AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047670.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047670.01.T01 MTR_4g132500 95.958 569 13 6 2 565 6 569 0.0 1081
MsG0880047670.01.T01 MTR_2g436760 23.491 613 351 22 2 536 26 598 1.31e-22 103
MsG0880047670.01.T01 MTR_1g101620 24.092 523 253 16 68 524 90 534 2.45e-21 99.4
MsG0880047670.01.T01 MTR_6g027620 23.617 470 216 10 114 525 105 489 1.33e-20 97.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047670.01.T01 AT4G04350 71.404 570 150 5 8 566 6 573 0.0 848
MsG0880047670.01.T01 AT1G14610 23.608 521 256 16 66 521 126 569 5.65e-21 98.6
MsG0880047670.01.T01 AT5G49030 29.050 179 110 3 86 250 309 484 3.52e-16 83.2
MsG0880047670.01.T01 AT5G49030 29.050 179 110 3 86 250 123 298 3.87e-16 82.8
MsG0880047670.01.T01 AT5G49030 29.050 179 110 3 86 250 123 298 4.75e-16 82.4
MsG0880047670.01.T01 AT5G16715 29.221 154 91 2 114 250 102 254 2.08e-11 67.8

Find 149 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAGTAACGATTTGTATT+TGG 0.202196 8:+89436436 None:intergenic
CATCCAATTCAGGTAGAATA+AGG 0.220352 8:+89436523 None:intergenic
TGAGTCCATTTGTAATATTC+AGG 0.231341 8:+89438157 None:intergenic
AAATTCATCAAATACGTTAA+TGG 0.239065 8:-89436844 MsG0880047670.01.T01:CDS
AATTCATCAAATACGTTAAT+GGG 0.245132 8:-89436843 MsG0880047670.01.T01:CDS
ATGTCGAGAATATAATATTT+AGG 0.252671 8:+89439821 None:intergenic
TAAAAGAAATGCAGAGAAAT+TGG 0.266806 8:-89437680 MsG0880047670.01.T01:CDS
AAAATTTAATAGTGAGATTT+CGG 0.271547 8:+89436327 None:intergenic
CCAATGGGTTGGGATGCTTT+TGG 0.275527 8:-89439598 MsG0880047670.01.T01:CDS
AGCGCCATCTTCATTCATTC+AGG 0.285885 8:-89440224 MsG0880047670.01.T01:five_prime_UTR
TGCATATGCTGACCGTCTTC+TGG 0.286400 8:-89437736 MsG0880047670.01.T01:CDS
AGGCTGAAGTTCCAGTTAAT+TGG 0.288483 8:-89437992 MsG0880047670.01.T01:CDS
GCCCCTTATTCTACCTGAAT+TGG 0.289793 8:-89436526 MsG0880047670.01.T01:CDS
ACCTATCCCTGTCATCTTCT+TGG 0.296723 8:-89436589 MsG0880047670.01.T01:CDS
CTTGGTTTGTGTTAGTTACT+TGG 0.307412 8:-89437447 MsG0880047670.01.T01:intron
GCCACTTGGGCTCAATTTCA+TGG 0.308548 8:+89439906 None:intergenic
ATGCCAAAGAAATGATAAAA+AGG 0.308947 8:+89436372 None:intergenic
GAAAAGACTGGAGTCTTTAC+TGG 0.310007 8:-89437214 MsG0880047670.01.T01:CDS
TTAATGGGGCTTGACATTAA+TGG 0.314740 8:-89436828 MsG0880047670.01.T01:CDS
TGCAGAACAATATGCTATTC+AGG 0.325539 8:-89439569 MsG0880047670.01.T01:intron
ACGGGGAAGCCATTCCGATA+TGG 0.328679 8:-89437168 MsG0880047670.01.T01:CDS
GGAATGGCTTCCCCGTTTGC+TGG 0.330812 8:+89437175 None:intergenic
ATGGGTGGCAGATTATGTTT+TGG 0.337227 8:-89437149 MsG0880047670.01.T01:CDS
TTTGTAATATTCAGGTTCTA+TGG 0.337810 8:+89438165 None:intergenic
AAGAGTGTGATGAGAGGAAT+TGG 0.338765 8:+89440131 None:intergenic
AAAGAGAGGATTGGCATATC+AGG 0.344164 8:-89438113 MsG0880047670.01.T01:intron
TATTAATCGCTTTACTTCTC+AGG 0.344763 8:-89439218 MsG0880047670.01.T01:intron
ACTTTGTTATCAAGATATAA+TGG 0.350424 8:-89436405 MsG0880047670.01.T01:CDS
TCTTTACAGTTGAAATCATT+AGG 0.364539 8:-89438220 MsG0880047670.01.T01:intron
CATTGTTGAGATGAAGCATT+TGG 0.364818 8:+89440155 None:intergenic
AGTGCAGGGCACCAATTAAC+TGG 0.365890 8:+89437981 None:intergenic
ACCAGGCCTGATACGATCTT+TGG 0.367392 8:-89437570 MsG0880047670.01.T01:CDS
GATAAAAGCATCGCTGAGTC+TGG 0.381319 8:-89436897 MsG0880047670.01.T01:CDS
TTCAGGTGAACTACAAGTTA+AGG 0.392340 8:-89436647 MsG0880047670.01.T01:intron
GTTGCTCCAAAGATCGTATC+AGG 0.398677 8:+89437564 None:intergenic
TCTGGCTAAGGCAGTGTCTT+GGG 0.399685 8:-89436469 MsG0880047670.01.T01:CDS
AAAGGATAAGCTCTGTTAAC+AGG 0.401797 8:+89439929 None:intergenic
TATCAAGATATAATGGCAAT+TGG 0.408920 8:-89436398 MsG0880047670.01.T01:CDS
AGGAACAGGGGAGCCTCCTC+TGG 0.409388 8:-89436487 MsG0880047670.01.T01:CDS
ATCCAATTCAGGTAGAATAA+GGG 0.409942 8:+89436524 None:intergenic
CTCTGGCTAAGGCAGTGTCT+TGG 0.410040 8:-89436470 MsG0880047670.01.T01:CDS
ACATAATCTGCCACCCATAT+CGG 0.411350 8:+89437154 None:intergenic
GCCAACACCGTGCCAAGTGC+AGG 0.412233 8:+89437966 None:intergenic
TGGTCACAGTGGTGAGCTTT+GGG 0.417119 8:+89439242 None:intergenic
AGAAGTAAAGCGATTAATAT+TGG 0.417234 8:+89439222 None:intergenic
