AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045361.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045361.01.T01 MTR_8g070680 92.222 270 18 1 1 270 1 267 1.04e-151 424
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045361.01.T01 AT5G44650 53.650 274 113 5 9 270 9 280 3.58e-87 261

Find 59 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGCTTTCCCTGTTATTAT+AGG 0.272827 8:-58127701 MsG0880045361.01.T01:CDS
GAAATTGAAGGAAGTGTTAA+TGG 0.309366 8:+58133740 None:intergenic
ACAGAAATACCTATAATAAC+AGG 0.315661 8:+58127692 None:intergenic
TTCAACCATACCTCTAAATT+AGG 0.317527 8:+58130752 None:intergenic
TAACTAGGTCGTCTCTTGTT+GGG 0.347526 8:+58131446 None:intergenic
TCTGGGATCCTCAATCATTA+TGG 0.357646 8:+58131513 None:intergenic
GTTAAAGAAAGAAAGATGAT+AGG 0.367891 8:-58133823 MsG0880045361.01.T01:five_prime_UTR
AAAACAGGGACATGTTGTTT+GGG 0.385929 8:-58133362 MsG0880045361.01.T01:CDS
TCATTTCCTCAGCAAGCATC+TGG 0.399823 8:+58130783 None:intergenic
TGGAGAACAGCTCTATCCTT+TGG 0.408900 8:+58130803 None:intergenic
GACCGCATGGCCTAATTTAG+AGG 0.414053 8:-58130762 MsG0880045361.01.T01:intron
AAAATGTTGCTGAAATCAAA+AGG 0.421552 8:-58133478 MsG0880045361.01.T01:CDS
AGACGACCTAGTTACTGCTT+TGG 0.421764 8:-58131437 MsG0880045361.01.T01:CDS
CAAAGAGACTAAACATTGAC+TGG 0.428498 8:-58129093 MsG0880045361.01.T01:CDS
GTAACTAGGTCGTCTCTTGT+TGG 0.444226 8:+58131445 None:intergenic
CTTCTTCCAAAGCAGTAACT+AGG 0.447551 8:+58131431 None:intergenic
AGGGAACGAATGAAAGAATT+CGG 0.467403 8:+58133621 None:intergenic
AGTGCCATACCAGTTCCTAC+TGG 0.473464 8:+58127642 None:intergenic
AGTCTCTTTGCAGCCACTTG+AGG 0.476299 8:+58129106 None:intergenic
CAACTCCCTCCAGTAGGAAC+TGG 0.478013 8:-58127651 MsG0880045361.01.T01:exon
GGGCTATGGAGCACTATACT+TGG 0.497078 8:-58127726 MsG0880045361.01.T01:CDS
TGAAAATGAAGATGCTGACT+TGG 0.499046 8:-58133594 MsG0880045361.01.T01:CDS
TGAGAACAGCGAAAGGTTGA+AGG 0.503708 8:+58133695 None:intergenic
TGGCATTTACTAGGTGAATG+AGG 0.513830 8:-58130834 MsG0880045361.01.T01:intron
AAACAACCCTGGATGATGTC+AGG 0.515990 8:+58127563 None:intergenic
ATGTTCACCTGACATCATCC+AGG 0.520566 8:-58127570 MsG0880045361.01.T01:three_prime_UTR
GGCATTTACTAGGTGAATGA+GGG 0.523119 8:-58130833 MsG0880045361.01.T01:intron
AACAGAAGTGCCTTCAGCAT+TGG 0.528354 8:-58129029 MsG0880045361.01.T01:intron
AAAACTAACCATAATGATTG+AGG 0.531755 8:-58131521 MsG0880045361.01.T01:CDS
AACTAGGTCGTCTCTTGTTG+GGG 0.554479 8:+58131447 None:intergenic
CCCTCCAGTAGGAACTGGTA+TGG 0.555617 8:-58127646 MsG0880045361.01.T01:exon
TGAAAGAATTCGGCGATGAG+TGG 0.563266 8:+58133631 None:intergenic
AAATGTTGCTGAAATCAAAA+GGG 0.563854 8:-58133477 MsG0880045361.01.T01:intron
CTTGGTGAATTGTGTTCCGT+TGG 0.565502 8:+58133661 None:intergenic
GATTGTGAAGATGAAATTGA+AGG 0.574175 8:+58133728 None:intergenic
ATCATCAAGTTGCTGTGTAG+AGG 0.575332 8:+58133565 None:intergenic
CACTGGAATCGATCCTCAAG+TGG 0.582729 8:-58129119 MsG0880045361.01.T01:CDS
GAAGGAAGTGTTAATGGCAA+CGG 0.582871 8:+58133746 None:intergenic
GCGATGAGTGGTGCTAAGCT+TGG 0.592274 8:+58133643 None:intergenic
AGGATCGATTCCAGTGTCAG+TGG 0.595249 8:+58129126 None:intergenic
GCCATACCAGTTCCTACTGG+AGG 0.602146 8:+58127645 None:intergenic
TCTCACTCTCTCTTTACCAA+CGG 0.610252 8:-58133677 MsG0880045361.01.T01:CDS
CAGGGACATGTTGTTTGGGG+AGG 0.610718 8:-58133358 MsG0880045361.01.T01:intron
GAAAATGAAGATGCTGACTT+GGG 0.613265 8:-58133593 MsG0880045361.01.T01:CDS
GAGAGAGTGAGAACAGCGAA+AGG 0.620164 8:+58133688 None:intergenic
AAACAGGGACATGTTGTTTG+GGG 0.623345 8:-58133361 MsG0880045361.01.T01:CDS
GAGTCGTTTAGCAATGGCAG+TGG 0.626055 8:-58133783 MsG0880045361.01.T01:exon
CAGAAATACCTATAATAACA+GGG 0.629810 8:+58127693 None:intergenic
AGCTACGAGTCGTTTAGCAA+TGG 0.630475 8:-58133789 MsG0880045361.01.T01:exon
CGAACTAGCTCAAACAACCC+TGG 0.638471 8:+58127552 None:intergenic
CCATACCAGTTCCTACTGGA+GGG 0.641464 8:+58127646 None:intergenic
GCATTTACTAGGTGAATGAG+GGG 0.641930 8:-58130832 MsG0880045361.01.T01:intron
GAATGAGGGGAAAATTCCAA+AGG 0.648884 8:-58130819 MsG0880045361.01.T01:CDS
TGTTCACCTGACATCATCCA+GGG 0.655898 8:-58127569 MsG0880045361.01.T01:three_prime_UTR
TTGCTGAGGAAATGACCGCA+TGG 0.657890 8:-58130775 MsG0880045361.01.T01:CDS
AAGGAACTGACCAATGCTGA+AGG 0.663019 8:+58129019 None:intergenic
TGTTCTCCAGATGCTTGCTG+AGG 0.668817 8:-58130789 MsG0880045361.01.T01:CDS
AAAGAGACTAAACATTGACT+GGG 0.671069 8:-58129092 MsG0880045361.01.T01:CDS
TACCTCTAAATTAGGCCATG+CGG 0.696225 8:+58130760 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAATTTTTTTTTTCATAAA+AGG + Chr8:58128481-58128500 None:intergenic 10.0%
!!! ACTTCTTATATTTATTTTAT+GGG - Chr8:58131587-58131606 MsG0880045361.01.T01:intron 10.0%
!!! GTAATTTTATATTATAATCA+AGG - Chr8:58132474-58132493 MsG0880045361.01.T01:intron 10.0%
!! AAACTATTAAAAAGATTTAG+AGG + Chr8:58128849-58128868 None:intergenic 15.0%
!! AACATCTAAAAAAAATTGTT+TGG + Chr8:58130866-58130885 None:intergenic 15.0%
!! AATATAAAATTACAGTATCA+TGG + Chr8:58132467-58132486 None:intergenic 15.0%
!! AGAAAATTGGATAAATTATT+AGG + Chr8:58128085-58128104 None:intergenic 15.0%
!! TGATTATATTAAAAATGTAC+AGG + Chr8:58132555-58132574 None:intergenic 15.0%
!! TTCTACATAAGAATTATTAA+TGG + Chr8:58128553-58128572 None:intergenic 15.0%
!!! AGTTTATTTAAAATCTTGTT+TGG - Chr8:58130071-58130090 MsG0880045361.01.T01:intron 15.0%
!!! ATAGTTTTTTTAGTTTTTGT+GGG - Chr8:58133600-58133619 MsG0880045361.01.T01:CDS 15.0%
!!! GACTTCTTATATTTATTTTA+TGG - Chr8:58131586-58131605 MsG0880045361.01.T01:intron 15.0%
!!! GTTTATTTAAAATCTTGTTT+GGG - Chr8:58130072-58130091 MsG0880045361.01.T01:intron 15.0%
!!! TATAGTTTTTTTAGTTTTTG+TGG - Chr8:58133599-58133618 MsG0880045361.01.T01:CDS 15.0%
!!! TCAACAATTAAATTGTATTT+TGG - Chr8:58131891-58131910 MsG0880045361.01.T01:intron 15.0%
!!! TTTAAAATAGTATAATTCGA+AGG - Chr8:58129686-58129705 MsG0880045361.01.T01:intron 15.0%
!!! TTTTTCAATTAAGATTACAA+GGG - Chr8:58128280-58128299 MsG0880045361.01.T01:intron 15.0%
!!! TTTTTTCAATTAAGATTACA+AGG - Chr8:58128279-58128298 MsG0880045361.01.T01:intron 15.0%
!! AAAAACTATACGTTAAGAAA+AGG + Chr8:58133589-58133608 None:intergenic 20.0%
!! AAAATGCATTACAAAATGAA+GGG + Chr8:58127975-58127994 None:intergenic 20.0%
!! AAAGCATAATTTAGATAATC+AGG + Chr8:58130006-58130025 None:intergenic 20.0%
!! AAGCATAATTTAGATAATCA+GGG + Chr8:58130005-58130024 None:intergenic 20.0%
!! AATACAATTCATTATATCAC+TGG + Chr8:58132095-58132114 None:intergenic 20.0%
!! AATCACAAAAATAATCTACA+AGG + Chr8:58132403-58132422 None:intergenic 20.0%
!! AATTCAATTGCTAAAGATAA+TGG + Chr8:58128891-58128910 None:intergenic 20.0%
!! ACAGATTCTATATAAGTTTA+CGG + Chr8:58132512-58132531 None:intergenic 20.0%
!! ACAGTTAAATGAATATAACA+AGG + Chr8:58130936-58130955 None:intergenic 20.0%
!! ACTACATAAATATTGAAGTT+TGG - Chr8:58131131-58131150 MsG0880045361.01.T01:intron 20.0%
!! AGAAGTGAGAAAAAAAAAAT+AGG + Chr8:58131283-58131302 None:intergenic 20.0%
!! AGTAATAAATTGTTAGAAAC+TGG + Chr8:58131919-58131938 None:intergenic 20.0%
!! AGTTTACATTTATAAATCTG+AGG + Chr8:58133190-58133209 None:intergenic 20.0%
!! ATATTAAAAATGTACAGGTA+CGG + Chr8:58132550-58132569 None:intergenic 20.0%
!! CAAACATACAAAAGTTTAAT+TGG - Chr8:58129640-58129659 MsG0880045361.01.T01:intron 20.0%
!! CAAATTAAATTCATTTCTTC+AGG - Chr8:58131435-58131454 MsG0880045361.01.T01:CDS 20.0%
!! CGGTAATAATAAATAACAAT+AGG + Chr8:58129613-58129632 None:intergenic 20.0%
!! CTAAAACTATATAGAATATG+AGG + Chr8:58132753-58132772 None:intergenic 20.0%
!! CTACATAAATATTGAAGTTT+GGG - Chr8:58131132-58131151 MsG0880045361.01.T01:intron 20.0%
!! GAATGAGGATATATTATTAT+TGG + Chr8:58129482-58129501 None:intergenic 20.0%
!! GTTAACATTATTCAAATATG+TGG + Chr8:58130976-58130995 None:intergenic 20.0%
!! TCAGATTTATAAATGTAAAC+TGG - Chr8:58133189-58133208 MsG0880045361.01.T01:intron 20.0%
!! TGTTAGTTATGTCTAAATTT+AGG - Chr8:58131629-58131648 MsG0880045361.01.T01:intron 20.0%
!!! AGAAAAATACATTGATAATG+AGG + Chr8:58132141-58132160 None:intergenic 20.0%
!!! ATTTTTAAGAACTCAGAAAA+TGG + Chr8:58133516-58133535 None:intergenic 20.0%
!!! CATATTCTATATAGTTTTAG+TGG - Chr8:58132753-58132772 MsG0880045361.01.T01:intron 20.0%
!!! CTTTTTAATAGTTTTGTCTA+TGG - Chr8:58128855-58128874 MsG0880045361.01.T01:intron 20.0%
!!! TCAAATTTTAAAACTGACAA+TGG + Chr8:58131557-58131576 None:intergenic 20.0%
!!! TGCTATTTTATTTTTCCTAA+TGG - Chr8:58132189-58132208 MsG0880045361.01.T01:intron 20.0%
!!! TTTGCATATAGAGATTTTTT+GGG + Chr8:58132243-58132262 None:intergenic 20.0%
!!! TTTTATTTTTCCTAATGGAT+AGG - Chr8:58132194-58132213 MsG0880045361.01.T01:intron 20.0%
!!! TTTTGCATATAGAGATTTTT+TGG + Chr8:58132244-58132263 None:intergenic 20.0%
!!! TTTTGTATGTTTGTAATTTG+CGG + Chr8:58129633-58129652 None:intergenic 20.0%
!!! TTTTGTGATTTAGCTTTTTT+TGG - Chr8:58132413-58132432 MsG0880045361.01.T01:intron 20.0%
!!! TTTTTAGATGTTCAAAATCA+TGG - Chr8:58130874-58130893 MsG0880045361.01.T01:intron 20.0%
! AAAACTAACCATAATGATTG+AGG - Chr8:58129870-58129889 MsG0880045361.01.T01:intron 25.0%
! AAAATGTTGCTGAAATCAAA+AGG - Chr8:58127913-58127932 MsG0880045361.01.T01:intron 25.0%
! AAACTATATAGAATATGAGG+AGG + Chr8:58132750-58132769 None:intergenic 25.0%
! AAAGACTTGTATAAGAACTT+AGG - Chr8:58132609-58132628 MsG0880045361.01.T01:intron 25.0%
! AAATGTTGCTGAAATCAAAA+GGG - Chr8:58127914-58127933 MsG0880045361.01.T01:intron 25.0%
! AATCTTTCAAATGAAGTATG+AGG + Chr8:58133367-58133386 None:intergenic 25.0%
! AATTTAGATAATCAGGGATA+TGG + Chr8:58129999-58130018 None:intergenic 25.0%
! AATTTCGATGTCAATTTAGA+AGG + Chr8:58130998-58131017 None:intergenic 25.0%
! ACAGAAATACCTATAATAAC+AGG + Chr8:58133702-58133721 None:intergenic 25.0%
! AGTCAATAAAACTAACAGAA+AGG + Chr8:58130377-58130396 None:intergenic 25.0%
! ATAGTGATGTAAAAAGATAG+CGG - Chr8:58129561-58129580 MsG0880045361.01.T01:intron 25.0%
! ATTACACTTACAATAGAGAA+TGG + Chr8:58131826-58131845 None:intergenic 25.0%
! ATTCTAAATAAATCTCACCA+AGG - Chr8:58130314-58130333 MsG0880045361.01.T01:intron 25.0%
! ATTCTACAGAATGTTATTGA+AGG - Chr8:58129733-58129752 MsG0880045361.01.T01:intron 25.0%
! ATTCTTGCAATATGTTATTG+AGG - Chr8:58133029-58133048 MsG0880045361.01.T01:intron 25.0%
! ATTGAAAATGTAGTTAGTGA+GGG - Chr8:58131200-58131219 MsG0880045361.01.T01:intron 25.0%
! CAAAAGATTTGAAAAGTTGA+AGG + Chr8:58130203-58130222 None:intergenic 25.0%
! CAAAATGCATTACAAAATGA+AGG + Chr8:58127976-58127995 None:intergenic 25.0%
! CAAGTACATTGTTAATAAAG+AGG + Chr8:58132702-58132721 None:intergenic 25.0%
! CAGAAATACCTATAATAACA+GGG + Chr8:58133701-58133720 None:intergenic 25.0%
! CAGATTGAAAATAAATGACT+TGG - Chr8:58130537-58130556 MsG0880045361.01.T01:intron 25.0%
! CCACATGATTTAAATATCTT+AGG + Chr8:58129324-58129343 None:intergenic 25.0%
! CCTAAGATATTTAAATCATG+TGG - Chr8:58129321-58129340 MsG0880045361.01.T01:intron 25.0%
! CTAATTTCGCATAAGAAAAT+TGG + Chr8:58128098-58128117 None:intergenic 25.0%
! CTCTTTATTAACAATGTACT+TGG - Chr8:58132700-58132719 MsG0880045361.01.T01:intron 25.0%
! GAAAATTTAAGCGACTTAAA+TGG + Chr8:58131328-58131347 None:intergenic 25.0%
! GAGAAGAAAAAAAGTGAAAA+GGG + Chr8:58128063-58128082 None:intergenic 25.0%
! GAGGATATATTATTATTGGT+TGG + Chr8:58129478-58129497 None:intergenic 25.0%
! GATGATTCACACATAATTTA+AGG + Chr8:58131804-58131823 None:intergenic 25.0%
! GTGATTCAATTTGTATTGTT+TGG - Chr8:58128187-58128206 MsG0880045361.01.T01:intron 25.0%
! GTTAAAGAAAGAAAGATGAT+AGG - Chr8:58127568-58127587 MsG0880045361.01.T01:three_prime_UTR 25.0%
! TATAATCAAGGAATTTGATG+TGG - Chr8:58132486-58132505 MsG0880045361.01.T01:intron 25.0%
! TATCAATTCAACGATTTCAA+TGG - Chr8:58133159-58133178 MsG0880045361.01.T01:intron 25.0%
! TATGAATCTAGTCATTGAAT+TGG - Chr8:58128582-58128601 MsG0880045361.01.T01:intron 25.0%
! TATGACTAAAAAAAACCGTT+TGG + Chr8:58128413-58128432 None:intergenic 25.0%
! TCAATAACATATTGCAAGAA+TGG + Chr8:58133030-58133049 None:intergenic 25.0%
! TTCTAAATAAATCTCACCAA+GGG - Chr8:58130315-58130334 MsG0880045361.01.T01:intron 25.0%
! TTCTTGCAATATGTTATTGA+GGG - Chr8:58133030-58133049 MsG0880045361.01.T01:intron 25.0%
!! ATAATGGGAATTTATGGTAT+AGG + Chr8:58133258-58133277 None:intergenic 25.0%
!! ATTATATCACTGGTAATGAA+TGG + Chr8:58132085-58132104 None:intergenic 25.0%
!! ATTATGGGATAGTTTTTGAA+TGG - Chr8:58131681-58131700 MsG0880045361.01.T01:intron 25.0%
!! CTATCTTTTTACATCACTAT+TGG + Chr8:58129561-58129580 None:intergenic 25.0%
!! TCTACAAGATTTCATGTTTT+CGG + Chr8:58131461-58131480 None:intergenic 25.0%
!! TGTTATTGAAGGTGTAATTA+TGG - Chr8:58129744-58129763 MsG0880045361.01.T01:intron 25.0%
!! TTGAGAATAATGGGAATTTA+TGG + Chr8:58133264-58133283 None:intergenic 25.0%
!!! GAACATTTGGTCATTTTTTA+GGG - Chr8:58130097-58130116 MsG0880045361.01.T01:intron 25.0%
!!! TAAATAAACTCTAAAGCTTC+TGG + Chr8:58130061-58130080 None:intergenic 25.0%
!!! TGAACATTTGGTCATTTTTT+AGG - Chr8:58130096-58130115 MsG0880045361.01.T01:intron 25.0%
AAAAGACACATTTGAATGAC+AGG + Chr8:58132853-58132872 None:intergenic 30.0%
AAAGAATCATTAGATCATCG+TGG + Chr8:58129831-58129850 None:intergenic 30.0%
AAAGACACATTTGAATGACA+GGG + Chr8:58132852-58132871 None:intergenic 30.0%
AAATCACTTATGAAGCACAA+TGG + Chr8:58132796-58132815 None:intergenic 30.0%
AACGTCTATTGTAGAAATGA+TGG + Chr8:58128996-58129015 None:intergenic 30.0%
AAGAATCATTAGATCATCGT+GGG + Chr8:58129830-58129849 None:intergenic 30.0%
AAGTATGAGGAGATGAATTT+AGG + Chr8:58133354-58133373 None:intergenic 30.0%
AATTCAACGATTTCAATGGT+TGG - Chr8:58133163-58133182 MsG0880045361.01.T01:intron 30.0%
ACAAAAATAATCTACAAGGC+AGG + Chr8:58132399-58132418 None:intergenic 30.0%
ACAACTAATACTCTCAAGTA+AGG + Chr8:58131068-58131087 None:intergenic 30.0%
ATAATCCAACTCATTGTGTT+TGG + Chr8:58130276-58130295 None:intergenic 30.0%
ATACAAATTCTCAGGGAAAA+GGG - Chr8:58131160-58131179 MsG0880045361.01.T01:intron 30.0%
ATGGTTAAATCTCAACTTAG+TGG + Chr8:58128977-58128996 None:intergenic 30.0%
ATTCATTGGGAAGAAGATTA+AGG + Chr8:58131403-58131422 None:intergenic 30.0%
CAAGAAACCTGATATAGTAA+AGG + Chr8:58130755-58130774 None:intergenic 30.0%
CATTGAAAATGTAGTTAGTG+AGG - Chr8:58131199-58131218 MsG0880045361.01.T01:intron 30.0%
CATTGTCTTTATTCTGTGTT+GGG - Chr8:58129107-58129126 MsG0880045361.01.T01:CDS 30.0%
GATTGTGAAGATGAAATTGA+AGG + Chr8:58127666-58127685 None:intergenic 30.0%
GATTTGAAAAGTTGAAGGTT+TGG + Chr8:58130198-58130217 None:intergenic 30.0%
GCATTATAACAAATAGTAGC+AGG - Chr8:58132638-58132657 MsG0880045361.01.T01:intron 30.0%
GGAGAAGAAAAAAAGTGAAA+AGG + Chr8:58128064-58128083 None:intergenic 30.0%
GTTGAGAGAAAAAGATTACT+TGG - Chr8:58129904-58129923 MsG0880045361.01.T01:intron 30.0%
TAAAAAGATTTAGAGGTCAG+TGG + Chr8:58128842-58128861 None:intergenic 30.0%
TAGTGATGTAAAAAGATAGC+GGG - Chr8:58129562-58129581 MsG0880045361.01.T01:intron 30.0%
TATATAGTGTAAAAGAACCC+TGG + Chr8:58132003-58132022 None:intergenic 30.0%
TATCTATCGTAGAATCAGTT+AGG + Chr8:58133217-58133236 None:intergenic 30.0%
TATTTAAATCATGTGGCTTG+TGG - Chr8:58129328-58129347 MsG0880045361.01.T01:intron 30.0%
TCCTTAATGCAAAGCTTAAA+GGG + Chr8:58133629-58133648 None:intergenic 30.0%
TCTGTCTTGTATATATGTGT+TGG - Chr8:58130480-58130499 MsG0880045361.01.T01:intron 30.0%
TCTTGCAATATGTTATTGAG+GGG - Chr8:58133031-58133050 MsG0880045361.01.T01:intron 30.0%
TCTTTCTTTATCCTATTTCC+AGG - Chr8:58129846-58129865 MsG0880045361.01.T01:intron 30.0%
TGAAAGGAGAAAGTGATTAT+GGG - Chr8:58131666-58131685 MsG0880045361.01.T01:intron 30.0%
TTCAACCATACCTCTAAATT+AGG + Chr8:58130642-58130661 None:intergenic 30.0%
TTCCTTAATGCAAAGCTTAA+AGG + Chr8:58133630-58133649 None:intergenic 30.0%
TTGAAATTGACCTTTACTGA+TGG + Chr8:58131875-58131894 None:intergenic 30.0%
! AAAGAGACTAAACATTGACT+GGG - Chr8:58132299-58132318 MsG0880045361.01.T01:intron 30.0%
! AATAGGTTTTTACATGAGTG+AGG + Chr8:58131266-58131285 None:intergenic 30.0%
! AATTTGGCCTTTACTATATC+AGG - Chr8:58130745-58130764 MsG0880045361.01.T01:intron 30.0%
! ATTCTCCAAATCTATTTTCC+AGG - Chr8:58130136-58130155 MsG0880045361.01.T01:intron 30.0%
! CTCACTAACTACATTTTCAA+TGG + Chr8:58131201-58131220 None:intergenic 30.0%
! CTTTTACTTTGATTCCTCTT+TGG - Chr8:58133328-58133347 MsG0880045361.01.T01:intron 30.0%
! GTATAATTCGAAGGTGTAAT+TGG - Chr8:58129695-58129714 MsG0880045361.01.T01:intron 30.0%
! GTTTTGTCTATGGTTTTTCT+TGG - Chr8:58128865-58128884 MsG0880045361.01.T01:intron 30.0%
! TAAATGACTTGGCATTTACT+AGG - Chr8:58130548-58130567 MsG0880045361.01.T01:intron 30.0%
! TGATTTCAGCAACATTTTCA+AGG + Chr8:58127911-58127930 None:intergenic 30.0%
! TGGAATGTAAGTTTTGCAAA+AGG + Chr8:58129363-58129382 None:intergenic 30.0%
! TTAGAGGTATGGTTGAATTT+GGG - Chr8:58130645-58130664 MsG0880045361.01.T01:intron 30.0%
! TTCTCCAAATCTATTTTCCA+GGG - Chr8:58130137-58130156 MsG0880045361.01.T01:intron 30.0%
! TTTAGAGGTATGGTTGAATT+TGG - Chr8:58130644-58130663 MsG0880045361.01.T01:intron 30.0%
!! ACAATTAGTTCTGAACAAAG+TGG + Chr8:58132052-58132071 None:intergenic 30.0%
!! GAAATTGAAGGAAGTGTTAA+TGG + Chr8:58127654-58127673 None:intergenic 30.0%
!! TTTTCCAGGGTACATTTTTT+AGG - Chr8:58130150-58130169 MsG0880045361.01.T01:intron 30.0%
!!! AGGTTTCTTGTGTTGTTTTA+AGG - Chr8:58130765-58130784 MsG0880045361.01.T01:CDS 30.0%
!!! AGTTTTTGAATGGTTTTGAG+AGG - Chr8:58131691-58131710 MsG0880045361.01.T01:intron 30.0%
!!! GATTTTTTGGGCTTTTTCTT+TGG + Chr8:58132231-58132250 None:intergenic 30.0%
!!! GTTTTTGAATGGTTTTGAGA+GGG - Chr8:58131692-58131711 MsG0880045361.01.T01:intron 30.0%
!!! TCATTATGGTTAGTTTTACC+TGG + Chr8:58129867-58129886 None:intergenic 30.0%
!!! TTTCCAGGGTACATTTTTTA+GGG - Chr8:58130151-58130170 MsG0880045361.01.T01:intron 30.0%
!!! TTTCTTGTGTTGTTTTAAGG+AGG - Chr8:58130768-58130787 MsG0880045361.01.T01:CDS 30.0%
AAAAACAGGGACATGTTGTT+TGG - Chr8:58128028-58128047 MsG0880045361.01.T01:intron 35.0%
AAATAAGCTATACGAGCATG+AGG - Chr8:58128375-58128394 MsG0880045361.01.T01:intron 35.0%
AATAAATGACGTTAGAGGCT+TGG + Chr8:58129440-58129459 None:intergenic 35.0%
AATAATCTACAAGGCAGGTA+AGG + Chr8:58132394-58132413 None:intergenic 35.0%
ACACCAGACAAAATAGGATT+AGG + Chr8:58129046-58129065 None:intergenic 35.0%
ACCCTTTAAGCTTTGCATTA+AGG - Chr8:58133625-58133644 MsG0880045361.01.T01:CDS 35.0%
ACGTCATTTATTTCCTCTCT+TGG - Chr8:58129448-58129467 MsG0880045361.01.T01:intron 35.0%
AGATTTGGAGAATAAGCCAA+AGG + Chr8:58130129-58130148 None:intergenic 35.0%
AGGCTAGAGATTGAGAATAA+TGG + Chr8:58133274-58133293 None:intergenic 35.0%
AGGGAACGAATGAAAGAATT+CGG + Chr8:58127773-58127792 None:intergenic 35.0%
AGTAAAAGAAGACACGTTCA+CGG + Chr8:58133316-58133335 None:intergenic 35.0%
ATAGTAAAGGCCAAATTGTG+TGG + Chr8:58130742-58130761 None:intergenic 35.0%
ATCAAGATTTGAAAAGCTCC+AGG - Chr8:58129782-58129801 MsG0880045361.01.T01:intron 35.0%
ATCTTAAACCAGTCTCAGAA+GGG - Chr8:58132874-58132893 MsG0880045361.01.T01:intron 35.0%
ATGTATCATGCCATCAGTAA+AGG - Chr8:58131862-58131881 MsG0880045361.01.T01:intron 35.0%
CAAAGAGACTAAACATTGAC+TGG - Chr8:58132298-58132317 MsG0880045361.01.T01:intron 35.0%
CAATCTTAGAGCTTGAACTT+AGG + Chr8:58133135-58133154 None:intergenic 35.0%
CAGTAGTAAATCTTTGTGCA+AGG + Chr8:58131493-58131512 None:intergenic 35.0%
CATACAAATTCTCAGGGAAA+AGG - Chr8:58131159-58131178 MsG0880045361.01.T01:intron 35.0%
CTTGCAATATGTTATTGAGG+GGG - Chr8:58133032-58133051 MsG0880045361.01.T01:intron 35.0%
GAGGAAATAAATGACGTTAG+AGG + Chr8:58129445-58129464 None:intergenic 35.0%
GATAATTCAGCCTATCCATT+AGG + Chr8:58132207-58132226 None:intergenic 35.0%
GCATTGTCTTTATTCTGTGT+TGG - Chr8:58129106-58129125 MsG0880045361.01.T01:CDS 35.0%
GGAATAAGTAGAGAAGTGAA+AGG - Chr8:58131650-58131669 MsG0880045361.01.T01:intron 35.0%
GGCAACTAGAGTAGATTAAA+TGG + Chr8:58128919-58128938 None:intergenic 35.0%
GGCTAGAGATTGAGAATAAT+GGG + Chr8:58133273-58133292 None:intergenic 35.0%
GGGAATTTATGGTATAGGAT+AGG + Chr8:58133253-58133272 None:intergenic 35.0%
GGTAGTCATACAAATTCTCA+GGG - Chr8:58131153-58131172 MsG0880045361.01.T01:intron 35.0%
GGTTAATTGTGTTCAGTAGA+TGG - Chr8:58130895-58130914 MsG0880045361.01.T01:intron 35.0%
GTGAAAGGAGAAAGTGATTA+TGG - Chr8:58131665-58131684 MsG0880045361.01.T01:intron 35.0%
TAAGACAGCCAATGTTGTAT+AGG + Chr8:58129155-58129174 None:intergenic 35.0%
TAGAAGTAAGACGAATGATG+TGG + Chr8:58129383-58129402 None:intergenic 35.0%
TATCTTAAACCAGTCTCAGA+AGG - Chr8:58132873-58132892 MsG0880045361.01.T01:intron 35.0%
TCAAAACAACAGAGATTTGC+TGG + Chr8:58129293-58129312 None:intergenic 35.0%
TCAGCTTTCCCTGTTATTAT+AGG - Chr8:58133690-58133709 MsG0880045361.01.T01:CDS 35.0%
TGTAAACCATCATCTTCAAG+CGG + Chr8:58129266-58129285 None:intergenic 35.0%
TGTACCCTGGAAAATAGATT+TGG + Chr8:58130144-58130163 None:intergenic 35.0%
TTAATCTACTCTAGTTGCCA+TGG - Chr8:58128920-58128939 MsG0880045361.01.T01:intron 35.0%
TTACCCTAAAAAATGTACCC+TGG + Chr8:58130157-58130176 None:intergenic 35.0%
TTCGTCTTACTTCTACTCAA+TGG - Chr8:58129388-58129407 MsG0880045361.01.T01:intron 35.0%
TTGAACCAAACACAATGAGT+TGG - Chr8:58130268-58130287 MsG0880045361.01.T01:intron 35.0%
TTGGTTCAAGCACACAAAAA+TGG + Chr8:58130257-58130276 None:intergenic 35.0%
! AAAACAGGGACATGTTGTTT+GGG - Chr8:58128029-58128048 MsG0880045361.01.T01:intron 35.0%
! AAGGAAGTTCTTTTTCTTGC+AGG - Chr8:58133644-58133663 MsG0880045361.01.T01:CDS 35.0%
! AGGAAGTTCTTTTTCTTGCA+GGG - Chr8:58133645-58133664 MsG0880045361.01.T01:CDS 35.0%
! CAAAACAACAGAGATTTGCT+GGG + Chr8:58129292-58129311 None:intergenic 35.0%
! CACTTTAGAAACGTGTAGAA+GGG + Chr8:58130414-58130433 None:intergenic 35.0%
! CTTTTTCTCTCAACATCTCT+GGG + Chr8:58129898-58129917 None:intergenic 35.0%
! GGAGCTTCTAAAGAAAAACA+GGG - Chr8:58128015-58128034 MsG0880045361.01.T01:intron 35.0%
! GGGCGTTTTATGTGATAAAA+AGG + Chr8:58129218-58129237 None:intergenic 35.0%
! TAACAATAGGATTTGCTTCC+AGG + Chr8:58129600-58129619 None:intergenic 35.0%
! TATCACTGGTAATGAATGGA+AGG + Chr8:58132081-58132100 None:intergenic 35.0%
! TCACTTTAGAAACGTGTAGA+AGG + Chr8:58130415-58130434 None:intergenic 35.0%
! TCTTGTTTGGGATGAACATT+TGG - Chr8:58130084-58130103 MsG0880045361.01.T01:intron 35.0%
! TCTTTTTCTCTCAACATCTC+TGG + Chr8:58129899-58129918 None:intergenic 35.0%
! TGAAAATGAAGATGCTGACT+TGG - Chr8:58127797-58127816 MsG0880045361.01.T01:intron 35.0%
! TGGAGCTTCTAAAGAAAAAC+AGG - Chr8:58128014-58128033 MsG0880045361.01.T01:intron 35.0%
! TGGAGCTTTTCAAATCTTGA+TGG + Chr8:58129783-58129802 None:intergenic 35.0%
! TTTTATCACATAAAACGCCC+AGG - Chr8:58129218-58129237 MsG0880045361.01.T01:intron 35.0%
!! AAAGGTATTGCTCAAGCTAA+AGG + Chr8:58129200-58129219 None:intergenic 35.0%
!! AACATTTTCAAGGTCTTGAG+GGG + Chr8:58127901-58127920 None:intergenic 35.0%
!! AAGGTATTGCTCAAGCTAAA+GGG + Chr8:58129199-58129218 None:intergenic 35.0%
!! AGAAAATGGACTAGCTAATG+TGG + Chr8:58133502-58133521 None:intergenic 35.0%
!! CAACATTTTCAAGGTCTTGA+GGG + Chr8:58127902-58127921 None:intergenic 35.0%
!! GAAAATGAAGATGCTGACTT+GGG - Chr8:58127798-58127817 MsG0880045361.01.T01:intron 35.0%
!! GCTATACGTACTTTTTGTTG+AGG + Chr8:58129504-58129523 None:intergenic 35.0%
!! GTACTTTTTGTTGAGGAATG+AGG + Chr8:58129497-58129516 None:intergenic 35.0%
!! TATGCGAAATTAGCTCTGTT+TGG - Chr8:58128105-58128124 MsG0880045361.01.T01:intron 35.0%
!!! GGTTAGTTTTACCTGGAAAT+AGG + Chr8:58129860-58129879 None:intergenic 35.0%
!!! TTTTTTAGGGTACAGACCTT+TGG - Chr8:58130110-58130129 MsG0880045361.01.T01:intron 35.0%
AAGAGATGCACAGTAAAACC+TGG + Chr8:58129803-58129822 None:intergenic 40.0%
AAGCTCCAAAACCTGCAAAA+GGG + Chr8:58128002-58128021 None:intergenic 40.0%
ACAGCCAATGTTGTATAGGA+TGG + Chr8:58129151-58129170 None:intergenic 40.0%
ACCTCTCGAATTTCTTGGAT+GGG - Chr8:58131748-58131767 MsG0880045361.01.T01:intron 40.0%
AGACCAAGCTCTCTAATTCT+TGG - Chr8:58131717-58131736 MsG0880045361.01.T01:intron 40.0%
AGCCAATGTTGTATAGGATG+GGG + Chr8:58129149-58129168 None:intergenic 40.0%
AGGAAATGACGGTTACCAAA+CGG - Chr8:58128395-58128414 MsG0880045361.01.T01:intron 40.0%
ATACGAGCATGAGGAAATGA+CGG - Chr8:58128384-58128403 MsG0880045361.01.T01:intron 40.0%
ATGTCTTGAACATGTGAGTG+AGG - Chr8:58130698-58130717 MsG0880045361.01.T01:intron 40.0%
CAAGCTCTCTAATTCTTGGA+GGG - Chr8:58131721-58131740 MsG0880045361.01.T01:intron 40.0%
CAATCGAGATTTATCCCACT+AGG - Chr8:58128746-58128765 MsG0880045361.01.T01:intron 40.0%
CAGCCAATGTTGTATAGGAT+GGG + Chr8:58129150-58129169 None:intergenic 40.0%
CAGTGGTTTGACTATAGACA+TGG + Chr8:58128825-58128844 None:intergenic 40.0%
CATGGCCTAATTTAGAGGTA+TGG - Chr8:58130634-58130653 MsG0880045361.01.T01:intron 40.0%
CTGCACAACAATAATCATGG+TGG + Chr8:58132443-58132462 None:intergenic 40.0%
CTTCTTCCAAAGCAGTAACT+AGG + Chr8:58129963-58129982 None:intergenic 40.0%
CTTGAGAGATTCAAGATCGA+AGG - Chr8:58128505-58128524 MsG0880045361.01.T01:intron 40.0%
GAATGAGCTTGTGATAAGCT+AGG - Chr8:58128165-58128184 MsG0880045361.01.T01:intron 40.0%
GAATGAGGGGAAAATTCCAA+AGG - Chr8:58130572-58130591 MsG0880045361.01.T01:intron 40.0%
GAGATGAATTTAGGCCAAAG+AGG + Chr8:58133345-58133364 None:intergenic 40.0%
GAGGTGACTTATAGATTCCA+TGG + Chr8:58128940-58128959 None:intergenic 40.0%
GCATTTACTAGGTGAATGAG+GGG - Chr8:58130559-58130578 MsG0880045361.01.T01:intron 40.0%
GGCATTTACTAGGTGAATGA+GGG - Chr8:58130558-58130577 MsG0880045361.01.T01:intron 40.0%
GGGTAGTCATACAAATTCTC+AGG - Chr8:58131152-58131171 MsG0880045361.01.T01:intron 40.0%
GGTCTGCACAACAATAATCA+TGG + Chr8:58132446-58132465 None:intergenic 40.0%
GTAAACCATCATCTTCAAGC+GGG + Chr8:58129265-58129284 None:intergenic 40.0%
GTCTTACTTCTACTCAATGG+AGG - Chr8:58129391-58129410 MsG0880045361.01.T01:intron 40.0%
GTGGAAACACCAGACAAAAT+AGG + Chr8:58129052-58129071 None:intergenic 40.0%
TAAACCATCATCTTCAAGCG+GGG + Chr8:58129264-58129283 None:intergenic 40.0%
TAACTAGGTCGTCTCTTGTT+GGG + Chr8:58129948-58129967 None:intergenic 40.0%
TACCTCTAAATTAGGCCATG+CGG + Chr8:58130634-58130653 None:intergenic 40.0%
TATGAAGCACAATGGTGTGA+AGG + Chr8:58132788-58132807 None:intergenic 40.0%
TATGCAAAAACCACTGACAC+TGG - Chr8:58132255-58132274 MsG0880045361.01.T01:intron 40.0%
TCACTCCCAGTTCTATTGTT+GGG - Chr8:58132924-58132943 MsG0880045361.01.T01:intron 40.0%
TCTCACTCTCTCTTTACCAA+CGG - Chr8:58127714-58127733 MsG0880045361.01.T01:CDS 40.0%
TGCAAGAATGGCTGCAAATA+AGG + Chr8:58133018-58133037 None:intergenic 40.0%
TGGCATTTACTAGGTGAATG+AGG - Chr8:58130557-58130576 MsG0880045361.01.T01:intron 40.0%
TTCACTCCCAGTTCTATTGT+TGG - Chr8:58132923-58132942 MsG0880045361.01.T01:intron 40.0%
TTTGACCAATTTGATTGCCG+TGG - Chr8:58131966-58131985 MsG0880045361.01.T01:intron 40.0%
! AAACAGGGACATGTTGTTTG+GGG - Chr8:58128030-58128049 MsG0880045361.01.T01:intron 40.0%
! AGCATCTTCATTTTCAGCAG+AGG + Chr8:58127793-58127812 None:intergenic 40.0%
! ATCATCAAGTTGCTGTGTAG+AGG + Chr8:58127829-58127848 None:intergenic 40.0%
! GAGAGCGTGATTCATTCATT+GGG + Chr8:58131416-58131435 None:intergenic 40.0%
! GCATCTTCATTTTCAGCAGA+GGG + Chr8:58127792-58127811 None:intergenic 40.0%
! GGTCCTAATCCTATTTTGTC+TGG - Chr8:58129040-58129059 MsG0880045361.01.T01:CDS 40.0%
! GTACTTTTGCAACCTGAAAG+TGG + Chr8:58130355-58130374 None:intergenic 40.0%
! GTTTTTACATGAGTGAGGTG+TGG + Chr8:58131261-58131280 None:intergenic 40.0%
! TCTGGGATCCTCAATCATTA+TGG + Chr8:58129881-58129900 None:intergenic 40.0%
! TGAGAGCGTGATTCATTCAT+TGG + Chr8:58131417-58131436 None:intergenic 40.0%
! TTCTTTTTCTTGCAGGGCTA+TGG - Chr8:58133651-58133670 MsG0880045361.01.T01:CDS 40.0%
!! ACCTTAGAAGTCGGTTTTCT+GGG - Chr8:58133096-58133115 MsG0880045361.01.T01:intron 40.0%
!! GAAGGAAGTGTTAATGGCAA+CGG + Chr8:58127648-58127667 None:intergenic 40.0%
!! GCAACATTTTCAAGGTCTTG+AGG + Chr8:58127903-58127922 None:intergenic 40.0%
AAAAGAAGACACGTTCACGG+TGG + Chr8:58133313-58133332 None:intergenic 45.0%
AAACAACCCTGGATGATGTC+AGG + Chr8:58133831-58133850 None:intergenic 45.0%
AAAGAAGACACGTTCACGGT+GGG + Chr8:58133312-58133331 None:intergenic 45.0%
AACTAGGTCGTCTCTTGTTG+GGG + Chr8:58129947-58129966 None:intergenic 45.0%
AAGGAACTGACCAATGCTGA+AGG + Chr8:58132375-58132394 None:intergenic 45.0%
ACAGTCCTCACCTTAGAAGT+CGG - Chr8:58133087-58133106 MsG0880045361.01.T01:intron 45.0%
ACTAGGTGGGGTCAACTATA+TGG - Chr8:58128763-58128782 MsG0880045361.01.T01:intron 45.0%
AGACGACCTAGTTACTGCTT+TGG - Chr8:58129954-58129973 MsG0880045361.01.T01:intron 45.0%
AGCTACGAGTCGTTTAGCAA+TGG - Chr8:58127602-58127621 MsG0880045361.01.T01:three_prime_UTR 45.0%
AGTATGTTGTGCCGAATGAG+TGG + Chr8:58129071-58129090 None:intergenic 45.0%
ATATAGTTGACCCCACCTAG+TGG + Chr8:58128764-58128783 None:intergenic 45.0%
ATGTTCACCTGACATCATCC+AGG - Chr8:58133821-58133840 MsG0880045361.01.T01:five_prime_UTR 45.0%
CACCCCATCCTATACAACAT+TGG - Chr8:58129144-58129163 MsG0880045361.01.T01:CDS 45.0%
CCAAGCTCTCTAATTCTTGG+AGG - Chr8:58131720-58131739 MsG0880045361.01.T01:intron 45.0%
CCTCCAAGAATTAGAGAGCT+TGG + Chr8:58131723-58131742 None:intergenic 45.0%
CGAGATTTATCCCACTAGGT+GGG - Chr8:58128750-58128769 MsG0880045361.01.T01:intron 45.0%
CTTGGTGAATTGTGTTCCGT+TGG + Chr8:58127733-58127752 None:intergenic 45.0%
GAAGCTCCAAAACCTGCAAA+AGG + Chr8:58128003-58128022 None:intergenic 45.0%
GACCTCTCGAATTTCTTGGA+TGG - Chr8:58131747-58131766 MsG0880045361.01.T01:intron 45.0%
GAGAGACCTCTCGAATTTCT+TGG - Chr8:58131743-58131762 MsG0880045361.01.T01:intron 45.0%
GAGATTTATCCCACTAGGTG+GGG - Chr8:58128751-58128770 MsG0880045361.01.T01:intron 45.0%
GCATATTCCAGTCCACTTTC+AGG - Chr8:58130340-58130359 MsG0880045361.01.T01:intron 45.0%
GGAGATACAAGAACAACGCA+AGG + Chr8:58131307-58131326 None:intergenic 45.0%
GTAACTAGGTCGTCTCTTGT+TGG + Chr8:58129949-58129968 None:intergenic 45.0%
GTCTGGTGTTTCCACTCATT+CGG - Chr8:58129057-58129076 MsG0880045361.01.T01:CDS 45.0%
TATAGTTGACCCCACCTAGT+GGG + Chr8:58128763-58128782 None:intergenic 45.0%
TCATTTCCTCAGCAAGCATC+TGG + Chr8:58130611-58130630 None:intergenic 45.0%
TCCAACACACTAGGTGATGT+GGG + Chr8:58133068-58133087 None:intergenic 45.0%
TCCCATCCAAGAAATTCGAG+AGG + Chr8:58131752-58131771 None:intergenic 45.0%
TCGAGATTTATCCCACTAGG+TGG - Chr8:58128749-58128768 MsG0880045361.01.T01:intron 45.0%
TCGGCACAACATACTCATCT+TGG - Chr8:58129076-58129095 MsG0880045361.01.T01:CDS 45.0%
TGAAAGAATTCGGCGATGAG+TGG + Chr8:58127763-58127782 None:intergenic 45.0%
TGAGAACAGCGAAAGGTTGA+AGG + Chr8:58127699-58127718 None:intergenic 45.0%
TGCATCGTGTCCACACAATT+TGG - Chr8:58130729-58130748 MsG0880045361.01.T01:intron 45.0%
TGGAGAACAGCTCTATCCTT+TGG + Chr8:58130591-58130610 None:intergenic 45.0%
TGTTCACCTGACATCATCCA+GGG - Chr8:58133822-58133841 MsG0880045361.01.T01:five_prime_UTR 45.0%
TGTTGTATAGGATGGGGTGT+TGG + Chr8:58129143-58129162 None:intergenic 45.0%
TTCCACCACGGCAATCAAAT+TGG + Chr8:58131974-58131993 None:intergenic 45.0%
TTTGCAACCTGAAAGTGGAC+TGG + Chr8:58130350-58130369 None:intergenic 45.0%
! AGCGGGCTTAAAATTGAACC+TGG - Chr8:58129579-58129598 MsG0880045361.01.T01:intron 45.0%
! CTTAGTGGTTTGCACATGTG+TGG + Chr8:58128962-58128981 None:intergenic 45.0%
! GTTGTATAGGATGGGGTGTT+GGG + Chr8:58129142-58129161 None:intergenic 45.0%
! GTTTTACAACTCCCTCCAGT+AGG - Chr8:58133734-58133753 MsG0880045361.01.T01:CDS 45.0%
! TGATGCCCTTTTGCAGGTTT+TGG - Chr8:58127994-58128013 MsG0880045361.01.T01:intron 45.0%
!! AACAGAAGTGCCTTCAGCAT+TGG - Chr8:58132362-58132381 MsG0880045361.01.T01:intron 45.0%
!! ATCTGTAACCCTTCTGAGAC+TGG + Chr8:58132885-58132904 None:intergenic 45.0%
!! CACCTTAGAAGTCGGTTTTC+TGG - Chr8:58133095-58133114 MsG0880045361.01.T01:intron 45.0%
!! CCTTAGAAGTCGGTTTTCTG+GGG - Chr8:58133097-58133116 MsG0880045361.01.T01:intron 45.0%
!! GAAAACCGACTTCTAAGGTG+AGG + Chr8:58133095-58133114 None:intergenic 45.0%
!! GCATTTTGATGCCCTTTTGC+AGG - Chr8:58127988-58128007 MsG0880045361.01.T01:intron 45.0%
!! GTGGGAAAAGTACTAGAGAC+AGG + Chr8:58133294-58133313 None:intergenic 45.0%
!! TTTTCAAGGTCTTGAGGGGT+TGG + Chr8:58127897-58127916 None:intergenic 45.0%
!! ATTTGAATAATAAAATTTAT+TGG + Chr8:58131356-58131375 None:intergenic 5.0%
ACACGTACATCCCCATACCT+AGG + Chr8:58132984-58133003 None:intergenic 50.0%
AGGCAGCCCAACAATAGAAC+TGG + Chr8:58132933-58132952 None:intergenic 50.0%
AGGTATGGGGATGTACGTGT+TGG - Chr8:58132984-58133003 MsG0880045361.01.T01:intron 50.0%
AGTCTCTTTGCAGCCACTTG+AGG + Chr8:58132288-58132307 None:intergenic 50.0%
AGTGCCATACCAGTTCCTAC+TGG + Chr8:58133752-58133771 None:intergenic 50.0%
CACTGGAATCGATCCTCAAG+TGG - Chr8:58132272-58132291 MsG0880045361.01.T01:intron 50.0%
CCATACCAGTTCCTACTGGA+GGG + Chr8:58133748-58133767 None:intergenic 50.0%
GACCAATTTGATTGCCGTGG+TGG - Chr8:58131969-58131988 MsG0880045361.01.T01:intron 50.0%
GACCGCATGGCCTAATTTAG+AGG - Chr8:58130629-58130648 MsG0880045361.01.T01:intron 50.0%
GAGAGAGTGAGAACAGCGAA+AGG + Chr8:58127706-58127725 None:intergenic 50.0%
GAGTCGTTTAGCAATGGCAG+TGG - Chr8:58127608-58127627 MsG0880045361.01.T01:three_prime_UTR 50.0%
GGCAGCCCAACAATAGAACT+GGG + Chr8:58132932-58132951 None:intergenic 50.0%
GTCCAACACACTAGGTGATG+TGG + Chr8:58133069-58133088 None:intergenic 50.0%
GTCCAAGATCCAGGCTCATT+GGG - Chr8:58132958-58132977 MsG0880045361.01.T01:intron 50.0%
TCCCACATCACCTAGTGTGT+TGG - Chr8:58133064-58133083 MsG0880045361.01.T01:intron 50.0%
TGACAGGGCTGAGAGTTCAT+CGG + Chr8:58132837-58132856 None:intergenic 50.0%
TGAGGACTGTCCAACACACT+AGG + Chr8:58133077-58133096 None:intergenic 50.0%
TTGCTGAGGAAATGACCGCA+TGG - Chr8:58130616-58130635 MsG0880045361.01.T01:intron 50.0%
! AGGATCGATTCCAGTGTCAG+TGG + Chr8:58132268-58132287 None:intergenic 50.0%
! AGTGGTTTGCACATGTGTGG+AGG + Chr8:58128959-58128978 None:intergenic 50.0%
! CCCCAGAAAACCGACTTCTA+AGG + Chr8:58133100-58133119 None:intergenic 50.0%
! GGGCTATGGAGCACTATACT+TGG - Chr8:58133665-58133684 MsG0880045361.01.T01:CDS 50.0%
! TGTTCTCCAGATGCTTGCTG+AGG - Chr8:58130602-58130621 MsG0880045361.01.T01:intron 50.0%
!! ATTGGTTGGTGAGCCAAGAG+AGG + Chr8:58129464-58129483 None:intergenic 50.0%
!!! GGTTTTCTGGGGTTTGAGCT+AGG - Chr8:58133108-58133127 MsG0880045361.01.T01:intron 50.0%
ACCATCATCTTCAAGCGGGG+TGG + Chr8:58129261-58129280 None:intergenic 55.0%
AGGCTCATTGGGCCTAGGTA+TGG - Chr8:58132969-58132988 MsG0880045361.01.T01:intron 55.0%
ATACCTAGGCCCAATGAGCC+TGG + Chr8:58132970-58132989 None:intergenic 55.0%
CAACTCCCTCCAGTAGGAAC+TGG - Chr8:58133740-58133759 MsG0880045361.01.T01:CDS 55.0%
CCCTCCAGTAGGAACTGGTA+TGG - Chr8:58133745-58133764 MsG0880045361.01.T01:CDS 55.0%
CCCTGGCTGTATTTCCACCA+CGG + Chr8:58131986-58132005 None:intergenic 55.0%
CGTCCAAGATCCAGGCTCAT+TGG - Chr8:58132957-58132976 MsG0880045361.01.T01:intron 55.0%
GACAGGGCTGAGAGTTCATC+GGG + Chr8:58132836-58132855 None:intergenic 55.0%
GCCATACCAGTTCCTACTGG+AGG + Chr8:58133749-58133768 None:intergenic 55.0%
GCTCATTGGGCCTAGGTATG+GGG - Chr8:58132971-58132990 MsG0880045361.01.T01:intron 55.0%
GGACTGGAATATGCTGCCCT+TGG + Chr8:58130334-58130353 None:intergenic 55.0%
GGCTCATTGGGCCTAGGTAT+GGG - Chr8:58132970-58132989 MsG0880045361.01.T01:intron 55.0%
! CAGGGACATGTTGTTTGGGG+AGG - Chr8:58128033-58128052 MsG0880045361.01.T01:intron 55.0%
! CCGTGGTGGAAATACAGCCA+GGG - Chr8:58131983-58132002 MsG0880045361.01.T01:intron 55.0%
! GCGATGAGTGGTGCTAAGCT+TGG + Chr8:58127751-58127770 None:intergenic 55.0%
!! GTATAGGATGGGGTGTTGGG+AGG + Chr8:58129139-58129158 None:intergenic 55.0%
AGGATTAGGACCGCTCGCAG+TGG + Chr8:58129032-58129051 None:intergenic 60.0%
CCAACTCTCTCCACTGCGAG+CGG - Chr8:58129019-58129038 MsG0880045361.01.T01:intron 60.0%
CGCTCGCAGTGGAGAGAGTT+GGG + Chr8:58129021-58129040 None:intergenic 60.0%
CTGAAGTGGAGGAGGGTCCT+GGG + Chr8:58129238-58129257 None:intergenic 60.0%
GATCCAGGCTCATTGGGCCT+AGG - Chr8:58132964-58132983 MsG0880045361.01.T01:intron 60.0%
GCCACCCCGCTTGAAGATGA+TGG - Chr8:58129257-58129276 MsG0880045361.01.T01:intron 60.0%
GCCTGCATCGTCCAAGATCC+AGG - Chr8:58132949-58132968 MsG0880045361.01.T01:intron 60.0%
GCCTGGATCTTGGACGATGC+AGG + Chr8:58132953-58132972 None:intergenic 60.0%
GCTCGCAGTGGAGAGAGTTG+GGG + Chr8:58129020-58129039 None:intergenic 60.0%
GGCCCAATGAGCCTGGATCT+TGG + Chr8:58132963-58132982 None:intergenic 60.0%
GGCTGAGAGTTCATCGGGAC+AGG + Chr8:58132831-58132850 None:intergenic 60.0%
TTCAAGCGGGGTGGCTGAAG+TGG + Chr8:58129252-58129271 None:intergenic 60.0%
! GCCGTGGTGGAAATACAGCC+AGG - Chr8:58131982-58132001 MsG0880045361.01.T01:intron 60.0%
AAGCGGGGTGGCTGAAGTGG+AGG + Chr8:58129249-58129268 None:intergenic 65.0%
CCGCTCGCAGTGGAGAGAGT+TGG + Chr8:58129022-58129041 None:intergenic 65.0%
GCTGAAGTGGAGGAGGGTCC+TGG + Chr8:58129239-58129258 None:intergenic 65.0%
GGGGTGGCTGAAGTGGAGGA+GGG + Chr8:58129245-58129264 None:intergenic 65.0%
CGGGGTGGCTGAAGTGGAGG+AGG + Chr8:58129246-58129265 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 58127554 58133859 58127554 ID=MsG0880045361.01;Name=MsG0880045361.01
Chr8 mRNA 58127554 58133859 58127554 ID=MsG0880045361.01.T01;Parent=MsG0880045361.01;Name=MsG0880045361.01.T01;_AED=0.44;_eAED=0.44;_QI=67|1|1|1|0.8|0.66|6|104|270
Chr8 exon 58127554 58127747 58127554 ID=MsG0880045361.01.T01:exon:1531;Parent=MsG0880045361.01.T01
Chr8 exon 58129030 58129197 58129030 ID=MsG0880045361.01.T01:exon:1530;Parent=MsG0880045361.01.T01
Chr8 exon 58130763 58130843 58130763 ID=MsG0880045361.01.T01:exon:1529;Parent=MsG0880045361.01.T01
Chr8 exon 58131432 58131545 58131432 ID=MsG0880045361.01.T01:exon:1528;Parent=MsG0880045361.01.T01
Chr8 exon 58133359 58133403 58133359 ID=MsG0880045361.01.T01:exon:1527;Parent=MsG0880045361.01.T01
Chr8 exon 58133478 58133859 58133478 ID=MsG0880045361.01.T01:exon:1526;Parent=MsG0880045361.01.T01
Chr8 five_prime_UTR 58133793 58133859 58133793 ID=MsG0880045361.01.T01:five_prime_utr;Parent=MsG0880045361.01.T01
Chr8 CDS 58133478 58133792 58133478 ID=MsG0880045361.01.T01:cds;Parent=MsG0880045361.01.T01
Chr8 CDS 58133359 58133403 58133359 ID=MsG0880045361.01.T01:cds;Parent=MsG0880045361.01.T01
Chr8 CDS 58131432 58131545 58131432 ID=MsG0880045361.01.T01:cds;Parent=MsG0880045361.01.T01
Chr8 CDS 58130763 58130843 58130763 ID=MsG0880045361.01.T01:cds;Parent=MsG0880045361.01.T01
Chr8 CDS 58129030 58129197 58129030 ID=MsG0880045361.01.T01:cds;Parent=MsG0880045361.01.T01
Chr8 CDS 58127658 58127747 58127658 ID=MsG0880045361.01.T01:cds;Parent=MsG0880045361.01.T01
Chr8 three_prime_UTR 58127554 58127657 58127554 ID=MsG0880045361.01.T01:three_prime_utr;Parent=MsG0880045361.01.T01
Gene Sequence

>MsG0880045361.01.T01

ATGGCAGTGGCATCATCATCACAACCGTTGCCATTAACACTTCCTTCAATTTCATCTTCACAATCACATTCTCTTCCTTCAACCTTTCGCTGTTCTCACTCTCTCTTTACCAACGGAACACAATTCACCAAGCTTAGCACCACTCATCGCCGAATTCTTTCATTCGTTCCCTCTGCTGAAAATGAAGATGCTGACTTGGGTGTTTCCTCTACACAGCAACTTGATGATGACGTTGATGATGATGATGTTGTTGTTGATGATGATGAAGAAGAACCAACCCCTCAAGACCTTGAAAATGTTGCTGAAATCAAAAGGGTTTTGGAGCTTCTAAAGAAAAACAGGGACATGTTGTTTGGGGAGGTAAAACTAACCATAATGATTGAGGATCCCAGAGATGTTGAGAGAAAAAGATTACTTGGTATTGAAGATCTTGATGCCCCAACAAGAGACGACCTAGTTACTGCTTTGGAAGAAGTGAATGAGGGGAAAATTCCAAAGGATAGAGCTGTTCTCCAGATGCTTGCTGAGGAAATGACCGCATGGCCTAATTTAGAGGCTGAATTATCACCAAAGAAAAAGCCCAAAAAATCTCTATATGCAAAAACCACTGACACTGGAATCGATCCTCAAGTGGCTGCAAAGAGACTAAACATTGACTGGGATTCTGCTGCTGAAATTGAAGATGCGAATACTGACGATGAAACAGAAGTGCCTTCAGCATTGGGCTATGGAGCACTATACTTGGTTTCAGCTTTCCCTGTTATTATAGGTATTTCTGTAGTTTTGATTTTGTTTTACAACTCCCTCCAGTAG

Protein sequence

>MsG0880045361.01.T01

MAVASSSQPLPLTLPSISSSQSHSLPSTFRCSHSLFTNGTQFTKLSTTHRRILSFVPSAENEDADLGVSSTQQLDDDVDDDDVVVDDDEEEPTPQDLENVAEIKRVLELLKKNRDMLFGEVKLTIMIEDPRDVERKRLLGIEDLDAPTRDDLVTALEEVNEGKIPKDRAVLQMLAEEMTAWPNLEAELSPKKKPKKSLYAKTTDTGIDPQVAAKRLNIDWDSAAEIEDANTDDETEVPSALGYGALYLVSAFPVIIGISVVLILFYNSLQ*