AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004492.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004492.01.T01 MTR_1g080910 94.444 126 7 0 204 329 14 139 1.91e-71 218
MsG0180004492.01.T01 MTR_1g080920 75.926 108 26 0 23 130 62 169 6.32e-46 161
MsG0180004492.01.T01 MTR_1g080920 81.111 90 13 2 118 207 280 365 1.42e-41 149
MsG0180004492.01.T01 MTR_1g080910 95.294 85 4 0 206 290 16 100 7.21e-43 144
MsG0180004492.01.T01 MTR_7g115180 70.707 99 24 2 236 329 46 144 7.07e-38 132
MsG0180004492.01.T01 MTR_7g115120 66.667 72 24 0 118 189 265 336 1.95e-25 105
MsG0180004492.01.T01 MTR_7g115120 50.000 80 36 1 44 123 80 155 5.98e-14 72.4
MsG0180004492.01.T01 MTR_7g115180 68.919 74 21 1 236 307 46 119 9.63e-25 97.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004492.01.T01 AT5G28750 59.048 105 38 2 226 325 38 142 5.63e-34 122
MsG0180004492.01.T01 AT5G28770 47.000 100 40 2 40 130 60 155 1.65e-14 72.0
MsG0180004492.01.T01 AT5G28770 47.000 100 40 2 40 130 60 155 3.31e-14 71.6
MsG0180004492.01.T01 AT5G28770 47.000 100 40 2 40 130 60 155 7.19e-14 71.6

Find 122 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAACTTCGGGCAATTTCTT+AGG 0.195754 1:+78816077 None:intergenic
TGTGCTTCTGGTTCTGGTTC+TGG 0.206899 1:+78816184 None:intergenic
CATTATTGTCTTGATCTTCT+TGG 0.219177 1:+78815641 None:intergenic
GAAATTTCTTCAGTAGAATT+AGG 0.222712 1:+78815676 None:intergenic
ACGCTTTGTGCTTCTGGTTC+TGG 0.225104 1:+78816178 None:intergenic
AGTAAAACGCTTTGTGCTTC+TGG 0.237236 1:+78816172 None:intergenic
CCCGAGCTTGTTGTTATTGC+AGG 0.253511 1:-78816122 MsG0180004492.01.T01:CDS
GCATCTTTATCTTGTAATAT+AGG 0.256635 1:+78819870 None:intergenic
TCCAACTTTAGTAGCATTAG+AGG 0.290868 1:+78820219 None:intergenic
GGCAAAACGGCACCGTCTTT+TGG 0.308675 1:+78822018 None:intergenic
TTGATTCAAACCTTCAGAAA+TGG 0.321181 1:+78820189 None:intergenic
ACCCTATCCATGTTGTTTGT+TGG 0.328276 1:+78822231 None:intergenic
GCCGATGCTGCGACCAACTT+CGG 0.342708 1:+78816064 None:intergenic
TTTACTTGCAACGCCTTCTT+CGG 0.349544 1:-78816155 MsG0180004492.01.T01:CDS
AAGTGATGTATTGTTAGAAT+TGG 0.354759 1:+78816220 None:intergenic
CCGATGCTGCGACCAACTTC+GGG 0.355688 1:+78816065 None:intergenic
TATGCAGGATCTGTTCCTTC+TGG 0.364918 1:-78819903 MsG0180004492.01.T01:intron
TAAGAAGGATAAGGTGGAAT+AGG 0.383721 1:+78816247 None:intergenic
ATCCATGTTGTTTGTTGGAA+TGG 0.385803 1:+78822236 None:intergenic
TGCGGTGACCATAGGTTGTC+GGG 0.393062 1:+78822189 None:intergenic
GTTAGAATTGGAAGCTAAGA+AGG 0.407354 1:+78816232 None:intergenic
TGATTCAAACCTTCAGAAAT+GGG 0.409793 1:+78820190 None:intergenic
CCGTTGATTCCGAAGAATAT+CGG 0.415030 1:-78821976 MsG0180004492.01.T01:CDS
TCCTCTAATGCTACTAAAGT+TGG 0.420756 1:-78820220 MsG0180004492.01.T01:CDS
GTGGAATAGGATGAAGAGAT+TGG 0.421445 1:+78816260 None:intergenic
ATGGGGATGCCAGCATTTGA+TGG 0.424587 1:-78817771 MsG0180004492.01.T01:CDS
ATTCATGTCACCGGCGGCGC+CGG 0.438697 1:-78822165 MsG0180004492.01.T01:five_prime_UTR
CTTCTTCTTTAATTCGCCCT+AGG 0.440454 1:-78816286 MsG0180004492.01.T01:CDS
GAGACAGAGGTGGGGTATAT+CGG 0.440892 1:+78822308 None:intergenic
GAGACTGTGAAAAGAGTTAC+CGG 0.441519 1:-78817834 MsG0180004492.01.T01:CDS
CAGAACAGCCCGATATTCTT+CGG 0.443037 1:+78821967 None:intergenic
GGAAGCGCTGCGACTCATCT+TGG 0.448544 1:+78822131 None:intergenic
GAGGACTGTGGTCCATTCTC+AGG 0.449150 1:+78820238 None:intergenic
AACTGTCAAAAGCTTCCAAC+AGG 0.455252 1:-78816039 MsG0180004492.01.T01:intron
CGTTGATTCCGAAGAATATC+GGG 0.456409 1:-78821975 MsG0180004492.01.T01:CDS
GCGCTGCGGTTGCCATGACT+AGG 0.462989 1:-78821922 MsG0180004492.01.T01:CDS
CCCGAAGTTGGTCGCAGCAT+CGG 0.463383 1:-78816065 MsG0180004492.01.T01:CDS
TCTGAAGAGTAAGCTGAATC+AGG 0.465092 1:-78821948 MsG0180004492.01.T01:CDS
GAATCAACGGCCACCGGAGG+TGG 0.465283 1:+78821989 None:intergenic
CCTAAGAAATTGCCCGAAGT+TGG 0.474122 1:-78816077 MsG0180004492.01.T01:CDS
GGATTCATCGCCGGCGCCGC+CGG 0.486207 1:+78822155 None:intergenic
ATTGGAAGCTAAGAAGGATA+AGG 0.493246 1:+78816238 None:intergenic
ATGCCTGACATGTCATCAAT+GGG 0.494648 1:-78817789 MsG0180004492.01.T01:CDS
CAGCTTCTTGCAGAAAGCGT+TGG 0.498650 1:+78822097 None:intergenic
GAGTCGCAGCGCTTCCGAAT+GGG 0.498693 1:-78822124 MsG0180004492.01.T01:exon
AAAGCGTTGGAACGCCCATT+CGG 0.499920 1:+78822110 None:intergenic
ACGAAATCCCCGACAACCTA+TGG 0.501904 1:-78822197 MsG0180004492.01.T01:five_prime_UTR
TCTTCGGAATCAACGGCCAC+CGG 0.506977 1:+78821983 None:intergenic
GGTGGAAATGAGACAGAGGT+GGG 0.509317 1:+78822299 None:intergenic
GGCCACCGGAGGTGGTCCAT+TGG 0.510682 1:+78821997 None:intergenic
GAATGTGTGTGTGACGATAA+TGG 0.511446 1:+78822278 None:intergenic
ATCCCCATTGATGACATGTC+AGG 0.511654 1:+78817786 None:intergenic
TGAAACCTTGTAGGCAGCAA+AGG 0.513076 1:-78815725 MsG0180004492.01.T01:intron
GAGGTGGTCCATTGGCAAAA+CGG 0.515001 1:+78822005 None:intergenic
CTGCGGTGACCATAGGTTGT+CGG 0.521113 1:+78822188 None:intergenic
TGCAACGCCTTCTTCGGATT+AGG 0.521226 1:-78816149 MsG0180004492.01.T01:CDS
GGGCGAATTAAAGAAGAAGA+AGG 0.522869 1:+78816290 None:intergenic
TGCATCTGCTGAATTGTCTG+AGG 0.523554 1:+78817743 None:intergenic
GCATCTGCTGAATTGTCTGA+GGG 0.526766 1:+78817744 None:intergenic
GAGGGGCTTCCATCAAATGC+TGG 0.527926 1:+78817762 None:intergenic
TGTTGGAATGGATCAACTGA+TGG 0.528003 1:+78822248 None:intergenic
TGTCAGCAACAGAGGAAAGA+AGG 0.528715 1:+78822063 None:intergenic
TTCCAACAAACAACATGGAT+AGG 0.529412 1:-78822233 MsG0180004492.01.T01:five_prime_UTR
TTTCTTCTTCGTGGTAGTTG+AGG 0.532506 1:-78815485 MsG0180004492.01.T01:three_prime_UTR
TCCTGCAATAACAACAAGCT+CGG 0.534091 1:+78816121 None:intergenic
CATGCCTGACATGTCATCAA+TGG 0.535358 1:-78817790 MsG0180004492.01.T01:CDS
ATGAAACAATGGGTTCAATC+CGG 0.537486 1:+78817815 None:intergenic
ATCAACAACTATTTCATGAA+AGG 0.538422 1:+78815351 None:intergenic
CAGGCATGACATGAAACAAT+GGG 0.540921 1:+78817805 None:intergenic
CAATAATGTTTCTAGTACAA+AGG 0.541741 1:-78815626 MsG0180004492.01.T01:CDS
TTCCTCTGTTGCTGACAACA+CGG 0.541968 1:-78822057 MsG0180004492.01.T01:CDS
CGCTGCGGTTGCCATGACTA+GGG 0.544605 1:-78821921 MsG0180004492.01.T01:intron
GGATCTCAGCCCATTTCTGA+AGG 0.545730 1:-78820199 MsG0180004492.01.T01:intron
GGCATAGGATTAATAGATGT+GGG 0.545925 1:+78817678 None:intergenic
TGAGTCGCAGCGCTTCCGAA+TGG 0.548231 1:-78822125 MsG0180004492.01.T01:exon
ATGAAGAGATTGGAAGCCTA+GGG 0.550257 1:+78816270 None:intergenic
GATGAAGAGATTGGAAGCCT+AGG 0.550349 1:+78816269 None:intergenic
CATGAATCTGCGGTGACCAT+AGG 0.554146 1:+78822181 None:intergenic
CCTGCAATAACAACAAGCTC+GGG 0.555493 1:+78816122 None:intergenic
TCTTTATCTTGTAATATAGG+TGG 0.555696 1:+78819873 None:intergenic
