AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040315.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040315.01.T01 MTR_4g034770 76.753 271 24 6 248 492 1 258 1.77e-129 386
MsG0780040315.01.T01 MTR_4g050863 53.968 252 46 5 1 187 39 285 2.36e-61 204
MsG0780040315.01.T01 MTR_3g080300 93.333 45 3 0 248 292 1 45 1.65e-23 94.0
MsG0780040315.01.T01 MTR_4g071480 78.462 65 8 1 37 101 1 59 9.60e-23 96.3
MsG0780040315.01.T01 MTR_3g077610 90.909 44 4 0 1 44 39 82 3.93e-20 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040315.01.T01 ATCG00500 47.723 549 197 14 1 531 9 485 1.28e-143 423

Find 78 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCGATTTCACTACTATTT+TGG 0.110779 7:-75836622 None:intergenic
TCCTGTAGCAATTGGTATTA+TGG 0.163684 7:+75837198 MsG0780040315.01.T01:CDS
AGTTCATCTTCCGAACTATT+TGG 0.221678 7:-75836995 None:intergenic
TCAGTTTATGGGAGGTAGTA+TGG 0.241437 7:+75837225 MsG0780040315.01.T01:CDS
ATCATTGCTATCATCGAAAA+TGG 0.246021 7:-75836339 None:intergenic
CTAAAATGTAACTAGCCTTT+TGG 0.259078 7:-75836448 None:intergenic
CTAAAATGTAACTAGCCTTT+TGG 0.259078 7:-75836526 None:intergenic
GATATTATTCCAATTATATA+TGG 0.263222 7:-75836264 None:intergenic
TCAATTCAATGATGTTTAAC+AGG 0.263782 7:+75836000 None:intergenic
TCCATATCAGTTAAAATAGA+TGG 0.266329 7:-75836101 None:intergenic
ATAGTTATTCCATATATAAT+TGG 0.282228 7:+75836255 MsG0780040315.01.T01:CDS
ATCATTAATAGTTGTATTGA+AGG 0.345443 7:+75836284 MsG0780040315.01.T01:CDS
ACAGGCACAGGTCAAGTAAA+TGG 0.351335 7:+75837172 MsG0780040315.01.T01:intron
AGTAAATCAATAGACAGTTT+TGG 0.359068 7:+75836047 MsG0780040315.01.T01:CDS
GGTTATCTTTGTTCTGAAAT+CGG 0.360642 7:+75836305 MsG0780040315.01.T01:CDS
GTCTTCCGAATTAAATTCAA+TGG 0.370040 7:-75836870 None:intergenic
ATGATTATTTAGTAGATGTC+AGG 0.378156 7:+75836144 MsG0780040315.01.T01:CDS
TTCAGCCGATTGTGAACCTT+CGG 0.387469 7:-75837575 None:intergenic
GGATCCCATTGAATTTAATT+CGG 0.414293 7:+75836865 MsG0780040315.01.T01:CDS
ACCACGTAATTCTTTAAAAG+AGG 0.416658 7:+75837633 MsG0780040315.01.T01:CDS
ACAAATACAATGATAGTGAT+TGG 0.419651 7:+75836384 MsG0780040315.01.T01:CDS
TAGGAAATTCCGTATGTTCA+TGG 0.422353 7:-75836201 None:intergenic
GACGCTTACATAGCATTTGC+AGG 0.426660 7:+75837514 MsG0780040315.01.T01:CDS
