.01.T01 | MTR_7g065630 | 39.713 | 209 | 117 | 5 | 3 | 208 | 24 | 226 | 1.84e-44 | 151 |
| MsG0280009761.01.T01 | MTR_7g065270 | 40.191 | 209 | 120 | 5 | 3 | 208 | 6 | 212 | 2.50e-44 | 150 |
| MsG0280009761.01.T01 | MTR_7g065710 | 40.476 | 210 | 120 | 5 | 1 | 209 | 1 | 206 | 1.56e-43 | 148 |
| MsG0280009761.01.T01 | MTR_1g090090 | 42.105 | 209 | 116 | 4 | 4 | 208 | 3 | 210 | 3.45e-43 | 147 |
| MsG0280009761.01.T01 | MTR_7g065590 | 37.143 | 210 | 127 | 4 | 3 | 209 | 6 | 213 | 1.07e-42 | 146 |
| MsG0280009761.01.T01 | MTR_6g080440 | 37.864 | 206 | 121 | 4 | 18 | 220 | 17 | 218 | 1.40e-42 | 145 |
| MsG0280009761.01.T01 | MTR_1g090150 | 38.756 | 209 | 114 | 6 | 3 | 203 | 2 | 204 | 1.56e-42 | 145 |
| MsG0280009761.01.T01 | MTR_8g061950 | 37.736 | 212 | 123 | 3 | 3 | 205 | 4 | 215 | 1.76e-42 | 145 |
| MsG0280009761.01.T01 | MTR_7g065600 | 39.151 | 212 | 121 | 5 | 3 | 211 | 6 | 212 | 8.92e-42 | 144 |
| MsG0280009761.01.T01 | MTR_7g065290 | 39.713 | 209 | 121 | 5 | 3 | 208 | 6 | 212 | 9.11e-42 | 144 |
| MsG0280009761.01.T01 | MTR_7g065265 | 38.756 | 209 | 123 | 5 | 3 | 208 | 6 | 212 | 7.04e-41 | 141 |
| MsG0280009761.01.T01 | MTR_7g065700 | 41.429 | 210 | 118 | 5 | 1 | 209 | 4 | 209 | 1.05e-40 | 141 |
| MsG0280009761.01.T01 | MTR_1g115195 | 39.336 | 211 | 119 | 5 | 1 | 205 | 1 | 208 | 2.34e-40 | 140 |
| MsG0280009761.01.T01 | MTR_7g065680 | 40.000 | 210 | 117 | 5 | 3 | 209 | 6 | 209 | 5.51e-40 | 139 |
| MsG0280009761.01.T01 | MTR_7g065230 | 38.462 | 208 | 120 | 5 | 3 | 208 | 6 | 207 | 7.35e-40 | 138 |
| MsG0280009761.01.T01 | MTR_7g065640 | 37.500 | 208 | 111 | 4 | 3 | 209 | 6 | 195 | 1.86e-39 | 137 |
| MsG0280009761.01.T01 | MTR_7g065260 | 39.362 | 188 | 109 | 5 | 3 | 187 | 13 | 198 | 8.17e-34 | 123 |
| MsG0280009761.01.T01 | MTR_2g072120 | 66.216 | 74 | 24 | 1 | 47 | 119 | 1 | 74 | 1.36e-30 | 110 |
| MsG0280009761.01.T01 | MTR_4g134370 | 29.714 | 175 | 96 | 5 | 4 | 159 | 15 | 181 | 1.08e-13 | 69.3 |
| MsG0280009761.01.T01 | MTR_4g134380 | 30.409 | 171 | 100 | 5 | 4 | 159 | 15 | 181 | 4.33e-13 | 67.4 |
| MsG0280009761.01.T01 | MTR_4g134380 | 30.303 | 165 | 96 | 5 | 4 | 153 | 15 | 175 | 5.99e-12 | 63.5 |
| MsG0280009761.01.T01 | MTR_4g043640 | 41.176 | 68 | 33 | 1 | 129 | 189 | 18 | 85 | 7.25e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009761.01.T01 | AT1G78380 | 67.464 | 209 | 68 | 0 | 1 | 209 | 1 | 209 | 2.67e-106 | 308 |
| MsG0280009761.01.T01 | AT1G17180 | 64.593 | 209 | 74 | 0 | 1 | 209 | 1 | 209 | 8.21e-105 | 304 |
| MsG0280009761.01.T01 | AT1G78370 | 65.385 | 208 | 72 | 0 | 1 | 208 | 1 | 208 | 6.33e-103 | 299 |
| MsG0280009761.01.T01 | AT1G78340 | 63.942 | 208 | 75 | 0 | 1 | 208 | 1 | 208 | 9.60e-103 | 299 |
| MsG0280009761.01.T01 | AT1G78320 | 65.366 | 205 | 71 | 0 | 1 | 205 | 1 | 205 | 1.22e-100 | 294 |
| MsG0280009761.01.T01 | AT1G17170 | 62.679 | 209 | 77 | 1 | 1 | 209 | 1 | 208 | 2.45e-100 | 293 |
| MsG0280009761.01.T01 | AT1G78360 | 63.507 | 211 | 76 | 1 | 1 | 210 | 1 | 211 | 4.54e-99 | 290 |
