AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027458.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027458.01.T01 MTR_5g059130 96.131 336 13 0 1 336 1 336 0.0 669
MsG0580027458.01.T01 MTR_5g059140 81.953 338 57 3 1 336 1 336 0.0 554
MsG0580027458.01.T01 MTR_3g072820 73.494 332 85 1 5 336 6 334 0.0 526
MsG0580027458.01.T01 MTR_3g072810 48.961 337 165 4 1 336 1 331 1.21e-104 310
MsG0580027458.01.T01 MTR_5g011250 40.118 339 188 5 5 331 7 342 2.05e-82 254
MsG0580027458.01.T01 MTR_7g068650 36.310 336 197 7 3 326 12 342 4.22e-69 220
MsG0580027458.01.T01 MTR_7g062580 35.849 318 195 5 20 333 31 343 1.73e-68 218
MsG0580027458.01.T01 MTR_3g070860 35.347 331 202 5 3 326 12 337 5.56e-67 214
MsG0580027458.01.T01 MTR_5g082750 34.139 331 206 5 3 326 11 336 1.19e-65 211
MsG0580027458.01.T01 MTR_7g062550 36.538 312 189 5 20 327 36 342 1.91e-65 211
MsG0580027458.01.T01 MTR_7g063730 35.535 318 196 5 20 333 40 352 2.10e-65 211
MsG0580027458.01.T01 MTR_7g062600 35.849 318 196 6 20 333 27 340 3.35e-65 210
MsG0580027458.01.T01 MTR_3g091360 38.567 293 168 4 44 330 52 338 3.81e-64 207
MsG0580027458.01.T01 MTR_7g062570 34.062 320 202 5 18 333 29 343 7.45e-64 206
MsG0580027458.01.T01 MTR_2g437380 36.709 316 186 6 19 326 27 336 2.10e-63 205
MsG0580027458.01.T01 MTR_5g032870 36.129 310 190 4 24 327 19 326 1.76e-62 202
MsG0580027458.01.T01 MTR_8g024120 37.898 314 180 6 20 326 18 323 2.45e-62 202
MsG0580027458.01.T01 MTR_4g015790 34.571 350 202 9 3 330 11 355 5.60e-62 202
MsG0580027458.01.T01 MTR_3g117420 35.889 287 174 6 42 322 50 332 9.57e-62 201
MsG0580027458.01.T01 MTR_8g074070 37.024 289 168 7 42 322 50 332 1.20e-61 201
MsG0580027458.01.T01 MTR_3g091350 36.280 328 195 7 10 330 25 345 1.34e-61 201
MsG0580027458.01.T01 MTR_4g116010 38.298 282 166 5 44 322 50 326 1.99e-61 200
MsG0580027458.01.T01 MTR_5g055900 33.333 324 208 5 6 326 10 328 6.04e-60 196
MsG0580027458.01.T01 MTR_5g048570 34.049 326 205 5 4 326 8 326 9.46e-59 193
MsG0580027458.01.T01 MTR_5g032880 37.586 290 174 3 44 327 376 664 1.01e-58 201
MsG0580027458.01.T01 MTR_5g032880 37.124 299 174 7 44 335 38 329 3.42e-58 199
MsG0580027458.01.T01 MTR_7g102820 33.739 329 192 7 20 327 38 361 1.19e-58 194
MsG0580027458.01.T01 MTR_0009s0050 36.111 288 175 5 43 326 46 328 2.56e-58 192
MsG0580027458.01.T01 MTR_0009s0050 36.111 288 175 5 43 326 46 328 2.73e-58 192
MsG0580027458.01.T01 MTR_3g117485 33.557 298 189 5 42 332 47 342 3.39e-58 192
MsG0580027458.01.T01 MTR_1g062110 33.846 325 190 8 20 327 38 354 5.37e-58 192
MsG0580027458.01.T01 MTR_3g092890 37.061 313 185 8 18 326 13 317 1.48e-57 189
MsG0580027458.01.T01 MTR_8g074050 35.889 287 174 6 42 322 50 332 2.57e-57 189
MsG0580027458.01.T01 MTR_7g081710 34.663 326 191 8 13 327 18 332 6.77e-57 188
MsG0580027458.01.T01 MTR_5g055680 31.915 329 210 7 4 326 8 328 7.72e-57 188
MsG0580027458.01.T01 MTR_3g063180 30.499 341 225 5 2 335 6 341 1.78e-56 187
MsG0580027458.01.T01 MTR_3g117485 34.191 272 176 3 62 332 1 270 2.15e-56 185
MsG0580027458.01.T01 MTR_1g070085 31.761 318 210 4 13 327 7 320 3.01e-56 186
MsG0580027458.01.T01 MTR_1g070085 31.761 318 210 4 13 327 7 320 3.01e-56 186
MsG0580027458.01.T01 MTR_5g048470 31.928 332 210 8 4 327 13 336 3.25e-56 187
MsG0580027458.01.T01 MTR_8g074070 36.332 289 151 8 42 322 50 313 2.90e-55 184
MsG0580027458.01.T01 MTR_4g093840 34.564 298 179 7 44 332 62 352 7.32e-55 183
MsG0580027458.01.T01 MTR_5g065010 34.069 317 195 6 18 327 14 323 1.58e-54 182
MsG0580027458.01.T01 MTR_1g070135 30.189 318 214 4 19 333 14 326 2.28e-54 181
MsG0580027458.01.T01 MTR_7g045650 34.397 282 176 5 4 281 20 296 2.38e-54 181
MsG0580027458.01.T01 MTR_1g033810 33.436 326 206 6 7 326 10 330 4.98e-54 181
MsG0580027458.01.T01 MTR_8g064200 31.928 332 209 9 4 327 18 340 6.19e-54 181
MsG0580027458.01.T01 MTR_8g064200 31.928 332 209 9 4 327 13 335 6.76e-54 181
MsG0580027458.01.T01 MTR_5g048550 30.816 331 221 5 6 333 10 335 6.99e-53 178
MsG0580027458.01.T01 MTR_5g055820 32.239 335 216 7 4 333 8 336 8.09e-53 178
MsG0580027458.01.T01 MTR_2g072910 30.091 329 220 6 4 327 12 335 3.47e-52 176
MsG0580027458.01.T01 MTR_8g075890 33.550 307 190 6 6 305 4 303 3.92e-52 176
MsG0580027458.01.T01 MTR_3g026150 32.738 336 214 6 4 333 19 348 6.76e-52 176
MsG0580027458.01.T01 MTR_2g102570 34.130 293 180 6 44 330 52 337 3.00e-51 174
MsG0580027458.01.T01 MTR_2g072890 30.606 330 218 7 4 327 12 336 1.39e-50 172
MsG0580027458.01.T01 MTR_5g055690 29.518 332 225 6 6 333 10 336 1.70e-50 172
MsG0580027458.01.T01 MTR_5g048850 29.878 328 220 6 4 327 8 329 2.32e-50 171
MsG0580027458.01.T01 MTR_1g070120 30.375 293 197 3 44 333 38 326 3.00e-50 171
MsG0580027458.01.T01 MTR_0328s0030 30.793 328 219 5 8 332 10 332 3.04e-50 171
MsG0580027458.01.T01 MTR_8g075830 32.899 307 192 6 6 305 4 303 4.22e-50 171
MsG0580027458.01.T01 MTR_1g048940 31.515 330 205 8 8 327 12 330 9.00e-50 170
MsG0580027458.01.T01 MTR_3g058610 33.670 297 181 7 18 305 14 303 9.24e-50 170
MsG0580027458.01.T01 MTR_5g048740 32.424 330 203 9 6 327 11 328 1.01e-49 169
MsG0580027458.01.T01 MTR_1g034120 31.818 330 197 8 24 330 8 332 1.22e-49 169
MsG0580027458.01.T01 MTR_6g015950 31.790 324 210 7 7 326 3 319 2.31e-49 168
MsG0580027458.01.T01 MTR_7g102720 35.786 299 170 9 38 327 31 316 2.93e-49 168
MsG0580027458.01.T01 MTR_4g087090 31.348 319 186 10 22 318 10 317 7.85e-49 167
MsG0580027458.01.T01 MTR_2g437380 36.585 246 150 3 83 326 1 242 1.05e-48 164
MsG0580027458.01.T01 MTR_3g088565 34.228 298 173 7 42 327 1 287 1.17e-48 166
MsG0580027458.01.T01 MTR_1g034140 32.063 315 192 6 20 319 4 311 1.49e-48 166
MsG0580027458.01.T01 MTR_0009s0050 38.710 217 130 2 111 326 16 230 2.13e-48 163
MsG0580027458.01.T01 MTR_0009s0050 38.710 217 130 2 111 326 16 230 2.82e-48 163
MsG0580027458.01.T01 MTR_1g034060 31.098 328 202 7 24 330 8 332 6.10e-48 165
MsG0580027458.01.T01 MTR_3g045230 36.082 291 168 8 44 327 56 335 7.26e-48 165
MsG0580027458.01.T01 MTR_7g016090 30.408 319 216 4 18 335 16 329 9.39e-48 164
MsG0580027458.01.T01 MTR_7g016090 30.408 319 216 4 18 335 14 327 9.53e-48 164
MsG0580027458.01.T01 MTR_1g070080 30.769 312 209 3 19 327 13 320 1.60e-47 164
MsG0580027458.01.T01 MTR_0009s0480 29.179 329 223 6 3 327 6 328 1.84e-47 164
MsG0580027458.01.T01 MTR_8g009110 31.741 293 185 5 44 327 60 346 1.89e-47 164
MsG0580027458.01.T01 MTR_4g115990 34.138 290 166 5 44 332 46 311 3.12e-47 162
MsG0580027458.01.T01 MTR_3g043900 35.664 286 175 5 44 327 56 334 6.61e-47 162
MsG0580027458.01.T01 MTR_8g041620 31.847 314 194 6 18 319 42 347 3.31e-46 161
MsG0580027458.01.T01 MTR_5g055800 29.697 330 219 9 3 327 7 328 3.67e-46 160
MsG0580027458.01.T01 MTR_5g022020 31.864 295 189 5 18 305 14 303 4.06e-46 160
MsG0580027458.01.T01 MTR_8g009080 34.056 323 192 10 16 327 66 378 7.99e-46 160
MsG0580027458.01.T01 MTR_8g009160 31.399 293 185 5 44 327 60 345 1.50e-45 159
MsG0580027458.01.T01 MTR_1g070085 33.878 245 159 2 83 327 1 242 4.96e-45 155
MsG0580027458.01.T01 MTR_8g009090 31.864 295 179 7 44 326 60 344 6.51e-45 157
MsG0580027458.01.T01 MTR_2g069010 30.514 331 204 11 13 327 37 357 6.90e-45 157
MsG0580027458.01.T01 MTR_2g068960 30.422 332 209 10 14 331 32 355 8.71e-45 157
MsG0580027458.01.T01 MTR_4g087110 34.106 302 173 8 45 327 33 327 9.91e-45 156
MsG0580027458.01.T01 MTR_2g069210 31.250 320 197 6 20 327 40 348 1.18e-44 157
MsG0580027458.01.T01 MTR_4g087140 32.219 329 198 10 20 327 4 328 2.54e-44 155
MsG0580027458.01.T01 MTR_2g069090 31.546 317 201 6 20 327 44 353 2.92e-44 155
MsG0580027458.01.T01 MTR_2g069190 31.962 316 200 5 20 327 44 352 3.42e-44 155
MsG0580027458.01.T01 MTR_2g068840 30.303 297 187 6 43 327 54 342 3.77e-44 155
MsG0580027458.01.T01 MTR_7g016080 32.923 325 196 9 18 336 14 322 4.08e-44 154
MsG0580027458.01.T01 MTR_8g041600 30.938 320 189 8 18 319 42 347 8.39e-44 155
MsG0580027458.01.T01 MTR_2g068950 30.631 333 207 11 14 331 32 355 1.35e-43 154
MsG0580027458.01.T01 MTR_8g009170 30.284 317 203 7 20 327 39 346 1.61e-43 154
MsG0580027458.01.T01 MTR_8g008930 30.822 292 187 5 44 326 60 345 1.68e-43 154
MsG0580027458.01.T01 MTR_3g026150 36.066 244 151 3 91 333 6 245 1.81e-43 150
MsG0580027458.01.T01 MTR_3g083370 34.354 294 176 9 45 331 5 288 3.47e-43 151
MsG0580027458.01.T01 MTR_1g070100 33.750 240 156 2 88 327 2 238 4.55e-43 149
MsG0580027458.01.T01 MTR_8g028435 30.976 297 181 6 44 327 60 345 4.75e-43 152
MsG0580027458.01.T01 MTR_2g025120 34.364 291 172 10 45 327 5 284 8.53e-43 150
MsG0580027458.01.T01 MTR_4g087120 30.838 334 197 10 24 332 8 332 1.87e-42 150
MsG0580027458.01.T01 MTR_7g062560 32.177 317 196 7 20 332 38 339 5.74e-42 149
MsG0580027458.01.T01 MTR_7g029655 30.968 310 183 8 40 333 63 357 7.66e-42 149
MsG0580027458.01.T01 MTR_1g011580 31.597 288 186 6 44 330 63 340 9.91e-42 149
MsG0580027458.01.T01 MTR_4g087100 29.305 331 202 7 24 330 8 330 1.35e-41 148
MsG0580027458.01.T01 MTR_1g062110 32.453 265 154 8 20 267 38 294 1.53e-41 147
MsG0580027458.01.T01 MTR_2g069300 28.793 323 202 8 20 327 30 339 9.31e-41 146
MsG0580027458.01.T01 MTR_1g093110 29.377 337 201 8 12 327 35 355 1.62e-40 146
MsG0580027458.01.T01 MTR_2g069020 30.383 339 189 11 14 327 36 352 2.97e-40 145
MsG0580027458.01.T01 MTR_4g117880 31.525 295 181 8 44 326 60 345 3.48e-40 145
MsG0580027458.01.T01 MTR_6g464620 31.429 315 196 7 17 318 40 347 3.83e-40 145
MsG0580027458.01.T01 MTR_0056s0160 34.101 217 138 4 113 327 1 214 4.19e-40 141
MsG0580027458.01.T01 MTR_2g069020 30.383 339 189 11 14 327 36 352 6.10e-40 145
MsG0580027458.01.T01 MTR_1g102070 32.302 291 180 7 41 318 56 342 9.13e-40 144
MsG0580027458.01.T01 MTR_7g105070 30.514 331 208 9 13 330 28 349 2.05e-39 143
MsG0580027458.01.T01 MTR_1g070185 29.321 324 197 7 18 327 43 348 2.83e-39 142
MsG0580027458.01.T01 MTR_1g070135 29.762 252 169 4 19 267 14 260 4.64e-39 140
MsG0580027458.01.T01 MTR_8g033380 30.255 314 200 7 17 318 30 336 1.22e-38 141
MsG0580027458.01.T01 MTR_0009s0050 44.000 150 81 2 178 326 1 148 1.35e-38 135
MsG0580027458.01.T01 MTR_2g072910 30.147 272 180 6 4 270 12 278 1.57e-38 138
MsG0580027458.01.T01 MTR_0032s0040 29.674 337 192 12 18 326 37 356 1.62e-38 140
MsG0580027458.01.T01 MTR_5g085330 32.432 296 179 9 42 327 3 287 1.69e-38 139
MsG0580027458.01.T01 MTR_8g062600 28.485 330 215 7 16 333 40 360 2.81e-38 140
MsG0580027458.01.T01 MTR_2g019370 28.981 314 200 9 24 326 12 313 3.39e-38 139
MsG0580027458.01.T01 MTR_7g451860 33.447 293 174 8 41 326 38 316 3.77e-38 139
MsG0580027458.01.T01 MTR_7g047670 33.447 293 174 8 41 326 38 316 3.77e-38 139
MsG0580027458.01.T01 MTR_5g055690 29.323 266 179 6 6 267 10 270 1.12e-37 136
MsG0580027458.01.T01 MTR_4g024660 28.788 330 214 7 16 333 40 360 1.24e-37 138
MsG0580027458.01.T01 MTR_3g026150 32.222 270 171 6 4 267 19 282 1.70e-37 135
MsG0580027458.01.T01 MTR_1g081840 29.355 310 195 8 41 336 50 349 7.97e-37 136
MsG0580027458.01.T01 MTR_1g093120 29.483 329 198 8 17 327 39 351 8.14e-37 136
MsG0580027458.01.T01 MTR_7g056347 29.052 327 205 10 16 327 40 354 1.87e-36 135
MsG0580027458.01.T01 MTR_4g087130 32.680 306 181 8 45 332 33 331 3.71e-36 134
MsG0580027458.01.T01 MTR_6g092620 33.096 281 170 8 42 314 1 271 4.51e-36 132
MsG0580027458.01.T01 MTR_8g063070 27.327 333 219 7 14 333 38 360 1.03e-35 133
MsG0580027458.01.T01 MTR_5g048850 28.253 269 183 6 4 268 8 270 1.35e-35 130
MsG0580027458.01.T01 MTR_1g093140 28.107 338 208 10 12 327 35 359 2.06e-35 132
MsG0580027458.01.T01 MTR_2g083030 30.094 319 199 7 25 336 19 320 2.22e-35 131
MsG0580027458.01.T01 MTR_1g043760 29.769 346 201 10 3 333 28 346 2.34e-35 132
MsG0580027458.01.T01 MTR_2g083000 30.405 296 176 7 41 326 30 305 2.59e-35 131
MsG0580027458.01.T01 MTR_8g469400 29.305 331 198 8 16 333 40 347 4.36e-35 131
MsG0580027458.01.T01 MTR_2g070870 29.197 274 178 7 43 310 27 290 7.96e-35 130
MsG0580027458.01.T01 MTR_2g069060 29.703 303 178 7 41 326 46 330 1.08e-34 130
MsG0580027458.01.T01 MTR_8g041600 30.303 264 156 7 18 267 42 291 1.28e-34 129
MsG0580027458.01.T01 MTR_8g461330 28.169 284 176 8 43 310 26 297 1.40e-34 129
MsG0580027458.01.T01 MTR_1g043775 30.357 336 187 14 18 329 29 341 4.21e-34 128
MsG0580027458.01.T01 MTR_3g088745 29.333 300 195 7 41 327 33 328 3.30e-33 126
MsG0580027458.01.T01 MTR_4g119410 29.538 325 206 9 16 327 40 354 3.58e-33 126
MsG0580027458.01.T01 MTR_1g043810 28.994 338 196 11 3 325 28 336 4.19e-33 125
MsG0580027458.01.T01 MTR_8g009080 33.977 259 153 8 16 266 66 314 4.87e-33 125
MsG0580027458.01.T01 MTR_4g123020 30.479 292 184 8 44 326 20 301 5.26e-33 125
MsG0580027458.01.T01 MTR_3g096500 29.808 312 191 11 41 336 63 362 7.49e-33 125
MsG0580027458.01.T01 MTR_8g009080 34.375 256 150 8 16 263 66 311 8.65e-33 124
MsG0580027458.01.T01 MTR_5g005570 31.399 293 177 9 41 326 34 309 8.84e-33 124
MsG0580027458.01.T01 MTR_0009s0400 44.000 125 69 1 204 327 1 125 1.51e-32 119
MsG0580027458.01.T01 MTR_8g006930 30.154 325 204 10 16 327 40 354 1.75e-32 124
MsG0580027458.01.T01 MTR_7g078010 30.539 334 191 11 16 327 40 354 2.22e-32 124
MsG0580027458.01.T01 MTR_0009s0480 27.138 269 186 6 3 267 6 268 3.37e-32 121
MsG0580027458.01.T01 MTR_1g086550 30.565 301 184 8 44 326 20 313 3.74e-32 123
MsG0580027458.01.T01 MTR_4g096840 29.592 294 187 10 44 326 29 313 3.91e-32 122
MsG0580027458.01.T01 MTR_2g033270 29.492 295 181 10 40 323 15 293 5.62e-32 122
MsG0580027458.01.T01 MTR_1g032140 32.500 320 204 7 19 333 40 352 1.01e-31 122
MsG0580027458.01.T01 MTR_4g021380 30.000 300 191 8 43 328 6 300 5.45e-31 119
MsG0580027458.01.T01 MTR_7g056393 28.824 340 198 10 16 330 40 360 2.25e-30 119
MsG0580027458.01.T01 MTR_1g032250 31.366 322 193 10 19 327 47 353 9.77e-30 117
MsG0580027458.01.T01 MTR_1g043770 27.778 324 204 9 18 327 29 336 1.02e-29 117
MsG0580027458.01.T01 MTR_8g009170 29.249 253 164 5 20 266 39 282 1.09e-29 115
MsG0580027458.01.T01 MTR_8g009180 34.940 166 103 3 167 329 114 277 1.18e-29 115
MsG0580027458.01.T01 MTR_8g009150 27.273 297 173 9 44 327 60 326 1.95e-29 115
MsG0580027458.01.T01 MTR_2g025120 33.913 230 134 9 45 267 5 223 2.29e-29 112
MsG0580027458.01.T01 MTR_4g074130 28.254 315 199 10 24 326 15 314 2.65e-29 115
MsG0580027458.01.T01 MTR_4g132770 40.000 155 79 4 192 332 8 162 3.85e-29 110
MsG0580027458.01.T01 MTR_8g009120 27.946 297 179 7 44 327 60 334 4.10e-29 115
MsG0580027458.01.T01 MTR_1g032220 31.348 319 197 9 19 327 47 353 5.59e-29 115
MsG0580027458.01.T01 MTR_2g068800 28.571 259 142 8 43 287 54 283 2.35e-28 111
MsG0580027458.01.T01 MTR_1g027290 29.276 304 184 10 43 327 28 319 2.84e-28 112
MsG0580027458.01.T01 MTR_1g070110 28.571 245 142 2 83 327 4 215 3.68e-28 110
MsG0580027458.01.T01 MTR_3g083370 31.579 228 142 7 45 267 5 223 1.97e-27 107
MsG0580027458.01.T01 MTR_4g100600 26.230 305 208 7 33 327 3 300 2.47e-27 109
MsG0580027458.01.T01 MTR_3g464530 30.303 264 159 8 44 297 34 282 3.93e-27 109
MsG0580027458.01.T01 MTR_8g102600 28.990 307 183 11 46 327 14 310 5.36e-27 108
MsG0580027458.01.T01 MTR_3g108520 25.914 301 207 5 39 327 2 298 7.74e-27 108
MsG0580027458.01.T01 MTR_7g077670 29.568 301 179 9 43 327 10 293 6.14e-26 105
MsG0580027458.01.T01 MTR_8g093930 26.298 289 198 7 41 318 44 328 2.70e-25 104