TTAACAGGGGTTTAGAATAC+AGG 0.428315 7:+75836015 MsG0780040315.01.T01:CDS
GGTGGGGTAACAGCTAGTTT+TGG 0.429797 7:+75837460 MsG0780040315.01.T01:CDS
AATAAGAGGTAAACGTTGAT+TGG 0.439042 7:-75837293 None:intergenic
GTTGCCTGCGACAATTGTTA+TGG 0.448985 7:+75836698 MsG0780040315.01.T01:CDS
AAGTTTGAGCTTAATGCAAA+TGG 0.457879 7:+75837357 MsG0780040315.01.T01:CDS
CTTATTATAGTATGTGCGTC+TGG 0.462255 7:+75837310 MsG0780040315.01.T01:CDS
GACGCACATACTATAATAAG+AGG 0.462742 7:-75837307 None:intergenic
AATGGTATTCCTGTAGCAAT+TGG 0.466163 7:+75837190 MsG0780040315.01.T01:CDS
TCAGCCGATTGTGAACCTTC+GGG 0.472562 7:-75837574 None:intergenic
TCTTCCGAATTAAATTCAAT+GGG 0.472920 7:-75836869 None:intergenic
CAGTTTATGGGAGGTAGTAT+GGG 0.475011 7:+75837226 MsG0780040315.01.T01:CDS
TGAACTCTCTGAAAATAGTT+CGG 0.480083 7:+75837012 MsG0780040315.01.T01:CDS
TATTTAGTAGATGTCAGGGT+TGG 0.484894 7:+75836149 MsG0780040315.01.T01:CDS
TGATTCTTATCCAAATAGTT+CGG 0.490233 7:+75836985 MsG0780040315.01.T01:CDS
TCCAGGTACTTGGAATCCTA+TGG 0.498677 7:+75836823 MsG0780040315.01.T01:CDS
CGAACCTTCTGAAAATAGTT+CGG 0.500353 7:+75837039 MsG0780040315.01.T01:CDS
TAGTTCTTATCAAAATAGTT+CGG 0.502636 7:+75836943 MsG0780040315.01.T01:CDS
CAAATACAATGATAGTGATT+GGG 0.514193 7:+75836385 MsG0780040315.01.T01:CDS
GCAAATGCTATGTAAGCGTC+GGG 0.514913 7:-75837511 None:intergenic
AGGTAGTATGGGATCCGTAG+TGG 0.517873 7:+75837237 MsG0780040315.01.T01:CDS
TCCATAATACCAATTGCTAC+AGG 0.519930 7:-75837199 None:intergenic
AGTGAGTTATTGCATTTCCA+TGG 0.520097 7:+75837661 MsG0780040315.01.T01:CDS
CAATTCAATGATGTTTAACA+GGG 0.522823 7:+75836001 None:intergenic
TCCATAGGATTCCAAGTACC+TGG 0.523036 7:-75836824 None:intergenic
ATACTTACATCTCCTACTAC+TGG 0.533678 7:+75837439 MsG0780040315.01.T01:CDS
TGCAAATGCTATGTAAGCGT+CGG 0.545474 7:-75837512 None:intergenic
TAGTTATAGCCATGAACATA+CGG 0.548429 7:+75836192 MsG0780040315.01.T01:CDS
TAGTGGCAATGATAGTGATA+AGG 0.552635 7:+75836598 MsG0780040315.01.T01:CDS
TGATTATTTAGTAGATGTCA+GGG 0.554876 7:+75836145 MsG0780040315.01.T01:CDS
CTTACATCTCCTACTACTGG+TGG 0.557051 7:+75837442 MsG0780040315.01.T01:CDS
TGAGTTGGATAAGCTCCAAA+AGG 0.558260 7:+75836511 MsG0780040315.01.T01:CDS
GGAGCGCGTATGCAAGAAGA+AGG 0.559559 7:+75837334 MsG0780040315.01.T01:CDS
GGTAGTATGGGATCCGTAGT+GGG 0.563237 7:+75837238 MsG0780040315.01.T01:CDS
