AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039859.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039859.01.T01 MTR_7g080530 99.138 232 2 0 1 232 1 232 6.31e-173 476
MsG0780039859.01.T01 MTR_7g080530 99.138 232 2 0 1 232 1 232 1.32e-171 477
MsG0780039859.01.T01 MTR_2g027270 59.394 165 67 0 68 232 5 169 5.22e-65 204
MsG0780039859.01.T01 MTR_2g027270 61.475 122 47 0 111 232 1 122 1.62e-45 152
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039859.01.T01 AT5G36700 85.799 169 23 1 65 232 59 227 2.48e-98 290
MsG0780039859.01.T01 AT5G36790 68.860 228 63 3 5 232 8 227 3.77e-98 290
MsG0780039859.01.T01 AT5G36700 68.860 228 63 3 5 232 8 227 3.77e-98 290
MsG0780039859.01.T01 AT5G36700 68.860 228 63 3 5 232 8 227 3.77e-98 290
MsG0780039859.01.T01 AT5G36700 68.860 228 63 3 5 232 8 227 3.77e-98 290
MsG0780039859.01.T01 AT5G36790 68.860 228 63 3 5 232 8 227 3.77e-98 290
MsG0780039859.01.T01 AT5G36790 68.860 228 63 3 5 232 8 227 3.77e-98 290
MsG0780039859.01.T01 AT5G47760 60.947 169 63 2 65 232 1 167 5.66e-69 211
MsG0780039859.01.T01 AT5G47760 60.947 169 63 2 65 232 1 167 1.02e-67 211

Find 39 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAGATAATCTATAGTTTA+AGG 0.175951 7:-69815349 None:intergenic
CTTAATTTGCAGGAGTTATA+TGG 0.228079 7:+69816202 MsG0780039859.01.T01:intron
AATGCAGAATTTGACAATAA+AGG 0.273959 7:-69815384 None:intergenic
CTAAGCATGTCAAGTGTTTC+AGG 0.291680 7:-69816252 None:intergenic
ATGCAGAATTTGACAATAAA+GGG 0.297137 7:-69815383 None:intergenic
TGATTTCCCAAAAGATAAAA+AGG 0.297316 7:+69816643 MsG0780039859.01.T01:CDS
TTGAAGGAGCTTGAGCTTGC+TGG 0.325512 7:+69817194 MsG0780039859.01.T01:CDS
GACTAACCGCGTTGACATTC+AGG 0.336383 7:-69816478 None:intergenic
CAAATTCTGCATTTGTTAAG+TGG 0.339515 7:+69815394 MsG0780039859.01.T01:CDS
CCTCGACTTAGTTGAGTTGT+TGG 0.340353 7:-69816423 None:intergenic
ATGATTTAGGTTTATGTCAT+TGG 0.349189 7:+69817158 MsG0780039859.01.T01:intron
TATAGATTATCTCAATTTGC+TGG 0.361874 7:+69815357 MsG0780039859.01.T01:CDS
TTTGTCACACTCAAAGATTA+TGG 0.381720 7:+69815313 MsG0780039859.01.T01:CDS
ACTAAGTCGAGGAAACAATA+TGG 0.400075 7:+69816434 MsG0780039859.01.T01:CDS
GCTTAAGCCAGGGTTCTTGA+TGG 0.403121 7:+69817611 MsG0780039859.01.T01:CDS
TAGGTTGGAGCAGTTGTTGT+GGG 0.404771 7:+69817728 MsG0780039859.01.T01:intron
GTTTATGTCATTGGAGAAGA+TGG 0.414677 7:+69817167 MsG0780039859.01.T01:CDS