MsG0580027458.01.T01 MTR_7g056353 32.948 173 108 2 153 319 150 320 2.96e-25 106
MsG0580027458.01.T01 MTR_3g040410 25.455 275 195 4 53 326 22 287 3.11e-25 103
MsG0580027458.01.T01 MTR_2g069060 30.638 235 145 7 41 267 24 248 6.35e-25 101
MsG0580027458.01.T01 MTR_4g100590 23.762 303 213 6 33 327 3 295 9.24e-25 102
MsG0580027458.01.T01 MTR_8g030880 29.054 296 190 8 42 327 8 293 1.49e-24 102
MsG0580027458.01.T01 MTR_1g043775 30.258 271 146 11 16 266 27 274 8.34e-24 99.8
MsG0580027458.01.T01 MTR_6g088665 29.358 327 202 10 28 332 7 326 2.68e-23 99.0
MsG0580027458.01.T01 MTR_7g078010 30.224 268 152 9 16 267 40 288 4.59e-23 97.8
MsG0580027458.01.T01 MTR_1g043810 28.623 276 156 9 3 266 28 274 8.41e-23 97.4
MsG0580027458.01.T01 MTR_4g011720 24.658 292 191 5 43 319 8 285 8.59e-23 97.1
MsG0580027458.01.T01 MTR_6g088665 28.963 328 203 9 28 332 7 327 8.70e-23 97.4
MsG0580027458.01.T01 MTR_8g093980 26.250 320 193 9 39 336 54 352 9.38e-23 97.8
MsG0580027458.01.T01 MTR_4g021360 26.299 308 197 9 39 328 2 297 2.77e-22 95.9
MsG0580027458.01.T01 MTR_4g011690 25.862 290 191 8 43 319 8 286 2.07e-21 93.2
MsG0580027458.01.T01 MTR_1g027310 24.915 293 169 7 43 327 48 297 4.00e-21 92.4
MsG0580027458.01.T01 MTR_5g025090 25.850 294 200 6 44 333 5 284 5.75e-21 91.7
MsG0580027458.01.T01 MTR_1g043770 27.308 260 162 7 18 266 29 272 1.18e-20 90.9
MsG0580027458.01.T01 MTR_8g102600 30.000 260 147 11 93 327 11 260 1.25e-19 87.8
MsG0580027458.01.T01 MTR_3g464530 28.632 234 142 8 44 267 34 252 1.62e-19 86.7
MsG0580027458.01.T01 MTR_5g027230 25.260 289 194 7 44 326 6 278 2.53e-18 84.3
MsG0580027458.01.T01 MTR_5g025050 25.503 298 198 8 44 333 5 286 3.04e-18 84.3
MsG0580027458.01.T01 MTR_1g043840 25.112 223 143 5 126 334 19 231 1.57e-15 76.6
MsG0580027458.01.T01 MTR_7g090520 24.839 310 208 11 33 331 2 297 3.88e-15 75.5
MsG0580027458.01.T01 MTR_6g035160 34.167 120 75 3 214 329 45 164 7.50e-15 72.0
MsG0580027458.01.T01 MTR_4g100600 25.541 231 156 6 33 253 3 227 2.56e-14 71.6
MsG0580027458.01.T01 MTR_4g011720 23.605 233 163 5 43 267 8 233 9.79e-14 70.9
MsG0580027458.01.T01 MTR_4g094900 24.891 229 131 8 44 242 8 225 1.94e-13 69.7
MsG0580027458.01.T01 MTR_1g011600 24.138 290 201 6 44 318 8 293 4.51e-13 69.3
MsG0580027458.01.T01 MTR_4g100590 21.721 244 178 5 92 327 10 248 8.89e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027458.01.T01 AT5G08640 56.716 335 144 1 1 335 1 334 1.07e-143 409
MsG0580027458.01.T01 AT5G08640 56.716 335 144 1 1 335 1 334 1.07e-143 409
MsG0580027458.01.T01 AT5G63590 50.694 288 141 1 42 328 12 299 4.38e-110 323
MsG0580027458.01.T01 AT5G63600 42.089 316 172 3 16 331 10 314 1.68e-94 284
MsG0580027458.01.T01 AT5G63600 41.956 317 172 4 16 331 10 315 2.55e-93 281
MsG0580027458.01.T01 AT5G43935 44.444 297 136 4 43 334 18 290 1.03e-92 278
MsG0580027458.01.T01 AT4G22880 41.449 345 180 7 3 331 4 342 2.48e-85 261
MsG0580027458.01.T01 AT4G22880 41.449 345 180 7 3 331 4 342 2.48e-85 261
MsG0580027458.01.T01 AT4G22880 41.449 345 180 7 3 331 4 342 2.48e-85 261
MsG0580027458.01.T01 AT5G63595 42.688 253 123 2 45 297 26 256 1.53e-73 229
MsG0580027458.01.T01 AT5G05600 36.070 341 206 5 3 336 24 359 1.26e-68 219
MsG0580027458.01.T01 AT2G38240 35.061 328 201 6 6 326 9 331 1.28e-67 216
MsG0580027458.01.T01 AT5G63580 46.222 225 119 2 44 268 19 241 6.19e-66 208
MsG0580027458.01.T01 AT5G63580 46.847 222 116 2 44 265 19 238 8.64e-66 208
MsG0580027458.01.T01 AT3G11180 35.030 334 199 6 3 326 53 378 1.98e-65 212
MsG0580027458.01.T01 AT3G11180 35.030 334 199 6 3 326 53 378 2.12e-65 212
MsG0580027458.01.T01 AT3G21420 36.765 340 199 7 1 328 9 344 5.77e-65 209
MsG0580027458.01.T01 AT4G10500 35.144 313 191 6 20 326 20 326 1.99e-64 207
MsG0580027458.01.T01 AT4G10490 35.535 318 186 8 20 327 18 326 5.13e-63 204
MsG0580027458.01.T01 AT1G49390 33.851 322 201 6 16 328 15 333 3.62e-61 199
MsG0580027458.01.T01 AT4G16330 34.551 301 186 5 39 336 62 354 3.67e-61 200
MsG0580027458.01.T01 AT5G20400 36.149 296 180 5 41 330 42 334 1.02e-59 196
MsG0580027458.01.T01 AT1G17020 32.609 322 205 5 18 330 27 345 3.58e-59 194
MsG0580027458.01.T01 AT5G54000 33.846 325 198 8 16 326 15 336 1.46e-57 190
MsG0580027458.01.T01 AT5G24530 34.921 315 192 7 18 326 13 320 2.03e-56 187
MsG0580027458.01.T01 AT1G17010 31.611 329 215 7 6 327 14 339 3.20e-56 187
MsG0580027458.01.T01 AT1G49390 37.097 248 152 3 74 320 1 245 1.11e-55 182
MsG0580027458.01.T01 AT3G19010 36.334 311 170 9 43 333 27 329 1.67e-55 184
MsG0580027458.01.T01 AT3G19010 36.334 311 170 9 43 333 27 329 1.67e-55 184
MsG0580027458.01.T01 AT3G55970 33.631 336 206 7 3 326 11 341 2.64e-55 184
MsG0580027458.01.T01 AT5G20550 34.694 294 181 6 42 327 43 333 4.28e-55 184
MsG0580027458.01.T01 AT4G25300 32.381 315 205 5 18 327 26 337 7.77e-55 183
MsG0580027458.01.T01 AT2G36690 32.229 332 204 8 9 327 21 344 1.63e-54 182
MsG0580027458.01.T01 AT2G36690 32.229 332 204 8 9 327 21 344 1.63e-54 182
MsG0580027458.01.T01 AT1G78550 32.063 315 205 4 18 327 27 337 2.94e-54 181
MsG0580027458.01.T01 AT4G25310 33.028 327 207 6 12 333 21 340 8.08e-54 180
MsG0580027458.01.T01 AT3G13610 32.390 318 206 5 13 327 31 342 6.10e-53 178
MsG0580027458.01.T01 AT2G44800 33.121 314 199 7 20 327 27 335 8.27e-53 178
MsG0580027458.01.T01 AT3G60290 35.759 316 179 11 31 336 44 345 1.32e-52 177
MsG0580027458.01.T01 AT5G54000 36.293 259 156 4 74 326 1 256 1.86e-52 174
MsG0580027458.01.T01 AT5G05600 34.559 272 166 5 3 267 24 290 2.01e-51 172
MsG0580027458.01.T01 AT1G55290 33.103 290 179 5 44 327 62 342 3.11e-50 171
MsG0580027458.01.T01 AT3G12900 33.544 316 195 8 18 327 31 337 9.66e-50 170
MsG0580027458.01.T01 AT4G16330 35.409 257 151 5 86 336 1 248 2.15e-49 166
MsG0580027458.01.T01 AT3G51240 31.864 295 189 5 18 305 13 302 7.98e-49 167
MsG0580027458.01.T01 AT5G43440 33.866 313 182 8 35 334 53 353 1.23e-48 167
MsG0580027458.01.T01 AT1G15550 33.333 291 184 5 44 330 57 341 1.43e-48 167
MsG0580027458.01.T01 AT1G78550 34.109 258 165 3 71 327 6 259 1.40e-47 162
MsG0580027458.01.T01 AT3G19000 34.564 298 167 6 43 319 31 321 1.82e-47 164
MsG0580027458.01.T01 AT3G19010 34.084 311 147 9 43 333 27 299 2.69e-47 162
MsG0580027458.01.T01 AT1G06640 32.036 334 187 13 16 326 33 349 3.92e-47 163
MsG0580027458.01.T01 AT1G06650 33.784 296 173 10 44 326 64 349 1.02e-46 162
MsG0580027458.01.T01 AT5G43450 32.609 322 188 9 20 326 35 342 1.79e-46 161
MsG0580027458.01.T01 AT1G03410 34.828 290 170 9 41 319 54 335 1.43e-45 159
MsG0580027458.01.T01 AT1G03410 34.828 290 170 9 41 319 91 372 1.54e-45 160
MsG0580027458.01.T01 AT1G62380 33.219 292 177 8 42 327 5 284 5.20e-44 154
MsG0580027458.01.T01 AT5G07480 32.333 300 178 7 44 327 44 334 1.06e-43 154
MsG0580027458.01.T01 AT1G06645 31.385 325 194 11 18 326 48 359 4.60e-43 153
MsG0580027458.01.T01 AT1G12010 33.220 295 177 11 40 327 3 284 6.57e-43 151
MsG0580027458.01.T01 AT1G77330 31.699 306 181 8 42 333 1 292 7.71e-43 150
MsG0580027458.01.T01 AT5G59540 31.544 298 181 7 42 326 59 346 9.74e-43 152
MsG0580027458.01.T01 AT2G30830 32.180 289 176 8 42 319 52 331 2.27e-42 150
MsG0580027458.01.T01 AT1G04350 31.894 301 183 9 37 326 51 340 4.21e-42 150
MsG0580027458.01.T01 AT3G55970 32.852 277 169 7 3 267 11 282 5.63e-42 148
MsG0580027458.01.T01 AT1G80340 31.987 297 192 5 44 336 50 340 6.53e-42 149
MsG0580027458.01.T01 AT5G59530 31.879 298 181 8 42 326 56 344 1.01e-41 149
MsG0580027458.01.T01 AT3G61400 32.566 304 181 11 36 326 59 351 1.69e-41 149
MsG0580027458.01.T01 AT4G25420 29.560 318 195 7 18 318 38 343 3.43e-41 148
MsG0580027458.01.T01 AT1G04380 31.525 295 180 9 42 326 43 325 8.99e-41 146
MsG0580027458.01.T01 AT5G51810 28.875 329 194 7 18 328 40 346 1.37e-40 146
MsG0580027458.01.T01 AT1G06620 31.902 326 185 10 20 326 38 345 1.45e-40 146
MsG0580027458.01.T01 AT1G80330 30.421 309 193 8 34 330 39 337 1.58e-40 145
MsG0580027458.01.T01 AT4G21690 30.793 328 196 11 17 330 26 336 1.92e-40 145
MsG0580027458.01.T01 AT1G03400 32.990 291 177 8 42 326 54 332 3.11e-40 145
MsG0580027458.01.T01 AT3G19010 34.959 246 133 8 43 268 27 265 3.48e-40 143
MsG0580027458.01.T01 AT2G30840 30.565 301 195 8 31 326 51 342 9.43e-40 144
MsG0580027458.01.T01 AT1G02400 30.573 314 203 8 23 326 1 309 2.25e-39 142
MsG0580027458.01.T01 AT3G19000 32.677 254 143 6 43 275 31 277 2.28e-38 138
MsG0580027458.01.T01 AT1G05010 34.564 298 166 12 45 327 5 288 2.31e-38 139
MsG0580027458.01.T01 AT1G60980 30.565 301 189 6 42 326 55 351 1.53e-37 138
MsG0580027458.01.T01 AT5G07200 31.046 306 190 7 20 311 37 335 1.70e-37 138
MsG0580027458.01.T01 AT1G78440 27.946 297 188 10 44 326 18 302 4.43e-37 136
MsG0580027458.01.T01 AT5G43440 35.124 242 135 6 35 266 53 282 5.54e-37 134
MsG0580027458.01.T01 AT3G51240 32.883 222 143 3 86 305 1 218 4.24e-36 132
MsG0580027458.01.T01 AT2G30840 30.565 301 189 9 31 326 51 336 4.34e-36 134
MsG0580027458.01.T01 AT4G25310 29.052 327 192 7 12 333 21 312 7.60e-35 130
MsG0580027458.01.T01 AT1G03400 30.094 319 177 9 42 326 54 360 1.13e-34 130
MsG0580027458.01.T01 AT5G43450 32.046 259 150 7 20 266 35 279 1.42e-34 128
MsG0580027458.01.T01 AT4G25300 34.783 184 118 2 145 327 61 243 1.48e-34 127
MsG0580027458.01.T01 AT1G44090 29.073 313 190 8 42 336 61 359 1.49e-34 130
MsG0580027458.01.T01 AT1G06640 31.159 276 156 10 16 273 33 292 1.59e-34 129
MsG0580027458.01.T01 AT5G12270 31.271 291 187 7 44 327 56 340 2.29e-34 129
MsG0580027458.01.T01 AT5G07480 33.028 218 137 4 116 327 11 225 2.66e-34 126
MsG0580027458.01.T01 AT1G06640 31.481 270 151 10 16 267 33 286 3.22e-34 127
MsG0580027458.01.T01 AT1G06650 34.052 232 136 8 44 267 64 286 5.52e-34 127
MsG0580027458.01.T01 AT4G21200 30.719 306 187 8 29 326 25 313 1.02e-32 124
MsG0580027458.01.T01 AT1G47990 27.184 309 197 9 33 326 4 299 1.51e-32 124
MsG0580027458.01.T01 AT1G30040 28.669 293 188 9 44 326 31 312 2.29e-32 124
MsG0580027458.01.T01 AT2G19590 29.693 293 183 8 41 327 8 283 6.85e-32 121
MsG0580027458.01.T01 AT1G50960 29.022 317 204 6 17 326 12 314 8.53e-32 122
MsG0580027458.01.T01 AT2G25450 29.514 288 182 8 44 319 55 333 4.36e-31 120
MsG0580027458.01.T01 AT1G06620 32.432 259 149 7 20 266 38 282 9.86e-31 118
MsG0580027458.01.T01 AT2G34555 28.966 290 190 10 44 326 27 307 1.34e-30 119
MsG0580027458.01.T01 AT5G59540 30.932 236 143 5 42 267 59 284 5.38e-30 116
MsG0580027458.01.T01 AT1G04380 31.489 235 142 7 42 269 43 265 7.35e-30 115
MsG0580027458.01.T01 AT4G25420 28.464 267 162 7 18 267 38 292 4.67e-29 114
MsG0580027458.01.T01 AT2G30840 30.252 238 155 5 31 266 51 279 1.04e-28 113
MsG0580027458.01.T01 AT5G58660 27.273 308 193 8 17 298 4 306 1.63e-28 113
MsG0580027458.01.T01 AT5G51810 27.675 271 161 6 18 270 40 293 3.43e-28 111
MsG0580027458.01.T01 AT3G61400 31.950 241 144 8 36 267 59 288 5.87e-28 110
MsG0580027458.01.T01 AT4G23340 28.053 303 183 6 42 327 8 292 8.30e-28 111
MsG0580027458.01.T01 AT3G47190 26.510 298 186 9 42 326 30 307 1.02e-25 105
MsG0580027458.01.T01 AT1G02400 28.516 256 169 7 23 269 1 251 2.36e-25 103
MsG0580027458.01.T01 AT2G19590 29.811 265 156 8 71 327 26 268 7.72e-25 102
MsG0580027458.01.T01 AT4G22870 48.454 97 49 1 236 331 2 98 1.76e-24 96.3
MsG0580027458.01.T01 AT1G14130 27.957 279 187 5 44 319 9 276 5.81e-24 100
MsG0580027458.01.T01 AT3G50210 26.441 295 177 8 44 305 8 295 6.28e-24 100
MsG0580027458.01.T01 AT3G50210 26.441 295 177 8 44 305 8 295 6.28e-24 100
MsG0580027458.01.T01 AT3G50210 26.441 295 177 8 44 305 8 295 6.28e-24 100
MsG0580027458.01.T01 AT5G58660 26.087 276 174 7 17 267 4 274 5.62e-23 97.1
MsG0580027458.01.T01 AT4G22870 48.315 89 45 1 244 331 51 139 3.53e-22 91.7
MsG0580027458.01.T01 AT3G49630 26.316 285 195 5 55 328 29 309 4.89e-22 95.1
MsG0580027458.01.T01 AT3G49630 26.316 285 195 5 55 328 33 313 5.06e-22 95.5
MsG0580027458.01.T01 AT3G46500 26.510 298 200 8 44 327 17 309 8.95e-22 94.4
MsG0580027458.01.T01 AT1G30040 28.205 234 147 9 44 267 31 253 1.62e-21 92.8
MsG0580027458.01.T01 AT1G52820 25.784 287 196 6 42 319 10 288 1.90e-21 93.6
MsG0580027458.01.T01 AT3G49620 26.354 277 177 7 48 305 48 316 4.95e-21 92.8
MsG0580027458.01.T01 AT1G14120 28.328 293 179 11 37 319 4 275 9.30e-20 88.6
MsG0580027458.01.T01 AT1G14120 28.328 293 179 11 37 319 4 275 9.30e-20 88.6
MsG0580027458.01.T01 AT1G14120 28.328 293 179 11 37 319 4 275 9.30e-20 88.6
MsG0580027458.01.T01 AT4G23340 32.022 178 105 4 161 327 2 174 4.95e-19 84.3
MsG0580027458.01.T01 AT4G16770 26.141 241 151 6 39 260 17 249 5.44e-18 82.8
MsG0580027458.01.T01 AT3G46490 24.437 311 197 8 44 327 17 316 1.29e-17 82.8
MsG0580027458.01.T01 AT4G16765 28.889 180 116 5 149 318 50 227 2.27e-17 80.5
MsG0580027458.01.T01 AT4G16765 28.042 189 124 5 149 327 50 236 3.77e-17 80.1
MsG0580027458.01.T01 AT4G16765 28.042 189 124 5 149 327 50 236 3.77e-17 80.1
MsG0580027458.01.T01 AT4G16765 28.042 189 124 5 149 327 50 236 3.77e-17 80.1
MsG0580027458.01.T01 AT3G49630 28.571 182 125 3 149 328 62 240 6.99e-17 79.7
MsG0580027458.01.T01 AT3G50210 30.519 154 100 3 149 296 52 204 8.59e-17 79.3
MsG0580027458.01.T01 AT1G28030 26.899 316 196 11 40 336 9 308 1.14e-16 80.1
MsG0580027458.01.T01 AT1G52800 25.556 270 167 8 43 294 9 262 3.34e-16 78.6
MsG0580027458.01.T01 AT3G46500 25.746 268 180 8 44 297 17 279 1.44e-15 76.6
MsG0580027458.01.T01 AT1G35190 25.000 304 177 10 46 327 14 288 1.48e-15 76.6
MsG0580027458.01.T01 AT4G03070 23.510 302 211 8 39 328 9 302 2.30e-15 76.3
MsG0580027458.01.T01 AT1G35190 25.574 305 197 9 46 327 14 311 4.48e-15 75.5
MsG0580027458.01.T01 AT3G46500 32.479 117 73 2 216 327 58 173 1.29e-14 71.6
MsG0580027458.01.T01 AT3G46500 27.513 189 124 6 149 327 50 235 2.63e-14 72.0
MsG0580027458.01.T01 AT3G46500 27.513 189 124 6 149 327 50 235 2.63e-14 72.0
MsG0580027458.01.T01 AT3G46480 33.333 117 72 2 216 327 154 269 1.59e-13 70.5
MsG0580027458.01.T01 AT3G46490 23.297 279 176 8 44 294 17 285 1.55e-12 67.8
MsG0580027458.01.T01 AT4G03050 32.759 116 76 2 214 327 271 386 1.82e-12 68.2
MsG0580027458.01.T01 AT4G03050 32.759 116 76 2 214 327 271 386 1.82e-12 68.2
MsG0580027458.01.T01 AT2G06960 27.273 154 89 5 191 336 10 148 2.72e-12 64.3
MsG0580027458.01.T01 AT1G52820 23.830 235 162 6 42 267 10 236 9.15e-12 65.1
MsG0580027458.01.T01 AT4G16765 28.889 135 87 3 149 274 50 184 4.92e-11 61.6

Find 87 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGTTCCTGATCTTGTTCT+AGG 0.155967 5:+61344147 MsG0580027458.01.T01:CDS
ATCATTTGTTTCACATTATA+TGG 0.203649 5:+61341016 MsG0580027458.01.T01:CDS
CCTTGAACTGTTGTTGTTCC+TGG 0.237551 5:-61340715 None:intergenic
AAGATAATCCTCAAATTTCT+TGG 0.256727 5:-61345356 None:intergenic
AAGTAACAATGGAGGTTCTA+AGG 0.267350 5:+61340614 MsG0580027458.01.T01:exon
CCAATTTCGTGTTCTGGCTT+TGG 0.271299 5:-61345286 None:intergenic
GATTGTAGATGTAGCATCTT+TGG 0.279125 5:-61340659 None:intergenic
TAATGGAAGCAAGTACAAAA+TGG 0.302252 5:+61340803 MsG0580027458.01.T01:CDS
AAAAGTTTGTCAACTGGTCT+TGG 0.310609 5:+61344042 MsG0580027458.01.T01:CDS
TGAGGACCAATTTCGTGTTC+TGG 0.320265 5:-61345292 None:intergenic
ATGTGAATGACAAGGGCATT+AGG 0.322438 5:-61344276 None:intergenic
CTACAAACCCTGCTTCTTAC+AGG 0.328341 5:+61341070 MsG0580027458.01.T01:CDS
ACCTGTTGGGTCTGATTCAT+TGG 0.330054 5:+61340939 MsG0580027458.01.T01:CDS
TTCTCTTGGTTAACCAACTT+TGG 0.334280 5:-61345316 None:intergenic
ACTGAGCAATGGAAAATATA+AGG 0.341279 5:+61345198 MsG0580027458.01.T01:CDS
TAACTTCATTTGGAATTTCA+TGG 0.342482 5:-61340846 None:intergenic
CCAAAGCCAGAACACGAAAT+TGG 0.348955 5:+61345286 MsG0580027458.01.T01:CDS
AATTTCTTGGTCTTGTACTT+TGG 0.356835 5:-61345343 None:intergenic
CACCTCATTGGAGACCAAAA+TGG 0.364761 5:-61344202 None:intergenic
TTCTTGGTCTTGTACTTTGG+TGG 0.380965 5:-61345340 None:intergenic
GGGTTGCTGAAATCTATTAT+AGG 0.383741 5:-61340754 None:intergenic
TGTACTTTGGTGGATTCTCT+TGG 0.391174 5:-61345330 None:intergenic
AAAGTTTGTCAACTGGTCTT+GGG 0.397315 5:+61344043 MsG0580027458.01.T01:CDS
TGTGAATGACAAGGGCATTA+GGG 0.398910 5:-61344275 None:intergenic
TAGAACCTCCATTGTTACTT+TGG 0.407103 5:-61340611 None:intergenic
AATGGAAGCAAGTACAAAAT+GGG 0.407140 5:+61340804 MsG0580027458.01.T01:CDS
CTGTAAGAAGCAGGGTTTGT+AGG 0.411623 5:-61341069 None:intergenic
AGGGAGGTGAATGAGGAATA+TGG 0.426667 5:+61343985 MsG0580027458.01.T01:intron
TTTGGTCTCCAATGAGGTGC+AGG 0.430384 5:+61344206 MsG0580027458.01.T01:CDS
CATGAACTCAAGGAAGTTGC+AGG 0.432295 5:+61344075 MsG0580027458.01.T01:CDS
CAATCCCATCCATGTTCCTT+AGG 0.434034 5:+61340677 MsG0580027458.01.T01:CDS
CATTCACATTGGTGACCAAA+TGG 0.441391 5:+61344290 MsG0580027458.01.T01:CDS
CTATTCAAAAGTTTGTCAAC+TGG 0.450928 5:+61344036 MsG0580027458.01.T01:CDS
TATATATACATACCTCCATT+TGG 0.456033 5:-61344305 None:intergenic
AGGTTAATGGGAAGAAAGGT+TGG 0.459858 5:+61340989 MsG0580027458.01.T01:CDS
GAGGTTATTGCTAAACCTGT+TGG 0.467337 5:+61340925 MsG0580027458.01.T01:CDS
GTACAAGACCAAGAAATTTG+AGG 0.467882 5:+61345348 MsG0580027458.01.T01:CDS
TTGAAGACCCTGCACCTCAT+TGG 0.473041 5:-61344214 None:intergenic
TAAACATACCTGTAAGAAGC+AGG 0.478404 5:-61341078 None:intergenic
TTCTTGCAGGGAGGTGAATG+AGG 0.483035 5:+61343978 MsG0580027458.01.T01:intron
AGGTTATTGCTAAACCTGTT+GGG 0.485082 5:+61340926 MsG0580027458.01.T01:CDS
TCCAATGAATCAGACCCAAC+AGG 0.488108 5:-61340940 None:intergenic
AAAGAGGTTAATGGGAAGAA+AGG 0.490458 5:+61340985 MsG0580027458.01.T01:CDS
GTAGCTATAAGTTCTAAAGT+TGG 0.498015 5:+61345540 MsG0580027458.01.T01:three_prime_UTR
CCAGGAACAACAACAGTTCA+AGG 0.510650 5:+61340715 MsG0580027458.01.T01:CDS
TTAATAAGATCCCTCAGTAA+AGG 0.513703 5:+61345389 MsG0580027458.01.T01:CDS
GTTGGGTCTGATTCATTGGA+AGG 0.520529 5:+61340943 MsG0580027458.01.T01:CDS
TGGTTAACCAACTTTGGATG+AGG 0.521368 5:-61345310 None:intergenic
AAACGGTAATTAATGGAAGA+AGG 0.523112 5:-61341042 None:intergenic
GGCACACCTAGAACAAGATC+AGG 0.525900 5:-61344153 None:intergenic
AGTAACAATGGAGGTTCTAA+GGG 0.528023 5:+61340615 MsG0580027458.01.T01:exon
TCTGATTCATTGGAAGGGTA+TGG 0.532275 5:+61340949 MsG0580027458.01.T01:CDS
AGCATTTCTTCCTTTACTGA+GGG 0.532988 5:-61345399 None:intergenic
GGCTTTGGCTCTATGAACAC+TGG 0.534226 5:-61345271 None:intergenic
AATTGGTCCTCATCCAAAGT+TGG 0.537364 5:+61345303 MsG0580027458.01.T01:CDS
CCTAGAACAAGATCAGGAAC+TGG 0.541583 5:-61344147 None:intergenic
CTGACCTAAGGAACATGGAT+GGG 0.544054 5:-61340681 None:intergenic
GTGACTCAGTTTCTGACCTA+AGG 0.549175 5:-61340693 None:intergenic
GGTTAATGGGAAGAAAGGTT+GGG 0.553972 5:+61340990 MsG0580027458.01.T01:CDS
TTGGGTCTGATTCATTGGAA+GGG 0.562176 5:+61340944 MsG0580027458.01.T01:CDS
TTGGTCTCCAATGAGGTGCA+GGG 0.562491 5:+61344207 MsG0580027458.01.T01:CDS
AAGCCTCTAGAGATGGTCAA+TGG 0.566432 5:+61344235 MsG0580027458.01.T01:CDS
GAGCATTTCTTCCTTTACTG+AGG 0.574891 5:-61345400 None:intergenic
TCTGACCTAAGGAACATGGA+TGG 0.593310 5:-61340682 None:intergenic
TGGCAAGTACCTACGTGAAG+TGG 0.602357 5:+61344005 MsG0580027458.01.T01:CDS
GCTTGAAGAACATGAACTCA+AGG 0.605331 5:+61344065 MsG0580027458.01.T01:CDS
AAACATACCTGTAAGAAGCA+GGG 0.606412 5:-61341077 None:intergenic
GGTCTTCAAGCCTCTAGAGA+TGG 0.611713 5:+61344228 MsG0580027458.01.T01:CDS
AATGCCCTTGTCATTCACAT+TGG 0.619150 5:+61344279 MsG0580027458.01.T01:CDS
ACAAGATCAGGAACTGGACA+TGG 0.629971 5:-61344141 None:intergenic
AGTTTCTGACCTAAGGAACA+TGG 0.632344 5:-61340686 None:intergenic
AGATCAGGAACTGGACATGG+TGG 0.638247 5:-61344138 None:intergenic
AGTTCAAGGTGTGAAACTTG+AGG 0.638988 5:+61340729 MsG0580027458.01.T01:CDS
TATCAAATGATCGTGTCATG+TGG 0.639891 5:+61345494 MsG0580027458.01.T01:three_prime_UTR
GTCACCAATGTGAATGACAA+GGG 0.645586 5:-61344283 None:intergenic
AGGTCAGAAACTGAGTCACC+AGG 0.646383 5:+61340697 MsG0580027458.01.T01:CDS
AGAAAAGACATATCTGTGTG+TGG 0.647390 5:-61344177 None:intergenic
ATGGAAGCAAGTACAAAATG+GGG 0.648572 5:+61340805 MsG0580027458.01.T01:CDS
GGTCACCAATGTGAATGACA+AGG 0.648978 5:-61344284 None:intergenic
GATCAGGAACTGGACATGGT+GGG 0.653909 5:-61344137 None:intergenic
GAACTCAAGGAAGTTGCAGG+TGG 0.656127 5:+61344078 MsG0580027458.01.T01:CDS
ATACCATTGACCATCTCTAG+AGG 0.666331 5:-61344238 None:intergenic
TCACATTGGTGACCAAATGG+AGG 0.676061 5:+61344293 MsG0580027458.01.T01:CDS
CGGTAATTAATGGAAGAAGG+TGG 0.685706 5:-61341039 None:intergenic
AAAGACATATCTGTGTGTGG+AGG 0.700387 5:-61344174 None:intergenic
AAGATGAGACAAGAATGTCG+TGG 0.735854 5:+61345248 MsG0580027458.01.T01:CDS
GTTTGTCTGCCACTTCACGT+AGG 0.737897 5:-61344014 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATACAAAATGAAATAA+TGG + Chr5:61340786-61340805 MsG0580027458.01.T01:CDS 10.0%
!! TATATAAAATCAAATGTTAT+TGG - Chr5:61341712-61341731 None:intergenic 10.0%
!! TCAATAAACATTTAATATTT+CGG - Chr5:61343132-61343151 None:intergenic 10.0%
!!! ACAATGAATATATTTTTATA+TGG - Chr5:61341405-61341424 None:intergenic 10.0%
!!! TTTAATTATAAATTTTCACT+AGG + Chr5:61345584-61345603 MsG0580027458.01.T01:three_prime_UTR 10.0%
!!! TTTATTTTATAAAACCAATT+AGG + Chr5:61343510-61343529 MsG0580027458.01.T01:intron 10.0%
!! AATTATAAGTAGAGTAATTA+AGG - Chr5:61341166-61341185 None:intergenic 15.0%
!! ATATTGTTGTATAATTAACT+TGG + Chr5:61344465-61344484 MsG0580027458.01.T01:intron 15.0%
!! GTAGCAATTATTATATATAT+TGG + Chr5:61344807-61344826 MsG0580027458.01.T01:intron 15.0%
!! TAAATATGTAAACATAAGTT+AGG + Chr5:61342092-61342111 MsG0580027458.01.T01:intron 15.0%
!! TTATCTAAACTTAATCTTTA+AGG + Chr5:61343163-61343182 MsG0580027458.01.T01:intron 15.0%
!! TTTATCTTCAATACTAAATA+TGG - Chr5:61343190-61343209 None:intergenic 15.0%
!!! AACTTTTTTATAACTTCATT+TGG - Chr5:61340859-61340878 None:intergenic 15.0%
!!! AGGTTATTATTATTTTGATT+TGG + Chr5:61341292-61341311 MsG0580027458.01.T01:intron 15.0%
!!! AGTAATTAAGTGATATTTTA+CGG + Chr5:61343822-61343841 MsG0580027458.01.T01:intron 15.0%
!!! TATTTATTTTTCTTTCTGAA+AGG + Chr5:61342434-61342453 MsG0580027458.01.T01:intron 15.0%
!!! TTTTCTTTTTCTAAACAAAA+AGG - Chr5:61343231-61343250 None:intergenic 15.0%
!! AAAAAAAACCAAAGTAACAA+TGG + Chr5:61340603-61340622 MsG0580027458.01.T01:exon 20.0%
!! AAACATTTAATATTTCGGTT+AGG - Chr5:61343127-61343146 None:intergenic 20.0%
!! AACATTTAATATTTCGGTTA+GGG - Chr5:61343126-61343145 None:intergenic 20.0%
!! AATTGTTATAGTTCTTTAGA+GGG - Chr5:61341373-61341392 None:intergenic 20.0%
!! ATAAAAAAGTTACAAAGTGT+TGG + Chr5:61340868-61340887 MsG0580027458.01.T01:CDS 20.0%
!! ATAAAAAGAAACAAACTTAG+AGG + Chr5:61343618-61343637 MsG0580027458.01.T01:intron 20.0%
!! ATCATTTGTTTCACATTATA+TGG + Chr5:61341016-61341035 MsG0580027458.01.T01:CDS 20.0%
!! TAATTGTTATAGTTCTTTAG+AGG - Chr5:61341374-61341393 None:intergenic 20.0%
!! TACTCTAACAATAAAATACA+AGG - Chr5:61341190-61341209 None:intergenic 20.0%
!! TCATATAATAAACACATGTA+AGG - Chr5:61343003-61343022 None:intergenic 20.0%
!! TTAGTTTCTCATAATCAATT+GGG - Chr5:61345133-61345152 None:intergenic 20.0%
!! TTATATATCCTTGTGATTAA+CGG + Chr5:61341816-61341835 MsG0580027458.01.T01:intron 20.0%
!!! AAACTTTAAGAATCTTTTTC+TGG + Chr5:61342118-61342137 MsG0580027458.01.T01:intron 20.0%
!!! ATTAGTTTCTCATAATCAAT+TGG - Chr5:61345134-61345153 None:intergenic 20.0%
!!! ATTTTCTTACCGTATAAATA+AGG - Chr5:61342314-61342333 None:intergenic 20.0%
!!! GACTCATTTTTATTGTTATT+AGG - Chr5:61344974-61344993 None:intergenic 20.0%
!!! TTTGTATTTTTGCTTTATCA+GGG - Chr5:61340777-61340796 None:intergenic 20.0%
!!! TTTTCTTACCGTATAAATAA+GGG - Chr5:61342313-61342332 None:intergenic 20.0%
!!! TTTTGTATTTTTGCTTTATC+AGG - Chr5:61340778-61340797 None:intergenic 20.0%
!!! TTTTTTTCTTCTTTCTTTTG+TGG - Chr5:61340588-61340607 None:intergenic 20.0%
! AAACTTCAAAAAGAGGTTAA+TGG + Chr5:61340976-61340995 MsG0580027458.01.T01:CDS 25.0%
! AAAGTTGTATGTAGAGAAAA+AGG + Chr5:61342345-61342364 MsG0580027458.01.T01:intron 25.0%
! AACTTCAAAAAGAGGTTAAT+GGG + Chr5:61340977-61340996 MsG0580027458.01.T01:CDS 25.0%
! AAGATAATCCTCAAATTTCT+TGG - Chr5:61345359-61345378 None:intergenic 25.0%
! ACAAGTATTATGAAACTGTT+TGG + Chr5:61341877-61341896 MsG0580027458.01.T01:intron 25.0%
! ACATTTAATATTTCGGTTAG+GGG - Chr5:61343125-61343144 None:intergenic 25.0%
! ACGTTGTTTGTTTATGTAAA+TGG - Chr5:61343030-61343049 None:intergenic 25.0%
! AGAAATAAGTCAATAACTCT+AGG + Chr5:61343067-61343086 MsG0580027458.01.T01:intron 25.0%
! ATATTTGGTTATTAAGGAAC+CGG + Chr5:61345011-61345030 MsG0580027458.01.T01:intron 25.0%
! CAAGTATTATGAAACTGTTT+GGG + Chr5:61341878-61341897 MsG0580027458.01.T01:intron 25.0%
! CCAAATCAATAAAAACCAAT+AGG + Chr5:61343759-61343778 MsG0580027458.01.T01:intron 25.0%
! GAAAATTCAAACTCATAAAG+AGG - Chr5:61342829-61342848 None:intergenic 25.0%
! GATTTACTCAATATAGTAGT+AGG - Chr5:61343103-61343122 None:intergenic 25.0%
! TATATATACATACCTCCATT+TGG - Chr5:61344308-61344327 None:intergenic 25.0%
! TCTCTCTAGATGAAAAATTT+CGG + Chr5:61342636-61342655 MsG0580027458.01.T01:intron 25.0%
! TGTTTGTTTATGTAAATGGT+TGG - Chr5:61343026-61343045 None:intergenic 25.0%
! TTTGTTGAAAAACAAAGGAA+GGG + Chr5:61344841-61344860 MsG0580027458.01.T01:intron 25.0%
!! AAGATTTTCTTGGTTACAAT+TGG - Chr5:61342783-61342802 None:intergenic 25.0%
!! AATGTTTAACAAGTCCTTTT+TGG + Chr5:61344629-61344648 MsG0580027458.01.T01:intron 25.0%
!! ATTTTATAGATACTGAGCAA+TGG + Chr5:61345187-61345206 MsG0580027458.01.T01:intron 25.0%
!! CTTGTTCTTGTTAAGTATTT+TGG + Chr5:61343307-61343326 MsG0580027458.01.T01:intron 25.0%
!! TAACTTCATTTGGAATTTCA+TGG - Chr5:61340849-61340868 None:intergenic 25.0%
!! TAATGTCACCCTTATTTATA+CGG + Chr5:61342302-61342321 MsG0580027458.01.T01:intron 25.0%
!! TACATTCTTTTTGTTAGAGT+AGG + Chr5:61341272-61341291 MsG0580027458.01.T01:intron 25.0%
!! TATGTCTTTTCTTACCATTT+TGG + Chr5:61344188-61344207 MsG0580027458.01.T01:CDS 25.0%
!! TCTAAAGAGAAGTAATTTTG+TGG + Chr5:61345421-61345440 MsG0580027458.01.T01:three_prime_UTR 25.0%
!! TTCTGAAAGGTTTATATTAG+TGG + Chr5:61342447-61342466 MsG0580027458.01.T01:intron 25.0%
!! TTTCATATCTATTTGTTGAC+CGG - Chr5:61345033-61345052 None:intergenic 25.0%
!! TTTTTCTAAACAAAAAGGAG+AGG - Chr5:61343226-61343245 None:intergenic 25.0%
!!! AAAAAGGACTTGTTAAACAT+TGG - Chr5:61344630-61344649 None:intergenic 25.0%
!!! ACTTTTTATAAGATTAGTCC+TGG - Chr5:61343794-61343813 None:intergenic 25.0%
!!! ATATCGGTTTATTATTTTGC+AGG - Chr5:61344543-61344562 None:intergenic 25.0%
!!! CCTATTGGTTTTTATTGATT+TGG - Chr5:61343762-61343781 None:intergenic 25.0%
!!! GAGTTATTGACTTATTTCTA+TGG - Chr5:61343066-61343085 None:intergenic 25.0%
!!! TTATTGACTTATTTCTATGG+AGG - Chr5:61343063-61343082 None:intergenic 25.0%
AAAAACCAAAGTAACAATGG+AGG + Chr5:61340606-61340625 MsG0580027458.01.T01:exon 30.0%
AAACGGTAATTAATGGAAGA+AGG - Chr5:61341045-61341064 None:intergenic 30.0%
AATGGAAGCAAGTACAAAAT+GGG + Chr5:61340804-61340823 MsG0580027458.01.T01:CDS 30.0%
ACTGAGCAATGGAAAATATA+AGG + Chr5:61345198-61345217 MsG0580027458.01.T01:CDS 30.0%
AGAGAAATTCAAGGGATATT+TGG + Chr5:61344996-61345015 MsG0580027458.01.T01:intron 30.0%
AGGCTCTTTATAACAATACA+TGG - Chr5:61342589-61342608 None:intergenic 30.0%
ATAAACAAACAACGTGTACT+TGG + Chr5:61343035-61343054 MsG0580027458.01.T01:intron 30.0%
ATAAACCGATATGTAATCTC+AGG + Chr5:61344551-61344570 MsG0580027458.01.T01:intron 30.0%
ATCACAATAAAAGACTGTGT+TGG + Chr5:61343538-61343557 MsG0580027458.01.T01:intron 30.0%
ATGAGTCAAAGAGAAATTCA+AGG + Chr5:61344987-61345006 MsG0580027458.01.T01:intron 30.0%
ATTTAATTAACCCTTCCAAG+AGG + Chr5:61342701-61342720 MsG0580027458.01.T01:intron 30.0%
CAAGGGATATTTGGTTATTA+AGG + Chr5:61345005-61345024 MsG0580027458.01.T01:intron 30.0%
CTATTCAAAAGTTTGTCAAC+TGG + Chr5:61344036-61344055 MsG0580027458.01.T01:CDS 30.0%
CTCTCTAGATGAAAAATTTC+GGG + Chr5:61342637-61342656 MsG0580027458.01.T01:intron 30.0%
CTTTGTTGAAAAACAAAGGA+AGG + Chr5:61344840-61344859 MsG0580027458.01.T01:intron 30.0%
GAGGATTTGTGTTTATTAAG+CGG - Chr5:61344608-61344627 None:intergenic 30.0%
GGACTATTTCAAAACTCAAA+AGG + Chr5:61343639-61343658 MsG0580027458.01.T01:intron 30.0%
GGCTCTTTATAACAATACAT+GGG - Chr5:61342588-61342607 None:intergenic 30.0%
TAATACGACAAGTGTGATAT+AGG - Chr5:61343373-61343392 None:intergenic 30.0%
TAATGGAAGCAAGTACAAAA+TGG + Chr5:61340803-61340822 MsG0580027458.01.T01:CDS 30.0%
TGAAATTGTGCCTAAAAATG+TGG + Chr5:61344355-61344374 MsG0580027458.01.T01:intron 30.0%
TGAGTCAAAGAGAAATTCAA+GGG + Chr5:61344988-61345007 MsG0580027458.01.T01:intron 30.0%
TGGTACAAAACTTCAAAAAG+AGG + Chr5:61340969-61340988 MsG0580027458.01.T01:CDS 30.0%
TGGTATGATTCATACCAAAA+AGG - Chr5:61344646-61344665 None:intergenic 30.0%
TTAATAAGATCCCTCAGTAA+AGG + Chr5:61345389-61345408 MsG0580027458.01.T01:CDS 30.0%
TTACAATTGGAGGTAAGATA+GGG - Chr5:61342770-61342789 None:intergenic 30.0%
TTATAAAGAGCCTAATCCAA+CGG + Chr5:61342596-61342615 MsG0580027458.01.T01:intron 30.0%
TTGAATGACTCTTATGAGTT+GGG - Chr5:61343567-61343586 None:intergenic 30.0%
TTGTAAAAACTGTTCAGATC+TGG - Chr5:61341682-61341701 None:intergenic 30.0%
TTGTTCTAACAGCAACAATT+GGG + Chr5:61342240-61342259 MsG0580027458.01.T01:intron 30.0%
TTTAATTAACCCTTCCAAGA+GGG + Chr5:61342702-61342721 MsG0580027458.01.T01:intron 30.0%
TTTGTTCTAACAGCAACAAT+TGG + Chr5:61342239-61342258 MsG0580027458.01.T01:intron 30.0%
! AGTGCTTTGTTGAAAAACAA+AGG + Chr5:61344836-61344855 MsG0580027458.01.T01:intron 30.0%
! ATTTTCTTGGTTACAATTGG+AGG - Chr5:61342780-61342799 None:intergenic 30.0%
! CTTCCATTAATTACCGTTTT+TGG + Chr5:61341046-61341065 MsG0580027458.01.T01:CDS 30.0%
! TAATTCTGAAGAAGATCCAT+TGG + Chr5:61341969-61341988 MsG0580027458.01.T01:intron 30.0%
! TATAACAATACATGGGTTGA+TGG - Chr5:61342581-61342600 None:intergenic 30.0%
! TATTTTACACACATGCCATA+AGG - Chr5:61344887-61344906 None:intergenic 30.0%
! TTGTATAATTAACTTGGCCA+CGG + Chr5:61344471-61344490 MsG0580027458.01.T01:intron 30.0%
!! AATTTCTTGGTCTTGTACTT+TGG - Chr5:61345346-61345365 None:intergenic 30.0%
!! ATAACAATACATGGGTTGAT+GGG - Chr5:61342580-61342599 None:intergenic 30.0%
!! ATAACCTCTTTTTCATCTTG+TGG - Chr5:61340913-61340932 None:intergenic 30.0%
!! GTAGCTATAAGTTCTAAAGT+TGG + Chr5:61345540-61345559 MsG0580027458.01.T01:three_prime_UTR 30.0%
!! TAAGAATCTTTTTCTGGTGA+CGG + Chr5:61342124-61342143 MsG0580027458.01.T01:intron 30.0%
!!! ACATACAAAGAGTACCTTTT+AGG + Chr5:61341315-61341334 MsG0580027458.01.T01:intron 30.0%
AAACAAAGCCGTTAATCACA+AGG - Chr5:61341827-61341846 None:intergenic 35.0%
AAACATACCTGTAAGAAGCA+GGG - Chr5:61341080-61341099 None:intergenic 35.0%
AAAGAGGTTAATGGGAAGAA+AGG + Chr5:61340985-61341004 MsG0580027458.01.T01:CDS 35.0%
AACAAATACACTGAGTTCCT+AGG - Chr5:61344715-61344734 None:intergenic 35.0%
AAGTAACAATGGAGGTTCTA+AGG + Chr5:61340614-61340633 MsG0580027458.01.T01:exon 35.0%
ACAAGTGTGATATAGGTAGA+TGG - Chr5:61343366-61343385 None:intergenic 35.0%
ACATGCTTGCTTTACATTGT+CGG - Chr5:61342530-61342549 None:intergenic 35.0%
ACCACATGAAACATAAACCT+AGG + Chr5:61344695-61344714 MsG0580027458.01.T01:intron 35.0%
AGAAAAGACATATCTGTGTG+TGG - Chr5:61344180-61344199 None:intergenic 35.0%
AGCATTTCTTCCTTTACTGA+GGG - Chr5:61345402-61345421 None:intergenic 35.0%
AGGCCAAAAACGGTAATTAA+TGG - Chr5:61341052-61341071 None:intergenic 35.0%
AGGTTATTGCTAAACCTGTT+GGG + Chr5:61340926-61340945 MsG0580027458.01.T01:CDS 35.0%
ATGGAAGCAAGTACAAAATG+GGG + Chr5:61340805-61340824 MsG0580027458.01.T01:CDS 35.0%
ATTGTGCCTAAAAATGTGGT+TGG + Chr5:61344359-61344378 MsG0580027458.01.T01:intron 35.0%
CGAATTATTGACCTCCTAAA+AGG - Chr5:61341332-61341351 None:intergenic 35.0%
CTTCATCAAAGAAAGGTAGA+TGG - Chr5:61343337-61343356 None:intergenic 35.0%
GAACACTAACATTTAGTTGG+AGG - Chr5:61342807-61342826 None:intergenic 35.0%
GAGGAACACTAACATTTAGT+TGG - Chr5:61342810-61342829 None:intergenic 35.0%
GATTGTAGATGTAGCATCTT+TGG - Chr5:61340662-61340681 None:intergenic 35.0%
GGGTTGCTGAAATCTATTAT+AGG - Chr5:61340757-61340776 None:intergenic 35.0%
GTACAAGACCAAGAAATTTG+AGG + Chr5:61345348-61345367 MsG0580027458.01.T01:CDS 35.0%
GTACATGCAACATGTGAATT+AGG + Chr5:61342396-61342415 MsG0580027458.01.T01:intron 35.0%
GTTACAATTGGAGGTAAGAT+AGG - Chr5:61342771-61342790 None:intergenic 35.0%
GTTACCACAAGATGAAAAAG+AGG + Chr5:61340906-61340925 MsG0580027458.01.T01:CDS 35.0%
GTTGAATGACTCTTATGAGT+TGG - Chr5:61343568-61343587 None:intergenic 35.0%
TAAACATACCTGTAAGAAGC+AGG - Chr5:61341081-61341100 None:intergenic 35.0%
TAATAATAGAGCAGTGCCAA+TGG - Chr5:61341988-61342007 None:intergenic 35.0%
TAGGAACTCAGTGTATTTGT+TGG + Chr5:61344714-61344733 MsG0580027458.01.T01:intron 35.0%
TATCAAATGATCGTGTCATG+TGG + Chr5:61345494-61345513 MsG0580027458.01.T01:three_prime_UTR 35.0%
TATGTCCCAGCTCAAAATAA+TGG - Chr5:61341215-61341234 None:intergenic 35.0%
TATTGTGATGCACACCTAAT+TGG - Chr5:61343527-61343546 None:intergenic 35.0%
TCCTAGGTTTATGTTTCATG+TGG - Chr5:61344699-61344718 None:intergenic 35.0%
TCTAAACAAAAAGGAGAGGT+AGG - Chr5:61343222-61343241 None:intergenic 35.0%
TTACATTGTCGGGATAATGT+CGG - Chr5:61342519-61342538 None:intergenic 35.0%
TTCTCTTGGTTAACCAACTT+TGG - Chr5:61345319-61345338 None:intergenic 35.0%
! AAAAGTTTGTCAACTGGTCT+TGG + Chr5:61344042-61344061 MsG0580027458.01.T01:CDS 35.0%
! ACTATGCCAACCACATTTTT+AGG - Chr5:61344368-61344387 None:intergenic 35.0%
! AGTAACAATGGAGGTTCTAA+GGG + Chr5:61340615-61340634 MsG0580027458.01.T01:exon 35.0%
! AGTTGGAGGTAAGATTTTCT+TGG - Chr5:61342793-61342812 None:intergenic 35.0%
! GTGTATTTGTTGGAGAGAAA+AGG + Chr5:61344724-61344743 MsG0580027458.01.T01:intron 35.0%
! TAGAACCTCCATTGTTACTT+TGG - Chr5:61340614-61340633 None:intergenic 35.0%
! TGTTTGGAGTGATTCATTTG+AGG + Chr5:61341842-61341861 MsG0580027458.01.T01:intron 35.0%
!! AAAGTTTGTCAACTGGTCTT+GGG + Chr5:61344043-61344062 MsG0580027458.01.T01:CDS 35.0%
!! AACTTGTTTGCTTTTCTTGC+AGG + Chr5:61343965-61343984 MsG0580027458.01.T01:intron 35.0%
!! AAGGACTTGTTAAACATTGG+AGG - Chr5:61344627-61344646 None:intergenic 35.0%
!! ACTTGTTTGCTTTTCTTGCA+GGG + Chr5:61343966-61343985 MsG0580027458.01.T01:intron 35.0%
!! TTGTGATTAACGGCTTTGTT+TGG + Chr5:61341826-61341845 MsG0580027458.01.T01:intron 35.0%
!! TTTGTTCTGAAGTGCAAAGA+AGG + Chr5:61342731-61342750 MsG0580027458.01.T01:intron 35.0%
!!! AATGTCGGGCTCTTTATTTT+CGG - Chr5:61342504-61342523 None:intergenic 35.0%
!!! AGTAGTCCATTATTTTGAGC+TGG + Chr5:61341206-61341225 MsG0580027458.01.T01:intron 35.0%
!!! GTAGTCCATTATTTTGAGCT+GGG + Chr5:61341207-61341226 MsG0580027458.01.T01:intron 35.0%
!!! TACAAAGAGTACCTTTTAGG+AGG + Chr5:61341318-61341337 MsG0580027458.01.T01:intron 35.0%
AAAGACATATCTGTGTGTGG+AGG - Chr5:61344177-61344196 None:intergenic 40.0%
AAATTGTCTCCCTCTTGGAA+GGG - Chr5:61342714-61342733 None:intergenic 40.0%
AAGATGAGACAAGAATGTCG+TGG + Chr5:61345248-61345267 MsG0580027458.01.T01:CDS 40.0%
AATGCCCTTGTCATTCACAT+TGG + Chr5:61344279-61344298 MsG0580027458.01.T01:CDS 40.0%
AATTGGTCCTCATCCAAAGT+TGG + Chr5:61345303-61345322 MsG0580027458.01.T01:CDS 40.0%
AGAACAAATTGTCTCCCTCT+TGG - Chr5:61342719-61342738 None:intergenic 40.0%
AGGTTAATGGGAAGAAAGGT+TGG + Chr5:61340989-61341008 MsG0580027458.01.T01:CDS 40.0%
AGTTCAAGGTGTGAAACTTG+AGG + Chr5:61340729-61340748 MsG0580027458.01.T01:CDS 40.0%
AGTTTCTGACCTAAGGAACA+TGG - Chr5:61340689-61340708 None:intergenic 40.0%
ATACCATTGACCATCTCTAG+AGG - Chr5:61344241-61344260 None:intergenic 40.0%
CAAGCAAGACAAAAGAGATG+TGG - Chr5:61343291-61343310 None:intergenic 40.0%
CATCAAAGAAAGGTAGATGG+TGG - Chr5:61343334-61343353 None:intergenic 40.0%
CATGCTTGCTTTACATTGTC+GGG - Chr5:61342529-61342548 None:intergenic 40.0%
CGGTAATTAATGGAAGAAGG+TGG - Chr5:61341042-61341061 None:intergenic 40.0%
CTATATTTATCCCAGAGGCT+GGG + Chr5:61342018-61342037 MsG0580027458.01.T01:intron 40.0%
GACAATGTAAAGCAAGCATG+TGG + Chr5:61342529-61342548 MsG0580027458.01.T01:intron 40.0%
GAGCATTTCTTCCTTTACTG+AGG - Chr5:61345403-61345422 None:intergenic 40.0%
GAGGTTATTGCTAAACCTGT+TGG + Chr5:61340925-61340944 MsG0580027458.01.T01:CDS 40.0%
GATCAACAACCAGCAACTAA+GGG + Chr5:61344912-61344931 MsG0580027458.01.T01:intron 40.0%
GCTTGAAGAACATGAACTCA+AGG + Chr5:61344065-61344084 MsG0580027458.01.T01:CDS 40.0%
GGTTAATGGGAAGAAAGGTT+GGG + Chr5:61340990-61341009 MsG0580027458.01.T01:CDS 40.0%
GTCACCAATGTGAATGACAA+GGG - Chr5:61344286-61344305 None:intergenic 40.0%
GTGCTCTCTTCATCAAAGAA+AGG - Chr5:61343344-61343363 None:intergenic 40.0%
TACATTGTCGGGATAATGTC+GGG - Chr5:61342518-61342537 None:intergenic 40.0%
TAGAGAGATTCCCGAAACTT+TGG - Chr5:61342624-61342643 None:intergenic 40.0%
TATATTTATCCCAGAGGCTG+GGG + Chr5:61342019-61342038 MsG0580027458.01.T01:intron 40.0%
TCACGCCTGAGATTACATAT+CGG - Chr5:61344559-61344578 None:intergenic 40.0%
TCTGATTCATTGGAAGGGTA+TGG + Chr5:61340949-61340968 MsG0580027458.01.T01:CDS 40.0%
TGATCAACAACCAGCAACTA+AGG + Chr5:61344911-61344930 MsG0580027458.01.T01:intron 40.0%
TGGTTAACCAACTTTGGATG+AGG - Chr5:61345313-61345332 None:intergenic 40.0%
TTGATGGGAAATGGAAGAGA+TGG - Chr5:61342565-61342584 None:intergenic 40.0%
TTGGGTCTGATTCATTGGAA+GGG + Chr5:61340944-61340963 MsG0580027458.01.T01:CDS 40.0%
TTTACTACCTCTCACACTCT+GGG - Chr5:61342052-61342071 None:intergenic 40.0%
! AAGTGCAAAGAAGGTTTGGT+TGG + Chr5:61342740-61342759 MsG0580027458.01.T01:intron 40.0%
! CATTCACATTGGTGACCAAA+TGG + Chr5:61344290-61344309 MsG0580027458.01.T01:CDS 40.0%
! TCTGAAGTGCAAAGAAGGTT+TGG + Chr5:61342736-61342755 MsG0580027458.01.T01:intron 40.0%
!! ATACATGGGTTGATGGGAAA+TGG - Chr5:61342574-61342593 None:intergenic 40.0%
!! ATGTGAATGACAAGGGCATT+AGG - Chr5:61344279-61344298 None:intergenic 40.0%
!! CCTCTGGGATAAATATAGGT+GGG - Chr5:61342016-61342035 None:intergenic 40.0%
!! TACCATTTTGGTCTCCAATG+AGG + Chr5:61344200-61344219 MsG0580027458.01.T01:CDS 40.0%
!! TCAAGCTATTTTGTCGCATG+TGG - Chr5:61344666-61344685 None:intergenic 40.0%
!! TGTACTTTGGTGGATTCTCT+TGG - Chr5:61345333-61345352 None:intergenic 40.0%
!! TGTGAATGACAAGGGCATTA+GGG - Chr5:61344278-61344297 None:intergenic 40.0%
!! TTCTTGGTCTTGTACTTTGG+TGG - Chr5:61345343-61345362 None:intergenic 40.0%
!!! ATGTCGGGCTCTTTATTTTC+GGG - Chr5:61342503-61342522 None:intergenic 40.0%
AACTTTGGCACCGTTGGATT+AGG - Chr5:61342609-61342628 None:intergenic 45.0%
ACAAGATCAGGAACTGGACA+TGG - Chr5:61344144-61344163 None:intergenic 45.0%
ACCAATAGGCTGTAACAACC+AGG + Chr5:61343773-61343792 MsG0580027458.01.T01:intron 45.0%
ACCTGTTGGGTCTGATTCAT+TGG + Chr5:61340939-61340958 MsG0580027458.01.T01:CDS 45.0%
AGGGAGGTGAATGAGGAATA+TGG + Chr5:61343985-61344004 MsG0580027458.01.T01:intron 45.0%
CAAATTGTCTCCCTCTTGGA+AGG - Chr5:61342715-61342734 None:intergenic 45.0%
CAATCCCATCCATGTTCCTT+AGG + Chr5:61340677-61340696 MsG0580027458.01.T01:CDS 45.0%
CACCTCATTGGAGACCAAAA+TGG - Chr5:61344205-61344224 None:intergenic 45.0%
CAGGGTTTGTAGGCCAAAAA+CGG - Chr5:61341062-61341081 None:intergenic 45.0%
CATGAACTCAAGGAAGTTGC+AGG + Chr5:61344075-61344094 MsG0580027458.01.T01:CDS 45.0%
CCAAAGCCAGAACACGAAAT+TGG + Chr5:61345286-61345305 MsG0580027458.01.T01:CDS 45.0%
CCAGGAACAACAACAGTTCA+AGG + Chr5:61340715-61340734 MsG0580027458.01.T01:CDS 45.0%
CCAGTTCCTGATCTTGTTCT+AGG + Chr5:61344147-61344166 MsG0580027458.01.T01:CDS 45.0%
CCCACCTATATTTATCCCAG+AGG + Chr5:61342013-61342032 MsG0580027458.01.T01:intron 45.0%
CCTAGAACAAGATCAGGAAC+TGG - Chr5:61344150-61344169 None:intergenic 45.0%
CCTATATTTATCCCAGAGGC+TGG + Chr5:61342017-61342036 MsG0580027458.01.T01:intron 45.0%
CTACAAACCCTGCTTCTTAC+AGG + Chr5:61341070-61341089 MsG0580027458.01.T01:CDS 45.0%
CTGACCTAAGGAACATGGAT+GGG - Chr5:61340684-61340703 None:intergenic 45.0%
CTGTAAGAAGCAGGGTTTGT+AGG - Chr5:61341072-61341091 None:intergenic 45.0%
CTTTACTACCTCTCACACTC+TGG - Chr5:61342053-61342072 None:intergenic 45.0%
GCTAAAGTTCCCTTAGTTGC+TGG - Chr5:61344924-61344943 None:intergenic 45.0%
GGTCACCAATGTGAATGACA+AGG - Chr5:61344287-61344306 None:intergenic 45.0%
GTGACTCAGTTTCTGACCTA+AGG - Chr5:61340696-61340715 None:intergenic 45.0%
GTTGGGTCTGATTCATTGGA+AGG + Chr5:61340943-61340962 MsG0580027458.01.T01:CDS 45.0%
TCCAATGAATCAGACCCAAC+AGG - Chr5:61340943-61340962 None:intergenic 45.0%
TCCTGGTTGTTACAGCCTAT+TGG - Chr5:61343777-61343796 None:intergenic 45.0%
TCTGACCTAAGGAACATGGA+TGG - Chr5:61340685-61340704 None:intergenic 45.0%
TGAGGACCAATTTCGTGTTC+TGG - Chr5:61345295-61345314 None:intergenic 45.0%
TTACTACCTCTCACACTCTG+GGG - Chr5:61342051-61342070 None:intergenic 45.0%
! AAGCCTCTAGAGATGGTCAA+TGG + Chr5:61344235-61344254 MsG0580027458.01.T01:CDS 45.0%
! AAGGGTATGTGAGTGGTTGT+TGG + Chr5:61344859-61344878 MsG0580027458.01.T01:intron 45.0%
! ACAAAGGAAGGGTATGTGAG+TGG + Chr5:61344852-61344871 MsG0580027458.01.T01:intron 45.0%
! ATCCAACGGTGCCAAAGTTT+CGG + Chr5:61342610-61342629 MsG0580027458.01.T01:intron 45.0%
! CCTTGAACTGTTGTTGTTCC+TGG - Chr5:61340718-61340737 None:intergenic 45.0%
! TCACATTGGTGACCAAATGG+AGG + Chr5:61344293-61344312 MsG0580027458.01.T01:CDS 45.0%
! TGTTGATAGAGCTGTATCCG+TGG - Chr5:61344491-61344510 None:intergenic 45.0%
!! CCAATTTCGTGTTCTGGCTT+TGG - Chr5:61345289-61345308 None:intergenic 45.0%
!! CCAGCCTCTGGGATAAATAT+AGG - Chr5:61342020-61342039 None:intergenic 45.0%
!! GAGTGGTTGTTGGTTCCTTA+TGG + Chr5:61344869-61344888 MsG0580027458.01.T01:intron 45.0%
!! GCCTCTGGGATAAATATAGG+TGG - Chr5:61342017-61342036 None:intergenic 45.0%
!! TGTTTGCTTTTCTTGCAGGG+AGG + Chr5:61343969-61343988 MsG0580027458.01.T01:intron 45.0%
!! ATTTAATATTTAACATATAT+AGG - Chr5:61342077-61342096 None:intergenic 5.0%
!!! ATATTAATTTTAATATTTGT+TGG - Chr5:61341576-61341595 None:intergenic 5.0%
!!! ATTATTAACTAAATTTTAAT+AGG - Chr5:61343681-61343700 None:intergenic 5.0%
!!! TTCTTAATTTATTTTTAAAT+GGG + Chr5:61343712-61343731 MsG0580027458.01.T01:intron 5.0%
!!! TTTCTTAATTTATTTTTAAA+TGG + Chr5:61343711-61343730 MsG0580027458.01.T01:intron 5.0%
AAGCAAGCATGTGGTGCATG+TGG + Chr5:61342538-61342557 MsG0580027458.01.T01:intron 50.0%
AGATCAGGAACTGGACATGG+TGG - Chr5:61344141-61344160 None:intergenic 50.0%
AGCAAGCATGTGGTGCATGT+GGG + Chr5:61342539-61342558 MsG0580027458.01.T01:intron 50.0%
AGGTCAGAAACTGAGTCACC+AGG + Chr5:61340697-61340716 MsG0580027458.01.T01:CDS 50.0%
GAACTCAAGGAAGTTGCAGG+TGG + Chr5:61344078-61344097 MsG0580027458.01.T01:CDS 50.0%
GATCAGGAACTGGACATGGT+GGG - Chr5:61344140-61344159 None:intergenic 50.0%
GGCACACCTAGAACAAGATC+AGG - Chr5:61344156-61344175 None:intergenic 50.0%
TGGCAAGTACCTACGTGAAG+TGG + Chr5:61344005-61344024 MsG0580027458.01.T01:CDS 50.0%
TTCTTGCAGGGAGGTGAATG+AGG + Chr5:61343978-61343997 MsG0580027458.01.T01:intron 50.0%
TTGAAGACCCTGCACCTCAT+TGG - Chr5:61344217-61344236 None:intergenic 50.0%
TTGGTCTCCAATGAGGTGCA+GGG + Chr5:61344207-61344226 MsG0580027458.01.T01:CDS 50.0%
TTTGGTCTCCAATGAGGTGC+AGG + Chr5:61344206-61344225 MsG0580027458.01.T01:CDS 50.0%
! GGTCTTCAAGCCTCTAGAGA+TGG + Chr5:61344228-61344247 MsG0580027458.01.T01:CDS 50.0%
! GTTTGTCTGCCACTTCACGT+AGG - Chr5:61344017-61344036 None:intergenic 50.0%
! TCCAACGGTGCCAAAGTTTC+GGG + Chr5:61342611-61342630 MsG0580027458.01.T01:intron 50.0%
!! GGCTTTGGCTCTATGAACAC+TGG - Chr5:61345274-61345293 None:intergenic 50.0%
CAGATACCCCAGAGTGTGAG+AGG + Chr5:61342042-61342061 MsG0580027458.01.T01:intron 55.0%
TCCCGAAACTTTGGCACCGT+TGG - Chr5:61342615-61342634 None:intergenic 55.0%
GGGTATCTGCCCCAGCCTCT+GGG - Chr5:61342031-61342050 None:intergenic 65.0%
! GGGGTATCTGCCCCAGCCTC+TGG - Chr5:61342032-61342051 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 61340583 61345616 61340583 ID=MsG0580027458.01;Name=MsG0580027458.01
Chr5 mRNA 61340583 61345616 61340583 ID=MsG0580027458.01.T01;Parent=MsG0580027458.01;Name=MsG0580027458.01.T01;_AED=0.44;_eAED=0.44;_QI=39|1|1|1|1|1|3|208|336
Chr5 exon 61340583 61341091 61340583 ID=MsG0580027458.01.T01:exon:43149;Parent=MsG0580027458.01.T01
Chr5 exon 61343987 61344314 61343987 ID=MsG0580027458.01.T01:exon:43150;Parent=MsG0580027458.01.T01
Chr5 exon 61345196 61345616 61345196 ID=MsG0580027458.01.T01:exon:43151;Parent=MsG0580027458.01.T01
Chr5 five_prime_UTR 61340583 61340621 61340583 ID=MsG0580027458.01.T01:five_prime_utr;Parent=MsG0580027458.01.T01
Chr5 CDS 61340622 61341091 61340622 ID=MsG0580027458.01.T01:cds;Parent=MsG0580027458.01.T01
Chr5 CDS 61343987 61344314 61343987 ID=MsG0580027458.01.T01:cds;Parent=MsG0580027458.01.T01
Chr5 CDS 61345196 61345408 61345196 ID=MsG0580027458.01.T01:cds;Parent=MsG0580027458.01.T01
Chr5 three_prime_UTR 61345409 61345616 61345409 ID=MsG0580027458.01.T01:three_prime_utr;Parent=MsG0580027458.01.T01
Gene Sequence

>MsG0580027458.01.T01

ATGGAGGTTCTAAGGGTACAAACAATAGCTCATCAATCCAAAGATGCTACATCTACAATCCCATCCATGTTCCTTAGGTCAGAAACTGAGTCACCAGGAACAACAACAGTTCAAGGTGTGAAACTTGAGGTACCTATAATAGATTTCAGCAACCCTGATAAAGCAAAAATACAAAATGAAATAATGGAAGCAAGTACAAAATGGGGAATGTTTCAAATTGTGAACCATGAAATTCCAAATGAAGTTATAAAAAAGTTACAAAGTGTTGGTAAAGAGTTTTTTGAGTTACCACAAGATGAAAAAGAGGTTATTGCTAAACCTGTTGGGTCTGATTCATTGGAAGGGTATGGTACAAAACTTCAAAAAGAGGTTAATGGGAAGAAAGGTTGGGTAGATCATTTGTTTCACATTATATGGCCACCTTCTTCCATTAATTACCGTTTTTGGCCTACAAACCCTGCTTCTTACAGGGAGGTGAATGAGGAATATGGCAAGTACCTACGTGAAGTGGCAGACAAACTATTCAAAAGTTTGTCAACTGGTCTTGGGCTTGAAGAACATGAACTCAAGGAAGTTGCAGGTGGAGATGAGTTGATTCACATGTTGAAAATCAACTACTACCCACCATGTCCAGTTCCTGATCTTGTTCTAGGTGTGCCTCCACACACAGATATGTCTTTTCTTACCATTTTGGTCTCCAATGAGGTGCAGGGTCTTCAAGCCTCTAGAGATGGTCAATGGTATGATGTTAAGTATGTCCCTAATGCCCTTGTCATTCACATTGGTGACCAAATGGAGATACTGAGCAATGGAAAATATAAGGCTGTATTGCACAGAACAACTGTAAACAAAGATGAGACAAGAATGTCGTGGCCAGTGTTCATAGAGCCAAAGCCAGAACACGAAATTGGTCCTCATCCAAAGTTGGTTAACCAAGAGAATCCACCAAAGTACAAGACCAAGAAATTTGAGGATTATCTTTATTGTAAGCTTAATAAGATCCCTCAGTAA

Protein sequence

>MsG0580027458.01.T01

MEVLRVQTIAHQSKDATSTIPSMFLRSETESPGTTTVQGVKLEVPIIDFSNPDKAKIQNEIMEASTKWGMFQIVNHEIPNEVIKKLQSVGKEFFELPQDEKEVIAKPVGSDSLEGYGTKLQKEVNGKKGWVDHLFHIIWPPSSINYRFWPTNPASYREVNEEYGKYLREVADKLFKSLSTGLGLEEHELKEVAGGDELIHMLKINYYPPCPVPDLVLGVPPHTDMSFLTILVSNEVQGLQASRDGQWYDVKYVPNALVIHIGDQMEILSNGKYKAVLHRTTVNKDETRMSWPVFIEPKPEHEIGPHPKLVNQENPPKYKTKKFEDYLYCKLNKIPQ*