CCATATCAGTTAAAATAGAT+GGG 0.566449 7:-75836100 None:intergenic
GCTGTTACCCCACCAGTAGT+AGG 0.571715 7:-75837451 None:intergenic
GAGACCATGTCTTCATCCAT+AGG 0.580226 7:-75836839 None:intergenic
AGTGCCCGAAGGTTCACAAT+CGG 0.580940 7:+75837570 MsG0780040315.01.T01:CDS
TTGAATATCGAAGTGCCCGA+AGG 0.583326 7:+75837559 MsG0780040315.01.T01:CDS
TTACATCTCCTACTACTGGT+GGG 0.583379 7:+75837443 MsG0780040315.01.T01:CDS
TGATTATGATAAGCTCCAAA+AGG 0.584378 7:+75836433 MsG0780040315.01.T01:CDS
ACTGATAGTGGCAATGATAG+TGG 0.589543 7:+75836581 MsG0780040315.01.T01:CDS
GTTTCCATAACAATTGTCGC+AGG 0.592295 7:-75836702 None:intergenic
TACATCTCCTACTACTGGTG+GGG 0.594902 7:+75837444 MsG0780040315.01.T01:CDS
GAATCCTATGGATGAAGACA+TGG 0.596325 7:+75836835 MsG0780040315.01.T01:CDS
AGTGATTGGGACAATGATAG+TGG 0.597015 7:+75836398 MsG0780040315.01.T01:CDS
ATGAATATTTGTGAATACTG+TGG 0.597921 7:+75836752 MsG0780040315.01.T01:CDS
ACTGATAGTGACACTGATAG+TGG 0.619494 7:+75836569 MsG0780040315.01.T01:CDS
GTAGTAGGAGATGTAAGTAT+CGG 0.622435 7:-75837436 None:intergenic
GGATGAAGACATGGTCTCTG+TGG 0.626356 7:+75836844 MsG0780040315.01.T01:CDS
GAGTCAAAGGAAAGAAACCA+TGG 0.639113 7:-75837678 None:intergenic
AGGGGTTTAGAATACAGGTG+TGG 0.669511 7:+75836020 MsG0780040315.01.T01:CDS
ATTATAGTATGTGCGTCTGG+AGG 0.671233 7:+75837313 MsG0780040315.01.T01:CDS
AATTCAATGATGTTTAACAG+GGG 0.681118 7:+75836002 None:intergenic
TAGTATAATAACTATCACAA+AGG 0.691526 7:+75836649 MsG0780040315.01.T01:CDS
TAGTGGGTGAGAAAATCACT+CGG 0.716421 7:+75837254 MsG0780040315.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGTTATTCCATATATAAT+TGG + Chr7:75836255-75836274 MsG0780040315.01.T01:CDS 15.0%
!! GATATTATTCCAATTATATA+TGG - Chr7:75836267-75836286 None:intergenic 15.0%
!!! TGATAAAACTTTTTTAGTTA+GGG + Chr7:75836226-75836245 MsG0780040315.01.T01:CDS 15.0%
!! ATCATTAATAGTTGTATTGA+AGG + Chr7:75836284-75836303 MsG0780040315.01.T01:CDS 20.0%
!! TAGTATAATAACTATCACAA+AGG + Chr7:75836649-75836668 MsG0780040315.01.T01:CDS 20.0%
!! TAGTTCTTATCAAAATAGTT+CGG + Chr7:75836943-75836962 MsG0780040315.01.T01:CDS 20.0%
!!! ATTATGGATTTTCAGTTTAT+GGG + Chr7:75837214-75837233 MsG0780040315.01.T01:CDS 20.0%
!!! CTAAAAAAGTTTTATCAGAT+AGG - Chr7:75836223-75836242 None:intergenic 20.0%