GGCATTGGCACAAATGTTGA+TGG 0.417295 8:-89436354 MsG0880047670.01.T01:CDS
CAGCTCTAAAAGTCATTGAT+TGG 0.417592 8:-89436788 MsG0880047670.01.T01:CDS
TTGGTCACAGTGGTGAGCTT+TGG 0.422695 8:+89439241 None:intergenic
AATATGACATTCCTATTCGC+TGG 0.429756 8:-89436935 MsG0880047670.01.T01:CDS
AGGAGGCTCCCCTGTTCCTG+TGG 0.444311 8:+89436491 None:intergenic
GCCAATGAGGAGGTTATTGA+TGG 0.454727 8:-89437945 MsG0880047670.01.T01:CDS
AATATTACAAATGGACTCAA+TGG 0.456678 8:-89438153 MsG0880047670.01.T01:CDS
TACTGTGGCAGTTATGGAAC+AGG 0.457408 8:-89437011 MsG0880047670.01.T01:intron
AAATGAAAGAACAGAGAAAG+AGG 0.458163 8:+89440194 None:intergenic
CATTAGGATTCTCATATGAC+TGG 0.458393 8:-89438204 MsG0880047670.01.T01:CDS
TCAATTGAAAACCTAGGGTA+AGG 0.462945 8:+89439794 None:intergenic
GTTAATTGGTGCCCTGCACT+TGG 0.464628 8:-89437978 MsG0880047670.01.T01:CDS
CGGGGAAGCCATTCCGATAT+GGG 0.465129 8:-89437167 MsG0880047670.01.T01:CDS
TTGTGTTAGTTACTTGGTTG+TGG 0.466487 8:-89437441 MsG0880047670.01.T01:intron
GAGGTCAGAAGGGGCTGAGT+TGG 0.470151 8:-89437652 MsG0880047670.01.T01:CDS
TCAGGTGAACTACAAGTTAA+GGG 0.473371 8:-89436646 MsG0880047670.01.T01:intron
CAGTGGTGAGACTGTCCCTC+TGG 0.476437 8:-89436562 MsG0880047670.01.T01:CDS
TAGAACCTGAATATTACAAA+TGG 0.477618 8:-89438162 MsG0880047670.01.T01:CDS
TGAATAGCATATTGTTCTGC+AGG 0.480651 8:+89439571 None:intergenic
GAAGATGTTGTTCTTCTGAA+TGG 0.481534 8:+89440046 None:intergenic
GGCATTACAACCCAGCGAAT+AGG 0.482519 8:+89436924 None:intergenic
GATGTATCGATATCATCATC+TGG 0.484767 8:+89439848 None:intergenic
GGAAATCAATGATGAGATCA+AGG 0.489856 8:+89437406 None:intergenic
TTACACTTTCCGGCCAGTCC+AGG 0.489888 8:+89437700 None:intergenic
TTGAGCATCCATTGCCTCAT+CGG 0.496126 8:+89437765 None:intergenic
CTTCTGAATGGTGTGGGAAA+AGG 0.496517 8:+89440058 None:intergenic
AGCTCTAAAAGTCATTGATT+GGG 0.502134 8:-89436787 MsG0880047670.01.T01:CDS
ACCATCAATAACCTCCTCAT+TGG 0.502814 8:+89437944 None:intergenic
TCGACATGTTCCCTTACCCT+AGG 0.504663 8:-89439805 MsG0880047670.01.T01:intron
AATTGGATAGGGAGGTCAGA+AGG 0.506229 8:-89437663 MsG0880047670.01.T01:CDS
TTATGGAACAGGAGCAATCA+TGG 0.512936 8:-89437000 MsG0880047670.01.T01:CDS
ATATAATGTGTTGCATCCAA+TGG 0.513319 8:-89439614 MsG0880047670.01.T01:CDS
AGGAGCAATCATGGCTGTGC+CGG 0.516087 8:-89436991 MsG0880047670.01.T01:CDS
CTGTCATCCAAGAAGATGAC+AGG 0.517153 8:+89436582 None:intergenic
GAAATGCAGAGAAATTGGAT+AGG 0.517702 8:-89437675 MsG0880047670.01.T01:CDS
GAGGAGAAGAGTGTGATGAG+AGG 0.524661 8:+89440125 None:intergenic
AGGGGAGCCTCCTCTGGCTA+AGG 0.527138 8:-89436481 MsG0880047670.01.T01:CDS
TTTAGATGACCTGGACTGGC+CGG 0.529372 8:-89437709 MsG0880047670.01.T01:CDS
ATATGACATTCCTATTCGCT+GGG 0.530687 8:-89436934 MsG0880047670.01.T01:CDS
TCTGAAGCTCCGTCCTCTCA+AGG 0.531320 8:+89437239 None:intergenic
AAGTGGAAATGGAAAGAGAA+AGG 0.532402 8:-89436757 MsG0880047670.01.T01:intron
AAATGATAAACTGAACGAAA+CGG 0.534449 8:-89439966 MsG0880047670.01.T01:CDS
ATTGGATAGGGAGGTCAGAA+GGG 0.535801 8:-89437662 MsG0880047670.01.T01:CDS
TCCAAAGATCGTATCAGGCC+TGG 0.540002 8:+89437569 None:intergenic
CCCTGCACTTGGCACGGTGT+TGG 0.541153 8:-89437967 MsG0880047670.01.T01:CDS
AAATGCAGAGAAATTGGATA+GGG 0.542886 8:-89437674 MsG0880047670.01.T01:CDS
CCAAGCAGCCGATGAGGCAA+TGG 0.543560 8:-89437773 MsG0880047670.01.T01:intron
TTGGGCTCAATTTCATGGAA+AGG 0.544166 8:+89439911 None:intergenic
TGTGTTGCATCCAATGGGTT+GGG 0.546174 8:-89439608 MsG0880047670.01.T01:CDS
CATTCTTGATGGTGATGGAA+AGG 0.547462 8:-89437622 MsG0880047670.01.T01:CDS
CCAAAAGCATCCCAACCCAT+TGG 0.550219 8:+89439598 None:intergenic
GGCAATTCAGTCTCATCCAG+AGG 0.550404 8:+89436546 None:intergenic
TCCAATTCAGGTAGAATAAG+GGG 0.553936 8:+89436525 None:intergenic
GAGCTTCAGAAGGAAAAGAC+TGG 0.554438 8:-89437226 MsG0880047670.01.T01:CDS
GGAGGCTCCCCTGTTCCTGT+GGG 0.555278 8:+89436492 None:intergenic
TCTGGAGGATTTAGATGACC+TGG 0.557585 8:-89437718 MsG0880047670.01.T01:CDS
TTACATGTTGGACATCCACT+TGG 0.560224 8:-89439682 MsG0880047670.01.T01:CDS
ACGTCCTGAATGAATGAAGA+TGG 0.562099 8:+89440220 None:intergenic
TTTGCAATAATGCCTTCACC+TGG 0.562303 8:+89436864 None:intergenic