| MsG0280009761.01.T01 | AT1G17190 | 58.621 | 203 | 84 | 0 | 3 | 205 | 4 | 206 | 3.75e-90 | 267 |
| MsG0280009761.01.T01 | AT1G53680 | 57.282 | 206 | 86 | 2 | 3 | 206 | 6 | 211 | 1.09e-88 | 263 |
| MsG0280009761.01.T01 | AT3G43800 | 54.808 | 208 | 90 | 3 | 3 | 206 | 4 | 211 | 4.11e-79 | 239 |
| MsG0280009761.01.T01 | AT1G78320 | 56.098 | 205 | 63 | 1 | 1 | 205 | 1 | 178 | 8.90e-79 | 237 |
| MsG0280009761.01.T01 | AT2G29420 | 41.463 | 205 | 117 | 2 | 2 | 204 | 7 | 210 | 9.42e-54 | 174 |
| MsG0280009761.01.T01 | AT2G29450 | 45.794 | 214 | 109 | 5 | 3 | 211 | 5 | 216 | 1.73e-51 | 169 |
| MsG0280009761.01.T01 | AT3G09270 | 40.758 | 211 | 120 | 4 | 3 | 209 | 5 | 214 | 1.89e-50 | 166 |
| MsG0280009761.01.T01 | AT2G29440 | 44.175 | 206 | 109 | 4 | 3 | 204 | 5 | 208 | 1.15e-49 | 164 |
| MsG0280009761.01.T01 | AT2G29490 | 41.262 | 206 | 115 | 4 | 3 | 204 | 6 | 209 | 8.51e-49 | 162 |
| MsG0280009761.01.T01 | AT1G10360 | 41.860 | 215 | 117 | 4 | 2 | 208 | 3 | 217 | 1.40e-47 | 159 |
| MsG0280009761.01.T01 | AT2G29480 | 40.291 | 206 | 117 | 4 | 3 | 204 | 6 | 209 | 7.79e-47 | 157 |
| MsG0280009761.01.T01 | AT2G29460 | 38.835 | 206 | 120 | 4 | 3 | 204 | 6 | 209 | 1.75e-45 | 153 |
| MsG0280009761.01.T01 | AT1G59700 | 41.667 | 216 | 117 | 5 | 3 | 209 | 5 | 220 | 3.10e-45 | 153 |
| MsG0280009761.01.T01 | AT2G29470 | 40.000 | 205 | 116 | 5 | 5 | 204 | 8 | 210 | 8.27e-45 | 151 |
| MsG0280009761.01.T01 | AT1G59670 | 43.318 | 217 | 112 | 5 | 3 | 209 | 5 | 220 | 1.39e-44 | 151 |
| MsG0280009761.01.T01 | AT1G10370 | 39.535 | 215 | 122 | 4 | 2 | 208 | 3 | 217 | 2.16e-44 | 150 |
| MsG0280009761.01.T01 | AT1G74590 | 34.722 | 216 | 127 | 3 | 4 | 209 | 7 | 218 | 4.35e-43 | 147 |
| MsG0280009761.01.T01 | AT1G27130 | 36.744 | 215 | 127 | 4 | 3 | 208 | 5 | 219 | 1.00e-40 | 141 |
| MsG0280009761.01.T01 | AT5G62480 | 40.113 | 177 | 96 | 2 | 1 | 168 | 5 | 180 | 1.33e-39 | 138 |
| MsG0280009761.01.T01 | AT1G69930 | 37.441 | 211 | 125 | 3 | 5 | 208 | 13 | 223 | 2.08e-39 | 138 |
| MsG0280009761.01.T01 | AT1G27140 | 39.906 | 213 | 118 | 4 | 3 | 205 | 5 | 217 | 3.41e-39 | 137 |
| MsG0280009761.01.T01 | AT1G69920 | 37.500 | 208 | 115 | 5 | 5 | 200 | 35 | 239 | 6.95e-37 | 132 |
| MsG0280009761.01.T01 | AT5G62480 | 32.203 | 177 | 84 | 3 | 1 | 168 | 5 | 154 | 3.17e-23 | 95.1 |
| MsG0280009761.01.T01 | AT5G62480 | 32.203 | 177 | 83 | 3 | 1 | 168 | 5 | 153 | 3.59e-23 | 94.7 |
Find 62 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTCTACACTTGGTTTAA+AGG | 0.105597 | 2:-57670578 | MsG0280009761.01.T01:CDS |
| AGAGATCACAAGCTAGATTT+TGG | 0.158738 | 2:-57671560 | MsG0280009761.01.T01:CDS |
| TTGGGTAACAAACCTTATTT+TGG | 0.236498 | 2:-57669620 | MsG0280009761.01.T01:CDS |
| GTGAAATAGATCTATGAAAT+TGG | 0.256148 | 2:-57670746 | MsG0280009761.01.T01:intron |
| TTCAGTATATTGATGAAGTT+TGG | 0.281776 | 2:-57671620 | MsG0280009761.01.T01:CDS |
| ATGAAATAGATATATGATAA+TGG | 0.283746 | 2:-57669722 | MsG0280009761.01.T01:intron |