!!! CTGATAAAACTTTTTTAGTT+AGG + Chr7:75836225-75836244 MsG0780040315.01.T01:CDS 20.0%
!!! TATTATGGATTTTCAGTTTA+TGG + Chr7:75837213-75837232 MsG0780040315.01.T01:CDS 20.0%
!!! TTTACACTGTTATTTTCAAT+AGG - Chr7:75836074-75836093 None:intergenic 20.0%
! ATGAATATTTGTGAATACTG+TGG + Chr7:75836752-75836771 MsG0780040315.01.T01:CDS 25.0%
! ATGATTATTTAGTAGATGTC+AGG + Chr7:75836144-75836163 MsG0780040315.01.T01:CDS 25.0%
! CCATATCAGTTAAAATAGAT+GGG - Chr7:75836103-75836122 None:intergenic 25.0%
! TCCATATCAGTTAAAATAGA+TGG - Chr7:75836104-75836123 None:intergenic 25.0%
! TCTTCCGAATTAAATTCAAT+GGG - Chr7:75836872-75836891 None:intergenic 25.0%
! TGATTATTTAGTAGATGTCA+GGG + Chr7:75836145-75836164 MsG0780040315.01.T01:CDS 25.0%
! TGATTCTTATCCAAATAGTT+CGG + Chr7:75836985-75837004 MsG0780040315.01.T01:CDS 25.0%
!! AAATGATTTTTCGCATTTGT+GGG + Chr7:75836676-75836695 MsG0780040315.01.T01:CDS 25.0%
!! ACAAATACAATGATAGTGAT+TGG + Chr7:75836384-75836403 MsG0780040315.01.T01:CDS 25.0%
!! AGTAAATCAATAGACAGTTT+TGG + Chr7:75836047-75836066 MsG0780040315.01.T01:CDS 25.0%
!! CAAATACAATGATAGTGATT+GGG + Chr7:75836385-75836404 MsG0780040315.01.T01:CDS 25.0%
!! GCTGAATTTTTATTCGAAAA+GGG + Chr7:75837592-75837611 MsG0780040315.01.T01:CDS 25.0%
!! TGATAATCATCATTTTCAGA+AGG - Chr7:75837100-75837119 None:intergenic 25.0%
!!! TATTTTTCAGTTTGAGTCAA+AGG - Chr7:75837694-75837713 None:intergenic 25.0%
AAGTTTGAGCTTAATGCAAA+TGG + Chr7:75837357-75837376 MsG0780040315.01.T01:CDS 30.0%
AATAAGAGGTAAACGTTGAT+TGG - Chr7:75837296-75837315 None:intergenic 30.0%
ATCATTGCTATCATCGAAAA+TGG - Chr7:75836342-75836361 None:intergenic 30.0%
GATTCTTATTAAGACAGAAC+CGG + Chr7:75837130-75837149 MsG0780040315.01.T01:intron 30.0%
GGATCCCATTGAATTTAATT+CGG + Chr7:75836865-75836884 MsG0780040315.01.T01:CDS 30.0%
GTCTTCCGAATTAAATTCAA+TGG - Chr7:75836873-75836892 None:intergenic 30.0%
TAGTTATAGCCATGAACATA+CGG + Chr7:75836192-75836211 MsG0780040315.01.T01:CDS 30.0%
TGATTATGATAAGCTCCAAA+AGG + Chr7:75836433-75836452 MsG0780040315.01.T01:CDS 30.0%
! ACCACGTAATTCTTTAAAAG+AGG + Chr7:75837633-75837652 MsG0780040315.01.T01:CDS 30.0%
! CAAATGATTTTTCGCATTTG+TGG + Chr7:75836675-75836694 MsG0780040315.01.T01:CDS 30.0%
! GAATCAAGACTATTTTCAGA+AGG - Chr7:75836899-75836918 None:intergenic 30.0%
! GGATAAGAATCATTTTCAGA+AGG - Chr7:75836977-75836996 None:intergenic 30.0%
! GGCTGAATTTTTATTCGAAA+AGG + Chr7:75837591-75837610 MsG0780040315.01.T01:CDS 30.0%
! TCTCGATTTCACTACTATTT+TGG - Chr7:75836625-75836644 None:intergenic 30.0%
! TGAACTCTCTGAAAATAGTT+CGG + Chr7:75837012-75837031 MsG0780040315.01.T01:CDS 30.0%
!! ACCTCTTTTAAAGAATTACG+TGG - Chr7:75837637-75837656 None:intergenic 30.0%
!! GGTTATCTTTGTTCTGAAAT+CGG + Chr7:75836305-75836324 MsG0780040315.01.T01:CDS 30.0%
!!! CCCATCTATTTTAACTGATA+TGG + Chr7:75836100-75836119 MsG0780040315.01.T01:CDS 30.0%
!!! CTAAAATGTAACTAGCCTTT+TGG - Chr7:75836451-75836470 None:intergenic 30.0%
AATGGTATTCCTGTAGCAAT+TGG + Chr7:75837190-75837209 MsG0780040315.01.T01:CDS 35.0%
AGTGAGTTATTGCATTTCCA+TGG + Chr7:75837661-75837680 MsG0780040315.01.T01:CDS 35.0%
AGTTCATCTTCCGAACTATT+TGG - Chr7:75836998-75837017 None:intergenic 35.0%
ATACTTACATCTCCTACTAC+TGG + Chr7:75837439-75837458 MsG0780040315.01.T01:CDS 35.0%
CTTATTATAGTATGTGCGTC+TGG + Chr7:75837310-75837329 MsG0780040315.01.T01:CDS 35.0%
GACGCACATACTATAATAAG+AGG - Chr7:75837310-75837329 None:intergenic 35.0%
GTAGTAGGAGATGTAAGTAT+CGG - Chr7:75837439-75837458 None:intergenic 35.0%
TAGGAAATTCCGTATGTTCA+TGG - Chr7:75836204-75836223 None:intergenic 35.0%
TATTTAGTAGATGTCAGGGT+TGG + Chr7:75836149-75836168 MsG0780040315.01.T01:CDS 35.0%
TCCATAATACCAATTGCTAC+AGG - Chr7:75837202-75837221 None:intergenic 35.0%
TCCTGTAGCAATTGGTATTA+TGG + Chr7:75837198-75837217 MsG0780040315.01.T01:CDS 35.0%
! ATGGATTTTCAGTTTATGGG+AGG + Chr7:75837217-75837236 MsG0780040315.01.T01:CDS 35.0%
! CGAACCTTCTGAAAATAGTT+CGG + Chr7:75837039-75837058 MsG0780040315.01.T01:CDS 35.0%
! TAGTGATGATGATGATGAGT+TGG + Chr7:75836496-75836515 MsG0780040315.01.T01:CDS 35.0%
! TAGTGGCAATGATAGTGATA+AGG + Chr7:75836598-75836617 MsG0780040315.01.T01:CDS 35.0%
! TCTTCCGAACTATTTTCAGA+AGG - Chr7:75837019-75837038 None:intergenic 35.0%
! TGAACTCTCTGAAAATAGTC+CGG + Chr7:75837066-75837085 MsG0780040315.01.T01:intron 35.0%
! TTAACAGGGGTTTAGAATAC+AGG + Chr7:75836015-75836034 MsG0780040315.01.T01:CDS 35.0%
!! ATCGAACTTTTGATTGATCC+AGG + Chr7:75836806-75836825 MsG0780040315.01.T01:CDS 35.0%
!! TCAGTGTCACTATCATTTTC+CGG - Chr7:75836476-75836495 None:intergenic 35.0%
!! TTTTGATTGATCCAGGTACT+TGG + Chr7:75836813-75836832 MsG0780040315.01.T01:CDS 35.0%
!!! AACAGCTAGTTTTGGAATGT+TGG + Chr7:75837468-75837487 MsG0780040315.01.T01:CDS 35.0%
!!! ACAGCTAGTTTTGGAATGTT+GGG + Chr7:75837469-75837488 MsG0780040315.01.T01:CDS 35.0%
!!! GGCTAGTTACATTTTAGAAC+CGG + Chr7:75836454-75836473 MsG0780040315.01.T01:CDS 35.0%
AGTGATTGGGACAATGATAG+TGG + Chr7:75836398-75836417 MsG0780040315.01.T01:CDS 40.0%
ATTATAGTATGTGCGTCTGG+AGG + Chr7:75837313-75837332 MsG0780040315.01.T01:CDS 40.0%
CAGTTTATGGGAGGTAGTAT+GGG + Chr7:75837226-75837245 MsG0780040315.01.T01:CDS 40.0%
GAATCCTATGGATGAAGACA+TGG + Chr7:75836835-75836854 MsG0780040315.01.T01:CDS 40.0%
GAGTCAAAGGAAAGAAACCA+TGG - Chr7:75837681-75837700 None:intergenic 40.0%
GTTTCCATAACAATTGTCGC+AGG - Chr7:75836705-75836724 None:intergenic 40.0%
TCAGTTTATGGGAGGTAGTA+TGG + Chr7:75837225-75837244 MsG0780040315.01.T01:CDS 40.0%
TGCAAATGCTATGTAAGCGT+CGG - Chr7:75837515-75837534 None:intergenic 40.0%
TTAAGACAGAACCGGATTAC+TGG + Chr7:75837138-75837157 MsG0780040315.01.T01:intron 40.0%
TTACATCTCCTACTACTGGT+GGG + Chr7:75837443-75837462 MsG0780040315.01.T01:CDS 40.0%
! ACTGATAGTGACACTGATAG+TGG + Chr7:75836569-75836588 MsG0780040315.01.T01:CDS 40.0%
! AGTGATTTTCTCACCCACTA+CGG - Chr7:75837254-75837273 None:intergenic 40.0%
! TAGTGGGTGAGAAAATCACT+CGG + Chr7:75837254-75837273 MsG0780040315.01.T01:CDS 40.0%
! TGAGTTGGATAAGCTCCAAA+AGG + Chr7:75836511-75836530 MsG0780040315.01.T01:CDS 40.0%
! TTTTCAGAAGGTTCGTCTTC+CGG - Chr7:75836887-75836906 None:intergenic 40.0%
!! ACTGATAGTGGCAATGATAG+TGG + Chr7:75836581-75836600 MsG0780040315.01.T01:CDS 40.0%
!!! AGCTAGTTTTGGAATGTTGG+GGG + Chr7:75837471-75837490 MsG0780040315.01.T01:CDS 40.0%
!!! CAGCTAGTTTTGGAATGTTG+GGG + Chr7:75837470-75837489 MsG0780040315.01.T01:CDS 40.0%
ACAGGCACAGGTCAAGTAAA+TGG + Chr7:75837172-75837191 MsG0780040315.01.T01:intron 45.0%
CTTACATCTCCTACTACTGG+TGG + Chr7:75837442-75837461 MsG0780040315.01.T01:CDS 45.0%
GACGCTTACATAGCATTTGC+AGG + Chr7:75837514-75837533 MsG0780040315.01.T01:CDS 45.0%
GAGACCATGTCTTCATCCAT+AGG - Chr7:75836842-75836861 None:intergenic 45.0%
GCAAATGCTATGTAAGCGTC+GGG - Chr7:75837514-75837533 None:intergenic 45.0%