AAAGAGTGACCTTGAGAGGA+CGG 0.567367 8:-89437248 MsG0880047670.01.T01:CDS
TACATGCTTGCTCTGAGCAG+TGG 0.568657 8:+89437385 None:intergenic
CTGCGACTGATATTCTAGCT+AGG 0.571493 8:-89439654 MsG0880047670.01.T01:CDS
TGCAGAGAAATTGGATAGGG+AGG 0.575908 8:-89437671 MsG0880047670.01.T01:CDS
CACGGTGTTGGCCAATGAGG+AGG 0.576162 8:-89437955 MsG0880047670.01.T01:CDS
TATAATGTGTTGCATCCAAT+GGG 0.579724 8:-89439613 MsG0880047670.01.T01:CDS
GATGAGATCAAGGAATGCTC+TGG 0.586275 8:+89437416 None:intergenic
TACAACTGTGACTGTGACTG+CGG 0.591231 8:+89440008 None:intergenic
TCCAAGAAGATGACAGGGAT+AGG 0.591349 8:+89436588 None:intergenic
TCCATGAAATTGAGCCCAAG+TGG 0.593347 8:-89439907 MsG0880047670.01.T01:CDS
TGAGAGGACGGAGCTTCAGA+AGG 0.595123 8:-89437236 MsG0880047670.01.T01:CDS
ATTCATCAAATACGTTAATG+GGG 0.597745 8:-89436842 MsG0880047670.01.T01:CDS
GCTAGGTTTAAACGAATGCA+AGG 0.598535 8:-89439637 MsG0880047670.01.T01:CDS
CCAACACCGTGCCAAGTGCA+GGG 0.600748 8:+89437967 None:intergenic
ATCTGCCACCCATATCGGAA+TGG 0.601307 8:+89437159 None:intergenic
AGGATTTAGATGACCTGGAC+TGG 0.601385 8:-89437713 MsG0880047670.01.T01:CDS
AAGCATCGCTGAGTCTGGAA+AGG 0.601785 8:-89436892 MsG0880047670.01.T01:CDS
CATCTAAATCCTCCAGAAGA+CGG 0.606104 8:+89437724 None:intergenic
TTGGTGCCCTGCACTTGGCA+CGG 0.606496 8:-89437973 MsG0880047670.01.T01:CDS
TAATCGCGTGAATCATGTGC+CGG 0.609800 8:+89436972 None:intergenic
ATGTGTTGCATCCAATGGGT+TGG 0.609954 8:-89439609 MsG0880047670.01.T01:CDS
TGAACTACAAGTTAAGGGAC+TGG 0.610831 8:-89436641 MsG0880047670.01.T01:CDS
GTTGTTCTTCTGAATGGTGT+GGG 0.617477 8:+89440052 None:intergenic
CAGTTGTAGAATCAGAAACT+CGG 0.619031 8:-89439993 MsG0880047670.01.T01:CDS
TTTGCTCGGCAGCGTTACTG+GGG 0.620075 8:-89436615 MsG0880047670.01.T01:CDS
TGGCACGGTGTTGGCCAATG+AGG 0.621507 8:-89437958 MsG0880047670.01.T01:CDS
TTGGATAGGGAGGTCAGAAG+GGG 0.621938 8:-89437661 MsG0880047670.01.T01:CDS
ATTAGGATTCTCATATGACT+GGG 0.624736 8:-89438203 MsG0880047670.01.T01:CDS
GACACTGCCTTAGCCAGAGG+AGG 0.630133 8:+89436474 None:intergenic
CAATTGAAAACCTAGGGTAA+GGG 0.631350 8:+89439795 None:intergenic
AGATTACTGTGTATACTACC+AGG 0.631354 8:-89437587 MsG0880047670.01.T01:CDS
GTCATCTTCTTGGATGACAG+TGG 0.636933 8:-89436579 MsG0880047670.01.T01:CDS
ATATGCTGACCGTCTTCTGG+AGG 0.638569 8:-89437733 MsG0880047670.01.T01:CDS
TGTTGTTCTTCTGAATGGTG+TGG 0.639053 8:+89440051 None:intergenic
GCAATTCAGTCTCATCCAGA+GGG 0.651734 8:+89436547 None:intergenic
CAAGACACTGCCTTAGCCAG+AGG 0.653249 8:+89436471 None:intergenic
TTATTGCCAAGCAGCCGATG+AGG 0.661121 8:-89437779 MsG0880047670.01.T01:intron
AGTGGAGCTGGGTTACATGT+TGG 0.662831 8:-89439694 MsG0880047670.01.T01:CDS
TCAGTCGCAGTGTATCCAAG+TGG 0.670569 8:+89439667 None:intergenic
ATTGATGGTGTGAGTGAACG+CGG 0.670993 8:-89437930 MsG0880047670.01.T01:CDS
GGAAGCCATTCCGATATGGG+TGG 0.681101 8:-89437164 MsG0880047670.01.T01:CDS
GAATGGTGTGGGAAAAGGAA+CGG 0.696441 8:+89440063 None:intergenic
TGTCATCCAAGAAGATGACA+GGG 0.699523 8:+89436583 None:intergenic
GCGATTAATATTGGTCACAG+TGG 0.700227 8:+89439231 None:intergenic
GATGGTGTGAGTGAACGCGG+TGG 0.812165 8:-89437927 MsG0880047670.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATACAATAATTAAATACA+AGG + Chr8:89437417-89437436 None:intergenic 10.0%
!! TCTAAATAATTATATTGAAA+AGG - Chr8:89438024-89438043 MsG0880047670.01.T01:intron 10.0%
!! TAAAATCCTTCTAATAAATT+AGG + Chr8:89439216-89439235 None:intergenic 15.0%
!! TAGTAATTGAATACTATAAT+CGG + Chr8:89437136-89437155 None:intergenic 15.0%
!! TTTGAACTATAAAAACAATA+AGG - Chr8:89438120-89438139 MsG0880047670.01.T01:CDS 15.0%
!!! ATAATTTCCATCTTTTTTAT+TGG - Chr8:89437269-89437288 MsG0880047670.01.T01:CDS 15.0%
!!! ATTTTCTATCTAAATATACA+GGG + Chr8:89437877-89437896 None:intergenic 15.0%
!!! TTCTTTCAATTTACTTTTTT+GGG - Chr8:89438696-89438715 MsG0880047670.01.T01:intron 15.0%
!!! TTTATTAGAAGGATTTTAAT+CGG - Chr8:89439218-89439237 MsG0880047670.01.T01:intron 15.0%
!!! TTTCTTTCAATTTACTTTTT+TGG - Chr8:89438695-89438714 MsG0880047670.01.T01:intron 15.0%
!! AAAATGAAAATATGAGTTTC+AGG - Chr8:89437892-89437911 MsG0880047670.01.T01:intron 20.0%