| TACTTTGGAGGAGACAAAAT+TGG | 0.303292 | 2:-57670623 | MsG0280009761.01.T01:CDS |
| AAGTTGTTTCCACCAAAATA+AGG | 0.329405 | 2:+57669608 | None:intergenic |
| AAGTGATTCTGCTAGATTAC+TGG | 0.343179 | 2:-57671821 | MsG0280009761.01.T01:CDS |
| ATGAAATTGGAAAGAACCTT+TGG | 0.349218 | 2:-57670733 | MsG0280009761.01.T01:CDS |
| CTCAACCTGCATGCATCTCT+TGG | 0.377767 | 2:+57670496 | None:intergenic |
| TTTCCATTATGAATGAGAAC+AGG | 0.382184 | 2:+57671669 | None:intergenic |
| ATCCCTGTTCTCATTCATAA+TGG | 0.385871 | 2:-57671672 | MsG0280009761.01.T01:CDS |
| CAGAATTGCCCTAGCTGAAA+AGG | 0.386828 | 2:-57671775 | MsG0280009761.01.T01:CDS |
| GCAATTAAAGATTCACAGAT+TGG | 0.390407 | 2:+57671645 | None:intergenic |
| CACTTATTCCATTCTACACT+TGG | 0.395366 | 2:-57670586 | MsG0280009761.01.T01:CDS |
| TGGAAACAACTTTGGCTTTG+TGG | 0.408185 | 2:-57669597 | MsG0280009761.01.T01:CDS |
| CAACTTTGGCTTTGTGGATG+TGG | 0.418409 | 2:-57669591 | MsG0280009761.01.T01:CDS |
| GATTACTGGGCAAGTCCATT+TGG | 0.423782 | 2:-57671807 | MsG0280009761.01.T01:CDS |
| CCATACACCTTATCTTGATC+AGG | 0.427123 | 2:+57670455 | None:intergenic |
| GGCTGATTATGTTGATAAGA+AGG | 0.427339 | 2:-57671538 | MsG0280009761.01.T01:intron |
| TTTAAAGGCTATGAGACCTT+TGG | 0.432290 | 2:-57670563 | MsG0280009761.01.T01:CDS |
| AGATAAGGTGTATGGCTTCA+TGG | 0.436683 | 2:-57670447 | MsG0280009761.01.T01:intron |
| TTGGCCCAAGCAATGAACTT+AGG | 0.437475 | 2:+57670515 | None:intergenic |
| CTGGGAGACAAGACTTACTT+TGG | 0.447631 | 2:-57670638 | MsG0280009761.01.T01:CDS |
| CGTAGAAGCTCATAGATTGT+TGG | 0.452212 | 2:-57670669 | MsG0280009761.01.T01:CDS |
| TAGATTGTTGGAGCAAGAGC+TGG | 0.455234 | 2:-57670657 | MsG0280009761.01.T01:CDS |
| TGAAATAGATATATGATAAT+GGG | 0.461125 | 2:-57669721 | MsG0280009761.01.T01:intron |
| TGGCCCAAGCAATGAACTTA+GGG | 0.464217 | 2:+57670516 | None:intergenic |
| ATGCCCTAAGTTCATTGCTT+GGG | 0.465024 | 2:-57670519 | MsG0280009761.01.T01:CDS |
| CTAGCTTGTGATCTCTGATA+AGG | 0.467136 | 2:+57671567 | None:intergenic |
| AATGCCCTAAGTTCATTGCT+TGG | 0.469149 | 2:-57670520 | MsG0280009761.01.T01:CDS |
| AGAACAAGAAGCTGCGAAGA+AGG | 0.470283 | 2:-57670696 | MsG0280009761.01.T01:CDS |
| AAGAACCTTTGGACCAGAAA+AGG | 0.491905 | 2:-57670722 | MsG0280009761.01.T01:CDS |
| TGAAGTGTTGGAAGAACAGT+TGG | 0.498731 | 2:-57669639 | MsG0280009761.01.T01:CDS |
| CCTTTAAACCAAGTGTAGAA+TGG | 0.500913 | 2:+57670578 | None:intergenic |
| ATTCTGACCCTCATGCCAAA+TGG | 0.501493 | 2:+57671792 | None:intergenic |
| AATGGGTTGAAGTATACAAA+AGG | 0.505859 | 2:-57669704 | MsG0280009761.01.T01:CDS |
| CCTGATCAAGATAAGGTGTA+TGG | 0.506244 | 2:-57670455 | MsG0280009761.01.T01:CDS |
| GGAGACAAGACTTACTTTGG+AGG | 0.510834 | 2:-57670635 | MsG0280009761.01.T01:CDS |
| GGTTCATTTGAAGTAACAAA+GGG | 0.524302 | 2:+57671709 | None:intergenic |
| GGCAAGTCCATTTGGCATGA+GGG | 0.542919 | 2:-57671799 | MsG0280009761.01.T01:CDS |
| CTCTACATTGATGTTGCCAA+AGG | 0.546992 | 2:+57670547 | None:intergenic |
| AGAATTGCCCTAGCTGAAAA+GGG | 0.551173 | 2:-57671774 | MsG0280009761.01.T01:CDS |
| AGTGATTCTGCTAGATTACT+GGG | 0.559493 | 2:-57671820 | MsG0280009761.01.T01:CDS |
| GCTTGATGTCACTGAAGTGT+TGG | 0.566834 | 2:-57669651 | MsG0280009761.01.T01:CDS |
| GTCGGTCCCTGATCAAGATA+AGG | 0.571607 | 2:-57670462 | MsG0280009761.01.T01:CDS |
| TGGCAACATCAATGTAGAGA+AGG | 0.574601 | 2:-57670543 | MsG0280009761.01.T01:CDS |
| GGGTTCATTTGAAGTAACAA+AGG | 0.580169 | 2:+57671708 | None:intergenic |
| CAGAATCACTTCATCAGCCA+TGG | 0.584359 | 2:+57671833 | None:intergenic |
| GGTTGAGAGTGTTTCCAAGT+CGG | 0.584489 | 2:-57670480 | MsG0280009761.01.T01:CDS |
| GGGCAAGTCCATTTGGCATG+AGG | 0.587485 | 2:-57671800 | MsG0280009761.01.T01:CDS |
| TTGGGCCAAGAGATGCATGC+AGG | 0.591022 | 2:-57670501 | MsG0280009761.01.T01:CDS |
| GATCTCTGATAAGGATCAGA+AGG | 0.596783 | 2:+57671576 | None:intergenic |
| TTCCATTATGAATGAGAACA+GGG | 0.600232 | 2:+57671670 | None:intergenic |
| AGATTGTTGGAGCAAGAGCT+GGG | 0.600824 | 2:-57670656 | MsG0280009761.01.T01:CDS |
| TAAGGATCAGAAGGCAACAA+AGG | 0.613337 | 2:+57671585 | None:intergenic |
| ATCTTGATCAGGGACCGACT+TGG | 0.617812 | 2:+57670466 | None:intergenic |
| GTGTAGAACATGCAAAACAA+TGG | 0.624108 | 2:+57669561 | None:intergenic |
| CATACACCTTATCTTGATCA+GGG | 0.625348 | 2:+57670456 | None:intergenic |
| GAACATGCAAAACAATGGAA+CGG | 0.661260 | 2:+57669566 | None:intergenic |
| GAAGTGTTGGAAGAACAGTT+GGG | 0.669003 | 2:-57669638 | MsG0280009761.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTTATATAAACTATAAG+TGG | + | Chr2:57670275-57670294 | None:intergenic | 15.0% |
| !! | AGAATAAAATTTCATCAAAA+AGG | + | Chr2:57669913-57669932 | None:intergenic | 15.0% |
| !! | ATGAAATAGATATATGATAA+TGG | - | Chr2:57671614-57671633 | MsG0280009761.01.T01:CDS | 15.0% |
| !! | GGAATAATTATGTAATAAAA+AGG | - | Chr2:57671124-57671143 | MsG0280009761.01.T01:intron | 15.0% |
| !! | TGAAATAGATATATGATAAT+GGG | - | Chr2:57671615-57671634 | MsG0280009761.01.T01:CDS | 15.0% |
| !! | TTATCTTTATGACAAAATTT+AGG | - | Chr2:57671363-57671382 | MsG0280009761.01.T01:intron | 15.0% |
| !!! | ACTAAATATTGTTGAATTTT+GGG | - | Chr2:57671287-57671306 | MsG0280009761.01.T01:intron | 15.0% |
| !!! | CATATAATTGATTCATATTA+AGG | + | Chr2:57670416-57670435 | None:intergenic | 15.0% |
| !!! | TATTTTGAACAATTTATTAG+AGG | - | Chr2:57670114-57670133 | MsG0280009761.01.T01:intron | 15.0% |
| !! | AATAACTTAATAGCTTAGTT+AGG | + | Chr2:57670379-57670398 | None:intergenic | 20.0% |
| !! | TAAGTTATTTATCCAAACAA+GGG | - | Chr2:57670390-57670409 | MsG0280009761.01.T01:intron | 20.0% |
| !! | TTAAGTTATTTATCCAAACA+AGG | - | Chr2:57670389-57670408 | MsG0280009761.01.T01:intron | 20.0% |
| !!! | GACTAAATATTGTTGAATTT+TGG | - | Chr2:57671286-57671305 | MsG0280009761.01.T01:intron | 20.0% |
| !!! | GTTTTTTCATGAGAAAATAT+AGG | - | Chr2:57670036-57670055 | MsG0280009761.01.T01:intron | 20.0% |
| !!! | TATAGCTTTTATTAAAATCG+CGG | - | Chr2:57671016-57671035 | MsG0280009761.01.T01:intron | 20.0% |
| !!! | TCATTTAAAATGCACTTTTT+TGG | + | Chr2:57671484-57671503 | None:intergenic | 20.0% |
| ! | ACATAATTATTCCATCAGAA+AGG | + | Chr2:57671117-57671136 | None:intergenic | 25.0% |
| ! | ACATGTAATGAATCATACAA+AGG | + | Chr2:57669841-57669860 | None:intergenic | 25.0% |
| ! | AGCAAAAAGAAGAAGATTTA+AGG | - | Chr2:57669596-57669615 | MsG0280009761.01.T01:CDS | 25.0% |
| ! | ATTTCATCAAAAAGGACAAA+AGG | + | Chr2:57669905-57669924 | None:intergenic | 25.0% |
| ! | ATTTGAAGATAGTTGAGATT+TGG | - | Chr2:57670445-57670464 | MsG0280009761.01.T01:intron | 25.0% |
| ! | CATGTAATGAATCATACAAA+GGG | + | Chr2:57669840-57669859 | None:intergenic | 25.0% |
| ! | GTGAAATAGATCTATGAAAT+TGG | - | Chr2:57670590-57670609 | MsG0280009761.01.T01:CDS | 25.0% |
| ! | TTCAGTATATTGATGAAGTT+TGG | - | Chr2:57669716-57669735 | MsG0280009761.01.T01:CDS | 25.0% |
| ! | TTGTCTATATCTTAAGTCTT+AGG | - | Chr2:57671534-57671553 | MsG0280009761.01.T01:intron | 25.0% |
| ! | TTTCATCAAAAAGGACAAAA+GGG | + | Chr2:57669904-57669923 | None:intergenic | 25.0% |
| ! | TTTCTCATGAAAAAACTTAC+AGG | + | Chr2:57670032-57670051 | None:intergenic | 25.0% |
| !! | GACAAATTTTAAATGTCAGT+TGG | + | Chr2:57671519-57671538 | None:intergenic | 25.0% |
| !! | GCTTAGAATTTGTTTATCAT+TGG | - | Chr2:57669869-57669888 | MsG0280009761.01.T01:intron | 25.0% |
| !! | TTTTGTCATAAAGATAACCA+TGG | + | Chr2:57671360-57671379 | None:intergenic | 25.0% |
| !!! | CTAATTGAAATGTGCTTTTT+CGG | - | Chr2:57670212-57670231 | MsG0280009761.01.T01:intron | 25.0% |
| !!! | TCATTTTCAGACATTAGTTT+TGG | + | Chr2:57671567-57671586 | None:intergenic | 25.0% |
| AACTTAATAGCTTAGTTAGG+TGG | + | Chr2:57670376-57670395 | None:intergenic | 30.0% | |
| AATATTTAGTCACTCACAGA+TGG | + | Chr2:57671277-57671296 | None:intergenic | 30.0% | |
| ATGAAATTGGAAAGAACCTT+TGG | - | Chr2:57670603-57670622 | MsG0280009761.01.T01:CDS | 30.0% | |
| GCAATTAAAGATTCACAGAT+TGG | + | Chr2:57669694-57669713 | None:intergenic | 30.0% | |
| TATTAGCAAGTATTAGTCCT+TGG | - | Chr2:57670511-57670530 | MsG0280009761.01.T01:CDS | 30.0% | |
| TGAAATCATTTAGCACTACA+TGG | + | Chr2:57671084-57671103 | None:intergenic | 30.0% | |
| TTCCATTATGAATGAGAACA+GGG | + | Chr2:57669669-57669688 | None:intergenic | 30.0% | |
| TTTCCATTATGAATGAGAAC+AGG | + | Chr2:57669670-57669689 | None:intergenic | 30.0% | |
| ! | AAGTTGTTTCCACCAAAATA+AGG | + | Chr2:57671731-57671750 | None:intergenic | 30.0% |
| ! | CTAAAGTACTTGAATTGTGA+TGG | - | Chr2:57671190-57671209 | MsG0280009761.01.T01:intron | 30.0% |
| ! | GGTTCATTTGAAGTAACAAA+GGG | + | Chr2:57669630-57669649 | None:intergenic | 30.0% |
| ! | TTCGAGCTTTAACAAAATCA+AGG | + | Chr2:57670994-57671013 | None:intergenic | 30.0% |
| !! | AATGGGTTGAAGTATACAAA+AGG | - | Chr2:57671632-57671651 | MsG0280009761.01.T01:CDS | 30.0% |
| !! | TTGGGTAACAAACCTTATTT+TGG | - | Chr2:57671716-57671735 | MsG0280009761.01.T01:CDS | 30.0% |
| !!! | AATGCACTTTTTTGGACATA+AGG | + | Chr2:57671476-57671495 | None:intergenic | 30.0% |
| !!! | ACTTTTTTGGACATAAGGTT+TGG | + | Chr2:57671471-57671490 | None:intergenic | 30.0% |
| !!! | TATTTTGGTGGAAACAACTT+TGG | - | Chr2:57671731-57671750 | MsG0280009761.01.T01:CDS | 30.0% |
| AAGAAAAACAACAGTCACCA+AGG | + | Chr2:57670531-57670550 | None:intergenic | 35.0% | |
| AAGTGATTCTGCTAGATTAC+TGG | - | Chr2:57669515-57669534 | MsG0280009761.01.T01:CDS | 35.0% | |
| AGTGATTCTGCTAGATTACT+GGG | - | Chr2:57669516-57669535 | MsG0280009761.01.T01:CDS | 35.0% | |
| ATAGGACTGTGCATTTAACT+TGG | - | Chr2:57670054-57670073 | MsG0280009761.01.T01:intron | 35.0% | |
| ATCCCTGTTCTCATTCATAA+TGG | - | Chr2:57669664-57669683 | MsG0280009761.01.T01:CDS | 35.0% | |
| CACTTATTCCATTCTACACT+TGG | - | Chr2:57670750-57670769 | MsG0280009761.01.T01:intron | 35.0% | |
| CATACACCTTATCTTGATCA+GGG | + | Chr2:57670883-57670902 | None:intergenic | 35.0% | |
| CCATTCTACACTTGGTTTAA+AGG | - | Chr2:57670758-57670777 | MsG0280009761.01.T01:intron | 35.0% | |
| CCTTTAAACCAAGTGTAGAA+TGG | + | Chr2:57670761-57670780 | None:intergenic | 35.0% | |
| CTGACAAAAACCACAAAGTT+TGG | + | Chr2:57671162-57671181 | None:intergenic | 35.0% | |
| GAACATGCAAAACAATGGAA+CGG | + | Chr2:57671773-57671792 | None:intergenic | 35.0% | |
| GTGTAGAACATGCAAAACAA+TGG | + | Chr2:57671778-57671797 | None:intergenic | 35.0% | |
| TAGTAACTACATTGACACCA+AGG | - | Chr2:57671315-57671334 | MsG0280009761.01.T01:intron | 35.0% | |
| TATGCTCTCAAAGATAGCTT+AGG | - | Chr2:57670245-57670264 | MsG0280009761.01.T01:intron | 35.0% | |
| TTCATATTAAGGCCCTTGTT+TGG | + | Chr2:57670405-57670424 | None:intergenic | 35.0% | |
| TTTAAAGGCTATGAGACCTT+TGG | - | Chr2:57670773-57670792 | MsG0280009761.01.T01:intron | 35.0% | |
| ! | ACAGGGATTTTCTTGTGAAT+AGG | + | Chr2:57669652-57669671 | None:intergenic | 35.0% |
| ! | AGAGATCACAAGCTAGATTT+TGG | - | Chr2:57669776-57669795 | MsG0280009761.01.T01:intron | 35.0% |
| ! | AGCTTTTATTAAAATCGCGG+TGG | - | Chr2:57671019-57671038 | MsG0280009761.01.T01:intron | 35.0% |
| ! | AGTTTTCTCAACCTTTCTGA+TGG | - | Chr2:57671103-57671122 | MsG0280009761.01.T01:intron | 35.0% |
| ! | CACATTTTCATCTGTACTGA+TGG | - | Chr2:57671386-57671405 | MsG0280009761.01.T01:intron | 35.0% |
| ! | CAGGGATTTTCTTGTGAATA+GGG | + | Chr2:57669651-57669670 | None:intergenic | 35.0% |
| ! | GAGATCACAAGCTAGATTTT+GGG | - | Chr2:57669777-57669796 | MsG0280009761.01.T01:intron | 35.0% |
| ! | GGCTGATTATGTTGATAAGA+AGG | - | Chr2:57669798-57669817 | MsG0280009761.01.T01:intron | 35.0% |
| ! | GGGTTCATTTGAAGTAACAA+AGG | + | Chr2:57669631-57669650 | None:intergenic | 35.0% |
| ! | TACTTTGGAGGAGACAAAAT+TGG | - | Chr2:57670713-57670732 | MsG0280009761.01.T01:CDS | 35.0% |
| ! | TTCTTGTTCTTCTCCTTTTC+TGG | + | Chr2:57670630-57670649 | None:intergenic | 35.0% |
| !! | TGGATATTTTTCAGCTTGCA+TGG | - | Chr2:57670484-57670503 | MsG0280009761.01.T01:CDS | 35.0% |
| !!! | AGGAGACAAAATTGGTTTTG+TGG | - | Chr2:57670721-57670740 | MsG0280009761.01.T01:CDS | 35.0% |
| !!! | GGTAACAAACCTTATTTTGG+TGG | - | Chr2:57671719-57671738 | MsG0280009761.01.T01:CDS | 35.0% |
| AAGAACCTTTGGACCAGAAA+AGG | - | Chr2:57670614-57670633 | MsG0280009761.01.T01:CDS | 40.0% | |
| AATGCCCTAAGTTCATTGCT+TGG | - | Chr2:57670816-57670835 | MsG0280009761.01.T01:intron | 40.0% | |
| AGAATTGCCCTAGCTGAAAA+GGG | - | Chr2:57669562-57669581 | MsG0280009761.01.T01:CDS | 40.0% | |
| AGATAAGGTGTATGGCTTCA+TGG | - | Chr2:57670889-57670908 | MsG0280009761.01.T01:intron | 40.0% | |
| ATGCCCTAAGTTCATTGCTT+GGG | - | Chr2:57670817-57670836 | MsG0280009761.01.T01:intron | 40.0% | |
| CCATACACCTTATCTTGATC+AGG | + | Chr2:57670884-57670903 | None:intergenic | 40.0% | |
| CCTGATCAAGATAAGGTGTA+TGG | - | Chr2:57670881-57670900 | MsG0280009761.01.T01:intron | 40.0% | |
| CGTAGAAGCTCATAGATTGT+TGG | - | Chr2:57670667-57670686 | MsG0280009761.01.T01:CDS | 40.0% | |
| CTCTACATTGATGTTGCCAA+AGG | + | Chr2:57670792-57670811 | None:intergenic | 40.0% | |
| CTTCTTGTGCTTCAATACCA+TGG | - | Chr2:57671340-57671359 | MsG0280009761.01.T01:intron | 40.0% | |
| CTTTGATGTGCCAAACTTTG+TGG | - | Chr2:57671149-57671168 | MsG0280009761.01.T01:intron | 40.0% | |
| GATCTCTGATAAGGATCAGA+AGG | + | Chr2:57669763-57669782 | None:intergenic | 40.0% | |
| TAACATCTCCAACCTACTCA+AGG | + | Chr2:57670937-57670956 | None:intergenic | 40.0% | |
| TAAGGATCAGAAGGCAACAA+AGG | + | Chr2:57669754-57669773 | None:intergenic | 40.0% | |
| TGGCAACATCAATGTAGAGA+AGG | - | Chr2:57670793-57670812 | MsG0280009761.01.T01:intron | 40.0% | |
| TGTTAGATGAGTGGTGAGTT+TGG | - | Chr2:57670952-57670971 | MsG0280009761.01.T01:intron | 40.0% | |
| TTGGAACACTTACGAGCTAT+TGG | - | Chr2:57670464-57670483 | MsG0280009761.01.T01:CDS | 40.0% | |
| ! | CTAGCTTGTGATCTCTGATA+AGG | + | Chr2:57669772-57669791 | None:intergenic | 40.0% |
| ! | CTTGATACCCTTTTCAGCTA+GGG | + | Chr2:57669572-57669591 | None:intergenic | 40.0% |
| ! | TTCTACACTTACGCTTTTGC+TGG | - | Chr2:57671790-57671809 | MsG0280009761.01.T01:CDS | 40.0% |
| !! | GAAGTGTTGGAAGAACAGTT+GGG | - | Chr2:57671698-57671717 | MsG0280009761.01.T01:CDS | 40.0% |
| !! | TGAAGTGTTGGAAGAACAGT+TGG | - | Chr2:57671697-57671716 | MsG0280009761.01.T01:CDS | 40.0% |
| !! | TGGAAACAACTTTGGCTTTG+TGG | - | Chr2:57671739-57671758 | MsG0280009761.01.T01:CDS | 40.0% |
| !! | TTGAAGCACAAGAAGTACCT+TGG | + | Chr2:57671335-57671354 | None:intergenic | 40.0% |
| AGAACAAGAAGCTGCGAAGA+AGG | - | Chr2:57670640-57670659 | MsG0280009761.01.T01:CDS | 45.0% | |
| AGATTGTTGGAGCAAGAGCT+GGG | - | Chr2:57670680-57670699 | MsG0280009761.01.T01:CDS | 45.0% | |
| ATTCTGACCCTCATGCCAAA+TGG | + | Chr2:57669547-57669566 | None:intergenic | 45.0% | |
| CAGAATTGCCCTAGCTGAAA+AGG | - | Chr2:57669561-57669580 | MsG0280009761.01.T01:CDS | 45.0% | |
| CTGGGAGACAAGACTTACTT+TGG | - | Chr2:57670698-57670717 | MsG0280009761.01.T01:CDS | 45.0% | |
| GATTACTGGGCAAGTCCATT+TGG | - | Chr2:57669529-57669548 | MsG0280009761.01.T01:CDS | 45.0% | |
| GCTTGATGTCACTGAAGTGT+TGG | - | Chr2:57671685-57671704 | MsG0280009761.01.T01:CDS | 45.0% | |
| GGAGACAAGACTTACTTTGG+AGG | - | Chr2:57670701-57670720 | MsG0280009761.01.T01:CDS | 45.0% | |
| GGTTGGAGATGTTAGATGAG+TGG | - | Chr2:57670943-57670962 | MsG0280009761.01.T01:intron | 45.0% | |
| TAAGGTGTATGGCTTCATGG+TGG | - | Chr2:57670892-57670911 | MsG0280009761.01.T01:intron | 45.0% | |
| TAGATTGTTGGAGCAAGAGC+TGG | - | Chr2:57670679-57670698 | MsG0280009761.01.T01:CDS | 45.0% | |
| TGGCCCAAGCAATGAACTTA+GGG | + | Chr2:57670823-57670842 | None:intergenic | 45.0% | |
| TTGGCCCAAGCAATGAACTT+AGG | + | Chr2:57670824-57670843 | None:intergenic | 45.0% | |
| ! | GCACTACATGGTTTGATTCG+TGG | + | Chr2:57671072-57671091 | None:intergenic | 45.0% |
| ! | GCTTGATACCCTTTTCAGCT+AGG | + | Chr2:57669573-57669592 | None:intergenic | 45.0% |
| !! | CAACTTTGGCTTTGTGGATG+TGG | - | Chr2:57671745-57671764 | MsG0280009761.01.T01:CDS | 45.0% |
| !! | CTTCTCCTTTTCTGGTCCAA+AGG | + | Chr2:57670622-57670641 | None:intergenic | 45.0% |
| !! | GGTTGAGAGTGTTTCCAAGT+CGG | - | Chr2:57670856-57670875 | MsG0280009761.01.T01:intron | 45.0% |
| ATCTTGATCAGGGACCGACT+TGG | + | Chr2:57670873-57670892 | None:intergenic | 50.0% | |
| CTCAACCTGCATGCATCTCT+TGG | + | Chr2:57670843-57670862 | None:intergenic | 50.0% | |
| GGCAAGTCCATTTGGCATGA+GGG | - | Chr2:57669537-57669556 | MsG0280009761.01.T01:CDS | 50.0% | |
| GTCGGTCCCTGATCAAGATA+AGG | - | Chr2:57670874-57670893 | MsG0280009761.01.T01:intron | 50.0% | |
| GTGGAGATCAGGAAGAGGTT+TGG | - | Chr2:57670911-57670930 | MsG0280009761.01.T01:intron | 50.0% | |
| ! | ATGGCTTCATGGTGGAGATC+AGG | - | Chr2:57670900-57670919 | MsG0280009761.01.T01:intron | 50.0% |
| ! | TCATGGTGGAGATCAGGAAG+AGG | - | Chr2:57670906-57670925 | MsG0280009761.01.T01:intron | 50.0% |
| !! | AGGTTTGGCCTTGAGTAGGT+TGG | - | Chr2:57670926-57670945 | MsG0280009761.01.T01:intron | 50.0% |
| !! | GAAGAGGTTTGGCCTTGAGT+AGG | - | Chr2:57670922-57670941 | MsG0280009761.01.T01:intron | 50.0% |
| GGGCAAGTCCATTTGGCATG+AGG | - | Chr2:57669536-57669555 | MsG0280009761.01.T01:CDS | 55.0% | |
| TTGGGCCAAGAGATGCATGC+AGG | - | Chr2:57670835-57670854 | MsG0280009761.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 57669505 | 57671853 | 57669505 | ID=MsG0280009761.01;Name=MsG0280009761.01 |
| Chr2 | mRNA | 57669505 | 57671853 | 57669505 | ID=MsG0280009761.01.T01;Parent=MsG0280009761.01;Name=MsG0280009761.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|3|0|285 |
| Chr2 | exon | 57671539 | 57671853 | 57671539 | ID=MsG0280009761.01.T01:exon:6145;Parent=MsG0280009761.01.T01 |
| Chr2 | exon | 57670448 | 57670759 | 57670448 | ID=MsG0280009761.01.T01:exon:6144;Parent=MsG0280009761.01.T01 |
| Chr2 | exon | 57669505 | 57669735 | 57669505 | ID=MsG0280009761.01.T01:exon:6143;Parent=MsG0280009761.01.T01 |
| Chr2 | CDS | 57671539 | 57671853 | 57671539 | ID=MsG0280009761.01.T01:cds;Parent=MsG0280009761.01.T01 |
| Chr2 | CDS | 57670448 | 57670759 | 57670448 | ID=MsG0280009761.01.T01:cds;Parent=MsG0280009761.01.T01 |
| Chr2 | CDS | 57669505 | 57669735 | 57669505 | ID=MsG0280009761.01.T01:cds;Parent=MsG0280009761.01.T01 |
| Gene Sequence |
| Protein sequence |