GTTGCCTGCGACAATTGTTA+TGG + Chr7:75836698-75836717 MsG0780040315.01.T01:CDS 45.0%
TACATCTCCTACTACTGGTG+GGG + Chr7:75837444-75837463 MsG0780040315.01.T01:CDS 45.0%
TCCAGGTACTTGGAATCCTA+TGG + Chr7:75836823-75836842 MsG0780040315.01.T01:CDS 45.0%
TCCATAGGATTCCAAGTACC+TGG - Chr7:75836827-75836846 None:intergenic 45.0%
TTCAGCCGATTGTGAACCTT+CGG - Chr7:75837578-75837597 None:intergenic 45.0%
! AGGGGTTTAGAATACAGGTG+TGG + Chr7:75836020-75836039 MsG0780040315.01.T01:CDS 45.0%
! TTGAATATCGAAGTGCCCGA+AGG + Chr7:75837559-75837578 MsG0780040315.01.T01:CDS 45.0%
AGACAGAACCGGATTACTGG+AGG + Chr7:75837141-75837160 MsG0780040315.01.T01:intron 50.0%
AGGTAGTATGGGATCCGTAG+TGG + Chr7:75837237-75837256 MsG0780040315.01.T01:CDS 50.0%
AGTGCCCGAAGGTTCACAAT+CGG + Chr7:75837570-75837589 MsG0780040315.01.T01:CDS 50.0%
GGATGAAGACATGGTCTCTG+TGG + Chr7:75836844-75836863 MsG0780040315.01.T01:CDS 50.0%
GGTAGTATGGGATCCGTAGT+GGG + Chr7:75837238-75837257 MsG0780040315.01.T01:CDS 50.0%
TCAGCCGATTGTGAACCTTC+GGG - Chr7:75837577-75837596 None:intergenic 50.0%
TTACTGGAGGCGGTTCAAAC+AGG + Chr7:75837154-75837173 MsG0780040315.01.T01:intron 50.0%
TTGAACCGCCTCCAGTAATC+CGG - Chr7:75837152-75837171 None:intergenic 50.0%
!! GGTGGGGTAACAGCTAGTTT+TGG + Chr7:75837460-75837479 MsG0780040315.01.T01:CDS 50.0%
CAGAACCGGATTACTGGAGG+CGG + Chr7:75837144-75837163 MsG0780040315.01.T01:intron 55.0%
GCTGTTACCCCACCAGTAGT+AGG - Chr7:75837454-75837473 None:intergenic 55.0%
GGAGCGCGTATGCAAGAAGA+AGG + Chr7:75837334-75837353 MsG0780040315.01.T01:CDS 55.0%
GAGGCGGTTCAAACAGGCAC+AGG + Chr7:75837160-75837179 MsG0780040315.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 75836011 75837714 75836011 ID=MsG0780040315.01;Name=MsG0780040315.01
Chr7 mRNA 75836011 75837714 75836011 ID=MsG0780040315.01.T01;Parent=MsG0780040315.01;Name=MsG0780040315.01.T01;_AED=0.29;_eAED=0.30;_QI=0|0|0|1|1|1|2|0|536
Chr7 exon 75836011 75837082 75836011 ID=MsG0780040315.01.T01:exon:14869;Parent=MsG0780040315.01.T01
Chr7 exon 75837176 75837714 75837176 ID=MsG0780040315.01.T01:exon:14870;Parent=MsG0780040315.01.T01
Chr7 CDS 75836011 75837082 75836011 ID=MsG0780040315.01.T01:cds;Parent=MsG0780040315.01.T01
Chr7 CDS 75837176 75837714 75837176 ID=MsG0780040315.01.T01:cds;Parent=MsG0780040315.01.T01
Gene Sequence