ATGTTATTCTTTCAGGAAGA+TGG 0.443633 7:+69817573 MsG0780039859.01.T01:intron
ACTTGACATGCTTAGGTCAA+AGG 0.475749 7:+69816260 MsG0780039859.01.T01:CDS
AAAGGTGACAGCTTGATAGA+AGG 0.481088 7:+69816225 MsG0780039859.01.T01:CDS
AATTACAAAGAATGATGCTT+AGG 0.484603 7:+69815256 MsG0780039859.01.T01:exon
TCAAAGATTATGGTCACATT+CGG 0.498256 7:+69815323 MsG0780039859.01.T01:CDS
TGGAGAAGATGGCATCTTGA+AGG 0.505999 7:+69817178 MsG0780039859.01.T01:CDS
CTGAAACACTTGACATGCTT+AGG 0.507446 7:+69816253 MsG0780039859.01.T01:CDS
TAGAATGGCAACAAAAGCAT+TGG 0.508024 7:+69815455 MsG0780039859.01.T01:CDS
GTTAAGTGGAAAAGAAACAT+TGG 0.512473 7:+69815408 MsG0780039859.01.T01:CDS
GCTGGATATCAGTATGTTGG+TGG 0.534636 7:+69817212 MsG0780039859.01.T01:CDS
TTAGGTTGGAGCAGTTGTTG+TGG 0.537281 7:+69817727 MsG0780039859.01.T01:intron
GGAAAGAAGTTTGAAACACT+TGG 0.541519 7:+69816455 MsG0780039859.01.T01:CDS
TTTGCAGGAGTTATATGGAA+AGG 0.553212 7:+69816207 MsG0780039859.01.T01:intron
ACTATAGCAGCTACTAGTGT+TGG 0.568959 7:+69815288 MsG0780039859.01.T01:CDS
CTTGCTGGATATCAGTATGT+TGG 0.590796 7:+69817209 MsG0780039859.01.T01:CDS
ATATCAGTATGTTGGTGGGC+CGG 0.592199 7:+69817217 MsG0780039859.01.T01:CDS
TCATGCTCCATCAAGAACCC+TGG 0.604696 7:-69817618 None:intergenic
AGCTCATCAGCATTCTGAAG+CGG 0.606940 7:-69815483 None:intergenic
CTGGATATCAGTATGTTGGT+GGG 0.645009 7:+69817213 MsG0780039859.01.T01:CDS
AAAAGATCGAGCTTAAGCCA+GGG 0.676471 7:+69817601 MsG0780039859.01.T01:CDS
CCAACAACTCAACTAAGTCG+AGG 0.694811 7:+69816423 MsG0780039859.01.T01:CDS
ACTTGGCCTGAATGTCAACG+CGG 0.778429 7:+69816472 MsG0780039859.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATTAAAATAATGATAAAA+TGG - Chr7:69817327-69817346 None:intergenic 10.0%
!!! AAACAAAAAACATTTAACTT+AGG + Chr7:69815232-69815251 MsG0780039859.01.T01:five_prime_UTR 15.0%
!!! TCAAATTACATGTATTTTTA+AGG + Chr7:69815870-69815889 MsG0780039859.01.T01:intron 15.0%
!! AATAAACACACTCTTATAAT+AGG - Chr7:69817706-69817725 None:intergenic 20.0%
!! ATAAGATGTTAATAAGTTAG+TGG + Chr7:69815674-69815693 MsG0780039859.01.T01:intron 20.0%
!! ATAATGAAATCAATACATGA+GGG - Chr7:69816050-69816069 None:intergenic 20.0%
!! ATAGTATTCTAATTAGTTGA+AGG - Chr7:69816850-69816869 None:intergenic 20.0%
!! ATTATGACATGTTTATAAAC+CGG + Chr7:69816884-69816903 MsG0780039859.01.T01:intron 20.0%
!! CAACTAATTAGAATACTATA+GGG + Chr7:69816851-69816870 MsG0780039859.01.T01:intron 20.0%
!! TAATTCCATACTAATAAAAG+AGG - Chr7:69817517-69817536 None:intergenic 20.0%
!! TAGTATTCTAATTAGTTGAA+GGG - Chr7:69816849-69816868 None:intergenic 20.0%
!! TCAACTAATTAGAATACTAT+AGG + Chr7:69816850-69816869 MsG0780039859.01.T01:intron 20.0%
!! TTATACAATTACTAAGCAAA+CGG - Chr7:69816528-69816547 None:intergenic 20.0%
!! TTGAGATAATCTATAGTTTA+AGG - Chr7:69815352-69815371 None:intergenic 20.0%
!!! ATAAGAGTGTGTTTATTATT+AGG + Chr7:69817709-69817728 MsG0780039859.01.T01:intron 20.0%
!!! ATGTTACCTTTTTATCTTTT+GGG - Chr7:69816652-69816671 None:intergenic 20.0%
!!! TAAAAACAATCGTTTTAGAA+TGG + Chr7:69815440-69815459 MsG0780039859.01.T01:CDS 20.0%
!!! TATATTCTGTTATTTTTGCT+AGG + Chr7:69815799-69815818 MsG0780039859.01.T01:intron 20.0%
!!! TATGTTACCTTTTTATCTTT+TGG - Chr7:69816653-69816672 None:intergenic 20.0%
!!! TCTAAAACGATTGTTTTTAT+TGG - Chr7:69815439-69815458 None:intergenic 20.0%
!!! TCTAAAATCATTTAATTTCC+CGG - Chr7:69816906-69816925 None:intergenic 20.0%
!!! TTAGAATTTCTTTTGAGATT+TGG + Chr7:69816359-69816378 MsG0780039859.01.T01:intron 20.0%
!!! TTGATGATTAAGTTTTTTCT+AGG + Chr7:69815602-69815621 MsG0780039859.01.T01:intron 20.0%
!!! TTTTATGTTGTTTATTTGTG+TGG - Chr7:69815204-69815223 None:intergenic 20.0%
! AAACATGTCATAATTCATGT+TGG - Chr7:69816878-69816897 None:intergenic 25.0%
! AACATGTCATAATTCATGTT+GGG - Chr7:69816877-69816896 None:intergenic 25.0%
! AATGCAGAATTTGACAATAA+AGG - Chr7:69815387-69815406 None:intergenic 25.0%
! AATTAAGTATCAACGGAAAA+AGG - Chr7:69816189-69816208 None:intergenic 25.0%
! AATTACAAAGAATGATGCTT+AGG + Chr7:69815256-69815275 MsG0780039859.01.T01:exon 25.0%
! AGTATTCTAATTAGTTGAAG+GGG - Chr7:69816848-69816867 None:intergenic 25.0%
! ATCAAAACATCATTGTCATT+AGG - Chr7:69817445-69817464 None:intergenic 25.0%
! ATGCAGAATTTGACAATAAA+GGG - Chr7:69815386-69815405 None:intergenic 25.0%
! CATAATGAAATCAATACATG+AGG - Chr7:69816051-69816070 None:intergenic 25.0%
! CATGCATTATCATTCAAAAT+TGG - Chr7:69817373-69817392 None:intergenic 25.0%
! CTCTATTATTGAATTGGAAA+AGG + Chr7:69815555-69815574 MsG0780039859.01.T01:intron 25.0%
! GAATTGGAAAAGGAAAAAAA+TGG + Chr7:69815565-69815584 MsG0780039859.01.T01:intron 25.0%
! GCTTCAAAATATTTAACAAC+TGG + Chr7:69816560-69816579 MsG0780039859.01.T01:intron 25.0%
! TAAACATTAGGGAAAAAGAT+TGG + Chr7:69816391-69816410 MsG0780039859.01.T01:intron 25.0%
! TATAGATTATCTCAATTTGC+TGG + Chr7:69815357-69815376 MsG0780039859.01.T01:CDS 25.0%
! TGATTTCCCAAAAGATAAAA+AGG + Chr7:69816643-69816662 MsG0780039859.01.T01:CDS 25.0%
! TGTTAACTTCATTTATCACT+TGG - Chr7:69816934-69816953 None:intergenic 25.0%
! TTATGACATGTTTATAAACC+GGG + Chr7:69816885-69816904 MsG0780039859.01.T01:intron 25.0%
! TTATGATAAGCATATACTAC+TGG + Chr7:69817014-69817033 MsG0780039859.01.T01:intron 25.0%
! TTATGCCTCTATTATTGAAT+TGG + Chr7:69815549-69815568 MsG0780039859.01.T01:intron 25.0%
!! ACATATATCATCTTTTGCTT+TGG + Chr7:69816668-69816687 MsG0780039859.01.T01:intron 25.0%
!! ACTTTTATCTTTGATTGTGA+CGG + Chr7:69815522-69815541 MsG0780039859.01.T01:CDS 25.0%
!! ATGATTTAGGTTTATGTCAT+TGG + Chr7:69817158-69817177 MsG0780039859.01.T01:intron 25.0%
!! CTTTTCCAATTCAATAATAG+AGG - Chr7:69815557-69815576 None:intergenic 25.0%
!! TTGAACCTCTTTTATTAGTA+TGG + Chr7:69817509-69817528 MsG0780039859.01.T01:intron 25.0%
!!! AGCTTTTAATTTTGATCACT+TGG + Chr7:69817289-69817308 MsG0780039859.01.T01:intron 25.0%
!!! TTAGTGGTTATGTTATTTTC+TGG + Chr7:69815690-69815709 MsG0780039859.01.T01:intron 25.0%
!!! TTTATCTTTTGGGAAATCAA+TGG - Chr7:69816642-69816661 None:intergenic 25.0%
AACTTCATTTATCACTTGGT+TGG - Chr7:69816930-69816949 None:intergenic 30.0%
ACACTCTTATAATAGGAACA+GGG - Chr7:69817699-69817718 None:intergenic 30.0%
ATGATGTCCATATTCCATAT+TGG - Chr7:69815720-69815739 None:intergenic 30.0%
ATGTTATTCTTTCAGGAAGA+TGG + Chr7:69817573-69817592 MsG0780039859.01.T01:intron 30.0%
ATGTTGCCAATTATCAAGAA+AGG - Chr7:69817665-69817684 None:intergenic 30.0%
CTTAATATGTGTATGCCATT+GGG + Chr7:69816124-69816143 MsG0780039859.01.T01:intron 30.0%
GAGTGTGTTTATTATTAGGT+TGG + Chr7:69817713-69817732 MsG0780039859.01.T01:intron 30.0%
GGATCTCTTGATAAACATTA+GGG + Chr7:69816380-69816399 MsG0780039859.01.T01:intron 30.0%
GGTTTGTGTACTAATAATGT+AGG + Chr7:69816281-69816300 MsG0780039859.01.T01:intron 30.0%
GTACTAATAATGTAGGAACT+AGG + Chr7:69816288-69816307 MsG0780039859.01.T01:intron 30.0%
GTTAAGTGGAAAAGAAACAT+TGG + Chr7:69815408-69815427 MsG0780039859.01.T01:CDS 30.0%
TATACGAACTCAATACATAC+CGG - Chr7:69817239-69817258 None:intergenic 30.0%
TATACTTCAACTTCATACAC+TGG - Chr7:69817120-69817139 None:intergenic 30.0%
TCAAAGATTATGGTCACATT+CGG + Chr7:69815323-69815342 MsG0780039859.01.T01:CDS 30.0%