TGGTCCATTCTCAGGAAAAG+TGG 0.558279 1:+78820246 None:intergenic
AGGTAGTTAAAGAATAATTG+AGG 0.559563 1:-78815432 MsG0180004492.01.T01:three_prime_UTR
GCCGATGCTGCACCAAAAGA+CGG 0.560794 1:-78822030 MsG0180004492.01.T01:CDS
CCGATATTCTTCGGAATCAA+CGG 0.569768 1:+78821976 None:intergenic
GGAAGCTAAGAAGGATAAGG+TGG 0.578078 1:+78816241 None:intergenic
AACCGTGTTGTCAGCAACAG+AGG 0.579200 1:+78822055 None:intergenic
TGGCATAGGATTAATAGATG+TGG 0.582245 1:+78817677 None:intergenic
TGCCAATGGACCACCTCCGG+TGG 0.585880 1:-78821999 MsG0180004492.01.T01:CDS
TGGTGGAAATGAGACAGAGG+TGG 0.586724 1:+78822298 None:intergenic
TCCAACAAACAACATGGATA+GGG 0.587093 1:-78822232 MsG0180004492.01.T01:five_prime_UTR
CATTCTCAGGAAAAGTGGCT+AGG 0.587934 1:+78820251 None:intergenic
AAAGCAAAATACCCTAGTCA+TGG 0.593497 1:+78821910 None:intergenic
TCAGGCATGACATGAAACAA+TGG 0.593558 1:+78817804 None:intergenic
ATTACAAGATAAAGATGCCA+AGG 0.595359 1:-78819865 MsG0180004492.01.T01:intron
GGCGAATTAAAGAAGAAGAA+GGG 0.598550 1:+78816291 None:intergenic
GAGGAAAGAAGGAGAAGGTG+TGG 0.601711 1:+78822074 None:intergenic
AGCGCTGCGACTCATCTTGG+AGG 0.610597 1:+78822134 None:intergenic
TCGGAATCAACGGCCACCGG+AGG 0.611990 1:+78821986 None:intergenic
GGGCACGCCTAATCCGAAGA+AGG 0.614059 1:+78816142 None:intergenic
ATCCATTCCAACAAACAACA+TGG 0.622250 1:-78822238 MsG0180004492.01.T01:five_prime_UTR
CTCATATCATGACATGGCAT+AGG 0.623120 1:+78817663 None:intergenic
CAACAGAGGAAAGAAGGAGA+AGG 0.626357 1:+78822069 None:intergenic
CATCTTGGAGGATTCATCGC+CGG 0.632617 1:+78822146 None:intergenic
TGTTACAAGGAACATGCGGT+AGG 0.633411 1:-78815452 MsG0180004492.01.T01:three_prime_UTR
TCACCGCAGATTCATGTCAC+CGG 0.635057 1:-78822174 MsG0180004492.01.T01:five_prime_UTR
TTCTTAATAAAATTGTACCA+TGG 0.641755 1:-78815566 MsG0180004492.01.T01:three_prime_UTR
GCTGAATCAGGCATGCGCTG+CGG 0.643579 1:-78821936 MsG0180004492.01.T01:CDS
TGATGTGGATCGTCTTGCAC+AGG 0.644197 1:+78817714 None:intergenic
ATAGGTGGATCGCTTCCAGA+AGG 0.645523 1:+78819888 None:intergenic
GGTTGATAGAAATGATGATG+TGG 0.646871 1:+78817699 None:intergenic
GTTCTAAATGCATAACACCA+TGG 0.652008 1:+78815549 None:intergenic
GCGGTGACCATAGGTTGTCG+GGG 0.657758 1:+78822190 None:intergenic
TTGACTCTCATATCATGACA+TGG 0.663706 1:+78817657 None:intergenic
CCGCCGGTGACATGAATCTG+CGG 0.671643 1:+78822171 None:intergenic
CCGCAGATTCATGTCACCGG+CGG 0.672407 1:-78822171 MsG0180004492.01.T01:five_prime_UTR
TTAGTAGCATTAGAGGACTG+TGG 0.673158 1:+78820226 None:intergenic
CATCTGCTGAATTGTCTGAG+GGG 0.674812 1:+78817745 None:intergenic
CATGGATAGGGTATTCTCAG+TGG 0.691390 1:-78822220 MsG0180004492.01.T01:five_prime_UTR
GTGGAAATGAGACAGAGGTG+GGG 0.720976 1:+78822300 None:intergenic
TAATGGTGGAAATGAGACAG+AGG 0.727210 1:+78822295 None:intergenic
TGTGTGTGTGACGATAATGG+TGG 0.777104 1:+78822281 None:intergenic
TGCCTGACATGTCATCAATG+GGG 0.791811 1:-78817788 MsG0180004492.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCTTATTATCTAATTAA+CGG - Chr1:78821733-78821752 MsG0180004492.01.T01:intron 10.0%
!! TAAAAAAATATTATTAACCA+AGG + Chr1:78817067-78817086 None:intergenic 10.0%
!! TAGAAATTTATATAATAAAG+TGG + Chr1:78820826-78820845 None:intergenic 10.0%
!!! AATTTTAACTAAATTTCAAA+AGG + Chr1:78816269-78816288 None:intergenic 10.0%
!!! TAAAATTGAAATTGTTTTAT+AGG - Chr1:78821820-78821839 MsG0180004492.01.T01:intron 10.0%
!! AAAAAGTTTAATGACAATAT+TGG - Chr1:78817572-78817591 MsG0180004492.01.T01:intron 15.0%
!! AAAATAATGCAAAAAGAAAA+TGG + Chr1:78816888-78816907 None:intergenic 15.0%
!! ACTAACTAATTAATATGAAA+TGG - Chr1:78819514-78819533 MsG0180004492.01.T01:intron 15.0%
!! ATTTACTATAAACGTATTAA+GGG + Chr1:78820643-78820662 None:intergenic 15.0%
!! TACGTAATCATAAAAATATT+GGG - Chr1:78821228-78821247 MsG0180004492.01.T01:intron 15.0%
!! TATTTACTATAAACGTATTA+AGG + Chr1:78820644-78820663 None:intergenic 15.0%
!! TGAGAGAATAAAAAAAAAAA+AGG + Chr1:78818274-78818293 None:intergenic 15.0%
!! TGGTATAAAATAAGATAAAT+TGG + Chr1:78820879-78820898 None:intergenic 15.0%
!! TTAGAACTTTATATATAAAG+TGG + Chr1:78820899-78820918 None:intergenic 15.0%
!! TTTGTCTTATATTATACTTT+AGG - Chr1:78819072-78819091 MsG0180004492.01.T01:intron 15.0%
!!! AGCTTACAAAATATAATTTT+TGG + Chr1:78818745-78818764 None:intergenic 15.0%
!!! ATAATTTTTGGATAAAACTT+GGG + Chr1:78818733-78818752 None:intergenic 15.0%
!!! GAAAATAGATTTTATTTTGA+AGG - Chr1:78820730-78820749 MsG0180004492.01.T01:intron 15.0%
!!! GTTTGTTATAACAAATAAAA+TGG + Chr1:78818638-78818657 None:intergenic 15.0%
!!! TATAATTTTTGGATAAAACT+TGG + Chr1:78818734-78818753 None:intergenic 15.0%
!!! TGTGTATTTTATTTTATATC+TGG - Chr1:78818982-78819001 MsG0180004492.01.T01:intron 15.0%
!!! TTCTTTTATAAAAGACTAAT+TGG + Chr1:78820677-78820696 None:intergenic 15.0%
!!! TTTTGTTATTTTTGCATTAT+GGG - Chr1:78815891-78815910 MsG0180004492.01.T01:intron 15.0%
!!! TTTTTGTTATTTTTGCATTA+TGG - Chr1:78815890-78815909 MsG0180004492.01.T01:intron 15.0%
!! AAATAGAATCAAACCAAAAA+TGG - Chr1:78821346-78821365 MsG0180004492.01.T01:intron 20.0%
!! AAATTAGAATCGATTATAAC+TGG - Chr1:78815989-78816008 MsG0180004492.01.T01:intron 20.0%
!! AATTAGAATCGATTATAACT+GGG - Chr1:78815990-78816009 MsG0180004492.01.T01:intron 20.0%
!! ATAGACTTTAATGTATAAGA+GGG + Chr1:78820403-78820422 None:intergenic 20.0%
!! CACAATAACAAAGTAAAAAA+AGG + Chr1:78818809-78818828 None:intergenic 20.0%
!! GTACGTAATCATAAAAATAT+TGG - Chr1:78821227-78821246 MsG0180004492.01.T01:intron 20.0%
!! TATGTTTAGGGAAAAAAAAT+TGG - Chr1:78821146-78821165 MsG0180004492.01.T01:intron 20.0%
!! TCAATAAATTACTTAACAGT+TGG + Chr1:78817678-78817697 None:intergenic 20.0%
!! TTATATGCTATATAAGCTAA+CGG - Chr1:78819700-78819719 MsG0180004492.01.T01:intron 20.0%
!! TTCACATTGTATTAACAAAA+GGG + Chr1:78815791-78815810 None:intergenic 20.0%
!! TTCTTAATAAAATTGTACCA+TGG - Chr1:78822106-78822125 MsG0180004492.01.T01:CDS 20.0%
!! TTTCACATTGTATTAACAAA+AGG + Chr1:78815792-78815811 None:intergenic 20.0%
!!! AACAAACTTTGAGAAAATTA+TGG - Chr1:78818651-78818670 MsG0180004492.01.T01:intron 20.0%
!!! AATTCAAACTTCTATGATTT+TGG + Chr1:78816137-78816156 None:intergenic 20.0%
!!! AGCAAATTTTATTGTTTGTT+TGG - Chr1:78821908-78821927 MsG0180004492.01.T01:intron 20.0%
!!! AGTTGGTAAAAGAAAATAAA+CGG + Chr1:78817661-78817680 None:intergenic 20.0%
!!! ATACATTGATAATTGCAATT+TGG - Chr1:78818051-78818070 MsG0180004492.01.T01:intron 20.0%
!!! ATTTTTTCGTATAGAAACTT+TGG - Chr1:78816903-78816922 MsG0180004492.01.T01:intron 20.0%
!!! GAAGTGTTTAGTAAAATTAT+CGG - Chr1:78819487-78819506 MsG0180004492.01.T01:intron 20.0%
!!! GCAAATTTTATTGTTTGTTT+GGG - Chr1:78821909-78821928 MsG0180004492.01.T01:intron 20.0%