>MsG0780040315.01.T01

ATGTTTAACAGGGGTTTAGAATACAGGTGTGGTTTAAGTAAATCAATAGACAGTTTTGGTCCTATTGAAAATAACAGTGTAAACGAAGACCCATCTATTTTAACTGATATGGATAATACTATTCATAGTGATTATGATTATTTAGTAGATGTCAGGGTTGGAAAAACAATAGTGAGAATTCTAGTTATAGCCATGAACATACGGAATTTCCTATCTGATAAAACTTTTTTAGTTAGGGATAGTAATAGTTATTCCATATATAATTGGAATAATATCATTAATAGTTGTATTGAAGGTTATCTTTGTTCTGAAATCGGTATTGATAATTCCATTTTCGATGATAGCAATGATAGTGACAGTGACAATGACAGTGACAAATACAATGATAGTGATTGGGACAATGATAGTGGCAATGATAGTGATGATTATGATAAGCTCCAAAAGGCTAGTTACATTTTAGAACCGGAAAATGATAGTGACACTGATAGTGATGATGATGATGAGTTGGATAAGCTCCAAAAGGCTAGTTACATTTTAGAACCGGAAAATGATAGTGACACTGATAGTGACACTGATAGTGGCAATGATAGTGGCAATGATAGTGATAAGGTCCAAAATAGTAGTGAAATCGAGAGTACTAGTATAATAACTATCACAAAGGATACAAATGATTTTTCGCATTTGTGGGTTGCCTGCGACAATTGTTATGGAAACAATTATAAGAGATTTTTTAAATCGAAAATGAATATTTGTGAATACTGTGGATGTCATTTGAAAATGAGCAGTTCAGATCGAATCGAACTTTTGATTGATCCAGGTACTTGGAATCCTATGGATGAAGACATGGTCTCTGTGGATCCCATTGAATTTAATTCGGAAGACGAACCTTCTGAAAATAGTCTTGATTCTTCTGAAAATGATTCTTATCAAAATAGTTCTTATCAAAATAGTTCGGAAGACGAACCTTCTGAAAATGATTCTTATCCAAATAGTTCGGAAGATGAACTCTCTGAAAATAGTTCGGAAGACGAACCTTCTGAAAATAGTTCGGAAGATGAACTCTCTGAAAATAGCACAGGTCAAGTAAATGGTATTCCTGTAGCAATTGGTATTATGGATTTTCAGTTTATGGGAGGTAGTATGGGATCCGTAGTGGGTGAGAAAATCACTCGGTTGATCGAATATGCTACCAATCAACGTTTACCTCTTATTATAGTATGTGCGTCTGGAGGAGCGCGTATGCAAGAAGAAGGAAGTTTGAGCTTAATGCAAATGGCTAAAATTTCTTCTGCTTTATATAATTATCAAATCAATCAAAAATTATTCTATGTACCGATACTTACATCTCCTACTACTGGTGGGGTAACAGCTAGTTTTGGAATGTTGGGGGATATCATTATTGCTGAACCCGACGCTTACATAGCATTTGCAGGTAAAAGAGTAATTGAACAAACGTTGAATATCGAAGTGCCCGAAGGTTCACAATCGGCTGAATTTTTATTCGAAAAGGGCTTATTTGATTCAATCGTACCACGTAATTCTTTAAAAGAGGTTTTAAGTGAGTTATTGCATTTCCATGGTTTCTTTCCTTTGACTCAAACTGAAAAATAA

Protein sequence

>MsG0780040315.01.T01

MFNRGLEYRCGLSKSIDSFGPIENNSVNEDPSILTDMDNTIHSDYDYLVDVRVGKTIVRILVIAMNIRNFLSDKTFLVRDSNSYSIYNWNNIINSCIEGYLCSEIGIDNSIFDDSNDSDSDNDSDKYNDSDWDNDSGNDSDDYDKLQKASYILEPENDSDTDSDDDDELDKLQKASYILEPENDSDTDSDTDSGNDSGNDSDKVQNSSEIESTSIITITKDTNDFSHLWVACDNCYGNNYKRFFKSKMNICEYCGCHLKMSSSDRIELLIDPGTWNPMDEDMVSVDPIEFNSEDEPSENSLDSSENDSYQNSSYQNSSEDEPSENDSYPNSSEDELSENSSEDEPSENSSEDELSENSTGQVNGIPVAIGIMDFQFMGGSMGSVVGEKITRLIEYATNQRLPLIIVCASGGARMQEEGSLSLMQMAKISSALYNYQINQKLFYVPILTSPTTGGVTASFGMLGDIIIAEPDAYIAFAGKRVIEQTLNIEVPEGSQSAEFLFEKGLFDSIVPRNSLKEVLSELLHFHGFFPLTQTEK*