TCCTGCAAATTAAGTATCAA+CGG - Chr7:69816196-69816215 None:intergenic 30.0%
TCTTAATATGTGTATGCCAT+TGG + Chr7:69816123-69816142 MsG0780039859.01.T01:intron 30.0%
TGGATCTCTTGATAAACATT+AGG + Chr7:69816379-69816398 MsG0780039859.01.T01:intron 30.0%
TTAAAAGCTTACAGAAGAAC+AGG - Chr7:69817278-69817297 None:intergenic 30.0%
TTCAATATATGCAGTCGATT+TGG - Chr7:69817494-69817513 None:intergenic 30.0%
TTTGTCACACTCAAAGATTA+TGG + Chr7:69815313-69815332 MsG0780039859.01.T01:CDS 30.0%
! ACTTTTACACTTGCAAGTAA+AGG - Chr7:69816314-69816333 None:intergenic 30.0%
! CAAATTCTGCATTTGTTAAG+TGG + Chr7:69815394-69815413 MsG0780039859.01.T01:CDS 30.0%
! TTCTAGCCTTTCTTGATAAT+TGG + Chr7:69817656-69817675 MsG0780039859.01.T01:intron 30.0%
!! CTTAATTTGCAGGAGTTATA+TGG + Chr7:69816202-69816221 MsG0780039859.01.T01:intron 30.0%
!!! TATTTTCTGGAGTTCCAATA+TGG + Chr7:69815703-69815722 MsG0780039859.01.T01:intron 30.0%
!!! TTTTTAAGGTTAGTGTTGTC+TGG + Chr7:69815884-69815903 MsG0780039859.01.T01:intron 30.0%
ACTAAGTCGAGGAAACAATA+TGG + Chr7:69816434-69816453 MsG0780039859.01.T01:CDS 35.0%
AGTTAAAAGAGCTCCAAACT+TGG - Chr7:69816728-69816747 None:intergenic 35.0%
ATCCATTGATAAGAACCCAA+TGG - Chr7:69816142-69816161 None:intergenic 35.0%
ATGATGCAAAAATTTCCTCC+TGG - Chr7:69816592-69816611 None:intergenic 35.0%
ATTGGGTTCTTATCAATGGA+TGG + Chr7:69816141-69816160 MsG0780039859.01.T01:intron 35.0%
CACACTCTTATAATAGGAAC+AGG - Chr7:69817700-69817719 None:intergenic 35.0%
GACATACGTTAGCATGATTT+AGG + Chr7:69817145-69817164 MsG0780039859.01.T01:intron 35.0%
GTTTATGTCATTGGAGAAGA+TGG + Chr7:69817167-69817186 MsG0780039859.01.T01:CDS 35.0%
TACAATTACTAAGCAAACGG+AGG - Chr7:69816525-69816544 None:intergenic 35.0%
TATGGACATCATGCTTGAAA+TGG + Chr7:69815728-69815747 MsG0780039859.01.T01:intron 35.0%
TGGAGTTCCAATATGGAATA+TGG + Chr7:69815710-69815729 MsG0780039859.01.T01:intron 35.0%
TTCGTGCATGTTATTCTTTC+AGG + Chr7:69817566-69817585 MsG0780039859.01.T01:intron 35.0%
TTCTGTTATGCTATGTTCGA+GGG + Chr7:69817066-69817085 MsG0780039859.01.T01:intron 35.0%
TTTCTGTTATGCTATGTTCG+AGG + Chr7:69817065-69817084 MsG0780039859.01.T01:intron 35.0%
TTTGCAGGAGTTATATGGAA+AGG + Chr7:69816207-69816226 MsG0780039859.01.T01:intron 35.0%
! CGAAGTTTTCACAAAGTGAA+AGG - Chr7:69815928-69815947 None:intergenic 35.0%
! GGAAAGAAGTTTGAAACACT+TGG + Chr7:69816455-69816474 MsG0780039859.01.T01:CDS 35.0%
! TAGAATGGCAACAAAAGCAT+TGG + Chr7:69815455-69815474 MsG0780039859.01.T01:CDS 35.0%
! TTCAACTTCATACACTGGTT+TGG - Chr7:69817115-69817134 None:intergenic 35.0%
! TTTAACAACTGGCTTATTCC+AGG + Chr7:69816571-69816590 MsG0780039859.01.T01:intron 35.0%
!! TCAACTTCATACACTGGTTT+GGG - Chr7:69817114-69817133 None:intergenic 35.0%
!! TCCGTTGATACTTAATTTGC+AGG + Chr7:69816192-69816211 MsG0780039859.01.T01:intron 35.0%
AAAAAGATCGAGCTTAAGCC+AGG + Chr7:69817600-69817619 MsG0780039859.01.T01:CDS 40.0%
AAAAGATCGAGCTTAAGCCA+GGG + Chr7:69817601-69817620 MsG0780039859.01.T01:CDS 40.0%
AAAGGTGACAGCTTGATAGA+AGG + Chr7:69816225-69816244 MsG0780039859.01.T01:CDS 40.0%
AAGTGTTTACTCGCCAAGTT+TGG + Chr7:69816712-69816731 MsG0780039859.01.T01:intron 40.0%
ACTATAGCAGCTACTAGTGT+TGG + Chr7:69815288-69815307 MsG0780039859.01.T01:CDS 40.0%
ACTTGACATGCTTAGGTCAA+AGG + Chr7:69816260-69816279 MsG0780039859.01.T01:CDS 40.0%
ACTTTGTGAAAACTTCGAGC+AGG + Chr7:69815931-69815950 MsG0780039859.01.T01:intron 40.0%
ATTACTAAGCAAACGGAGGA+AGG - Chr7:69816521-69816540 None:intergenic 40.0%
CTAAGATGAATCGTGCATCA+AGG + Chr7:69816799-69816818 MsG0780039859.01.T01:intron 40.0%
CTAAGCATGTCAAGTGTTTC+AGG - Chr7:69816255-69816274 None:intergenic 40.0%
CTGAAACACTTGACATGCTT+AGG + Chr7:69816253-69816272 MsG0780039859.01.T01:CDS 40.0%
CTGGATATCAGTATGTTGGT+GGG + Chr7:69817213-69817232 MsG0780039859.01.T01:CDS 40.0%
CTTGATGCACGATTCATCTT+AGG - Chr7:69816801-69816820 None:intergenic 40.0%
CTTGCTGGATATCAGTATGT+TGG + Chr7:69817209-69817228 MsG0780039859.01.T01:CDS 40.0%
GAATAACATGCACGAAGAAG+AGG - Chr7:69817562-69817581 None:intergenic 40.0%
GGTTAAAAGAGCTCCAAACT+TGG - Chr7:69816780-69816799 None:intergenic 40.0%
TGCCATTGGGTTCTTATCAA+TGG + Chr7:69816137-69816156 MsG0780039859.01.T01:intron 40.0%
! GGGATAGTTTGTGCAAGATA+TGG - Chr7:69817092-69817111 None:intergenic 40.0%
! TGCTGAACTTGATGATTGCA+TGG + Chr7:69816990-69817009 MsG0780039859.01.T01:intron 40.0%
!! AACTTCATACACTGGTTTGG+GGG - Chr7:69817112-69817131 None:intergenic 40.0%
!! CAACTTCATACACTGGTTTG+GGG - Chr7:69817113-69817132 None:intergenic 40.0%
ACATGCACGAAGAAGAGGAA+AGG - Chr7:69817557-69817576 None:intergenic 45.0%
ATGAATCGTGCATCAAGGCT+TGG + Chr7:69816804-69816823 MsG0780039859.01.T01:intron 45.0%
CCAACAACTCAACTAAGTCG+AGG + Chr7:69816423-69816442 MsG0780039859.01.T01:CDS 45.0%
GCTGGATATCAGTATGTTGG+TGG + Chr7:69817212-69817231 MsG0780039859.01.T01:CDS 45.0%
TCATGCTTCAGATGGTGACT+TGG - Chr7:69817412-69817431 None:intergenic 45.0%
TGGAGAAGATGGCATCTTGA+AGG + Chr7:69817178-69817197 MsG0780039859.01.T01:CDS 45.0%
TTGTGAAAACTTCGAGCAGG+TGG + Chr7:69815934-69815953 MsG0780039859.01.T01:intron 45.0%
! AACAACTGGCTTATTCCAGG+AGG + Chr7:69816574-69816593 MsG0780039859.01.T01:intron 45.0%
! AGCTCATCAGCATTCTGAAG+CGG - Chr7:69815486-69815505 None:intergenic 45.0%
! ATATCAGTATGTTGGTGGGC+CGG + Chr7:69817217-69817236 MsG0780039859.01.T01:CDS 45.0%
! CCTCGACTTAGTTGAGTTGT+TGG - Chr7:69816426-69816445 None:intergenic 45.0%
! TAGGTTGGAGCAGTTGTTGT+GGG + Chr7:69817728-69817747 MsG0780039859.01.T01:intron 45.0%
!! TTAGGTTGGAGCAGTTGTTG+TGG + Chr7:69817727-69817746 MsG0780039859.01.T01:intron 45.0%
AACTTCGAGCAGGTGGCAAA+AGG + Chr7:69815941-69815960 MsG0780039859.01.T01:intron 50.0%
ACCTCTGCTCATGCTTCAGA+TGG - Chr7:69817420-69817439 None:intergenic 50.0%
ACTTCGAGCAGGTGGCAAAA+GGG + Chr7:69815942-69815961 MsG0780039859.01.T01:intron 50.0%
ACTTGGCCTGAATGTCAACG+CGG + Chr7:69816472-69816491 MsG0780039859.01.T01:CDS 50.0%
GCTTAAGCCAGGGTTCTTGA+TGG + Chr7:69817611-69817630 MsG0780039859.01.T01:CDS 50.0%
TCATGCTCCATCAAGAACCC+TGG - Chr7:69817621-69817640 None:intergenic 50.0%
TTGAAGGAGCTTGAGCTTGC+TGG + Chr7:69817194-69817213 MsG0780039859.01.T01:CDS 50.0%
! ACCATCTGAAGCATGAGCAG+AGG + Chr7:69817416-69817435 MsG0780039859.01.T01:intron 50.0%
! GACTAACCGCGTTGACATTC+AGG - Chr7:69816481-69816500 None:intergenic 50.0%
!! CAAGGCTTGGTCTTGAGGAA+TGG + Chr7:69816817-69816836 MsG0780039859.01.T01:intron 50.0%
!! CTTGGTCTTGAGGAATGGAG+AGG + Chr7:69816822-69816841 MsG0780039859.01.T01:intron 50.0%
!! TGCATCAAGGCTTGGTCTTG+AGG + Chr7:69816812-69816831 MsG0780039859.01.T01:intron 50.0%
CTTCGAGCAGGTGGCAAAAG+GGG + Chr7:69815943-69815962 MsG0780039859.01.T01:intron 55.0%
Chromosome Type Strat End Strand Name
Chr7 gene 69815199 69817787 69815199 ID=MsG0780039859.01;Name=MsG0780039859.01
Chr7 mRNA 69815199 69817787 69815199 ID=MsG0780039859.01.T01;Parent=MsG0780039859.01;Name=MsG0780039859.01.T01;_AED=0.49;_eAED=0.49;_QI=68|1|0.85|1|1|1|7|0|232
Chr7 exon 69815199 69815543 69815199 ID=MsG0780039859.01.T01:exon:12805;Parent=MsG0780039859.01.T01
Chr7 exon 69816214 69816281 69816214 ID=MsG0780039859.01.T01:exon:12806;Parent=MsG0780039859.01.T01
Chr7 exon 69816401 69816493 69816401 ID=MsG0780039859.01.T01:exon:12807;Parent=MsG0780039859.01.T01
Chr7 exon 69816593 69816664 69816593 ID=MsG0780039859.01.T01:exon:12808;Parent=MsG0780039859.01.T01
Chr7 exon 69817167 69817238 69817167 ID=MsG0780039859.01.T01:exon:12809;Parent=MsG0780039859.01.T01
Chr7 exon 69817588 69817647 69817588 ID=MsG0780039859.01.T01:exon:12810;Parent=MsG0780039859.01.T01
Chr7 exon 69817731 69817787 69817731 ID=MsG0780039859.01.T01:exon:12811;Parent=MsG0780039859.01.T01
Chr7 five_prime_UTR 69815199 69815266 69815199 ID=MsG0780039859.01.T01:five_prime_utr;Parent=MsG0780039859.01.T01
Chr7 CDS 69815267 69815543 69815267 ID=MsG0780039859.01.T01:cds;Parent=MsG0780039859.01.T01
Chr7 CDS 69816214 69816281 69816214 ID=MsG0780039859.01.T01:cds;Parent=MsG0780039859.01.T01
Chr7 CDS 69816401 69816493 69816401 ID=MsG0780039859.01.T01:cds;Parent=MsG0780039859.01.T01
Chr7 CDS 69816593 69816664 69816593 ID=MsG0780039859.01.T01:cds;Parent=MsG0780039859.01.T01
Chr7 CDS 69817167 69817238 69817167 ID=MsG0780039859.01.T01:cds;Parent=MsG0780039859.01.T01
Chr7 CDS 69817588 69817647 69817588 ID=MsG0780039859.01.T01:cds;Parent=MsG0780039859.01.T01
Chr7 CDS 69817731 69817787 69817731 ID=MsG0780039859.01.T01:cds;Parent=MsG0780039859.01.T01
Gene Sequence

>MsG0780039859.01.T01

ATGATGCTTAGGAGCAGCAGCACTATAGCAGCTACTAGTGTTGGTGTTTGTCACACTCAAAGATTATGGTCACATTCGGTTACCTTAAACTATAGATTATCTCAATTTGCTGGTAACCCTTTATTGTCAAATTCTGCATTTGTTAAGTGGAAAAGAAACATTGGTAATTCCAATAAAAACAATCGTTTTAGAATGGCAACAAAAGCATTGGCACAACCGCTTCAGAATGCTGATGAGCTTATTGATTCTGTTGAGACTTTTATCTTTGATTGTGACGGAGTTATATGGAAAGGTGACAGCTTGATAGAAGGAGTGCCTGAAACACTTGACATGCTTAGGTCAAAGGGAAAAAGATTGGTTTTTGTCACCAACAACTCAACTAAGTCGAGGAAACAATATGGAAAGAAGTTTGAAACACTTGGCCTGAATGTCAACGCGGAGGAAATTTTTGCATCATCTTTTGCAGTTGCTGCGTATTTGAAATCCATTGATTTCCCAAAAGATAAAAAGGTTTATGTCATTGGAGAAGATGGCATCTTGAAGGAGCTTGAGCTTGCTGGATATCAGTATGTTGGTGGGCCGGAAGATGGCGAGAAAAAGATCGAGCTTAAGCCAGGGTTCTTGATGGAGCATGATGAAGATGTTGGAGCAGTTGTTGTGGGATTTGATCGCTATTTCAACTACTATAAAGTCCAGTAA

Protein sequence

>MsG0780039859.01.T01

MMLRSSSTIAATSVGVCHTQRLWSHSVTLNYRLSQFAGNPLLSNSAFVKWKRNIGNSNKNNRFRMATKALAQPLQNADELIDSVETFIFDCDGVIWKGDSLIEGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLNVNAEEIFASSFAVAAYLKSIDFPKDKKVYVIGEDGILKELELAGYQYVGGPEDGEKKIELKPGFLMEHDEDVGAVVVGFDRYFNYYKVQ*