!! AAATTCATCAAATACGTTAA+TGG - Chr8:89439713-89439732 MsG0880047670.01.T01:intron 20.0%
!! AATTCATCAAATACGTTAAT+GGG - Chr8:89439714-89439733 MsG0880047670.01.T01:intron 20.0%
!! ACATCATATAAAAAAAACTC+AGG - Chr8:89438545-89438564 MsG0880047670.01.T01:intron 20.0%
!! ATGTCGAGAATATAATATTT+AGG + Chr8:89436739-89436758 None:intergenic 20.0%
!! CAGCAAATGTTAATAATTAT+AGG + Chr8:89437455-89437474 None:intergenic 20.0%
!! TGAAAATTTGATAAAGTTGA+AGG + Chr8:89437795-89437814 None:intergenic 20.0%
!!! AAAAGAGAAATTCCTTTTAT+GGG - Chr8:89438299-89438318 MsG0880047670.01.T01:intron 20.0%
!!! AATAAGCTTGTTCATTTTAT+TGG - Chr8:89439840-89439859 MsG0880047670.01.T01:CDS 20.0%
!!! ACTTTGTTATCAAGATATAA+TGG - Chr8:89440152-89440171 MsG0880047670.01.T01:CDS 20.0%
!!! CATTTTCTATCTAAATATAC+AGG + Chr8:89437878-89437897 None:intergenic 20.0%
!!! CTTATGGTTTTTTTTTTGAA+TGG - Chr8:89438729-89438748 MsG0880047670.01.T01:intron 20.0%
!!! TTTTCTATCTAAATATACAG+GGG + Chr8:89437876-89437895 None:intergenic 20.0%
!!! TTTTTTTCTTTCTGAACTTT+TGG - Chr8:89437820-89437839 MsG0880047670.01.T01:intron 20.0%
! AAAGAGTAAAGATCTTCAAA+TGG + Chr8:89437531-89437550 None:intergenic 25.0%
! AAATGATAAACTGAACGAAA+CGG - Chr8:89436591-89436610 MsG0880047670.01.T01:CDS 25.0%
! AGAAGTAAAGCGATTAATAT+TGG + Chr8:89437338-89437357 None:intergenic 25.0%
! ATCAACTAGTCAATATGATT+TGG - Chr8:89437615-89437634 MsG0880047670.01.T01:CDS 25.0%
! ATCTTCAAATGGATCAAAAT+TGG + Chr8:89437520-89437539 None:intergenic 25.0%
! ATGAAACCAGAATATAATTG+TGG - Chr8:89439522-89439541 MsG0880047670.01.T01:intron 25.0%
! ATGCCAAAGAAATGATAAAA+AGG + Chr8:89440188-89440207 None:intergenic 25.0%
! ATTCATCAAATACGTTAATG+GGG - Chr8:89439715-89439734 MsG0880047670.01.T01:intron 25.0%
! ATTTGAAGATCTTTACTCTT+TGG - Chr8:89437530-89437549 MsG0880047670.01.T01:intron 25.0%
! GAATAGTTAAGTAGTTAGTT+AGG - Chr8:89437577-89437596 MsG0880047670.01.T01:CDS 25.0%
! GAATTGTTAATTCAAGTAAC+TGG - Chr8:89438215-89438234 MsG0880047670.01.T01:intron 25.0%
! TAAAAGAAATGCAGAGAAAT+TGG - Chr8:89438877-89438896 MsG0880047670.01.T01:intron 25.0%
! TAACTTCAATTGAAAACCTA+GGG + Chr8:89436771-89436790 None:intergenic 25.0%
! TAGAACCTGAATATTACAAA+TGG - Chr8:89438395-89438414 MsG0880047670.01.T01:intron 25.0%
! TATCAAGATATAATGGCAAT+TGG - Chr8:89440159-89440178 MsG0880047670.01.T01:exon 25.0%
! TCTTCAAATGGATCAAAATT+GGG + Chr8:89437519-89437538 None:intergenic 25.0%
! TCTTTACAGTTGAAATCATT+AGG - Chr8:89438337-89438356 MsG0880047670.01.T01:intron 25.0%
!! AATATTACAAATGGACTCAA+TGG - Chr8:89438404-89438423 MsG0880047670.01.T01:intron 25.0%
!! ATGCCTTTTTATCATTTCTT+TGG - Chr8:89440182-89440201 MsG0880047670.01.T01:five_prime_UTR 25.0%
!! GAAAAGAGAAATTCCTTTTA+TGG - Chr8:89438298-89438317 MsG0880047670.01.T01:intron 25.0%
!! GCAATTTGATTTCTCTAATT+TGG + Chr8:89437998-89438017 None:intergenic 25.0%
!! GTTTTTATAGTTCAAAGCAT+AGG + Chr8:89438116-89438135 None:intergenic 25.0%
!! TAAAAGGAATTTCTCTTTTC+AGG + Chr8:89438298-89438317 None:intergenic 25.0%
!! TTAGATTGGTGAATTTTAAG+TGG + Chr8:89437735-89437754 None:intergenic 25.0%
!! TTTGTAATATTCAGGTTCTA+TGG + Chr8:89438395-89438414 None:intergenic 25.0%
!! TTTTATCATTTCTTTGGCAT+TGG - Chr8:89440188-89440207 MsG0880047670.01.T01:five_prime_UTR 25.0%
!!! ATCGAAATTTGCTTTTAGAT+TGG + Chr8:89437749-89437768 None:intergenic 25.0%
!!! TATTGGAACGTTGTTTTTTA+TGG - Chr8:89439857-89439876 MsG0880047670.01.T01:CDS 25.0%
!!! TTTCAATTTACTTTTTTGGG+TGG - Chr8:89438699-89438718 MsG0880047670.01.T01:intron 25.0%
AAAACATGAAGGATTGATTG+AGG + Chr8:89437642-89437661 None:intergenic 30.0%
AAATACATTGTTCTTCCTTC+AGG - Chr8:89439893-89439912 MsG0880047670.01.T01:CDS 30.0%
AAATGAAAGAACAGAGAAAG+AGG + Chr8:89436366-89436385 None:intergenic 30.0%
AAATGCAGAGAAATTGGATA+GGG - Chr8:89438883-89438902 MsG0880047670.01.T01:intron 30.0%
ATATAATGTGTTGCATCCAA+TGG - Chr8:89436943-89436962 MsG0880047670.01.T01:CDS 30.0%
ATCCAATTCAGGTAGAATAA+GGG + Chr8:89440036-89440055 None:intergenic 30.0%
ATTAGGATTCTCATATGACT+GGG - Chr8:89438354-89438373 MsG0880047670.01.T01:intron 30.0%
ATTAGTAATGCACCCATAAA+AGG + Chr8:89438314-89438333 None:intergenic 30.0%
CACAAAGCCAATAAAAAAGA+TGG + Chr8:89437279-89437298 None:intergenic 30.0%
CAGTAACCACAATTATATTC+TGG + Chr8:89439531-89439550 None:intergenic 30.0%
CCATAAGAACATCAATACTT+AGG + Chr8:89438517-89438536 None:intergenic 30.0%
CTGTTGCCTAATTTATTAGA+AGG - Chr8:89439207-89439226 MsG0880047670.01.T01:intron 30.0%
GAACAAACACAAAAACATGA+AGG + Chr8:89437653-89437672 None:intergenic 30.0%
GAATATAATTGTGGTTACTG+TGG - Chr8:89439531-89439550 MsG0880047670.01.T01:intron 30.0%
GCAAAGTAACGATTTGTATT+TGG + Chr8:89440124-89440143 None:intergenic 30.0%
GTAACTTCAATTGAAAACCT+AGG + Chr8:89436772-89436791 None:intergenic 30.0%
TAAATACATATCAGAGCCAT+GGG + Chr8:89438275-89438294 None:intergenic 30.0%
TATAATGTGTTGCATCCAAT+GGG - Chr8:89436944-89436963 MsG0880047670.01.T01:CDS 30.0%
TATGCAAAAAATCCAGCAAA+CGG - Chr8:89439370-89439389 MsG0880047670.01.T01:intron 30.0%
TATTAATCGCTTTACTTCTC+AGG - Chr8:89437339-89437358 MsG0880047670.01.T01:intron 30.0%
TCATCAATTTCCTATTTGCT+TGG - Chr8:89439092-89439111 MsG0880047670.01.T01:intron 30.0%
TGAGTCCATTTGTAATATTC+AGG + Chr8:89438403-89438422 None:intergenic 30.0%
TTGCTAAATATTCCATGACA+TGG - Chr8:89439479-89439498 MsG0880047670.01.T01:intron 30.0%
! GGATCTAAATAATTGAGTTG+TGG - Chr8:89438045-89438064 MsG0880047670.01.T01:intron 30.0%
! TGCATTTCTTTTACACTTTC+CGG + Chr8:89438870-89438889 None:intergenic 30.0%
! TTGGATTTTTGCATTCTTGA+TGG - Chr8:89438924-89438943 MsG0880047670.01.T01:intron 30.0%
!! AGCTCTAAAAGTCATTGATT+GGG - Chr8:89439770-89439789 MsG0880047670.01.T01:intron 30.0%
!! ATTATCCATTTTTGTTGCAG+TGG - Chr8:89436845-89436864 MsG0880047670.01.T01:CDS 30.0%
!! CATATTGACTAGTTGATAGA+GGG + Chr8:89437612-89437631 None:intergenic 30.0%
!! CCTAAGTATTGATGTTCTTA+TGG - Chr8:89438514-89438533 MsG0880047670.01.T01:intron 30.0%
!! TCATATTGACTAGTTGATAG+AGG + Chr8:89437613-89437632 None:intergenic 30.0%
!! TTCTTAGGGATTTTAATCTC+AGG - Chr8:89439258-89439277 MsG0880047670.01.T01:intron 30.0%
!! TTTCTACAGCTTTTAAAGAG+AGG - Chr8:89438430-89438449 MsG0880047670.01.T01:intron 30.0%
AAAGGATAAGCTCTGTTAAC+AGG + Chr8:89436631-89436650 None:intergenic 35.0%
AAGTGGAAATGGAAAGAGAA+AGG - Chr8:89439800-89439819 MsG0880047670.01.T01:intron 35.0%
AATATGACATTCCTATTCGC+TGG - Chr8:89439622-89439641 MsG0880047670.01.T01:CDS 35.0%
AGATTACTGTGTATACTACC+AGG - Chr8:89438970-89438989 MsG0880047670.01.T01:intron 35.0%
ATATGACATTCCTATTCGCT+GGG - Chr8:89439623-89439642 MsG0880047670.01.T01:CDS 35.0%
ATGCAAAAAATCCAGCAAAC+GGG - Chr8:89439371-89439390 MsG0880047670.01.T01:intron 35.0%
ATTGATTGGGCAGAAAAAAG+TGG - Chr8:89439783-89439802 MsG0880047670.01.T01:intron 35.0%
CAATTGAAAACCTAGGGTAA+GGG + Chr8:89436765-89436784 None:intergenic 35.0%
CAGTATACCTTTCTTACTAC+AGG + Chr8:89438660-89438679 None:intergenic 35.0%
CAGTTGTAGAATCAGAAACT+CGG - Chr8:89436564-89436583 MsG0880047670.01.T01:CDS 35.0%
CATCCAATTCAGGTAGAATA+AGG + Chr8:89440037-89440056 None:intergenic 35.0%
CATTAGGATTCTCATATGAC+TGG - Chr8:89438353-89438372 MsG0880047670.01.T01:intron 35.0%
CTAACACAAACCAAGCAAAT+AGG + Chr8:89439105-89439124 None:intergenic 35.0%
GAAATGCAGAGAAATTGGAT+AGG - Chr8:89438882-89438901 MsG0880047670.01.T01:intron 35.0%
GAAGATGTTGTTCTTCTGAA+TGG + Chr8:89436514-89436533 None:intergenic 35.0%
GGAAATCAATGATGAGATCA+AGG + Chr8:89439154-89439173 None:intergenic 35.0%
GGAGAAAAATCATCCAATTC+AGG + Chr8:89440047-89440066 None:intergenic 35.0%
GTAAATACATATCAGAGCCA+TGG + Chr8:89438276-89438295 None:intergenic 35.0%
TCAATTGAAAACCTAGGGTA+AGG + Chr8:89436766-89436785 None:intergenic 35.0%
TCAGGTGAACTACAAGTTAA+GGG - Chr8:89439911-89439930 MsG0880047670.01.T01:CDS 35.0%
TCCAATTCAGGTAGAATAAG+GGG + Chr8:89440035-89440054 None:intergenic 35.0%
TGAATAGCATATTGTTCTGC+AGG + Chr8:89436989-89437008 None:intergenic 35.0%
TGCAGAACAATATGCTATTC+AGG - Chr8:89436988-89437007 MsG0880047670.01.T01:CDS 35.0%
TTAATGGGGCTTGACATTAA+TGG - Chr8:89439729-89439748 MsG0880047670.01.T01:intron 35.0%
TTCAGGTGAACTACAAGTTA+AGG - Chr8:89439910-89439929 MsG0880047670.01.T01:CDS 35.0%
TTGTGTTAGTTACTTGGTTG+TGG - Chr8:89439116-89439135 MsG0880047670.01.T01:intron 35.0%
! AAATAATTGAGTTGTGGCGT+TGG - Chr8:89438051-89438070 MsG0880047670.01.T01:intron 35.0%
! ACTAGCTTGAAAAAAGCCAA+GGG - Chr8:89437954-89437973 MsG0880047670.01.T01:CDS 35.0%
! CATTGTTGAGATGAAGCATT+TGG + Chr8:89436405-89436424 None:intergenic 35.0%
! GATGTATCGATATCATCATC+TGG + Chr8:89436712-89436731 None:intergenic 35.0%
! TCAGGTAAACTGGTAATGAA+AGG - Chr8:89437357-89437376 MsG0880047670.01.T01:intron 35.0%
! TTTGGGTGGTTTTTCTCTTA+TGG - Chr8:89438713-89438732 MsG0880047670.01.T01:intron 35.0%
!! AAGGATTTTAATCGGAGACA+AGG - Chr8:89439226-89439245 MsG0880047670.01.T01:CDS 35.0%
!! ACAGCTTTTAAAGAGAGGAT+TGG - Chr8:89438435-89438454 MsG0880047670.01.T01:intron 35.0%
!! CAGCTCTAAAAGTCATTGAT+TGG - Chr8:89439769-89439788 MsG0880047670.01.T01:intron 35.0%
!! CTTGGTTTGTGTTAGTTACT+TGG - Chr8:89439110-89439129 MsG0880047670.01.T01:intron 35.0%
!! TTAACTTGTAGTTCACCTGA+AGG + Chr8:89439911-89439930 None:intergenic 35.0%
!!! TTTTGCATTCTTGATGGTGA+TGG - Chr8:89438930-89438949 MsG0880047670.01.T01:intron 35.0%
ACAAGGAGATGGTGATTCTT+AGG - Chr8:89439243-89439262 MsG0880047670.01.T01:CDS 40.0%
ACATAATCTGCCACCCATAT+CGG + Chr8:89439406-89439425 None:intergenic 40.0%
ACCATCAATAACCTCCTCAT+TGG + Chr8:89438616-89438635 None:intergenic 40.0%
ACGTCCTGAATGAATGAAGA+TGG + Chr8:89436340-89436359 None:intergenic 40.0%
AGGCTGAAGTTCCAGTTAAT+TGG - Chr8:89438565-89438584 MsG0880047670.01.T01:intron 40.0%
ATTCCATGACATGGTCAATG+TGG - Chr8:89439488-89439507 MsG0880047670.01.T01:intron 40.0%
ATTGAAGAAGACGTGTACAC+TGG - Chr8:89437065-89437084 MsG0880047670.01.T01:intron 40.0%
CAAAAAAGAGTGACCTTGAG+AGG - Chr8:89439305-89439324 MsG0880047670.01.T01:intron 40.0%
CAAGGAGATGGTGATTCTTA+GGG - Chr8:89439244-89439263 MsG0880047670.01.T01:CDS 40.0%
CATCTAAATCCTCCAGAAGA+CGG + Chr8:89438836-89438855 None:intergenic 40.0%
CTACATAGCATGTCAGTGAT+AGG + Chr8:89437031-89437050 None:intergenic 40.0%
GAAAAGACTGGAGTCTTTAC+TGG - Chr8:89439343-89439362 MsG0880047670.01.T01:intron 40.0%
GACACATGTCAGATAGTGTA+TGG - Chr8:89437087-89437106 MsG0880047670.01.T01:intron 40.0%
GCGATTAATATTGGTCACAG+TGG + Chr8:89437329-89437348 None:intergenic 40.0%
GCTAGGTTTAAACGAATGCA+AGG - Chr8:89436920-89436939 MsG0880047670.01.T01:CDS 40.0%
GCTTTACTTCTCAGGTAAAC+TGG - Chr8:89437347-89437366 MsG0880047670.01.T01:intron 40.0%
GTTCATTACCGGCACAATAT+AGG + Chr8:89437489-89437508 None:intergenic 40.0%
GTTGTTCTTCTGAATGGTGT+GGG + Chr8:89436508-89436527 None:intergenic 40.0%
TAAGTGAGATTTCTGTCCCT+TGG + Chr8:89437973-89437992 None:intergenic 40.0%
TGAACTACAAGTTAAGGGAC+TGG - Chr8:89439916-89439935 MsG0880047670.01.T01:CDS 40.0%
TGCAAAAAATCCAGCAAACG+GGG - Chr8:89439372-89439391 MsG0880047670.01.T01:intron 40.0%
TGGGCAGAAAAAAGTGGAAA+TGG - Chr8:89439789-89439808 MsG0880047670.01.T01:intron 40.0%
TGGTCATCCTGTAGTAAGAA+AGG - Chr8:89438650-89438669 MsG0880047670.01.T01:intron 40.0%
TGTCATCCAAGAAGATGACA+GGG + Chr8:89439977-89439996 None:intergenic 40.0%
TGTTGTTCTTCTGAATGGTG+TGG + Chr8:89436509-89436528 None:intergenic 40.0%
TTACATGTTGGACATCCACT+TGG - Chr8:89436875-89436894 MsG0880047670.01.T01:CDS 40.0%
TTATGGAACAGGAGCAATCA+TGG - Chr8:89439557-89439576 MsG0880047670.01.T01:intron 40.0%
TTGGGCTCAATTTCATGGAA+AGG + Chr8:89436649-89436668 None:intergenic 40.0%
TTTAATCGGAGACAAGGAGA+TGG - Chr8:89439232-89439251 MsG0880047670.01.T01:CDS 40.0%
TTTGCAATAATGCCTTCACC+TGG + Chr8:89439696-89439715 None:intergenic 40.0%
! AAAGAGAGGATTGGCATATC+AGG - Chr8:89438444-89438463 MsG0880047670.01.T01:intron 40.0%
! AAGAGTGTGATGAGAGGAAT+TGG + Chr8:89436429-89436448 None:intergenic 40.0%
! ATGGGTGGCAGATTATGTTT+TGG - Chr8:89439408-89439427 MsG0880047670.01.T01:intron 40.0%
! ATTTGCTGCCTATATTGTGC+CGG - Chr8:89437478-89437497 MsG0880047670.01.T01:intron 40.0%
! ATTTTTCTCCCACAGGAACA+GGG - Chr8:89440057-89440076 MsG0880047670.01.T01:CDS 40.0%
! ATTTTTGTTGCAGTGGAGCT+GGG - Chr8:89436852-89436871 MsG0880047670.01.T01:CDS 40.0%
! GGTAGAAGAATATTGACTGC+AGG - Chr8:89437913-89437932 MsG0880047670.01.T01:intron 40.0%
! TCAGCGATGCTTTTATCATC+TGG + Chr8:89439657-89439676 None:intergenic 40.0%
! TGGGTGGCAGATTATGTTTT+GGG - Chr8:89439409-89439428 MsG0880047670.01.T01:intron 40.0%
! TTGGATGATTTTTCTCCCAC+AGG - Chr8:89440050-89440069 MsG0880047670.01.T01:CDS 40.0%
!! CATTCTTGATGGTGATGGAA+AGG - Chr8:89438935-89438954 MsG0880047670.01.T01:intron 40.0%
!! GACTAGCTTGAAAAAAGCCA+AGG - Chr8:89437953-89437972 MsG0880047670.01.T01:CDS 40.0%
!! TATTGGCTTTGTGTTCAGAC+AGG - Chr8:89437286-89437305 MsG0880047670.01.T01:intron 40.0%
!!! CTCAAGGTCACTCTTTTTTG+AGG + Chr8:89439305-89439324 None:intergenic 40.0%
!!! GGCTTTTTTCAAGCTAGTCA+AGG + Chr8:89437952-89437971 None:intergenic 40.0%
AAAGAGTGACCTTGAGAGGA+CGG - Chr8:89439309-89439328 MsG0880047670.01.T01:intron 45.0%
AAATATACAGGGGTCTGCTC+TGG + Chr8:89437866-89437885 None:intergenic 45.0%
AATTGGATAGGGAGGTCAGA+AGG - Chr8:89438894-89438913 MsG0880047670.01.T01:intron 45.0%
ACCTATCCCTGTCATCTTCT+TGG - Chr8:89439968-89439987 MsG0880047670.01.T01:CDS 45.0%
AGCATAGGCTTACAGCTTAC+TGG + Chr8:89438101-89438120 None:intergenic 45.0%
AGCGCCATCTTCATTCATTC+AGG - Chr8:89436333-89436352 MsG0880047670.01.T01:CDS 45.0%
AGGATTTAGATGACCTGGAC+TGG - Chr8:89438844-89438863 MsG0880047670.01.T01:intron 45.0%
ATGGGAAGCAAATCAAGTGG+AGG + Chr8:89438257-89438276 None:intergenic 45.0%
ATGTGTTGCATCCAATGGGT+TGG - Chr8:89436948-89436967 MsG0880047670.01.T01:CDS 45.0%
ATTGACTGCAGGACCAAGTT+TGG - Chr8:89437924-89437943 MsG0880047670.01.T01:CDS 45.0%
ATTGGATAGGGAGGTCAGAA+GGG - Chr8:89438895-89438914 MsG0880047670.01.T01:intron 45.0%
CAGCTCCACTGCAACAAAAA+TGG + Chr8:89436853-89436872 None:intergenic 45.0%
CTGTCATCCAAGAAGATGAC+AGG + Chr8:89439978-89439997 None:intergenic 45.0%
CTTCTGAATGGTGTGGGAAA+AGG + Chr8:89436502-89436521 None:intergenic 45.0%
GAATGGTGTGGGAAAAGGAA+CGG + Chr8:89436497-89436516 None:intergenic 45.0%
GAGCTTCAGAAGGAAAAGAC+TGG - Chr8:89439331-89439350 MsG0880047670.01.T01:intron 45.0%
GATGAGATCAAGGAATGCTC+TGG + Chr8:89439144-89439163 None:intergenic 45.0%
GCAATTCAGTCTCATCCAGA+GGG + Chr8:89440013-89440032 None:intergenic 45.0%
GCCAATGAGGAGGTTATTGA+TGG - Chr8:89438612-89438631 MsG0880047670.01.T01:intron 45.0%
GCCCCTTATTCTACCTGAAT+TGG - Chr8:89440031-89440050 MsG0880047670.01.T01:CDS 45.0%
GCTAGTCAAGGAACCAAACT+TGG + Chr8:89437940-89437959 None:intergenic 45.0%
GTCATCTTCTTGGATGACAG+TGG - Chr8:89439978-89439997 MsG0880047670.01.T01:CDS 45.0%
GTTGCTCCAAAGATCGTATC+AGG + Chr8:89438996-89439015 None:intergenic 45.0%
TAATCGCGTGAATCATGTGC+CGG + Chr8:89439588-89439607 None:intergenic 45.0%
TACAACTGTGACTGTGACTG+CGG + Chr8:89436552-89436571 None:intergenic 45.0%
TACTGTGGCAGTTATGGAAC+AGG - Chr8:89439546-89439565 MsG0880047670.01.T01:intron 45.0%
TCACCACATTGACCATGTCA+TGG + Chr8:89439494-89439513 None:intergenic 45.0%
TCCAAGAAGATGACAGGGAT+AGG + Chr8:89439972-89439991 None:intergenic 45.0%
TCCATGAAATTGAGCCCAAG+TGG - Chr8:89436650-89436669 MsG0880047670.01.T01:intron 45.0%
TCTGGAGGATTTAGATGACC+TGG - Chr8:89438839-89438858 MsG0880047670.01.T01:intron 45.0%
TGCAGAGAAATTGGATAGGG+AGG - Chr8:89438886-89438905 MsG0880047670.01.T01:intron 45.0%
TGGGCGCATAAGTTCATTAC+CGG + Chr8:89437500-89437519 None:intergenic 45.0%
TGTGGTTACTGTGGCAGTTA+TGG - Chr8:89439540-89439559 MsG0880047670.01.T01:intron 45.0%
TTGAGCATCCATTGCCTCAT+CGG + Chr8:89438795-89438814 None:intergenic 45.0%
! CATTTTTGTTGCAGTGGAGC+TGG - Chr8:89436851-89436870 MsG0880047670.01.T01:CDS 45.0%
! CTGCGACTGATATTCTAGCT+AGG - Chr8:89436903-89436922 MsG0880047670.01.T01:CDS 45.0%
! GATTTTTCTCCCACAGGAAC+AGG - Chr8:89440056-89440075 MsG0880047670.01.T01:CDS 45.0%
! GGGTGGCAGATTATGTTTTG+GGG - Chr8:89439410-89439429 MsG0880047670.01.T01:intron 45.0%
! TGTGTTGCATCCAATGGGTT+GGG - Chr8:89436949-89436968 MsG0880047670.01.T01:CDS 45.0%
! TTTTTCTCCCACAGGAACAG+GGG - Chr8:89440058-89440077 MsG0880047670.01.T01:CDS 45.0%
!! ACGGTGCTGAATTTTGAGGA+AGG + Chr8:89436478-89436497 None:intergenic 45.0%
!! AGGAACGGTGCTGAATTTTG+AGG + Chr8:89436482-89436501 None:intergenic 45.0%
!! ATTGATGGTGTGAGTGAACG+CGG - Chr8:89438627-89438646 MsG0880047670.01.T01:intron 45.0%
!! CGGTGCTGAATTTTGAGGAA+GGG + Chr8:89436477-89436496 None:intergenic 45.0%
!! CTGAATTTTGAGGAAGGGAG+GGG + Chr8:89436472-89436491 None:intergenic 45.0%
!! GATAAAAGCATCGCTGAGTC+TGG - Chr8:89439660-89439679 MsG0880047670.01.T01:CDS 45.0%
!! GCTGAATTTTGAGGAAGGGA+GGG + Chr8:89436473-89436492 None:intergenic 45.0%
!! GGCATTGGCACAAATGTTGA+TGG - Chr8:89440203-89440222 MsG0880047670.01.T01:five_prime_UTR 45.0%
!! GGCTACTTTGAAGCTTATCC+AGG + Chr8:89438080-89438099 None:intergenic 45.0%
!! TCCACTTGATTTGCTTCCCA+TGG - Chr8:89438256-89438275 MsG0880047670.01.T01:intron 45.0%
!! TGAATTTTGAGGAAGGGAGG+GGG + Chr8:89436471-89436490 None:intergenic 45.0%
!! TGCTGAATTTTGAGGAAGGG+AGG + Chr8:89436474-89436493 None:intergenic 45.0%
!!! GGTCACTCTTTTTTGAGGCA+AGG + Chr8:89439300-89439319 None:intergenic 45.0%
!!! TAAGGGACTGGCTTTTTGCT+CGG - Chr8:89439928-89439947 MsG0880047670.01.T01:CDS 45.0%
!!! TGGCAGATTATGTTTTGGGG+AGG - Chr8:89439413-89439432 MsG0880047670.01.T01:intron 45.0%
ACCAGGCCTGATACGATCTT+TGG - Chr8:89438987-89439006 MsG0880047670.01.T01:intron 50.0%
AGGGGGAATAATAGAGACGG+AGG + Chr8:89436454-89436473 None:intergenic 50.0%
AGTGGAGCTGGGTTACATGT+TGG - Chr8:89436863-89436882 MsG0880047670.01.T01:CDS 50.0%
ATATGCTGACCGTCTTCTGG+AGG - Chr8:89438824-89438843 MsG0880047670.01.T01:intron 50.0%
ATCTGCCACCCATATCGGAA+TGG + Chr8:89439401-89439420 None:intergenic 50.0%
GCCACTTGGGCTCAATTTCA+TGG + Chr8:89436654-89436673 None:intergenic 50.0%
GCCATGGGAAGCAAATCAAG+TGG + Chr8:89438260-89438279 None:intergenic 50.0%
GGCAATTCAGTCTCATCCAG+AGG + Chr8:89440014-89440033 None:intergenic 50.0%
GGCATTACAACCCAGCGAAT+AGG + Chr8:89439636-89439655 None:intergenic 50.0%
GGGAGGGGGAATAATAGAGA+CGG + Chr8:89436457-89436476 None:intergenic 50.0%
TACCAGCATCCATGTGTCAG+TGG - Chr8:89437175-89437194 MsG0880047670.01.T01:CDS 50.0%
TCAGTCGCAGTGTATCCAAG+TGG + Chr8:89436893-89436912 None:intergenic 50.0%
TCCAAAGATCGTATCAGGCC+TGG + Chr8:89438991-89439010 None:intergenic 50.0%
TCGACATGTTCCCTTACCCT+AGG - Chr8:89436752-89436771 MsG0880047670.01.T01:intron 50.0%
TCTGGCTAAGGCAGTGTCTT+GGG - Chr8:89440088-89440107 MsG0880047670.01.T01:CDS 50.0%
TGCATATGCTGACCGTCTTC+TGG - Chr8:89438821-89438840 MsG0880047670.01.T01:intron 50.0%
TGGTCACAGTGGTGAGCTTT+GGG + Chr8:89437318-89437337 None:intergenic 50.0%
TTATTGCCAAGCAGCCGATG+AGG - Chr8:89438778-89438797 MsG0880047670.01.T01:intron 50.0%
TTGGATAGGGAGGTCAGAAG+GGG - Chr8:89438896-89438915 MsG0880047670.01.T01:intron 50.0%
TTGGTCACAGTGGTGAGCTT+TGG + Chr8:89437319-89437338 None:intergenic 50.0%
! AAGCATCGCTGAGTCTGGAA+AGG - Chr8:89439665-89439684 MsG0880047670.01.T01:CDS 50.0%
! AGTGCAGGGCACCAATTAAC+TGG + Chr8:89438579-89438598 None:intergenic 50.0%
! GAGGAGAAGAGTGTGATGAG+AGG + Chr8:89436435-89436454 None:intergenic 50.0%
! GAGTCTGGAAAGGCTTTTCC+AGG - Chr8:89439675-89439694 MsG0880047670.01.T01:CDS 50.0%
! GGAAAGGCTTTTCCAGGTGA+AGG - Chr8:89439681-89439700 MsG0880047670.01.T01:CDS 50.0%
! GTTAATTGGTGCCCTGCACT+TGG - Chr8:89438579-89438598 MsG0880047670.01.T01:intron 50.0%
! TACATGCTTGCTCTGAGCAG+TGG + Chr8:89439175-89439194 None:intergenic 50.0%
! TCCCAAAAACGCTGCCACTT+GGG + Chr8:89436667-89436686 None:intergenic 50.0%
! TTTTGCTCGGCAGCGTTACT+GGG - Chr8:89439941-89439960 MsG0880047670.01.T01:CDS 50.0%
! TTTTTGCTCGGCAGCGTTAC+TGG - Chr8:89439940-89439959 MsG0880047670.01.T01:CDS 50.0%
!! CCAAAAGCATCCCAACCCAT+TGG + Chr8:89436962-89436981 None:intergenic 50.0%
!! TTTAGATGACCTGGACTGGC+CGG - Chr8:89438848-89438867 MsG0880047670.01.T01:intron 50.0%
!!! CCAATGGGTTGGGATGCTTT+TGG - Chr8:89436959-89436978 MsG0880047670.01.T01:CDS 50.0%
ACCTGACAGCCACTGACACA+TGG + Chr8:89437187-89437206 None:intergenic 55.0%
ACGGGGAAGCCATTCCGATA+TGG - Chr8:89439389-89439408 MsG0880047670.01.T01:intron 55.0%
AGCCACTGACACATGGATGC+TGG + Chr8:89437180-89437199 None:intergenic 55.0%
AGGAGCAATCATGGCTGTGC+CGG - Chr8:89439566-89439585 MsG0880047670.01.T01:intron 55.0%
CAAGACACTGCCTTAGCCAG+AGG + Chr8:89440089-89440108 None:intergenic 55.0%
CGGGGAAGCCATTCCGATAT+GGG - