Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025992.01.T01 | XP_003613486.1 | 84.862 | 218 | 7 | 2 | 1 | 218 | 1 | 192 | 1.33E-124 | 360 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025992.01.T01 | F4I3V6 | 58.333 | 108 | 27 | 1 | 100 | 207 | 97 | 186 | 2.41E-34 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025992.01.T01 | G7K712 | 84.862 | 218 | 7 | 2 | 1 | 218 | 1 | 192 | 6.35e-125 | 360 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047945.01 | MsG0580025992.01 | 0.826574 | 2.517577e-54 | 2.370086e-51 |
| MsG0080047955.01 | MsG0580025992.01 | 0.805953 | 1.040607e-49 | 5.578865e-47 |
| MsG0080048068.01 | MsG0580025992.01 | 0.805197 | 1.499800e-49 | 7.885687e-47 |
| MsG0080048528.01 | MsG0580025992.01 | 0.802262 | 6.097131e-49 | 2.973347e-46 |
| MsG0080048801.01 | MsG0580025992.01 | 0.833308 | 5.745035e-56 | 6.590719e-53 |
| MsG0080048845.01 | MsG0580025992.01 | 0.820996 | 5.105531e-53 | 4.103333e-50 |
| MsG0080048876.01 | MsG0580025992.01 | 0.817128 | 3.871880e-52 | 2.795798e-49 |
| MsG0080049004.01 | MsG0580025992.01 | 0.814441 | 1.538643e-51 | 1.032514e-48 |
| MsG0080049029.01 | MsG0580025992.01 | 0.810962 | 8.878966e-51 | 5.428080e-48 |
| MsG0080049040.01 | MsG0580025992.01 | 0.857258 | 1.845252e-62 | 4.526587e-59 |
| MsG0080049068.01 | MsG0580025992.01 | 0.829904 | 3.965117e-55 | 4.114094e-52 |
| MsG0080049072.01 | MsG0580025992.01 | 0.806190 | 9.278958e-50 | 5.004737e-47 |
| MsG0080049078.01 | MsG0580025992.01 | 0.808390 | 3.171614e-50 | 1.811219e-47 |
| MsG0080049129.01 | MsG0580025992.01 | 0.816511 | 5.325804e-52 | 3.781157e-49 |
| MsG0080049130.01 | MsG0580025992.01 | 0.829482 | 5.021319e-55 | 5.145715e-52 |
| MsG0180000638.01 | MsG0580025992.01 | 0.856860 | 2.417521e-62 | 5.850243e-59 |
| MsG0180000671.01 | MsG0580025992.01 | 0.820215 | 7.715520e-53 | 6.067271e-50 |
| MsG0180000677.01 | MsG0580025992.01 | 0.833470 | 5.235354e-56 | 6.034882e-53 |
| MsG0180000843.01 | MsG0580025992.01 | 0.809522 | 1.814983e-50 | 1.068009e-47 |
| MsG0180000878.01 | MsG0580025992.01 | 0.814266 | 1.681366e-51 | 1.122952e-48 |
| MsG0180001085.01 | MsG0580025992.01 | 0.803926 | 2.760255e-49 | 1.404718e-46 |
| MsG0180001270.01 | MsG0580025992.01 | 0.845093 | 5.035413e-59 | 8.299360e-56 |
| MsG0180001371.01 | MsG0580025992.01 | 0.836478 | 9.142152e-57 | 1.153484e-53 |
| MsG0180001772.01 | MsG0580025992.01 | 0.848375 | 6.380585e-60 | 1.168523e-56 |
| MsG0180001880.01 | MsG0580025992.01 | 0.809532 | 1.805963e-50 | 1.063013e-47 |
| MsG0180002671.01 | MsG0580025992.01 | 0.823827 | 1.123342e-53 | 9.779805e-51 |
| MsG0180003453.01 | MsG0580025992.01 | 0.816377 | 5.705866e-52 | 4.036367e-49 |
| MsG0180003933.01 | MsG0580025992.01 | 0.812209 | 4.757598e-51 | 3.006406e-48 |
| MsG0180004448.01 | MsG0580025992.01 | 0.802256 | 6.116957e-49 | 2.982527e-46 |
| MsG0180004672.01 | MsG0580025992.01 | 0.841247 | 5.335300e-58 | 7.792153e-55 |
| MsG0180004733.01 | MsG0580025992.01 | 0.837020 | 6.649132e-57 | 8.527623e-54 |
| MsG0180004735.01 | MsG0580025992.01 | 0.815995 | 6.946391e-52 | 4.862815e-49 |
| MsG0180004739.01 | MsG0580025992.01 | 0.824728 | 6.898311e-54 | 6.162118e-51 |
| MsG0180004934.01 | MsG0580025992.01 | 0.805186 | 1.507468e-49 | 7.923744e-47 |
| MsG0180004987.01 | MsG0580025992.01 | 0.829992 | 3.773263e-55 | 3.924646e-52 |
| MsG0180005087.01 | MsG0580025992.01 | 0.810636 | 1.044742e-50 | 6.330746e-48 |
| MsG0180005184.01 | MsG0580025992.01 | 0.818939 | 1.508461e-52 | 1.145039e-49 |
| MsG0180005349.01 | MsG0580025992.01 | 0.810794 | 9.654789e-51 | 5.875442e-48 |
| MsG0180005492.01 | MsG0580025992.01 | 0.804575 | 2.022337e-49 | 1.046423e-46 |
| MsG0180005755.01 | MsG0580025992.01 | 0.820679 | 6.039453e-53 | 4.810416e-50 |
| MsG0180005803.01 | MsG0580025992.01 | 0.822139 | 2.779242e-53 | 2.306445e-50 |
| MsG0180005807.01 | MsG0580025992.01 | 0.802575 | 5.257048e-49 | 2.584101e-46 |
| MsG0180005961.01 | MsG0580025992.01 | 0.860127 | 2.564453e-63 | 6.936448e-60 |
| MsG0180005969.01 | MsG0580025992.01 | 0.803237 | 3.836173e-49 | 1.917814e-46 |
| MsG0180006042.01 | MsG0580025992.01 | 0.836393 | 9.607471e-57 | 1.209142e-53 |
| MsG0180006223.01 | MsG0580025992.01 | 0.812176 | 4.837496e-51 | 3.054087e-48 |
| MsG0280010926.01 | MsG0580025992.01 | 0.815524 | 8.845326e-52 | 6.112974e-49 |
| MsG0280011411.01 | MsG0580025992.01 | 0.824380 | 8.328836e-54 | 7.364910e-51 |
| MsG0380011495.01 | MsG0580025992.01 | 0.831918 | 1.271153e-55 | 1.399344e-52 |
| MsG0380011632.01 | MsG0580025992.01 | 0.823881 | 1.090660e-53 | 9.510026e-51 |
| MsG0380012801.01 | MsG0580025992.01 | 0.801168 | 1.022367e-48 | 4.849447e-46 |
| MsG0380012876.01 | MsG0580025992.01 | 0.808973 | 2.380099e-50 | 1.380141e-47 |
| MsG0380013111.01 | MsG0580025992.01 | 0.826087 | 3.288469e-54 | 3.053212e-51 |
| MsG0380013472.01 | MsG0580025992.01 | 0.828153 | 1.052869e-54 | 1.037915e-51 |
| MsG0380013530.01 | MsG0580025992.01 | 0.818842 | 1.587231e-52 | 1.201476e-49 |
| MsG0380013955.01 | MsG0580025992.01 | 0.801893 | 7.262514e-49 | 3.508653e-46 |
| MsG0380014053.01 | MsG0580025992.01 | 0.832819 | 7.603507e-56 | 8.595481e-53 |
| MsG0380014729.01 | MsG0580025992.01 | 0.809316 | 2.009661e-50 | 1.176097e-47 |
| MsG0480018485.01 | MsG0580025992.01 | 0.810943 | 8.964433e-51 | 5.477393e-48 |
| MsG0480018631.01 | MsG0580025992.01 | 0.834818 | 2.404770e-56 | 2.886360e-53 |
| MsG0480018905.01 | MsG0580025992.01 | 0.822923 | 1.826941e-53 | 1.550380e-50 |
| MsG0480019284.01 | MsG0580025992.01 | 0.800656 | 1.301035e-48 | 6.091670e-46 |
| MsG0480019592.01 | MsG0580025992.01 | 0.834991 | 2.176341e-56 | 2.625867e-53 |
| MsG0480019641.01 | MsG0580025992.01 | 0.800577 | 1.349990e-48 | 6.308182e-46 |
| MsG0480019751.01 | MsG0580025992.01 | 0.816299 | 5.941308e-52 | 4.194156e-49 |
| MsG0480019971.01 | MsG0580025992.01 | 0.844555 | 7.030939e-59 | 1.139334e-55 |
| MsG0480020350.01 | MsG0580025992.01 | 0.832890 | 7.299375e-56 | 8.269535e-53 |
| MsG0480020408.01 | MsG0580025992.01 | 0.805646 | 1.207521e-49 | 6.422653e-47 |
| MsG0480020690.01 | MsG0580025992.01 | 0.824715 | 6.945526e-54 | 6.202257e-51 |
| MsG0480020753.01 | MsG0580025992.01 | 0.803781 | 2.958549e-49 | 1.499916e-46 |
| MsG0480021168.01 | MsG0580025992.01 | 0.846272 | 2.410570e-59 | 4.126621e-56 |
| MsG0480021294.01 | MsG0580025992.01 | 0.828745 | 7.578436e-55 | 7.599446e-52 |
| MsG0480021303.01 | MsG0580025992.01 | 0.846129 | 2.635884e-59 | 4.491410e-56 |
| MsG0480021406.01 | MsG0580025992.01 | 0.810655 | 1.034845e-50 | 6.274176e-48 |
| MsG0480021521.01 | MsG0580025992.01 | 0.804454 | 2.143262e-49 | 1.105518e-46 |
| MsG0480021709.01 | MsG0580025992.01 | 0.818740 | 1.673937e-52 | 1.263489e-49 |
| MsG0480021777.01 | MsG0580025992.01 | 0.830549 | 2.758674e-55 | 2.915756e-52 |
| MsG0480021783.01 | MsG0580025992.01 | 0.833709 | 4.562716e-56 | 5.296982e-53 |
| MsG0480021817.01 | MsG0580025992.01 | 0.825191 | 5.362397e-54 | 4.853742e-51 |
| MsG0480022286.01 | MsG0580025992.01 | 0.809472 | 1.861017e-50 | 1.093613e-47 |
| MsG0480022417.01 | MsG0580025992.01 | 0.804153 | 2.476305e-49 | 1.267488e-46 |
| MsG0480022805.01 | MsG0580025992.01 | 0.815963 | 7.061064e-52 | 4.938774e-49 |
| MsG0480023098.01 | MsG0580025992.01 | 0.802172 | 6.363173e-49 | 3.095962e-46 |
| MsG0480023166.01 | MsG0580025992.01 | 0.838372 | 2.990403e-57 | 3.997244e-54 |
| MsG0480023216.01 | MsG0580025992.01 | 0.843007 | 1.825917e-58 | 2.817845e-55 |
| MsG0480023314.01 | MsG0580025992.01 | 0.810569 | 1.080027e-50 | 6.532840e-48 |
| MsG0480023351.01 | MsG0580025992.01 | 0.821562 | 3.779694e-53 | 3.085734e-50 |
| MsG0480023371.01 | MsG0580025992.01 | 0.804714 | 1.892281e-49 | 9.826447e-47 |
| MsG0480023389.01 | MsG0580025992.01 | 0.810623 | 1.051312e-50 | 6.368567e-48 |
| MsG0480023422.01 | MsG0580025992.01 | 0.818052 | 2.396931e-52 | 1.775125e-49 |
| MsG0480023505.01 | MsG0580025992.01 | 0.806202 | 9.222234e-50 | 4.975824e-47 |
| MsG0480023661.01 | MsG0580025992.01 | 0.804863 | 1.761208e-49 | 9.181694e-47 |
| MsG0480023845.01 | MsG0580025992.01 | 0.806767 | 7.010907e-50 | 3.837486e-47 |
| MsG0580024327.01 | MsG0580025992.01 | 0.801463 | 8.898439e-49 | 4.252193e-46 |
| MsG0580024385.01 | MsG0580025992.01 | 0.802593 | 5.211647e-49 | 2.563084e-46 |
| MsG0580024487.01 | MsG0580025992.01 | 0.813537 | 2.433952e-51 | 1.593811e-48 |
| MsG0580024679.01 | MsG0580025992.01 | 0.840576 | 8.000003e-58 | 1.144412e-54 |
| MsG0580024836.01 | MsG0580025992.01 | 0.826400 | 2.769566e-54 | 2.594605e-51 |
| MsG0580024873.01 | MsG0580025992.01 | 0.877336 | 6.819040e-69 | 3.416417e-65 |
| MsG0580024944.01 | MsG0580025992.01 | 0.854984 | 8.552793e-62 | 1.944988e-58 |
| MsG0580024982.01 | MsG0580025992.01 | 0.861990 | 6.955768e-64 | 2.005191e-60 |
| MsG0580025097.01 | MsG0580025992.01 | 0.801151 | 1.030999e-48 | 4.888280e-46 |
| MsG0580025377.01 | MsG0580025992.01 | 0.807627 | 4.609085e-50 | 2.579814e-47 |
| MsG0580025601.01 | MsG0580025992.01 | 0.818287 | 2.120717e-52 | 1.580797e-49 |
| MsG0580025845.01 | MsG0580025992.01 | 0.803257 | 3.799676e-49 | 1.900558e-46 |
| MsG0580025971.01 | MsG0580025992.01 | 0.815580 | 8.595400e-52 | 5.949226e-49 |
| MsG0580025992.01 | MsG0580025997.01 | 0.827764 | 1.306454e-54 | 1.273203e-51 |
| MsG0580025992.01 | MsG0580027394.01 | 0.803925 | 2.762417e-49 | 1.405765e-46 |
| MsG0580025992.01 | MsG0580027979.01 | 0.801889 | 7.275930e-49 | 3.514835e-46 |
| MsG0580025992.01 | MsG0580028024.01 | 0.855176 | 7.517610e-62 | 1.720350e-58 |
| MsG0580025992.01 | MsG0580028073.01 | 0.819975 | 8.757793e-53 | 6.841461e-50 |
| MsG0580025992.01 | MsG0580028111.01 | 0.829286 | 5.605284e-55 | 5.712389e-52 |
| MsG0580025992.01 | MsG0580028335.01 | 0.811299 | 7.504999e-51 | 4.628401e-48 |
| MsG0580025992.01 | MsG0580028853.01 | 0.813171 | 2.929377e-51 | 1.899043e-48 |
| MsG0580025992.01 | MsG0580028925.01 | 0.810491 | 1.122801e-50 | 6.777499e-48 |
| MsG0580025992.01 | MsG0580029605.01 | 0.847409 | 1.177641e-59 | 2.091221e-56 |
| MsG0580025992.01 | MsG0580029719.01 | 0.803026 | 4.242645e-49 | 2.109514e-46 |
| MsG0580025992.01 | MsG0580029753.01 | 0.809156 | 2.174666e-50 | 1.267278e-47 |
| MsG0580025992.01 | MsG0580029912.01 | 0.802646 | 5.083581e-49 | 2.503322e-46 |
| MsG0580025992.01 | MsG0580029967.01 | 0.829528 | 4.894243e-55 | 5.022152e-52 |
| MsG0580025992.01 | MsG0680030290.01 | 0.828900 | 6.951964e-55 | 7.002950e-52 |
| MsG0580025992.01 | MsG0680030627.01 | 0.809937 | 1.478383e-50 | 8.795304e-48 |
| MsG0580025992.01 | MsG0680030858.01 | 0.803368 | 3.604793e-49 | 1.808145e-46 |
| MsG0580025992.01 | MsG0680030957.01 | 0.822798 | 1.953940e-53 | 1.652243e-50 |
| MsG0580025992.01 | MsG0680031115.01 | 0.889627 | 2.043921e-73 | 1.662138e-69 |
| MsG0580025992.01 | MsG0680031689.01 | 0.802651 | 5.071373e-49 | 2.497625e-46 |
| MsG0580025992.01 | MsG0680032055.01 | 0.819712 | 1.005511e-52 | 7.797197e-50 |
| MsG0580025992.01 | MsG0680032057.01 | 0.876402 | 1.436298e-68 | 6.954416e-65 |
| MsG0580025992.01 | MsG0680032515.01 | 0.850784 | 1.357371e-60 | 2.689108e-57 |
| MsG0580025992.01 | MsG0680032520.01 | 0.824743 | 6.842345e-54 | 6.114792e-51 |
| MsG0580025992.01 | MsG0680033377.01 | 0.815268 | 1.008315e-51 | 6.919543e-49 |
| MsG0580025992.01 | MsG0680034064.01 | 0.833107 | 6.447688e-56 | 7.352952e-53 |
| MsG0580025992.01 | MsG0680034767.01 | 0.811647 | 6.305857e-51 | 3.924650e-48 |
| MsG0580025992.01 | MsG0680035731.01 | 0.824764 | 6.762900e-54 | 6.047444e-51 |
| MsG0580025992.01 | MsG0780036263.01 | 0.800066 | 1.715445e-48 | 7.912563e-46 |
| MsG0580025992.01 | MsG0780037184.01 | 0.852137 | 5.622028e-61 | 1.163544e-57 |
| MsG0580025992.01 | MsG0780037915.01 | 0.808847 | 2.532758e-50 | 1.463718e-47 |
| MsG0580025992.01 | MsG0780038571.01 | 0.853448 | 2.373360e-61 | 5.130058e-58 |
| MsG0580025992.01 | MsG0780038784.01 | 0.807934 | 3.965466e-50 | 2.237399e-47 |
| MsG0580025992.01 | MsG0780038986.01 | 0.830015 | 3.724980e-55 | 3.876833e-52 |
| MsG0580025992.01 | MsG0780039675.01 | 0.807213 | 5.640422e-50 | 3.123344e-47 |
| MsG0580025992.01 | MsG0780039707.01 | 0.865887 | 4.262458e-65 | 1.409000e-61 |
| MsG0580025992.01 | MsG0780039805.01 | 0.834015 | 3.826498e-56 | 4.483531e-53 |
| MsG0580025992.01 | MsG0780039859.01 | 0.802119 | 6.524939e-49 | 3.170314e-46 |
| MsG0580025992.01 | MsG0780040061.01 | 0.804374 | 2.227700e-49 | 1.146731e-46 |
| MsG0580025992.01 | MsG0780040284.01 | 0.831209 | 1.900583e-55 | 2.048396e-52 |
| MsG0580025992.01 | MsG0780040343.01 | 0.822755 | 1.998908e-53 | 1.688382e-50 |
| MsG0580025992.01 | MsG0780040825.01 | -0.803782 | 2.958267e-49 | 1.499781e-46 |
| MsG0580025992.01 | MsG0780041289.01 | 0.818535 | 1.863445e-52 | 1.398624e-49 |
| MsG0580025992.01 | MsG0780041706.01 | 0.806315 | 8.731655e-50 | 4.724415e-47 |
| MsG0580025992.01 | MsG0780041778.01 | 0.832791 | 7.727126e-56 | 8.727957e-53 |
| MsG0580025992.01 | MsG0880042290.01 | 0.813458 | 2.533723e-51 | 1.655640e-48 |
| MsG0580025992.01 | MsG0880042894.01 | 0.804935 | 1.700899e-49 | 8.883695e-47 |
| MsG0580025992.01 | MsG0880043075.01 | 0.861053 | 1.344077e-63 | 3.752496e-60 |
| MsG0580025992.01 | MsG0880043238.01 | 0.833400 | 5.450863e-56 | 6.270278e-53 |
| MsG0580025992.01 | MsG0880043250.01 | 0.812403 | 4.315623e-51 | 2.741518e-48 |
| MsG0580025992.01 | MsG0880044228.01 | 0.820374 | 7.095856e-53 | 5.604848e-50 |
| MsG0580025992.01 | MsG0880044312.01 | 0.800658 | 1.299698e-48 | 6.085722e-46 |
| MsG0580025992.01 | MsG0880044314.01 | 0.832923 | 7.166440e-56 | 8.126379e-53 |
| MsG0580025992.01 | MsG0880044392.01 | 0.801413 | 9.111365e-49 | 4.348446e-46 |
| MsG0580025992.01 | MsG0880044884.01 | 0.818645 | 1.759612e-52 | 1.324616e-49 |
| MsG0580025992.01 | MsG0880045361.01 | 0.833395 | 5.465500e-56 | 6.286179e-53 |
| MsG0580025992.01 | MsG0880045412.01 | 0.817423 | 3.323116e-52 | 2.419190e-49 |
| MsG0580025992.01 | MsG0880046324.01 | 0.824103 | 9.677834e-54 | 8.490482e-51 |
| MsG0580025992.01 | MsG0880046675.01 | 0.820889 | 5.403948e-53 | 4.329912e-50 |
| MsG0580025992.01 | MsG0880046764.01 | 0.841274 | 5.248318e-58 | 7.671660e-55 |
| MsG0580025992.01 | MsG0880046765.01 | 0.826957 | 2.039658e-54 | 1.941650e-51 |
| MsG0580025992.01 | MsG0880046791.01 | 0.840375 | 9.033238e-58 | 1.284219e-54 |
| MsG0580025992.01 | MsG0880046866.01 | 0.809472 | 1.860967e-50 | 1.093587e-47 |
| MsG0580025992.01 | MsG0880047156.01 | 0.804148 | 2.482290e-49 | 1.270392e-46 |
| MsG0580025992.01 | MsG0880047234.01 | 0.813151 | 2.959740e-51 | 1.917658e-48 |
| MsG0580025992.01 | MsG0880047451.01 | 0.869613 | 2.716304e-66 | 1.025722e-62 |
| MsG0580025992.01 | MsG0880047540.01 | 0.816167 | 6.357742e-52 | 4.471772e-49 |
| MsG0580025992.01 | MsG0880047567.01 | 0.818349 | 2.053793e-52 | 1.533644e-49 |
| MsG0580025992.01 | MsG0880047656.01 | 0.834754 | 2.496498e-56 | 2.990429e-53 |
| MsG0580025992.01 | MsG0880047719.01 | 0.801410 | 9.123282e-49 | 4.353806e-46 |
| MsG0380015077.01 | MsG0580025992.01 | 0.809286 | 2.039883e-50 | 1.192850e-47 |
| MsG0380015103.01 | MsG0580025992.01 | 0.812627 | 3.854973e-51 | 2.463288e-48 |
| MsG0380015496.01 | MsG0580025992.01 | 0.851664 | 7.660938e-61 | 1.561790e-57 |
| MsG0380015547.01 | MsG0580025992.01 | 0.803333 | 3.664551e-49 | 1.836525e-46 |
| MsG0380015603.01 | MsG0580025992.01 | 0.842859 | 1.998830e-58 | 3.070681e-55 |
| MsG0380015896.01 | MsG0580025992.01 | 0.810114 | 1.354142e-50 | 8.093614e-48 |
| MsG0380015900.01 | MsG0580025992.01 | 0.803665 | 3.128091e-49 | 1.581077e-46 |
| MsG0380016192.01 | MsG0580025992.01 | 0.804633 | 1.966826e-49 | 1.019191e-46 |
| MsG0380016194.01 | MsG0580025992.01 | 0.853736 | 1.962281e-61 | 4.282090e-58 |
| MsG0380016284.01 | MsG0580025992.01 | 0.843844 | 1.091449e-58 | 1.729653e-55 |
| MsG0380016452.01 | MsG0580025992.01 | 0.832885 | 7.321547e-56 | 8.293312e-53 |
| MsG0380016459.01 | MsG0580025992.01 | 0.816287 | 5.977317e-52 | 4.218310e-49 |
| MsG0380016542.01 | MsG0580025992.01 | 0.804634 | 1.965834e-49 | 1.018700e-46 |
| MsG0380016623.01 | MsG0580025992.01 | 0.834389 | 3.083388e-56 | 3.653784e-53 |
| MsG0380016751.01 | MsG0580025992.01 | 0.811820 | 5.781098e-51 | 3.614854e-48 |
| MsG0380016762.01 | MsG0580025992.01 | 0.828190 | 1.031798e-54 | 1.018207e-51 |
| MsG0380016836.01 | MsG0580025992.01 | 0.801979 | 6.971865e-49 | 3.375301e-46 |
| MsG0380017143.01 | MsG0580025992.01 | 0.831558 | 1.559784e-55 | 1.698781e-52 |
| MsG0380017651.01 | MsG0580025992.01 | 0.800934 | 1.141667e-48 | 5.383417e-46 |
| MsG0380017703.01 | MsG0580025992.01 | 0.831791 | 1.366483e-55 | 1.498674e-52 |
| MsG0380017727.01 | MsG0580025992.01 | 0.817608 | 3.019239e-52 | 2.209010e-49 |
| MsG0380017728.01 | MsG0580025992.01 | 0.854814 | 9.581808e-62 | 2.166941e-58 |
| MsG0380017884.01 | MsG0580025992.01 | 0.804842 | 1.778917e-49 | 9.268835e-47 |
| MsG0380017976.01 | MsG0580025992.01 | 0.834275 | 3.293376e-56 | 3.889425e-53 |
| MsG0380018069.01 | MsG0580025992.01 | 0.833942 | 3.990555e-56 | 4.666236e-53 |
| MsG0480018324.01 | MsG0580025992.01 | 0.812827 | 3.485051e-51 | 2.238480e-48 |
| MsG0280006805.01 | MsG0580025992.01 | 0.822385 | 2.436799e-53 | 2.036683e-50 |
| MsG0280007075.01 | MsG0580025992.01 | 0.800414 | 1.457325e-48 | 6.781810e-46 |
| MsG0280008227.01 | MsG0580025992.01 | 0.820622 | 6.221941e-53 | 4.947953e-50 |
| MsG0280009756.01 | MsG0580025992.01 | 0.804552 | 2.045359e-49 | 1.057669e-46 |
| MsG0280009761.01 | MsG0580025992.01 | 0.805998 | 1.018087e-49 | 5.464523e-47 |
| MsG0280009863.01 | MsG0580025992.01 | 0.838189 | 3.334144e-57 | 4.431529e-54 |
| MsG0280010353.01 | MsG0580025992.01 | 0.821365 | 4.196503e-53 | 3.407157e-50 |
| MsG0280010376.01 | MsG0580025992.01 | 0.801065 | 1.073618e-48 | 5.079360e-46 |
| MsG0280010496.01 | MsG0580025992.01 | 0.856650 | 2.787540e-62 | 6.699543e-59 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025992.01.T01 | MTR_5g037230 | 84.862 | 218 | 7 | 2 | 1 | 218 | 1 | 192 | 1.61e-128 | 360 |
| MsG0580025992.01.T01 | MTR_3g040420 | 81.308 | 107 | 12 | 1 | 1 | 107 | 1 | 99 | 7.06e-55 | 171 |
| MsG0580025992.01.T01 | MTR_0065s0080 | 82.407 | 108 | 11 | 1 | 1 | 108 | 1 | 100 | 5.20e-46 | 148 |
| MsG0580025992.01.T01 | MTR_1g116050 | 77.570 | 107 | 16 | 1 | 2 | 108 | 3 | 101 | 8.37e-44 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025992.01.T01 | AT1G69935 | 58.333 | 108 | 27 | 1 | 100 | 207 | 97 | 186 | 2.46e-35 | 124 |
| MsG0580025992.01.T01 | AT4G33780 | 43.925 | 107 | 42 | 1 | 99 | 205 | 95 | 183 | 3.43e-22 | 90.5 |
| MsG0580025992.01.T01 | AT1G69935 | 54.667 | 75 | 16 | 1 | 100 | 174 | 97 | 153 | 3.79e-17 | 75.9 |
Find 43 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTGTATTTGCTGCAATTT+TGG | 0.129989 | 5:+28762462 | MsG0580025992.01.T01:CDS |
| TGTTTAAGAAAATGTCTAAA+AGG | 0.262129 | 5:+28759716 | MsG0580025992.01.T01:CDS |
| AATGTCTAAAAGGGCTAAAA+AGG | 0.323229 | 5:+28759726 | MsG0580025992.01.T01:CDS |
| GTAGTAGAGTTTGGAAGAAA+AGG | 0.351001 | 5:-28759394 | None:intergenic |
| ACGATGGTTGTAGTAGAGTT+TGG | 0.361096 | 5:-28759403 | None:intergenic |
| TTGCAGGTCATCTGCAACAT+TGG | 0.387086 | 5:+28762436 | MsG0580025992.01.T01:intron |
| TTCACTAAGTTGGCGAAATC+CGG | 0.407060 | 5:+28759814 | MsG0580025992.01.T01:CDS |
| TAGTAGAGTTTGGAAGAAAA+GGG | 0.416897 | 5:-28759393 | None:intergenic |
| TTCTGAGAAGTGGTGAAGAT+TGG | 0.421457 | 5:-28759343 | None:intergenic |
| AATCAAGGGAACAATTCCTT+TGG | 0.435782 | 5:+28762541 | MsG0580025992.01.T01:CDS |
| CTTAGTGAAGACTGAAGAAA+AGG | 0.437049 | 5:-28759800 | None:intergenic |
| TTCTTCAGTCTTCACTAAGT+TGG | 0.450415 | 5:+28759804 | MsG0580025992.01.T01:CDS |
| ACACCTTCATCAATCTCATA+TGG | 0.466013 | 5:-28759604 | None:intergenic |
| TTGATTGAAACTATTCCCAT+TGG | 0.473388 | 5:-28762524 | None:intergenic |
| TTTGGCCCTGCGTGTGATAT+GGG | 0.475980 | 5:+28762480 | MsG0580025992.01.T01:CDS |
| TTCTTTCTCAACACCAAGGA+TGG | 0.476413 | 5:-28762635 | None:intergenic |
| GTTTCTCACTTCCAGTCCAA+TGG | 0.484407 | 5:+28762508 | MsG0580025992.01.T01:CDS |
| ATAGCCTAGACATCTTCATA+TGG | 0.489123 | 5:+28762568 | MsG0580025992.01.T01:exon |
| TTTCTCACTTCCAGTCCAAT+GGG | 0.491752 | 5:+28762509 | MsG0580025992.01.T01:CDS |
| AATGGGAATAGTTTCAATCA+AGG | 0.493079 | 5:+28762526 | MsG0580025992.01.T01:CDS |
| GTTTAAGAAAATGTCTAAAA+GGG | 0.503270 | 5:+28759717 | MsG0580025992.01.T01:CDS |
| CAGCTGAATAAAACCATCCT+TGG | 0.506850 | 5:+28762622 | MsG0580025992.01.T01:three_prime_UTR |
| TGAAACTATTCCCATTGGAC+TGG | 0.507228 | 5:-28762519 | None:intergenic |
| CTTTCCATATGAAGATGTCT+AGG | 0.522812 | 5:-28762572 | None:intergenic |
| AAGGAGAAACTTACGAGTTG+AGG | 0.534806 | 5:-28759781 | None:intergenic |
| AGAGTTTGGAAGAAAAGGGT+TGG | 0.542234 | 5:-28759389 | None:intergenic |
| CTTCATATGGAAAGTTCTTG+AGG | 0.549749 | 5:+28762581 | MsG0580025992.01.T01:three_prime_UTR |
| AAGTGGTGAAGATTGGAGCA+TGG | 0.552992 | 5:-28759336 | None:intergenic |
| CAGGTCATCTGCAACATTGG+AGG | 0.554407 | 5:+28762439 | MsG0580025992.01.T01:intron |
| ATGGGAATAGTTTCAATCAA+GGG | 0.569470 | 5:+28762527 | MsG0580025992.01.T01:CDS |
| AATCATCAATTGCAATAGCA+AGG | 0.575080 | 5:+28759437 | MsG0580025992.01.T01:CDS |
| TGTCTAGGCTATAGCACCAA+AGG | 0.578357 | 5:-28762557 | None:intergenic |
| TGTTGTCAAAGCACTTCTTG+AGG | 0.596810 | 5:+28761420 | MsG0580025992.01.T01:CDS |
| AGCTGCCCATATCACACGCA+GGG | 0.602607 | 5:-28762485 | None:intergenic |
| GAACCATATGAGATTGATGA+AGG | 0.606231 | 5:+28759601 | MsG0580025992.01.T01:CDS |
| TAGCTGAATAACTCAAGTGG+TGG | 0.614691 | 5:+28759577 | MsG0580025992.01.T01:intron |
| TTGTAGCTGAATAACTCAAG+TGG | 0.616039 | 5:+28759574 | MsG0580025992.01.T01:intron |
| AGTTGAGGAGATATCACTGT+AGG | 0.617126 | 5:-28759766 | None:intergenic |
| GTGAAGATTGGAGCATGGAG+AGG | 0.628672 | 5:-28759331 | None:intergenic |
| TTTCTTCTTTCTCAACACCA+AGG | 0.644519 | 5:-28762639 | None:intergenic |
| CAGCTGCCCATATCACACGC+AGG | 0.644863 | 5:-28762486 | None:intergenic |
| GGGATATGATGGGATTGAAG+AGG | 0.656878 | 5:+28759633 | MsG0580025992.01.T01:CDS |
| TAGTATGTAAGACTCATGTG+TGG | 0.726480 | 5:-28762716 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATAAAAAAGAAAATAG+CGG | - | Chr5:28761508-28761527 | None:intergenic | 10.0% |
| !!! | AAAAAATTGTTTTTAGAAAA+TGG | + | Chr5:28759507-28759526 | MsG0580025992.01.T01:intron | 10.0% |
| !!! | AAAAATTGTTTTTAGAAAAT+GGG | + | Chr5:28759508-28759527 | MsG0580025992.01.T01:intron | 10.0% |
| !!! | TTAGATTATTCTTATATTTT+TGG | + | Chr5:28762271-28762290 | MsG0580025992.01.T01:intron | 10.0% |
| !!! | ATGATAGTAATTTAAAATGA+AGG | - | Chr5:28760703-28760722 | None:intergenic | 15.0% |
| !!! | ATGTTTCAAATTTTAAGATT+GGG | + | Chr5:28761070-28761089 | MsG0580025992.01.T01:intron | 15.0% |
| !!! | ATTTTTTATTACAGGTAATA+TGG | - | Chr5:28760491-28760510 | None:intergenic | 15.0% |
| !!! | TTAAAATTTGAAACATGAAA+AGG | - | Chr5:28761066-28761085 | None:intergenic | 15.0% |
| !! | AATCTAAACATACATTAACA+TGG | - | Chr5:28760078-28760097 | None:intergenic | 20.0% |
| !! | GCATTTACTATAGTAAATAT+AGG | + | Chr5:28760144-28760163 | MsG0580025992.01.T01:intron | 20.0% |
| !! | GTTTAAGAAAATGTCTAAAA+GGG | + | Chr5:28759717-28759736 | MsG0580025992.01.T01:CDS | 20.0% |
| !! | TACTATAGTAAATATAGGTT+AGG | + | Chr5:28760149-28760168 | MsG0580025992.01.T01:intron | 20.0% |
| !! | TATTTCATTTAAATGCTCTT+GGG | + | Chr5:28760429-28760448 | MsG0580025992.01.T01:intron | 20.0% |
| !! | TGTTTAAGAAAATGTCTAAA+AGG | + | Chr5:28759716-28759735 | MsG0580025992.01.T01:CDS | 20.0% |
| !! | TTAATGTATGTTTAGATTTG+TGG | + | Chr5:28760080-28760099 | MsG0580025992.01.T01:intron | 20.0% |
| !! | TTAATTCTCTTTCTAGATAA+TGG | + | Chr5:28762121-28762140 | MsG0580025992.01.T01:intron | 20.0% |
| !! | TTATTTCATTTAAATGCTCT+TGG | + | Chr5:28760428-28760447 | MsG0580025992.01.T01:intron | 20.0% |
| !! | TTTAAAAGTGATAAGCAATT+GGG | - | Chr5:28760013-28760032 | None:intergenic | 20.0% |
| !!! | ACTCTTACACTTTTTATTAT+TGG | - | Chr5:28760848-28760867 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTTGTTCAGTACA+AGG | - | Chr5:28760902-28760921 | None:intergenic | 20.0% |
| !!! | CATGTTTCAAATTTTAAGAT+TGG | + | Chr5:28761069-28761088 | MsG0580025992.01.T01:intron | 20.0% |
| !!! | TGTTTCAAATTTTAAGATTG+GGG | + | Chr5:28761071-28761090 | MsG0580025992.01.T01:intron | 20.0% |
| !!! | TTTTCATTTTGCTTCTTATT+TGG | + | Chr5:28761339-28761358 | MsG0580025992.01.T01:intron | 20.0% |
| ! | ATATAAGCTAACCAAAAGTA+TGG | + | Chr5:28762309-28762328 | MsG0580025992.01.T01:intron | 25.0% |
| ! | CTAGTGTTTAGAAATCAAAA+TGG | - | Chr5:28761233-28761252 | None:intergenic | 25.0% |
| ! | GAAAATGTTGACAAAGTAAA+CGG | - | Chr5:28761607-28761626 | None:intergenic | 25.0% |
| ! | GAATTTCTTTGCTTTATAAC+TGG | + | Chr5:28762361-28762380 | MsG0580025992.01.T01:intron | 25.0% |
| ! | GTTTAAAAGTGATAAGCAAT+TGG | - | Chr5:28760014-28760033 | None:intergenic | 25.0% |
| ! | TAAGAAGCAAAATGAAAAAG+CGG | - | Chr5:28761337-28761356 | None:intergenic | 25.0% |
| ! | TCTAGAAAGAGAATTAAGAA+AGG | - | Chr5:28762118-28762137 | None:intergenic | 25.0% |
| ! | TGATTATTCATGATCACTAA+TGG | - | Chr5:28760175-28760194 | None:intergenic | 25.0% |
| ! | TTTCCTACTTATTCAACTTA+AGG | + | Chr5:28760582-28760601 | MsG0580025992.01.T01:intron | 25.0% |
| !! | ATGACATTTTTGTATAAACC+GGG | + | Chr5:28760271-28760290 | MsG0580025992.01.T01:intron | 25.0% |
| !! | CATGACATTTTTGTATAAAC+CGG | + | Chr5:28760270-28760289 | MsG0580025992.01.T01:intron | 25.0% |
| !! | CATTTAAATTGACTTCTTAG+AGG | + | Chr5:28760817-28760836 | MsG0580025992.01.T01:intron | 25.0% |
| !! | GTTTGATTCTGCTTAATTTT+TGG | - | Chr5:28761184-28761203 | None:intergenic | 25.0% |
| !!! | AAACACTACACTCTTTTTTT+TGG | - | Chr5:28760636-28760655 | None:intergenic | 25.0% |
| !!! | AACACTACACTCTTTTTTTT+GGG | - | Chr5:28760635-28760654 | None:intergenic | 25.0% |
| !!! | AACGCTACATTTTTTATTAC+AGG | - | Chr5:28760499-28760518 | None:intergenic | 25.0% |
| !!! | AATTATCACATTCTGAAGTT+TGG | + | Chr5:28760674-28760693 | MsG0580025992.01.T01:intron | 25.0% |
| !!! | ATTTTGCTTCTTATTTGGAT+CGG | + | Chr5:28761344-28761363 | MsG0580025992.01.T01:intron | 25.0% |
| !!! | CATTTTGATTTCTAAACACT+AGG | + | Chr5:28761231-28761250 | MsG0580025992.01.T01:intron | 25.0% |
| !!! | GGTGCTTTTTTTAAAAGTTT+AGG | + | Chr5:28761280-28761299 | MsG0580025992.01.T01:intron | 25.0% |
| AAACAATTATTGTTCCTTGG+TGG | + | Chr5:28759968-28759987 | MsG0580025992.01.T01:intron | 30.0% | |
| AAAGCAAAGAAATTCTGTGA+AGG | - | Chr5:28762356-28762375 | None:intergenic | 30.0% | |
| AACCATCACAAAATTCACTA+AGG | - | Chr5:28761014-28761033 | None:intergenic | 30.0% | |
| AAGTAGTAGCTAACAACAAT+CGG | + | Chr5:28762396-28762415 | MsG0580025992.01.T01:intron | 30.0% | |
| AATCATCAATTGCAATAGCA+AGG | + | Chr5:28759437-28759456 | MsG0580025992.01.T01:CDS | 30.0% | |
| AATGGGAATAGTTTCAATCA+AGG | + | Chr5:28762526-28762545 | MsG0580025992.01.T01:CDS | 30.0% | |
| AATGTCTAAAAGGGCTAAAA+AGG | + | Chr5:28759726-28759745 | MsG0580025992.01.T01:CDS | 30.0% | |
| AGTGAACTTGAACAGTTATT+GGG | + | Chr5:28762241-28762260 | MsG0580025992.01.T01:intron | 30.0% | |
| AGTTGAATAAGTAGGAAATC+CGG | - | Chr5:28760580-28760599 | None:intergenic | 30.0% | |
| ATGGGAATAGTTTCAATCAA+GGG | + | Chr5:28762527-28762546 | MsG0580025992.01.T01:CDS | 30.0% | |
| CAACTAATTTAAACGCTCTT+GGG | + | Chr5:28760781-28760800 | MsG0580025992.01.T01:intron | 30.0% | |
| CCAAGGAACAATAATTGTTT+AGG | - | Chr5:28759968-28759987 | None:intergenic | 30.0% | |
| CCTAAACAATTATTGTTCCT+TGG | + | Chr5:28759965-28759984 | MsG0580025992.01.T01:intron | 30.0% | |
| GATAACATTTGTGTAGTTTG+AGG | + | Chr5:28762184-28762203 | MsG0580025992.01.T01:intron | 30.0% | |
| GTACATCACTAGTAATTAGT+CGG | + | Chr5:28760924-28760943 | MsG0580025992.01.T01:intron | 30.0% | |
| TAGAATATAAATGTGCTGCA+TGG | + | Chr5:28761259-28761278 | MsG0580025992.01.T01:intron | 30.0% | |
| TAGTAGAGTTTGGAAGAAAA+GGG | - | Chr5:28759396-28759415 | None:intergenic | 30.0% | |
| TCAACTAATTTAAACGCTCT+TGG | + | Chr5:28760780-28760799 | MsG0580025992.01.T01:intron | 30.0% | |
| TCATTTCCTAAAACTTGTGT+TGG | + | Chr5:28761632-28761651 | MsG0580025992.01.T01:intron | 30.0% | |
| TCCTGACCATTAAATCAAAT+CGG | + | Chr5:28761830-28761849 | MsG0580025992.01.T01:intron | 30.0% | |
| TTGATTGAAACTATTCCCAT+TGG | - | Chr5:28762527-28762546 | None:intergenic | 30.0% | |
| ! | AAGAGTCTCTTTTCTCATAT+TGG | + | Chr5:28762000-28762019 | MsG0580025992.01.T01:intron | 30.0% |
| ! | ATTTTTGTGTGTTAACCCTT+CGG | + | Chr5:28759838-28759857 | MsG0580025992.01.T01:intron | 30.0% |
| ! | CAAACATGCAATTTTTCATG+AGG | + | Chr5:28761199-28761218 | MsG0580025992.01.T01:intron | 30.0% |
| ! | CTTTTAAACGAGTTATCCTT+AGG | + | Chr5:28760025-28760044 | MsG0580025992.01.T01:intron | 30.0% |
| ! | GTAAAACCAACACAAGTTTT+AGG | - | Chr5:28761641-28761660 | None:intergenic | 30.0% |
| ! | TTCCTAGGTGAAACAATTTT+TGG | - | Chr5:28759930-28759949 | None:intergenic | 30.0% |
| !! | TCACCTTAAGTTGAATAAGT+AGG | - | Chr5:28760588-28760607 | None:intergenic | 30.0% |
| !! | TGTGATAGTTTTACAGAGAA+TGG | - | Chr5:28760229-28760248 | None:intergenic | 30.0% |
| !! | TTTTGCTTCTTATTTGGATC+GGG | + | Chr5:28761345-28761364 | MsG0580025992.01.T01:intron | 30.0% |
| !!! | AGATTGATGAAGGTGTTTTT+GGG | + | Chr5:28759611-28759630 | MsG0580025992.01.T01:CDS | 30.0% |
| !!! | GAACTCAGTTTTTTATCCTA+AGG | - | Chr5:28760044-28760063 | None:intergenic | 30.0% |
| !!! | TGATTTTGAGATTTGAACGA+TGG | - | Chr5:28759422-28759441 | None:intergenic | 30.0% |
| !!! | TTTAAGATTGGGGTTTTGTT+TGG | + | Chr5:28761081-28761100 | MsG0580025992.01.T01:intron | 30.0% |
| AATCAAGGGAACAATTCCTT+TGG | + | Chr5:28762541-28762560 | MsG0580025992.01.T01:CDS | 35.0% | |
| AATGCATGTTTGACAGAATC+AGG | - | Chr5:28760129-28760148 | None:intergenic | 35.0% | |
| AATGTTGACAAAGTAAACGG+AGG | - | Chr5:28761604-28761623 | None:intergenic | 35.0% | |
| AATTTAAACGCTCTTGGGTT+GGG | + | Chr5:28760786-28760805 | MsG0580025992.01.T01:intron | 35.0% | |
| ACACCTTCATCAATCTCATA+TGG | - | Chr5:28759607-28759626 | None:intergenic | 35.0% | |
| AGTAGTAGCTAACAACAATC+GGG | + | Chr5:28762397-28762416 | MsG0580025992.01.T01:intron | 35.0% | |
| ATAGCCTAGACATCTTCATA+TGG | + | Chr5:28762568-28762587 | MsG0580025992.01.T01:exon | 35.0% | |
| CAACAATAAAACTCATGAGC+AGG | - | Chr5:28760353-28760372 | None:intergenic | 35.0% | |
| CTTAGTGAAGACTGAAGAAA+AGG | - | Chr5:28759803-28759822 | None:intergenic | 35.0% | |
| CTTCATATGGAAAGTTCTTG+AGG | + | Chr5:28762581-28762600 | MsG0580025992.01.T01:three_prime_UTR | 35.0% | |
| CTTTCCATATGAAGATGTCT+AGG | - | Chr5:28762575-28762594 | None:intergenic | 35.0% | |
| GAACCATATGAGATTGATGA+AGG | + | Chr5:28759601-28759620 | MsG0580025992.01.T01:CDS | 35.0% | |
| GACCATTAAATCAAATCGGA+CGG | + | Chr5:28761834-28761853 | MsG0580025992.01.T01:intron | 35.0% | |
| GAGTGAACTTGAACAGTTAT+TGG | + | Chr5:28762240-28762259 | MsG0580025992.01.T01:intron | 35.0% | |
| GGTATATATAACATCCGTCT+GGG | - | Chr5:28762698-28762717 | None:intergenic | 35.0% | |
| GTAGTAGAGTTTGGAAGAAA+AGG | - | Chr5:28759397-28759416 | None:intergenic | 35.0% | |
| GTCGCTTCTAACTTAATCAA+AGG | - | Chr5:28760403-28760422 | None:intergenic | 35.0% | |
| GTTGAATAAGTAGGAAATCC+GGG | - | Chr5:28760579-28760598 | None:intergenic | 35.0% | |
| TAATTTAAACGCTCTTGGGT+TGG | + | Chr5:28760785-28760804 | MsG0580025992.01.T01:intron | 35.0% | |
| TAGTATGTAAGACTCATGTG+TGG | - | Chr5:28762719-28762738 | None:intergenic | 35.0% | |
| TGAGTTCGAACTCTCAAAAA+TGG | - | Chr5:28760729-28760748 | None:intergenic | 35.0% | |
| TGGTATATATAACATCCGTC+TGG | - | Chr5:28762699-28762718 | None:intergenic | 35.0% | |
| TTATTTGGATCGGGAAATTC+AGG | + | Chr5:28761354-28761373 | MsG0580025992.01.T01:intron | 35.0% | |
| TTCACTAAGGAGTTACAAAG+AGG | - | Chr5:28761001-28761020 | None:intergenic | 35.0% | |
| TTCTTCAGTCTTCACTAAGT+TGG | + | Chr5:28759804-28759823 | MsG0580025992.01.T01:CDS | 35.0% | |
| TTGAATAAGTAGGAAATCCG+GGG | - | Chr5:28760578-28760597 | None:intergenic | 35.0% | |
| TTGTAGCTGAATAACTCAAG+TGG | + | Chr5:28759574-28759593 | MsG0580025992.01.T01:intron | 35.0% | |
| TTTCTTCTTTCTCAACACCA+AGG | - | Chr5:28762642-28762661 | None:intergenic | 35.0% | |
| ! | AAAGAAGATAAAGTGCTAGC+TGG | + | Chr5:28761705-28761724 | MsG0580025992.01.T01:intron | 35.0% |
| ! | ATGCAATTTTTCATGAGGCA+TGG | + | Chr5:28761204-28761223 | MsG0580025992.01.T01:intron | 35.0% |
| ! | ATTGTTTCTTCACTACTGTG+TGG | + | Chr5:28761444-28761463 | MsG0580025992.01.T01:intron | 35.0% |
| ! | CAATTCCAGAACCATACTTT+TGG | - | Chr5:28762323-28762342 | None:intergenic | 35.0% |
| ! | CTCCTTAGTGAATTTTGTGA+TGG | + | Chr5:28761009-28761028 | MsG0580025992.01.T01:intron | 35.0% |
| ! | CTTGAGGTGCATATTTTATG+TGG | + | Chr5:28762597-28762616 | MsG0580025992.01.T01:three_prime_UTR | 35.0% |
| ! | GAATATTGACTGTGAATTGC+AGG | + | Chr5:28762420-28762439 | MsG0580025992.01.T01:intron | 35.0% |
| ! | TCCGATTTGATTTAATGGTC+AGG | - | Chr5:28761834-28761853 | None:intergenic | 35.0% |
| ! | TTTTTGTATAAACCGGGCTT+CGG | + | Chr5:28760277-28760296 | MsG0580025992.01.T01:intron | 35.0% |
| !! | CACTGTATTTGCTGCAATTT+TGG | + | Chr5:28762462-28762481 | MsG0580025992.01.T01:CDS | 35.0% |
| !! | GAACATTGTTTTCTGAGAAG+TGG | - | Chr5:28759356-28759375 | None:intergenic | 35.0% |
| !! | GTTTGGATTAGCTAATCTTG+TGG | + | Chr5:28761098-28761117 | MsG0580025992.01.T01:intron | 35.0% |
| !! | TTTTGGGTCAATTAGCATAG+TGG | - | Chr5:28760619-28760638 | None:intergenic | 35.0% |
| !! | TTTTTGAGAGTTCGAACTCA+AGG | + | Chr5:28760729-28760748 | MsG0580025992.01.T01:intron | 35.0% |
| !!! | AGGTTTCTTTTGCTGTTGAT+GGG | + | Chr5:28761374-28761393 | MsG0580025992.01.T01:intron | 35.0% |
| !!! | ATTGATGAAGGTGTTTTTGG+GGG | + | Chr5:28759613-28759632 | MsG0580025992.01.T01:CDS | 35.0% |
| !!! | GAGATTGATGAAGGTGTTTT+TGG | + | Chr5:28759610-28759629 | MsG0580025992.01.T01:CDS | 35.0% |
| !!! | GATTGATGAAGGTGTTTTTG+GGG | + | Chr5:28759612-28759631 | MsG0580025992.01.T01:CDS | 35.0% |
| !!! | TAGGTGAAACAATTTTTGGC+CGG | - | Chr5:28759926-28759945 | None:intergenic | 35.0% |
| AAGAGGAGAAGGAAACTTGA+AGG | - | Chr5:28760984-28761003 | None:intergenic | 40.0% | |
| AAGGAGAAACTTACGAGTTG+AGG | - | Chr5:28759784-28759803 | None:intergenic | 40.0% | |
| AAGGAGTTACAAAGAGGAGA+AGG | - | Chr5:28760995-28761014 | None:intergenic | 40.0% | |
| ACCGTTCGATGTGATATCAA+TGG | - | Chr5:28761786-28761805 | None:intergenic | 40.0% | |
| ACGATGGTTGTAGTAGAGTT+TGG | - | Chr5:28759406-28759425 | None:intergenic | 40.0% | |
| ACTTGAACAGTTATTGGGAC+TGG | + | Chr5:28762246-28762265 | MsG0580025992.01.T01:intron | 40.0% | |
| AGAGTTTGGAAGAAAAGGGT+TGG | - | Chr5:28759392-28759411 | None:intergenic | 40.0% | |
| AGCTAGGGATGTTGTATTTC+AGG | + | Chr5:28761911-28761930 | MsG0580025992.01.T01:intron | 40.0% | |
| AGTTGAGGAGATATCACTGT+AGG | - | Chr5:28759769-28759788 | None:intergenic | 40.0% | |
| CAGCTGAATAAAACCATCCT+TGG | + | Chr5:28762622-28762641 | MsG0580025992.01.T01:three_prime_UTR | 40.0% | |
| GCAAAATGAAAAAGCGGTCA+AGG | - | Chr5:28761331-28761350 | None:intergenic | 40.0% | |
| GCCATTGATATCACATCGAA+CGG | + | Chr5:28761782-28761801 | MsG0580025992.01.T01:intron | 40.0% | |
| GGCCAAAAATTGTTTCACCT+AGG | + | Chr5:28759925-28759944 | MsG0580025992.01.T01:intron | 40.0% | |
| GGGTTAACACACAAAAATGC+CGG | - | Chr5:28759836-28759855 | None:intergenic | 40.0% | |
| GTAGTAGCTAACAACAATCG+GGG | + | Chr5:28762398-28762417 | MsG0580025992.01.T01:intron | 40.0% | |
| TAGCTGAATAACTCAAGTGG+TGG | + | Chr5:28759577-28759596 | MsG0580025992.01.T01:intron | 40.0% | |
| TGAAACTATTCCCATTGGAC+TGG | - | Chr5:28762522-28762541 | None:intergenic | 40.0% | |
| TTCTTTCTCAACACCAAGGA+TGG | - | Chr5:28762638-28762657 | None:intergenic | 40.0% | |
| TTTATTACAGCAGGGAATCC+TGG | - | Chr5:28761732-28761751 | None:intergenic | 40.0% | |
| TTTCACCTAGGAATCGAACT+CGG | + | Chr5:28759937-28759956 | MsG0580025992.01.T01:intron | 40.0% | |
| TTTCTCACTTCCAGTCCAAT+GGG | + | Chr5:28762509-28762528 | MsG0580025992.01.T01:CDS | 40.0% | |
| ! | AGGACGAGTCATTGTGATTT+TGG | - | Chr5:28760109-28760128 | None:intergenic | 40.0% |
| ! | GACCCTTGTAATCTAGAGTT+CGG | + | Chr5:28759882-28759901 | MsG0580025992.01.T01:intron | 40.0% |
| ! | GCTAACCAAAAGTATGGTTC+TGG | + | Chr5:28762315-28762334 | MsG0580025992.01.T01:intron | 40.0% |
| ! | TGTTAACCCTTCGGTTTTCA+GGG | + | Chr5:28759847-28759866 | MsG0580025992.01.T01:intron | 40.0% |
| ! | TGTTGTCAAAGCACTTCTTG+AGG | + | Chr5:28761420-28761439 | MsG0580025992.01.T01:CDS | 40.0% |
| ! | TTAAATGCTCTTGGGTTGCA+TGG | + | Chr5:28760437-28760456 | MsG0580025992.01.T01:intron | 40.0% |
| ! | TTCACTAAGTTGGCGAAATC+CGG | + | Chr5:28759814-28759833 | MsG0580025992.01.T01:CDS | 40.0% |
| ! | TTCTGAGAAGTGGTGAAGAT+TGG | - | Chr5:28759346-28759365 | None:intergenic | 40.0% |
| ! | TTTTGTATAAACCGGGCTTC+GGG | + | Chr5:28760278-28760297 | MsG0580025992.01.T01:intron | 40.0% |
| !!! | CAGGTTTCTTTTGCTGTTGA+TGG | + | Chr5:28761373-28761392 | MsG0580025992.01.T01:intron | 40.0% |
| !!! | CTCAAGGTTTTTAGTCGAAC+TGG | + | Chr5:28760745-28760764 | MsG0580025992.01.T01:intron | 40.0% |
| !!! | GTGTTTTTGGGGGATATGAT+GGG | + | Chr5:28759623-28759642 | MsG0580025992.01.T01:CDS | 40.0% |
| AAAGGGCTAAAAAGGCTTCG+AGG | + | Chr5:28759734-28759753 | MsG0580025992.01.T01:CDS | 45.0% | |
| AAGTGGTGAAGATTGGAGCA+TGG | - | Chr5:28759339-28759358 | None:intergenic | 45.0% | |
| ATATCCCTACCAACTGCTCA+CGG | - | Chr5:28760528-28760547 | None:intergenic | 45.0% | |
| GATAAGCAATTGGGCTCAAG+TGG | - | Chr5:28760004-28760023 | None:intergenic | 45.0% | |
| GGCCGAACTCTAGATTACAA+GGG | - | Chr5:28759887-28759906 | None:intergenic | 45.0% | |
| GTGTCTGAATTACACCCAGA+CGG | + | Chr5:28762681-28762700 | MsG0580025992.01.T01:intron | 45.0% | |
| GTTTCTCACTTCCAGTCCAA+TGG | + | Chr5:28762508-28762527 | MsG0580025992.01.T01:CDS | 45.0% | |
| TAACAGCAGGAAATCCAGTC+CGG | + | Chr5:28761883-28761902 | MsG0580025992.01.T01:intron | 45.0% | |
| TGGCCGAACTCTAGATTACA+AGG | - | Chr5:28759888-28759907 | None:intergenic | 45.0% | |
| TGTCTAGGCTATAGCACCAA+AGG | - | Chr5:28762560-28762579 | None:intergenic | 45.0% | |
| TTCACCTAGGAATCGAACTC+GGG | + | Chr5:28759938-28759957 | MsG0580025992.01.T01:intron | 45.0% | |
| TTGCAGGTCATCTGCAACAT+TGG | + | Chr5:28762436-28762455 | MsG0580025992.01.T01:intron | 45.0% | |
| ! | ACTGCGTGCTTTATTACAGC+AGG | - | Chr5:28761741-28761760 | None:intergenic | 45.0% |
| ! | CTGCGTGCTTTATTACAGCA+GGG | - | Chr5:28761740-28761759 | None:intergenic | 45.0% |
| ! | GGCCGTCCGATTTGATTTAA+TGG | - | Chr5:28761839-28761858 | None:intergenic | 45.0% |
| ! | GGGATATGATGGGATTGAAG+AGG | + | Chr5:28759633-28759652 | MsG0580025992.01.T01:CDS | 45.0% |
| ! | GTGTTAACCCTTCGGTTTTC+AGG | + | Chr5:28759846-28759865 | MsG0580025992.01.T01:intron | 45.0% |
| ! | GTTAACCCTTCGGTTTTCAG+GGG | + | Chr5:28759848-28759867 | MsG0580025992.01.T01:intron | 45.0% |
| !! | AGCAGTTGGTAGGGATATTG+CGG | + | Chr5:28760530-28760549 | MsG0580025992.01.T01:intron | 45.0% |
| !!! | GGTGTTTTTGGGGGATATGA+TGG | + | Chr5:28759622-28759641 | MsG0580025992.01.T01:CDS | 45.0% |
| AGAACCCGAGTTCGATTCCT+AGG | - | Chr5:28759945-28759964 | None:intergenic | 50.0% | |
| AGCGGTCAAGGACACATTGA+AGG | - | Chr5:28761319-28761338 | None:intergenic | 50.0% | |
| ATATTGCGGTATGCAGGAGC+TGG | + | Chr5:28760544-28760563 | MsG0580025992.01.T01:intron | 50.0% | |
| ATCGGAATGCAACCCTGAGT+CGG | + | Chr5:28760302-28760321 | MsG0580025992.01.T01:intron | 50.0% | |
| CAACATCCCTAGCTAAGCAC+CGG | - | Chr5:28761905-28761924 | None:intergenic | 50.0% | |
| CACCGTAGGCTGAGTTATGT+GGG | + | Chr5:28762156-28762175 | MsG0580025992.01.T01:intron | 50.0% | |
| CAGGACGCTGTAACAGATCA+GGG | - | Chr5:28761860-28761879 | None:intergenic | 50.0% | |
| CAGGTCATCTGCAACATTGG+AGG | + | Chr5:28762439-28762458 | MsG0580025992.01.T01:intron | 50.0% | |
| CCTATCCCCTGAAAACCGAA+GGG | - | Chr5:28759856-28759875 | None:intergenic | 50.0% | |
| CTCCCACATAACTCAGCCTA+CGG | - | Chr5:28762161-28762180 | None:intergenic | 50.0% | |
| GGATTTCCTGCTGTTACAGC+AGG | - | Chr5:28761879-28761898 | None:intergenic | 50.0% | |
| GTAGGCTGAGTTATGTGGGA+GGG | + | Chr5:28762160-28762179 | MsG0580025992.01.T01:intron | 50.0% | |
| GTAGGGATATTGCGGTATGC+AGG | + | Chr5:28760538-28760557 | MsG0580025992.01.T01:intron | 50.0% | |
| GTGAAGATTGGAGCATGGAG+AGG | - | Chr5:28759334-28759353 | None:intergenic | 50.0% | |
| GTGGTTAATGAGCTCCACCA+AGG | - | Chr5:28759985-28760004 | None:intergenic | 50.0% | |
| TATCCCTACCAACTGCTCAC+GGG | - | Chr5:28760527-28760546 | None:intergenic | 50.0% | |
| TATTGCGGTATGCAGGAGCT+GGG | + | Chr5:28760545-28760564 | MsG0580025992.01.T01:intron | 50.0% | |
| TTTGGCCCTGCGTGTGATAT+GGG | + | Chr5:28762480-28762499 | MsG0580025992.01.T01:CDS | 50.0% | |
| ! | CAGGAGTTTTGCCACTCATG+TGG | - | Chr5:28760334-28760353 | None:intergenic | 50.0% |
| ! | GATAAAGTGCTAGCTGGACC+AGG | + | Chr5:28761711-28761730 | MsG0580025992.01.T01:intron | 50.0% |
| ! | TTTTGGCCCTGCGTGTGATA+TGG | + | Chr5:28762479-28762498 | MsG0580025992.01.T01:CDS | 50.0% |
| !! | CCTTCGGTTTTCAGGGGATA+GGG | + | Chr5:28759854-28759873 | MsG0580025992.01.T01:intron | 50.0% |
| AATGCAACCCTGAGTCGGGT+GGG | + | Chr5:28760307-28760326 | MsG0580025992.01.T01:intron | 55.0% | |
| AGCTGCCCATATCACACGCA+GGG | - | Chr5:28762488-28762507 | None:intergenic | 55.0% | |
| ATAAACCGGGCTTCGGGCAT+CGG | + | Chr5:28760284-28760303 | MsG0580025992.01.T01:intron | 55.0% | |
| ATCCAGTCCGGTGCTTAGCT+AGG | + | Chr5:28761895-28761914 | MsG0580025992.01.T01:intron | 55.0% | |
| ATCCCTACCAACTGCTCACG+GGG | - | Chr5:28760526-28760545 | None:intergenic | 55.0% | |
| ATTGCGGTATGCAGGAGCTG+GGG | + | Chr5:28760546-28760565 | MsG0580025992.01.T01:intron | 55.0% | |
| CCCTATCCCCTGAAAACCGA+AGG | - | Chr5:28759857-28759876 | None:intergenic | 55.0% | |
| CGTAGGCTGAGTTATGTGGG+AGG | + | Chr5:28762159-28762178 | MsG0580025992.01.T01:intron | 55.0% | |
| GCACCGTAGGCTGAGTTATG+TGG | + | Chr5:28762155-28762174 | MsG0580025992.01.T01:intron | 55.0% | |
| GCAGGACGCTGTAACAGATC+AGG | - | Chr5:28761861-28761880 | None:intergenic | 55.0% | |
| GCCACGAGCTAAGTTAGGTC+CGG | + | Chr5:28759904-28759923 | MsG0580025992.01.T01:intron | 55.0% | |
| GTTCGGCCACGAGCTAAGTT+AGG | + | Chr5:28759899-28759918 | MsG0580025992.01.T01:intron | 55.0% | |
| GTTTAGTCCCCGTGAGCAGT+TGG | + | Chr5:28760516-28760535 | MsG0580025992.01.T01:intron | 55.0% | |
| TCCAGTCCGGTGCTTAGCTA+GGG | + | Chr5:28761896-28761915 | MsG0580025992.01.T01:intron | 55.0% | |
| TCGGAATGCAACCCTGAGTC+GGG | + | Chr5:28760303-28760322 | MsG0580025992.01.T01:intron | 55.0% | |
| !! | CCCTTCGGTTTTCAGGGGAT+AGG | + | Chr5:28759853-28759872 | MsG0580025992.01.T01:intron | 55.0% |
| AGTCCCCGTGAGCAGTTGGT+AGG | + | Chr5:28760520-28760539 | MsG0580025992.01.T01:intron | 60.0% | |
| ATGTGGTCCCACCCGACTCA+GGG | - | Chr5:28760317-28760336 | None:intergenic | 60.0% | |
| CAGCGTCCTGCTGTAACAGC+AGG | + | Chr5:28761870-28761889 | MsG0580025992.01.T01:intron | 60.0% | |
| CAGCTGCCCATATCACACGC+AGG | - | Chr5:28762489-28762508 | None:intergenic | 60.0% | |
| GAATGCAACCCTGAGTCGGG+TGG | + | Chr5:28760306-28760325 | MsG0580025992.01.T01:intron | 60.0% | |
| GCCGGACCTAACTTAGCTCG+TGG | - | Chr5:28759908-28759927 | None:intergenic | 60.0% | |
| GGACTTGCGTGATGCACCGT+AGG | + | Chr5:28762142-28762161 | MsG0580025992.01.T01:intron | 60.0% | |
| ! | GTCCCCGTGAGCAGTTGGTA+GGG | + | Chr5:28760521-28760540 | MsG0580025992.01.T01:intron | 60.0% |
| !! | TCCCTAGCTAAGCACCGGAC+TGG | - | Chr5:28761900-28761919 | None:intergenic | 60.0% |
| AGGAGCTGGGGTTCGAACCC+CGG | + | Chr5:28760558-28760577 | MsG0580025992.01.T01:intron | 65.0% | |
| CATGTGGTCCCACCCGACTC+AGG | - | Chr5:28760318-28760337 | None:intergenic | 65.0% | |
| GCATTCCGATGCCCGAAGCC+CGG | - | Chr5:28760292-28760311 | None:intergenic | 65.0% | |
| GTCGGGTGGGACCACATGAG+TGG | + | Chr5:28760320-28760339 | MsG0580025992.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 28759291 | 28762815 | 28759291 | ID=MsG0580025992.01;Name=MsG0580025992.01 |
| Chr5 | mRNA | 28759291 | 28762815 | 28759291 | ID=MsG0580025992.01.T01;Parent=MsG0580025992.01;Name=MsG0580025992.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0.5|0.6|1|0.25|0.2|5|218|218 |
| Chr5 | exon | 28759291 | 28759482 | 28759291 | ID=MsG0580025992.01.T01:exon:33306;Parent=MsG0580025992.01.T01 |
| Chr5 | exon | 28759580 | 28759843 | 28759580 | ID=MsG0580025992.01.T01:exon:33307;Parent=MsG0580025992.01.T01 |
| Chr5 | exon | 28761376 | 28761441 | 28761376 | ID=MsG0580025992.01.T01:exon:33308;Parent=MsG0580025992.01.T01 |
| Chr5 | exon | 28762442 | 28762678 | 28762442 | ID=MsG0580025992.01.T01:exon:33309;Parent=MsG0580025992.01.T01 |
| Chr5 | exon | 28762700 | 28762815 | 28762700 | ID=MsG0580025992.01.T01:exon:33310;Parent=MsG0580025992.01.T01 |
| Chr5 | CDS | 28759291 | 28759482 | 28759291 | ID=MsG0580025992.01.T01:cds;Parent=MsG0580025992.01.T01 |
| Chr5 | CDS | 28759580 | 28759843 | 28759580 | ID=MsG0580025992.01.T01:cds;Parent=MsG0580025992.01.T01 |
| Chr5 | CDS | 28761376 | 28761441 | 28761376 | ID=MsG0580025992.01.T01:cds;Parent=MsG0580025992.01.T01 |
| Chr5 | CDS | 28762442 | 28762576 | 28762442 | ID=MsG0580025992.01.T01:cds;Parent=MsG0580025992.01.T01 |
| Chr5 | three_prime_UTR | 28762577 | 28762678 | 28762577 | ID=MsG0580025992.01.T01:three_prime_utr;Parent=MsG0580025992.01.T01 |
| Chr5 | three_prime_UTR | 28762700 | 28762815 | 28762700 | ID=MsG0580025992.01.T01:three_prime_utr;Parent=MsG0580025992.01.T01 |
| Gene Sequence |
| Protein sequence |