!!! TATAAAAGACTAATTGGTTT+AGG + Chr1:78820671-78820690 None:intergenic 20.0%
!!! TCTATTTTCCAAAACTAAAT+TGG + Chr1:78820719-78820738 None:intergenic 20.0%
!!! TTATTCTAAAAAGACGTTTA+TGG + Chr1:78816380-78816399 None:intergenic 20.0%
!!! TTTATTTTGAAGGAAAGTTT+TGG - Chr1:78820740-78820759 MsG0180004492.01.T01:intron 20.0%
! AAAAAAATTGGACTTGGAAT+TGG - Chr1:78821158-78821177 MsG0180004492.01.T01:intron 25.0%
! AAAAAGAATAGTTTCACAAC+CGG + Chr1:78816932-78816951 None:intergenic 25.0%
! AAAGATCTTAAAGATACTAC+TGG - Chr1:78820492-78820511 MsG0180004492.01.T01:intron 25.0%
! AACTAGTGACTATTAAATGA+GGG - Chr1:78820974-78820993 MsG0180004492.01.T01:intron 25.0%
! AAGATAATCAATCCGAATTT+CGG + Chr1:78816330-78816349 None:intergenic 25.0%
! AAGTGATGTATTGTTAGAAT+TGG + Chr1:78821455-78821474 None:intergenic 25.0%
! AATATAATATTGACACCGAT+TGG + Chr1:78818182-78818201 None:intergenic 25.0%
! ACCTAAAAGAAAGAATAACA+TGG + Chr1:78819805-78819824 None:intergenic 25.0%
! ACTTTCCTCATTTAATCTTT+CGG + Chr1:78817533-78817552 None:intergenic 25.0%
! AGGTAGTTAAAGAATAATTG+AGG - Chr1:78822240-78822259 MsG0180004492.01.T01:five_prime_UTR 25.0%
! ATATTTGACACAATTCAACA+AGG + Chr1:78817742-78817761 None:intergenic 25.0%
! ATCAACAACTATTTCATGAA+AGG + Chr1:78822324-78822343 None:intergenic 25.0%
! ATGGATGAATGATATAGTTT+AGG + Chr1:78821089-78821108 None:intergenic 25.0%
! ATGTGAAAATATCAGCAAAA+TGG + Chr1:78817330-78817349 None:intergenic 25.0%
! ATGTTCCTTGTAACAAAAAA+AGG + Chr1:78822215-78822234 None:intergenic 25.0%
! ATTATAACTGGGAAAATAAC+TGG - Chr1:78816001-78816020 MsG0180004492.01.T01:intron 25.0%
! CAAACACAAATCAAAATGAT+TGG + Chr1:78815820-78815839 None:intergenic 25.0%
! CATAGACTTTAATGTATAAG+AGG + Chr1:78820404-78820423 None:intergenic 25.0%
! CATTCATGTTCTATGAATTT+AGG + Chr1:78816057-78816076 None:intergenic 25.0%
! CATTGCAAATCAATTTAATG+AGG - Chr1:78820319-78820338 MsG0180004492.01.T01:intron 25.0%
! CTCGCAAAAATTAAAGAAAA+CGG + Chr1:78821011-78821030 None:intergenic 25.0%
! GAAATTTCTTCAGTAGAATT+AGG + Chr1:78821999-78822018 None:intergenic 25.0%
! GATTATCTTATCCAAATGAA+AGG - Chr1:78816341-78816360 MsG0180004492.01.T01:intron 25.0%
! GCATCTTTATCTTGTAATAT+AGG + Chr1:78817805-78817824 None:intergenic 25.0%
! GTAATTTATTGAGATGCTTT+AGG - Chr1:78817686-78817705 MsG0180004492.01.T01:CDS 25.0%
! TATTTGACACAATTCAACAA+GGG + Chr1:78817741-78817760 None:intergenic 25.0%
! TCAAATATATCTATCTATGC+AGG - Chr1:78817754-78817773 MsG0180004492.01.T01:CDS 25.0%
! TCACATTGTATTAACAAAAG+GGG + Chr1:78815790-78815809 None:intergenic 25.0%
! TCATATTAAGTCAGTTAGTT+AGG - Chr1:78821033-78821052 MsG0180004492.01.T01:intron 25.0%
! TCATTTAATAGTCACTAGTT+CGG + Chr1:78820974-78820993 None:intergenic 25.0%
! TCTGATCTGTGAAAAAAATT+AGG + Chr1:78818784-78818803 None:intergenic 25.0%
! TCTTTATCTTGTAATATAGG+TGG + Chr1:78817802-78817821 None:intergenic 25.0%
! TTATCCTAAGAATGAGAAAA+TGG + Chr1:78821661-78821680 None:intergenic 25.0%
! TTGAGAAAATTATGGATTTG+AGG - Chr1:78818659-78818678 MsG0180004492.01.T01:intron 25.0%
! TTTCCAAAACTAAATTGGTT+TGG + Chr1:78820714-78820733 None:intergenic 25.0%
!! AAAAAAAAAAAGGTTCTAGC+AGG + Chr1:78818264-78818283 None:intergenic 25.0%
!! CTGCAAGTTGAAAAAAATTA+TGG - Chr1:78818558-78818577 MsG0180004492.01.T01:intron 25.0%
!! CTTTCATTTTAAGCTCTATT+TGG + Chr1:78819736-78819755 None:intergenic 25.0%
!! TACTAGTTTGAAAAATTTCC+AGG - Chr1:78820535-78820554 MsG0180004492.01.T01:intron 25.0%
!! TCCATGTTATTCTTTCTTTT+AGG - Chr1:78819801-78819820 MsG0180004492.01.T01:intron 25.0%
!! TTTTCAAACCATGTAAGTAA+TGG + Chr1:78817291-78817310 None:intergenic 25.0%
!! TTTTCATATTTCTTAGTCCT+TGG - Chr1:78817047-78817066 MsG0180004492.01.T01:intron 25.0%
!! TTTTTCCCTAAACATAAACA+TGG + Chr1:78821142-78821161 None:intergenic 25.0%
!!! AACAAGTTTGTTTGATTTGA+AGG - Chr1:78820559-78820578 MsG0180004492.01.T01:intron 25.0%
!!! ACTTTGTGTTTTTAATGCAA+AGG - Chr1:78816080-78816099 MsG0180004492.01.T01:CDS 25.0%
!!! ATTAGATTTTGAAACCTTGT+AGG - Chr1:78821938-78821957 MsG0180004492.01.T01:CDS 25.0%
!!! ATTAGGTTCCTTTTTTAACT+CGG + Chr1:78821982-78822001 None:intergenic 25.0%
!!! CAATAATGTTTCTAGTACAA+AGG - Chr1:78822046-78822065 MsG0180004492.01.T01:CDS 25.0%
!!! CAATCATTTTGATTTGTGTT+TGG - Chr1:78815818-78815837 MsG0180004492.01.T01:intron 25.0%
!!! CTTTGTGTTTTTAATGCAAA+GGG - Chr1:78816081-78816100 MsG0180004492.01.T01:CDS 25.0%
!!! GTTGTTTTAATTTAGCTGAT+TGG - Chr1:78815954-78815973 MsG0180004492.01.T01:intron 25.0%
!!! GTTTTCTTTAATTTTTGCGA+GGG - Chr1:78821010-78821029 MsG0180004492.01.T01:intron 25.0%
!!! TCTAATGACATCTATTTTTC+AGG - Chr1:78818881-78818900 MsG0180004492.01.T01:intron 25.0%
!!! TTCTTTCTTTTAGGTAAAGA+TGG - Chr1:78819810-78819829 MsG0180004492.01.T01:intron 25.0%
AAAAAACCATTGTTGCCATT+AGG - Chr1:78817865-78817884 MsG0180004492.01.T01:intron 30.0%
AAAAAGCTTCGAATTGCTTT+AGG + Chr1:78822273-78822292 None:intergenic 30.0%
AAAAGAATAGTTTCACAACC+GGG + Chr1:78816931-78816950 None:intergenic 30.0%
AACAAACTTCTAAATCACTC+TGG + Chr1:78818095-78818114 None:intergenic 30.0%
AAGACCCAATATTTAGATCT+GGG + Chr1:78816852-78816871 None:intergenic 30.0%
AATAGCCATAGTTATCAATG+CGG + Chr1:78817164-78817183 None:intergenic 30.0%
AATATCAGCAAAATGGAAGA+TGG + Chr1:78817323-78817342 None:intergenic 30.0%
ACTAGTGACTATTAAATGAG+GGG - Chr1:78820975-78820994 MsG0180004492.01.T01:intron 30.0%
ACTTATTCCCTCAAAATGTT+TGG - Chr1:78820425-78820444 MsG0180004492.01.T01:intron 30.0%
ATAACAATTATCAACACCCA+CGG + Chr1:78821304-78821323 None:intergenic 30.0%
ATGAACATTCTAACTTCAAG+AGG + Chr1:78818503-78818522 None:intergenic 30.0%
ATGATATGAGAGTCAACAAT+GGG - Chr1:78820022-78820041 MsG0180004492.01.T01:intron 30.0%
ATGTAGAACTCCTATATGTT+AGG + Chr1:78821708-78821727 None:intergenic 30.0%
ATTACAAGATAAAGATGCCA+AGG - Chr1:78817807-78817826 MsG0180004492.01.T01:CDS 30.0%
ATTAGACATTGAACTAACCA+AGG + Chr1:78818867-78818886 None:intergenic 30.0%
CAAAGAAAAACGACATAAGA+AGG - Chr1:78816690-78816709 MsG0180004492.01.T01:intron 30.0%
CAATGTAAATACATGAAGCA+GGG + Chr1:78819228-78819247 None:intergenic 30.0%
CATTATTGTCTTGATCTTCT+TGG + Chr1:78822034-78822053 None:intergenic 30.0%
CATTCATCCATTCAAAAGAA+GGG - Chr1:78821098-78821117 MsG0180004492.01.T01:intron 30.0%
CTCTGTTAGGTAAAATATAG+CGG - Chr1:78819391-78819410 MsG0180004492.01.T01:intron 30.0%
GAAAACCGAAAGATTAAATG+AGG - Chr1:78817525-78817544 MsG0180004492.01.T01:intron 30.0%
GAACTAGTGACTATTAAATG+AGG - Chr1:78820973-78820992 MsG0180004492.01.T01:intron 30.0%
GATAAGATTTCCAGAGAAAA+TGG + Chr1:78816602-78816621 None:intergenic 30.0%
GCATTCCATGTTTATGTTTA+GGG - Chr1:78821134-78821153 MsG0180004492.01.T01:intron 30.0%
GGCTTACAAATTCCTATTAA+CGG + Chr1:78816248-78816267 None:intergenic 30.0%
GTTTCTTACTCATTGCAATA+GGG - Chr1:78817377-78817396 MsG0180004492.01.T01:intron 30.0%
TAACAATATCTGACATGTTC+TGG - Chr1:78819772-78819791 MsG0180004492.01.T01:intron 30.0%
TAAGACCCAATATTTAGATC+TGG + Chr1:78816853-78816872 None:intergenic 30.0%
TACAAAATGCAGTCAAATAG+CGG - Chr1:78818390-78818409 MsG0180004492.01.T01:intron 30.0%
TAGGGAAAAAAAATTGGACT+TGG - Chr1:78821152-78821171 MsG0180004492.01.T01:intron 30.0%
TCATTCATCCATTCAAAAGA+AGG - Chr1:78821097-78821116 MsG0180004492.01.T01:intron 30.0%
TCATTCGTTGTATTTGAATG+AGG - Chr1:78821864-78821883 MsG0180004492.01.T01:intron 30.0%
TCTTTCTAAACAAGTTCCTT+AGG - Chr1:78819279-78819298 MsG0180004492.01.T01:intron 30.0%
TGAACATTCTAACTTCAAGA+GGG + Chr1:78818502-78818521 None:intergenic 30.0%
TGATTCAAACCTTCAGAAAT+GGG + Chr1:78817485-78817504 None:intergenic 30.0%
TGCATTCCATGTTTATGTTT+AGG - Chr1:78821133-78821152 MsG0180004492.01.T01:intron 30.0%
TGTTAAAATCCTGCACAAAA+GGG + Chr1:78818422-78818441 None:intergenic 30.0%
TGTTTCTTACTCATTGCAAT+AGG - Chr1:78817376-78817395 MsG0180004492.01.T01:intron 30.0%
TTATCCAAATGAAAGGTCTT+TGG - Chr1:78816348-78816367 MsG0180004492.01.T01:intron 30.0%
TTATGGATTTGAGGAAATCA+TGG - Chr1:78818668-78818687 MsG0180004492.01.T01:intron 30.0%
TTGATTCAAACCTTCAGAAA+TGG + Chr1:78817486-78817505 None:intergenic 30.0%
TTGTATGACCATTACTTACA+TGG - Chr1:78817280-78817299 MsG0180004492.01.T01:intron 30.0%
TTGTTAAAATCCTGCACAAA+AGG + Chr1:78818423-78818442 None:intergenic 30.0%
! AAAAACTGTGGCAAACATTT+TGG - Chr1:78819255-78819274 MsG0180004492.01.T01:intron 30.0%
! AAGCTACTTGATAGCTTATA+GGG - Chr1:78819423-78819442 MsG0180004492.01.T01:intron 30.0%
! AATCAAACAAACTTGTTTCC+TGG + Chr1:78820556-78820575 None:intergenic 30.0%
! ATTGCACAAAATGAAAGTGT+AGG + Chr1:78817242-78817261 None:intergenic 30.0%
! ATTTTAAGCTCTATTTGGCA+AGG + Chr1:78819731-78819750 None:intergenic 30.0%
! CTTTAGGTTTCACAATTAAG+AGG - Chr1:78819088-78819107 MsG0180004492.01.T01:intron 30.0%
! TAAGCTACTTGATAGCTTAT+AGG - Chr1:78819422-78819441 MsG0180004492.01.T01:intron 30.0%
! TTATGTGCAAACTGTTGATT+TGG - Chr1:78818213-78818232 MsG0180004492.01.T01:intron 30.0%
! TTTTTGTTACAAGGAACATG+CGG - Chr1:78822216-78822235 MsG0180004492.01.T01:five_prime_UTR 30.0%
!! AACCATACAAAAAGTACCTA+AGG + Chr1:78818603-78818622 None:intergenic 30.0%
!! ATTTGTTGTGCCTAACATAT+AGG - Chr1:78821695-78821714 MsG0180004492.01.T01:intron 30.0%
!! CGTTTTCTTTAATTTTTGCG+AGG - Chr1:78821009-78821028 MsG0180004492.01.T01:intron 30.0%
!! CTATGATTTTGGAAGTGAAA+GGG + Chr1:78816126-78816145 None:intergenic 30.0%
!! TCTATGATTTTGGAAGTGAA+AGG + Chr1:78816127-78816146 None:intergenic 30.0%
!! TTCAAAGTACCGTATGTATT+GGG - Chr1:78816821-78816840 MsG0180004492.01.T01:intron 30.0%
!! TTCCTTAGGTACTTTTTGTA+TGG - Chr1:78818598-78818617 MsG0180004492.01.T01:intron 30.0%
!! TTTCAAAGTACCGTATGTAT+TGG - Chr1:78816820-78816839 MsG0180004492.01.T01:intron 30.0%
!! TTTGGTTTGATTCTATTTGC+TGG + Chr1:78821344-78821363 None:intergenic 30.0%
!!! AGGTACCTTTTTTTGTTACA+AGG - Chr1:78822207-78822226 MsG0180004492.01.T01:five_prime_UTR 30.0%
!!! ATTTCTTCTTTTAGTTTCCC+TGG - Chr1:78816180-78816199 MsG0180004492.01.T01:CDS 30.0%
!!! GAATTTTTTTGAAAGGGAGA+TGG - Chr1:78820468-78820487 MsG0180004492.01.T01:intron 30.0%
!!! TACACCATATTTTGACAACT+AGG + Chr1:78821210-78821229 None:intergenic 30.0%
AAAAACGACATAAGAAGGAG+AGG - Chr1:78816695-78816714 MsG0180004492.01.T01:intron 35.0%
AAAAAGCAAAGGAGGATTGA+TGG - Chr1:78816216-78816235 MsG0180004492.01.T01:CDS 35.0%
AAACTTAGACACGTTTCCTT+AGG - Chr1:78818584-78818603 MsG0180004492.01.T01:intron 35.0%
AAAGCAAAATACCCTAGTCA+TGG + Chr1:78815765-78815784 None:intergenic 35.0%
AACTAAATCAACGCTCTGTT+AGG - Chr1:78819378-78819397 MsG0180004492.01.T01:intron 35.0%
AAGAGGTGAAAATTCTACCT+TGG - Chr1:78819105-78819124 MsG0180004492.01.T01:intron 35.0%
AATGAGAAAATGGAACCTGT+TGG + Chr1:78821651-78821670 None:intergenic 35.0%
ACATAAGAAGGAGAGGTAAT+GGG - Chr1:78816702-78816721 MsG0180004492.01.T01:intron 35.0%
AGGGTAACCTTATAGTGAAT+TGG - Chr1:78816100-78816119 MsG0180004492.01.T01:CDS 35.0%
ATCAGTAGAAAAAGCAAAGG+AGG - Chr1:78816208-78816227 MsG0180004492.01.T01:CDS 35.0%
ATCCACCTCTAATTACTCAT+GGG + Chr1:78817599-78817618 None:intergenic 35.0%
ATCCATTCCAACAAACAACA+TGG - Chr1:78815434-78815453 MsG0180004492.01.T01:three_prime_UTR 35.0%
ATTCAAAAGAAGGGACGTTT+AGG - Chr1:78821107-78821126 MsG0180004492.01.T01:intron 35.0%
ATTGGAAGCTAAGAAGGATA+AGG + Chr1:78821437-78821456 None:intergenic 35.0%
CAACAGAAACATTGAAGAGA+GGG + Chr1:78819019-78819038 None:intergenic 35.0%
CATGATATGAGAGTCAACAA+TGG - Chr1:78820021-78820040 MsG0180004492.01.T01:intron 35.0%
CCATCCTAGTTGTCAAAATA+TGG - Chr1:78821203-78821222 MsG0180004492.01.T01:intron 35.0%
CCTATCAGTAGAAAAAGCAA+AGG - Chr1:78816205-78816224 MsG0180004492.01.T01:CDS 35.0%
CTTCATGTATTTACATTGCC+TGG - Chr1:78819230-78819249 MsG0180004492.01.T01:intron 35.0%
GACATATATGATTGACAGCA+CGG - Chr1:78817944-78817963 MsG0180004492.01.T01:intron 35.0%
GATGACCAAAAGTAAAAGCA+AGG + Chr1:78817201-78817220 None:intergenic 35.0%
GATTTGTGTTTGGATCTGTT+TGG - Chr1:78815828-78815847 MsG0180004492.01.T01:intron 35.0%
GCAATGTAAATACATGAAGC+AGG + Chr1:78819229-78819248 None:intergenic 35.0%
GCTAAAAAATTGCAGCCAAT+CGG - Chr1:78818164-78818183 MsG0180004492.01.T01:intron 35.0%
GGCATAGGATTAATAGATGT+GGG + Chr1:78819997-78820016 None:intergenic 35.0%
GGCGAATTAAAGAAGAAGAA+GGG + Chr1:78821384-78821403 None:intergenic 35.0%
GTCAAGAAGTTATTCTTGTC+TGG - Chr1:78820247-78820266 MsG0180004492.01.T01:CDS 35.0%
GTTAGAATTGGAAGCTAAGA+AGG + Chr1:78821443-78821462 None:intergenic 35.0%
TAAGAAGGATAAGGTGGAAT+AGG + Chr1:78821428-78821447 None:intergenic 35.0%
TAGGCCCAGATCTAAATATT+GGG - Chr1:78816845-78816864 MsG0180004492.01.T01:intron 35.0%
TAGTTATCAATGCGGAAATG+CGG + Chr1:78817156-78817175 None:intergenic 35.0%
TCCAACAAACAACATGGATA+GGG - Chr1:78815440-78815459 MsG0180004492.01.T01:three_prime_UTR 35.0%
TCCAACTTTAGTAGCATTAG+AGG + Chr1:78817456-78817475 None:intergenic 35.0%
TCCTCTAATGCTACTAAAGT+TGG - Chr1:78817452-78817471 MsG0180004492.01.T01:intron 35.0%
TGGCATAGGATTAATAGATG+TGG + Chr1:78819998-78820017 None:intergenic 35.0%
TGTTGAAACGTTAAGAGCAA+AGG - Chr1:78819197-78819216 MsG0180004492.01.T01:intron 35.0%
TTCCAACAAACAACATGGAT+AGG - Chr1:78815439-78815458 MsG0180004492.01.T01:three_prime_UTR 35.0%
TTCGTATCGTCAAAATTGAG+CGG + Chr1:78819679-78819698 None:intergenic 35.0%
TTGACTCTCATATCATGACA+TGG + Chr1:78820018-78820037 None:intergenic 35.0%
TTGTTAGATAGCAGCTATAG+TGG - Chr1:78818303-78818322 MsG0180004492.01.T01:intron 35.0%
! AAAATGTTTGGTTCATGCGA+GGG - Chr1:78820437-78820456 MsG0180004492.01.T01:intron 35.0%
! ACTGTGTCAAGAGTTTTCAA+TGG + Chr1:78821258-78821277 None:intergenic 35.0%
! AGGAAAGTTGATCAGATCTA+TGG - Chr1:78817545-78817564 MsG0180004492.01.T01:intron 35.0%
! ATATCTGACATGTTCTGGTT+TGG - Chr1:78819777-78819796 MsG0180004492.01.T01:intron 35.0%
! ATCCATGTTGTTTGTTGGAA+TGG + Chr1:78815439-78815458 None:intergenic 35.0%
! ATCTGTTTGGTTCATGTGTT+TGG - Chr1:78815841-78815860 MsG0180004492.01.T01:intron 35.0%
! ATGAAACAATGGGTTCAATC+CGG + Chr1:78819860-78819879 None:intergenic 35.0%
! CATTTCCGCATTGATAACTA+TGG - Chr1:78817156-78817175 MsG0180004492.01.T01:intron 35.0%
! GCATGAACCAAACATTTTGA+GGG + Chr1:78820435-78820454 None:intergenic 35.0%
! GCTTTGACTTATGAGAAACT+AGG - Chr1:78816776-78816795 MsG0180004492.01.T01:intron 35.0%
! GGGTATAAGCTAGTTGATAT+AGG - Chr1:78819443-78819462 MsG0180004492.01.T01:intron 35.0%
! GGTTCATGTGTTTGGTAATT+GGG - Chr1:78815849-78815868 MsG0180004492.01.T01:intron 35.0%
! GGTTCCATTTTCTCATTCTT+AGG - Chr1:78821654-78821673 MsG0180004492.01.T01:intron 35.0%
! GTTCTAAATGCATAACACCA+TGG + Chr1:78822126-78822145 None:intergenic 35.0%
! GTTTGAAATGTTCTGAATCG+CGG + Chr1:78818463-78818482 None:intergenic 35.0%
! GTTTGAGACCGAGTTAAAAA+AGG - Chr1:78821971-78821990 MsG0180004492.01.T01:CDS 35.0%
! TAAACGTCCCTTCTTTTGAA+TGG + Chr1:78821108-78821127 None:intergenic 35.0%
! TACATACGGTACTTTGAAAG+AGG + Chr1:78816819-78816838 None:intergenic 35.0%
! TATGGGTTCTGATATTCTTC+TGG - Chr1:78815908-78815927 MsG0180004492.01.T01:intron 35.0%
! TGGTTCATGTGTTTGGTAAT+TGG - Chr1:78815848-78815867 MsG0180004492.01.T01:intron 35.0%
! TTACTCGTTTTACGTCAGTA+GGG + Chr1:78817971-78817990 None:intergenic 35.0%
! TTTAACTGAGTTGGAAACAC+AGG - Chr1:78818957-78818976 MsG0180004492.01.T01:intron 35.0%
!! GCACCAAACCAATTTAGTTT+TGG - Chr1:78820708-78820727 MsG0180004492.01.T01:intron 35.0%
!! GGTTGATAGAAATGATGATG+TGG + Chr1:78819976-78819995 None:intergenic 35.0%
!! GTCTCTATTTTTCTTCTTCG+TGG - Chr1:78822178-78822197 MsG0180004492.01.T01:five_prime_UTR 35.0%
!!! AACAATGGTTTTTTCTGCAC+AGG + Chr1:78817859-78817878 None:intergenic 35.0%
!!! AGGGGGAGAATTTTTTTGAA+AGG - Chr1:78820461-78820480 MsG0180004492.01.T01:intron 35.0%
!!! CCATATTTTGACAACTAGGA+TGG + Chr1:78821206-78821225 None:intergenic 35.0%
!!! CCTTTGCTTTTTCTACTGAT+AGG + Chr1:78816208-78816227 None:intergenic 35.0%
!!! GAAAGTGTTGTCTCCATTTT+TGG + Chr1:78821362-78821381 None:intergenic 35.0%
!!! GGGGGAGAATTTTTTTGAAA+GGG - Chr1:78820462-78820481 MsG0180004492.01.T01:intron 35.0%
!!! TTTTTTGTAAGCCAGACCTA+AGG + Chr1:78819298-78819317 None:intergenic 35.0%
AAACTTGGGTGCATTTCCTT+AGG + Chr1:78818719-78818738 None:intergenic 40.0%
AACTGTCAAAAGCTTCCAAC+AGG - Chr1:78821633-78821652 MsG0180004492.01.T01:intron 40.0%
AGCAGTAAATTGCCATCTTG+TGG - Chr1:78820216-78820235 MsG0180004492.01.T01:CDS 40.0%
AGTAAAACGCTTTGTGCTTC+TGG + Chr1:78821503-78821522 None:intergenic 40.0%
ATATGAGAGTCAACAATGGG+TGG - Chr1:78820025-78820044 MsG0180004492.01.T01:intron 40.0%
ATCAGTAAGACGCTTTACCA+AGG + Chr1:78819125-78819144 None:intergenic 40.0%
ATCGTCAAAATTGAGCGGTT+TGG + Chr1:78819674-78819693 None:intergenic 40.0%
ATGAAGAGATTGGAAGCCTA+GGG + Chr1:78821405-78821424 None:intergenic 40.0%
ATGCCTGACATGTCATCAAT+GGG - Chr1:78819883-78819902 MsG0180004492.01.T01:CDS 40.0%
ATTCCCCAAACGAAGATATG+GGG + Chr1:78820372-78820391 None:intergenic 40.0%
ATTTACTGCTCTCCATTAGG+AGG + Chr1:78820206-78820225 None:intergenic 40.0%
CAGGCATGACATGAAACAAT+GGG + Chr1:78819870-78819889 None:intergenic 40.0%
CATAAGAAGGAGAGGTAATG+GGG - Chr1:78816703-78816722 MsG0180004492.01.T01:intron 40.0%
CATCCACCTCTAATTACTCA+TGG + Chr1:78817600-78817619 None:intergenic 40.0%
CATTCCCCAAACGAAGATAT+GGG + Chr1:78820373-78820392 None:intergenic 40.0%
CATTGCCTGGTTAAAAACTG+TGG - Chr1:78819243-78819262 MsG0180004492.01.T01:intron 40.0%
CCAACAGAAACATTGAAGAG+AGG + Chr1:78819020-78819039 None:intergenic 40.0%
CCGATATTCTTCGGAATCAA+CGG + Chr1:78815699-78815718 None:intergenic 40.0%
CCGCTTTCAAATCCACAAAT+CGG + Chr1:78816540-78816559 None:intergenic 40.0%
CTAAACAAGTTCCTTAGGTC+TGG - Chr1:78819284-78819303 MsG0180004492.01.T01:intron 40.0%
CTAATAGCTGTGCCGAAATT+CGG - Chr1:78816315-78816334 MsG0180004492.01.T01:CDS 40.0%
CTACTGACGTAAAACGAGTA+AGG - Chr1:78817970-78817989 MsG0180004492.01.T01:intron 40.0%
CTAGGCCCAGATCTAAATAT+TGG - Chr1:78816844-78816863 MsG0180004492.01.T01:intron 40.0%
CTCATATCATGACATGGCAT+AGG + Chr1:78820012-78820031 None:intergenic 40.0%
CTTCTTCTTTAATTCGCCCT+AGG - Chr1:78821386-78821405 MsG0180004492.01.T01:intron 40.0%
GAAAGGGCCAATTCACTATA+AGG + Chr1:78816110-78816129 None:intergenic 40.0%
GAAGAAGAAGAACTGCAGTA+AGG - Chr1:78816748-78816767 MsG0180004492.01.T01:intron 40.0%
GAATGTGTGTGTGACGATAA+TGG + Chr1:78815397-78815416 None:intergenic 40.0%
GACATAAGAAGGAGAGGTAA+TGG - Chr1:78816701-78816720 MsG0180004492.01.T01:intron 40.0%
GACCAAAAGTAAAAGCAAGG+AGG + Chr1:78817198-78817217 None:intergenic 40.0%
GAGACTGTGAAAAGAGTTAC+CGG - Chr1:78819838-78819857 MsG0180004492.01.T01:intron 40.0%
GCAATTTACTGCTCTCCATT+AGG + Chr1:78820209-78820228 None:intergenic 40.0%
GGGCGAATTAAAGAAGAAGA+AGG + Chr1:78821385-78821404 None:intergenic 40.0%
GTGGAATAGGATGAAGAGAT+TGG + Chr1:78821415-78821434 None:intergenic 40.0%
TATGAGAGTCAACAATGGGT+GGG - Chr1:78820026-78820045 MsG0180004492.01.T01:intron 40.0%
TCAGGCATGACATGAAACAA+TGG + Chr1:78819871-78819890 None:intergenic 40.0%
TCCAAATGAAAGGTCTTTGG+TGG - Chr1:78816351-78816370 MsG0180004492.01.T01:intron 40.0%
TCCACCTCTAATTACTCATG+GGG + Chr1:78817598-78817617 None:intergenic 40.0%
TCCAGAGAAAATGGTTGAAG+TGG + Chr1:78816593-78816612 None:intergenic 40.0%
TCCTGCAATAACAACAAGCT+CGG + Chr1:78821554-78821573 None:intergenic 40.0%
TCTGAAGAGTAAGCTGAATC+AGG - Chr1:78815724-78815743 MsG0180004492.01.T01:intron 40.0%
TGACTAAAGCAACCACAAGA+TGG + Chr1:78820231-78820250 None:intergenic 40.0%
TGATGGCATGAACCGTTAAT+AGG - Chr1:78816233-78816252 MsG0180004492.01.T01:CDS 40.0%
TGCTTAATGAACCAAGTGAC+AGG - Chr1:78818138-78818157 MsG0180004492.01.T01:intron 40.0%
TGTTGGAATGGATCAACTGA+TGG + Chr1:78815427-78815446 None:intergenic 40.0%
TTAGTAGCATTAGAGGACTG+TGG + Chr1:78817449-78817468 None:intergenic 40.0%
TTTACTTGCAACGCCTTCTT+CGG - Chr1:78821517-78821536 MsG0180004492.01.T01:intron 40.0%
TTTCTTCTTCGTGGTAGTTG+AGG - Chr1:78822187-78822206 MsG0180004492.01.T01:five_prime_UTR 40.0%
TTTGTGGATTTGAAAGCGGA+TGG - Chr1:78816541-78816560 MsG0180004492.01.T01:intron 40.0%
! AATGAAAGTGTAGGTGGAGA+TGG + Chr1:78817233-78817252 None:intergenic 40.0%
! ACACTCATTTGTTCGACTTG+AGG - Chr1:78818831-78818850 MsG0180004492.01.T01:intron 40.0%
! ACCCTATCCATGTTGTTTGT+TGG + Chr1:78815444-78815463 None:intergenic 40.0%
! ATAAGAAGGAGAGGTAATGG+GGG - Chr1:78816704-78816723 MsG0180004492.01.T01:intron 40.0%
! CAAAATGTTTGGTTCATGCG+AGG - Chr1:78820436-78820455 MsG0180004492.01.T01:intron 40.0%
! CCGATTTGTGGATTTGAAAG+CGG - Chr1:78816537-78816556 MsG0180004492.01.T01:intron 40.0%
! CCTCTCTTCAATGTTTCTGT+TGG - Chr1:78819017-78819036 MsG0180004492.01.T01:intron 40.0%
! CGCATGAACCAAACATTTTG+AGG + Chr1:78820436-78820455 None:intergenic 40.0%
! CTTACTCGTTTTACGTCAGT+AGG + Chr1:78817972-78817991 None:intergenic 40.0%
! CTTGATGATCCACTTGTTGA+TGG + Chr1:78817891-78817910 None:intergenic 40.0%
! GCACAAAATGAAAGTGTAGG+TGG + Chr1:78817239-78817258 None:intergenic 40.0%
! GTTTGCCACAGTTTTTAACC+AGG + Chr1:78819251-78819270 None:intergenic 40.0%
! TAATGGTGGAAATGAGACAG+AGG + Chr1:78815380-78815399 None:intergenic 40.0%
! TTCCTTAGGTGCTTTTCGTA+CGG + Chr1:78818705-78818724 None:intergenic 40.0%
! TTTTCTACTGATAGGAGCCA+GGG + Chr1:78816200-78816219 None:intergenic 40.0%
! TTTTTCTACTGATAGGAGCC+AGG + Chr1:78816201-78816220 None:intergenic 40.0%
!! ACCAAAGTACACTGATTCTG+CGG - Chr1:78819149-78819168 MsG0180004492.01.T01:intron 40.0%
!! CCGTTGATTCCGAAGAATAT+CGG - Chr1:78815696-78815715 MsG0180004492.01.T01:CDS 40.0%
!! CGTATAGAAACTTTGGAACC+CGG - Chr1:78816910-78816929 MsG0180004492.01.T01:intron 40.0%
!! CGTTGATTCCGAAGAATATC+GGG - Chr1:78815697-78815716 MsG0180004492.01.T01:CDS 40.0%
!! GTCCTCCTTGCTTTTACTTT+TGG - Chr1:78817193-78817212 MsG0180004492.01.T01:intron 40.0%
!! TATAGTGGTGCTATACTGCT+GGG - Chr1:78818318-78818337 MsG0180004492.01.T01:intron 40.0%
!! TTTTTAGCATGCCTGTCACT+TGG + Chr1:78818152-78818171 None:intergenic 40.0%
!!! AATGGTTTTTTCTGCACAGG+CGG + Chr1:78817856-78817875 None:intergenic 40.0%
AAACTCCTTTGCTGCCTACA+AGG + Chr1:78821955-78821974 None:intergenic 45.0%
AACAATGCAGCAGTTGTAGG+TGG - Chr1:78820080-78820099 MsG0180004492.01.T01:intron 45.0%
AACCAAAAATTGGTGCGGAG+CGG + Chr1:78817120-78817139 None:intergenic 45.0%
AATCCGCAAACTAACAACCG+TGG - Chr1:78821284-78821303 MsG0180004492.01.T01:intron 45.0%
ACAATGCAGCAGTTGTAGGT+GGG - Chr1:78820081-78820100 MsG0180004492.01.T01:intron 45.0%
ACCGCAGAATCAGTGTACTT+TGG + Chr1:78819153-78819172 None:intergenic 45.0%
AGTACCGTATGTATTGGGCT+AGG - Chr1:78816826-78816845 MsG0180004492.01.T01:intron 45.0%
AGTTGTAGGTGGGAACAAGA+TGG - Chr1:78820091-78820110 MsG0180004492.01.T01:intron 45.0%
ATCCGCAAACTAACAACCGT+GGG - Chr1:78821285-78821304 MsG0180004492.01.T01:intron 45.0%
CAACAGAGGAAAGAAGGAGA+AGG + Chr1:78815606-78815625 None:intergenic 45.0%
CAGAACAGCCCGATATTCTT+CGG + Chr1:78815708-78815727 None:intergenic 45.0%
CATCTGCTGAATTGTCTGAG+GGG + Chr1:78819930-78819949 None:intergenic 45.0%
CATGCCTGACATGTCATCAA+TGG - Chr1:78819882-78819901 MsG0180004492.01.T01:CDS 45.0%
CATTCTCAGGAAAAGTGGCT+AGG + Chr1:78817424-78817443 None:intergenic 45.0%
CCAAACAATGCAGCAGTTGT+AGG - Chr1:78820077-78820096 MsG0180004492.01.T01:intron 45.0%
CCAACTTCGGGCAATTTCTT+AGG + Chr1:78821598-78821617 None:intergenic 45.0%
CCTAAGAAATTGCCCGAAGT+TGG - Chr1:78821595-78821614 MsG0180004492.01.T01:intron 45.0%
CCTACAACTGCTGCATTGTT+TGG + Chr1:78820080-78820099 None:intergenic 45.0%
CCTGCAATAACAACAAGCTC+GGG + Chr1:78821553-78821572 None:intergenic 45.0%
CTGACGTAAAACGAGTAAGG+AGG - Chr1:78817973-78817992 MsG0180004492.01.T01:intron 45.0%
CTTGAGGACTCTTTCTACCT+TGG - Chr1:78818847-78818866 MsG0180004492.01.T01:intron 45.0%
GAAGAAGAACTGCAGTAAGG+TGG - Chr1:78816751-78816770 MsG0180004492.01.T01:intron 45.0%
GATGAAGAGATTGGAAGCCT+AGG + Chr1:78821406-78821425 None:intergenic 45.0%
GCAGGCTCATTTAACTGAGT+TGG - Chr1:78818948-78818967 MsG0180004492.01.T01:intron 45.0%
GCATCTGCTGAATTGTCTGA+GGG + Chr1:78819931-78819950 None:intergenic 45.0%
GCATTCCCCAAACGAAGATA+TGG + Chr1:78820374-78820393 None:intergenic 45.0%
GCCACCAAAGACCTTTCATT+TGG + Chr1:78816355-78816374 None:intergenic 45.0%
GCTTGGAACATCTTCAGAAG+CGG - Chr1:78820147-78820166 MsG0180004492.01.T01:intron 45.0%
GGAAGCTAAGAAGGATAAGG+TGG + Chr1:78821434-78821453 None:intergenic 45.0%
GGCCAAACCAAAAATTGGTG+CGG + Chr1:78817125-78817144 None:intergenic 45.0%
GTTGTAGGTGGGAACAAGAT+GGG - Chr1:78820092-78820111 MsG0180004492.01.T01:intron 45.0%
TATGCAGGATCTGTTCCTTC+TGG - Chr1:78817769-78817788 MsG0180004492.01.T01:CDS 45.0%
TGAAACCTTGTAGGCAGCAA+AGG - Chr1:78821947-78821966 MsG0180004492.01.T01:CDS 45.0%
TGATGGCCTAATGGCAACAA+TGG + Chr1:78817874-78817893 None:intergenic 45.0%
TGCACCCCATATCTTCGTTT+GGG - Chr1:78820365-78820384 MsG0180004492.01.T01:intron 45.0%
TGCATCTGCTGAATTGTCTG+AGG + Chr1:78819932-78819951 None:intergenic 45.0%
TGCCTGACATGTCATCAATG+GGG - Chr1:78819884-78819903 MsG0180004492.01.T01:CDS 45.0%
TGGTCCATTCTCAGGAAAAG+TGG + Chr1:78817429-78817448 None:intergenic 45.0%
TGTCAGCAACAGAGGAAAGA+AGG + Chr1:78815612-78815631 None:intergenic 45.0%
TGTTACAAGGAACATGCGGT+AGG - Chr1:78822220-78822239 MsG0180004492.01.T01:five_prime_UTR 45.0%
TTCCTCTGTTGCTGACAACA+CGG - Chr1:78815615-78815634 MsG0180004492.01.T01:CDS 45.0%
TTGGCCCCATGAGTAATTAG+AGG - Chr1:78817591-78817610 MsG0180004492.01.T01:intron 45.0%
TTGGTTCATTAAGCAGAGCG+AGG + Chr1:78818133-78818152 None:intergenic 45.0%
TTTCCAATAGAGAGTCAGCC+AGG - Chr1:78818908-78818927 MsG0180004492.01.T01:intron 45.0%
! ACGGTACTTTGAAAGAGGCT+AGG + Chr1:78816814-78816833 None:intergenic 45.0%
! ATCCCCATTGATGACATGTC+AGG + Chr1:78819889-78819908 None:intergenic 45.0%
! ATGTTCTGAATCGCGGATAG+CGG + Chr1:78818456-78818475 None:intergenic 45.0%
! CATGGATAGGGTATTCTCAG+TGG - Chr1:78815452-78815471 MsG0180004492.01.T01:three_prime_UTR 45.0%
! GCCACTTCAACCATTTTCTC+TGG - Chr1:78816589-78816608 MsG0180004492.01.T01:intron 45.0%
! TCTGATGATGACGAAGCTGA+GGG - Chr1:78817918-78817937 MsG0180004492.01.T01:intron 45.0%
! TGTGTGTGTGACGATAATGG+TGG + Chr1:78815394-78815413 None:intergenic 45.0%
!! AACCGTACGAAAAGCACCTA+AGG - Chr1:78818700-78818719 MsG0180004492.01.T01:intron 45.0%
!! ACGGTTGTTAGTTTGCGGAT+TGG + Chr1:78821285-78821304 None:intergenic 45.0%
!! CGGACACTATTTTAGAGACG+CGG + Chr1:78817100-78817119 None:intergenic 45.0%
!! CGGTTGTTAGTTTGCGGATT+GGG + Chr1:78821284-78821303 None:intergenic 45.0%
!! CTATAGTGGTGCTATACTGC+TGG - Chr1:78818317-78818336 MsG0180004492.01.T01:intron 45.0%
!! GTGCAAACTGTTGATTTGGC+TGG - Chr1:78818217-78818236 MsG0180004492.01.T01:intron 45.0%
!! TCCACTTGTTGATGGCCTAA+TGG + Chr1:78817883-78817902 None:intergenic 45.0%
!! TGCTGGTTCTGCTAAATGAG+TGG + Chr1:78821327-78821346 None:intergenic 45.0%
!! TTGTTAGTTTGCGGATTGGG+TGG + Chr1:78821281-78821300 None:intergenic 45.0%
!!! CTAGCCACTTTTCCTGAGAA+TGG - Chr1:78817422-78817441 MsG0180004492.01.T01:intron 45.0%
!!! CTCCGCACCAATTTTTGGTT+TGG - Chr1:78817120-78817139 MsG0180004492.01.T01:intron 45.0%
!!! TTTTTTCTGCACAGGCGGTA+TGG + Chr1:78817851-78817870 None:intergenic 45.0%
!!! AACTAATTTTTTTTAAAATT+CGG - Chr1:78820945-78820964 MsG0180004492.01.T01:intron 5.0%
AACCGTGTTGTCAGCAACAG+AGG + Chr1:78815620-78815639 None:intergenic 50.0%
ACGAAATCCCCGACAACCTA+TGG - Chr1:78815475-78815494 MsG0180004492.01.T01:three_prime_UTR 50.0%
ATAGGTGGATCGCTTCCAGA+AGG + Chr1:78817787-78817806 None:intergenic 50.0%
ATGGGGATGCCAGCATTTGA+TGG - Chr1:78819901-78819920 MsG0180004492.01.T01:intron 50.0%
CATCTTGGAGGATTCATCGC+CGG + Chr1:78815529-78815548 None:intergenic 50.0%
CATGAATCTGCGGTGACCAT+AGG + Chr1:78815494-78815513 None:intergenic 50.0%
CTTTCTTCTTCTTGAGCGCC+TGG + Chr1:78818929-78818948 None:intergenic 50.0%
GAAGAACTGCAGTAAGGTGG+TGG - Chr1:78816754-78816773 MsG0180004492.01.T01:intron 50.0%
GAGACAGAGGTGGGGTATAT+CGG + Chr1:78815367-78815386 None:intergenic 50.0%
GAGGAAAGAAGGAGAAGGTG+TGG + Chr1:78815601-78815620 None:intergenic 50.0%
GAGGTGGTCCATTGGCAAAA+CGG + Chr1:78815670-78815689 None:intergenic 50.0%
GATTTGAAAGCGGATGGAGC+GGG - Chr1:78816547-78816566 MsG0180004492.01.T01:intron 50.0%
GCACCCCATATCTTCGTTTG+GGG - Chr1:78820366-78820385 MsG0180004492.01.T01:intron 50.0%
GCCATTAGGCCATCAACAAG+TGG - Chr1:78817879-78817898 MsG0180004492.01.T01:intron 50.0%
GCCCCATGAGTAATTAGAGG+TGG - Chr1:78817594-78817613 MsG0180004492.01.T01:intron 50.0%
GCGCTCAAGAAGAAGAAAGC+AGG - Chr1:78818930-78818949 MsG0180004492.01.T01:intron 50.0%
GGATCTCAGCCCATTTCTGA+AGG - Chr1:78817473-78817492 MsG0180004492.01.T01:intron 50.0%
GGATTTGAAAGCGGATGGAG+CGG - Chr1:78816546-78816565 MsG0180004492.01.T01:intron 50.0%
GGTGGAAATGAGACAGAGGT+GGG + Chr1:78815376-78815395 None:intergenic 50.0%
GTGCACCCCATATCTTCGTT+TGG - Chr1:78820364-78820383 MsG0180004492.01.T01:intron 50.0%
GTGGAAATGAGACAGAGGTG+GGG + Chr1:78815375-78815394 None:intergenic 50.0%
TACTGCTCTCCATTAGGAGG+AGG + Chr1:78820203-78820222 None:intergenic 50.0%
TCACCGCAGATTCATGTCAC+CGG - Chr1:78815498-78815517 MsG0180004492.01.T01:three_prime_UTR 50.0%
TCTTGTGGACCTCCTCCTAA+TGG - Chr1:78820191-78820210 MsG0180004492.01.T01:intron 50.0%
TGATGTGGATCGTCTTGCAC+AGG + Chr1:78819961-78819980 None:intergenic 50.0%
TGCAACGCCTTCTTCGGATT+AGG - Chr1:78821523-78821542 MsG0180004492.01.T01:intron 50.0%
TGCTATACTGCTGGGTGTAG+CGG - Chr1:78818326-78818345 MsG0180004492.01.T01:intron 50.0%
TGGGCCTAGCCCAATACATA+CGG + Chr1:78816833-78816852 None:intergenic 50.0%
TGGTGGAAATGAGACAGAGG+TGG + Chr1:78815377-78815396 None:intergenic 50.0%
! CACCCACGGTTGTTAGTTTG+CGG + Chr1:78821290-78821309 None:intergenic 50.0%
! CAGCTTCTTGCAGAAAGCGT+TGG + Chr1:78815578-78815597 None:intergenic 50.0%
! CATCTTCAGAAGCGGATTCG+TGG - Chr1:78820155-78820174 MsG0180004492.01.T01:intron 50.0%
! CGGATATAGCCCTTTTGTGC+AGG - Chr1:78818410-78818429 MsG0180004492.01.T01:intron 50.0%
! GTCTGATGATGACGAAGCTG+AGG - Chr1:78817917-78817936 MsG0180004492.01.T01:intron 50.0%
! GTTTGGTTCATGCGAGGGAA+GGG - Chr1:78820442-78820461 MsG0180004492.01.T01:intron 50.0%
! TGTTCTGAATCGCGGATAGC+GGG + Chr1:78818455-78818474 None:intergenic 50.0%
! TGTTTGGTTCATGCGAGGGA+AGG - Chr1:78820441-78820460 MsG0180004492.01.T01:intron 50.0%
! TTTGGTTCATGCGAGGGAAG+GGG - Chr1:78820443-78820462 MsG0180004492.01.T01:intron 50.0%
! TTTTGCCAATGGACCACCTC+CGG - Chr1:78815670-78815689 MsG0180004492.01.T01:CDS 50.0%
!! AAAGCGTTGGAACGCCCATT+CGG + Chr1:78815565-78815584 None:intergenic 50.0%
!! ACCGTCTTTTGGTGCAGCAT+CGG + Chr1:78815646-78815665 None:intergenic 50.0%
!! ACGCTTTGTGCTTCTGGTTC+TGG + Chr1:78821497-78821516 None:intergenic 50.0%
!! CCCGAGCTTGTTGTTATTGC+AGG - Chr1:78821550-78821569 MsG0180004492.01.T01:intron 50.0%
!! TGTGCTTCTGGTTCTGGTTC+TGG + Chr1:78821491-78821510 None:intergenic 50.0%
!!! GGAGTCGCTGCTCTTGTTTT+CGG - Chr1:78821571-78821590 MsG0180004492.01.T01:intron 50.0%
AAACAGCTCCTCCGTTGCAC+CGG - Chr1:78820117-78820136 MsG0180004492.01.T01:intron 55.0%
AATGGTTGAAGTGGCCGCTC+CGG + Chr1:78816584-78816603 None:intergenic 55.0%
ACCGCAATAGCAGCTGCTAC+AGG + Chr1:78816443-78816462 None:intergenic 55.0%
ATCAATGCGGAAATGCGGCG+AGG + Chr1:78817151-78817170 None:intergenic 55.0%
CTGCGGTGACCATAGGTTGT+CGG + Chr1:78815487-78815506 None:intergenic 55.0%
GAGGACTGTGGTCCATTCTC+AGG + Chr1:78817437-78817456 None:intergenic 55.0%
GAGGGGCTTCCATCAAATGC+TGG + Chr1:78819913-78819932 None:intergenic 55.0%
GATGTTCCAAGCTAGCCACC+CGG + Chr1:78820139-78820158 None:intergenic 55.0%
GCCGATGCTGCACCAAAAGA+CGG - Chr1:78815642-78815661 MsG0180004492.01.T01:CDS 55.0%
GCCTGTAGCAGCTGCTATTG+CGG - Chr1:78816439-78816458 MsG0180004492.01.T01:intron 55.0%
GGCGCGGCCAAACCAAAAAT+TGG + Chr1:78817130-78817149 None:intergenic 55.0%
TAGCAGCTGCTATTGCGGTG+CGG - Chr1:78816444-78816463 MsG0180004492.01.T01:intron 55.0%
TCTGCACAGGCGGTATGGAA+GGG + Chr1:78817846-78817865 None:intergenic 55.0%
TCTTCGGAATCAACGGCCAC+CGG + Chr1:78815692-78815711 None:intergenic 55.0%
TGCGGTGACCATAGGTTGTC+GGG + Chr1:78815486-78815505 None:intergenic 55.0%
TTCTGCACAGGCGGTATGGA+AGG + Chr1:78817847-78817866 None:intergenic 55.0%
TTGGTTCATGCGAGGGAAGG+GGG - Chr1:78820444-78820463 MsG0180004492.01.T01:intron 55.0%
! CTTCAGAAGCGGATTCGTGG+TGG - Chr1:78820158-78820177 MsG0180004492.01.T01:intron 55.0%
! GGCAAAACGGCACCGTCTTT+TGG + Chr1:78815657-78815676 None:intergenic 55.0%
! GTCCGCTCCGCACCAATTTT+TGG - Chr1:78817115-78817134 MsG0180004492.01.T01:intron 55.0%
!! AGGAGAGGTAATGGGGGAGA+AGG - Chr1:78816710-78816729 MsG0180004492.01.T01:intron 55.0%
!!! AGACGGTGCCGTTTTGCCAA+TGG - Chr1:78815659-78815678 MsG0180004492.01.T01:CDS 55.0%
AACAGCTCCTCCGTTGCACC+GGG - Chr1:78820118-78820137 MsG0180004492.01.T01:intron 60.0%
AAGCTAGCCACCCGGTGCAA+CGG + Chr1:78820131-78820150 None:intergenic 60.0%
AGCGCTGCGACTCATCTTGG+AGG + Chr1:78815541-78815560 None:intergenic 60.0%
AGGGATCGCAGGTGGTACCT+TGG + Chr1:78817827-78817846 None:intergenic 60.0%
CACACCCATCCGTGTCAGAG+CGG - Chr1:78816487-78816506 MsG0180004492.01.T01:intron 60.0%
CCGATGCTGCGACCAACTTC+GGG + Chr1:78821610-78821629 None:intergenic 60.0%
CCGCAGATTCATGTCACCGG+CGG - Chr1:78815501-78815520 MsG0180004492.01.T01:three_prime_UTR 60.0%
CCGCCGGTGACATGAATCTG+CGG + Chr1:78815504-78815523 None:intergenic 60.0%
CGCTGCGGTTGCCATGACTA+GGG - Chr1:78815751-78815770 MsG0180004492.01.T01:intron 60.0%
GAGTCGCAGCGCTTCCGAAT+GGG - Chr1:78815548-78815567 MsG0180004492.01.T01:three_prime_UTR 60.0%
GCCGATGCTGCGACCAACTT+CGG + Chr1:78821611-78821630 None:intergenic 60.0%
GCGGTGACCATAGGTTGTCG+GGG + Chr1:78815485-78815504 None:intergenic 60.0%
GCTGAATCAGGCATGCGCTG+CGG - Chr1:78815736-78815755 MsG0180004492.01.T01:intron 60.0%
GGATGGAGCGGGTATGAAGC+AGG - Chr1:78816558-78816577 MsG0180004492.01.T01:intron 60.0%
GGGCACGCCTAATCCGAAGA+AGG + Chr1:78821533-78821552 None:intergenic 60.0%
GGTATGGAAGGGATCGCAGG+TGG + Chr1:78817835-78817854 None:intergenic 60.0%
TCTGACACGGATGGGTGTGG+TGG + Chr1:78816486-78816505 None:intergenic 60.0%
TGAGTCGCAGCGCTTCCGAA+TGG - Chr1:78815547-78815566 MsG0180004492.01.T01:three_prime_UTR 60.0%
! CAGAAGCGGATTCGTGGTGG+CGG - Chr1:78820161-78820180 MsG0180004492.01.T01:intron 60.0%
! CCCGAAGTTGGTCGCAGCAT+CGG - Chr1:78821607-78821626 MsG0180004492.01.T01:intron 60.0%
! CTGACTGTGCCGCTCTGACA+CGG + Chr1:78816499-78816518 None:intergenic 60.0%
! GCGCCTGGCTGACTCTCTAT+TGG + Chr1:78818914-78818933 None:intergenic 60.0%
! TGTGCCGCTCTGACACGGAT+GGG + Chr1:78816494-78816513 None:intergenic 60.0%
!! GGAAGCGCTGCGACTCATCT+TGG + Chr1:78815544-78815563 None:intergenic 60.0%
!! GGTGGCGGTGTCGATTCTTG+TGG - Chr1:78820176-78820195 MsG0180004492.01.T01:intron 60.0%
AGCGGCACAGTCAGGTGGTG+CGG - Chr1:78816505-78816524 MsG0180004492.01.T01:intron 65.0%
ATTCATGTCACCGGCGGCGC+CGG - Chr1:78815507-78815526 MsG0180004492.01.T01:three_prime_UTR 65.0%
CGCTCTGACACGGATGGGTG+TGG + Chr1:78816489-78816508 None:intergenic 65.0%
CGTGTCAGAGCGGCACAGTC+AGG - Chr1:78816497-78816516 MsG0180004492.01.T01:intron 65.0%
GAATCAACGGCCACCGGAGG+TGG + Chr1:78815686-78815705 None:intergenic 65.0%
GCACAGTCAGGTGGTGCGGT+TGG - Chr1:78816509-78816528 MsG0180004492.01.T01:intron 65.0%
GCGCTGCGGTTGCCATGACT+AGG - Chr1:78815750-78815769 MsG0180004492.01.T01:intron 65.0%
GGAGCGGGTATGAAGCAGGC+CGG - Chr1:78816562-78816581 MsG0180004492.01.T01:intron 65.0%
GGCGGTATGGAAGGGATCGC+AGG + Chr1:78817838-78817857 None:intergenic 65.0%
GGGTATGAAGCAGGCCGGAG+CGG - Chr1:78816567-78816586 MsG0180004492.01.T01:intron 65.0%
GGTGCGGCGCGGAAAAAGTG+AGG - Chr1:78816460-78816479 MsG0180004492.01.T01:intron 65.0%
GTCAGAGCGGCACAGTCAGG+TGG - Chr1:78816500-78816519 MsG0180004492.01.T01:intron 65.0%
TCGGAATCAACGGCCACCGG+AGG + Chr1:78815689-78815708 None:intergenic 65.0%
TGCCAATGGACCACCTCCGG+TGG - Chr1:78815673-78815692 MsG0180004492.01.T01:CDS 65.0%
! CTGTGCCGCTCTGACACGGA+TGG + Chr1:78816495-78816514 None:intergenic 65.0%
! GTCAGGTGGTGCGGTTGGTG+CGG - Chr1:78816514-78816533 MsG0180004492.01.T01:intron 65.0%
! GTTGCACCGGGTGGCTAGCT+TGG - Chr1:78820130-78820149 MsG0180004492.01.T01:intron 65.0%
!! CGGTTGGTGCGGCCGATTTG+TGG - Chr1:78816525-78816544 MsG0180004492.01.T01:intron 65.0%
AGCTCCTCCGTTGCACCGGG+TGG - Chr1:78820121-78820140 MsG0180004492.01.T01:intron 70.0%
CTAGCCACCCGGTGCAACGG+AGG + Chr1:78820128-78820147 None:intergenic 70.0%
GCTGCTATTGCGGTGCGGCG+CGG - Chr1:78816449-78816468 MsG0180004492.01.T01:intron 70.0%
GGCCACCGGAGGTGGTCCAT+TGG + Chr1:78815678-78815697 None:intergenic 70.0%
TGCGGAAATGCGGCGAGGCG+CGG + Chr1:78817146-78817165 None:intergenic 70.0%
GGATTCATCGCCGGCGCCGC+CGG + Chr1:78815520-78815539 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 78815346 78822348 78815346 ID=MsG0180004492.01;Name=MsG0180004492.01
Chr1 mRNA 78815346 78822348 78815346 ID=MsG0180004492.01.T01;Parent=MsG0180004492.01;Name=MsG0180004492.01.T01;_AED=0.47;_eAED=0.47;_QI=220|0.6|0.5|1|0.4|0.5|6|269|329
Chr1 exon 78815346 78815734 78815346 ID=MsG0180004492.01.T01:exon:45530;Parent=MsG0180004492.01.T01
Chr1 exon 78816040 78816342 78816040 ID=MsG0180004492.01.T01:exon:45529;Parent=MsG0180004492.01.T01
Chr1 exon 78817662 78817871 78817662 ID=MsG0180004492.01.T01:exon:45528;Parent=MsG0180004492.01.T01
Chr1 exon 78819866 78819918 78819866 ID=MsG0180004492.01.T01:exon:45527;Parent=MsG0180004492.01.T01
Chr1 exon 78820200 78820296 78820200 ID=MsG0180004492.01.T01:exon:45526;Parent=MsG0180004492.01.T01
Chr1 exon 78821922 78822348 78821922 ID=MsG0180004492.01.T01:exon:45525;Parent=MsG0180004492.01.T01
Chr1 five_prime_UTR 78822129 78822348 78822129 ID=MsG0180004492.01.T01:five_prime_utr;Parent=MsG0180004492.01.T01
Chr1 CDS 78821922 78822128 78821922 ID=MsG0180004492.01.T01:cds;Parent=MsG0180004492.01.T01
Chr1 CDS 78820200 78820296 78820200 ID=MsG0180004492.01.T01:cds;Parent=MsG0180004492.01.T01
Chr1 CDS 78819866 78819918 78819866 ID=MsG0180004492.01.T01:cds;Parent=MsG0180004492.01.T01
Chr1 CDS 78817662 78817871 78817662 ID=MsG0180004492.01.T01:cds;Parent=MsG0180004492.01.T01
Chr1 CDS 78816040 78816342 78816040 ID=MsG0180004492.01.T01:cds;Parent=MsG0180004492.01.T01
Chr1 CDS 78815615 78815734 78815615 ID=MsG0180004492.01.T01:cds;Parent=MsG0180004492.01.T01
Chr1 three_prime_UTR 78815346 78815614 78815346 ID=MsG0180004492.01.T01:three_prime_utr;Parent=MsG0180004492.01.T01
Gene Sequence

>MsG0180004492.01.T01

ATGGGCGTTCCAACGCTTTCTGCAAGAAGCTGCCACACCTTCTCCTTCTTTCCTCTGTTGCTGACAACACGGTTTTGCCGATGCTGCACCAAAAGACGGTGCCGTTTTGCCAATGGACCACCTCCGGTGGCCGTTGATTCCGAAGAATATCGGGCTGTTCTGAAGAGTAAGCTGAATCAGGCATGCGCTGCGGTTGCCATGACTAGGGGATCTTTGACTAAATCTCAAGACCTAGCCACTTTTCCTGAGAATGGACCACAGTCCTCTAATGCTACTAAAGTTGGATCTCAGCCCATTTCTGAAGGATCTGTTCCTTCTGGAAGCGATCCACCTATATTACAAGATAAAGATGCCAAGGTAAAGATGGCTGAAGAGACTGTGAAAAGAGTTACCGGATTGAACCCATTGTTTCATGTCATGCCTGACATGTCATCAATGGGGATGCCAGCATTTGATGGAAGCCCCTCAGACAATTCAGCAGATGCAGCTGTTCCTGTGCAAGACGATCCACATCATCATTTCTATCAACCCACATCTATTAATCCTATGCCATGTCATGATATGAGAAATCAAACCAAAAATGGAGACAACACTTTCCCTTCTTCTTCTTTAATTCGCCCTAGGCTTCCAATCTCTTCATCCTATTCCACCTTATCCTTCTTAGCTTCCAATTCTAACAATACATCACTTCTCTTGAAGAAAGCCAGAACCAGAACCAGAAGCACAAAGCGTTTTACTTGCAACGCCTTCTTCGGATTAGGCGTGCCCGAGCTTGTTGTTATTGCAGGAGTCGCTGCTCTTGTTTTCGGTCCTAAGAAATTGCCCGAAGTTGGTCGCAGCATCGGCAAAACTGTCAAAAGCTTCCAACAGGCAGCAAAGGAGTTTGAGACCGAGTTAAAAAAGGAACCTAATTCTACTGAAGAAATTTCTGTTGCGAATGACCAAGAAGATCAAGACAATAATGTTTCTAGTACAAAGGATAGTGTATGA

Protein sequence

>MsG0180004492.01.T01

MGVPTLSARSCHTFSFFPLLLTTRFCRCCTKRRCRFANGPPPVAVDSEEYRAVLKSKLNQACAAVAMTRGSLTKSQDLATFPENGPQSSNATKVGSQPISEGSVPSGSDPPILQDKDAKVKMAEETVKRVTGLNPLFHVMPDMSSMGMPAFDGSPSDNSADAAVPVQDDPHHHFYQPTSINPMPCHDMRNQTKNGDNTFPSSSLIRPRLPISSSYSTLSFLASNSNNTSLLLKKARTRTRSTKRFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEISVANDQEDQDNNVSSTKDSV*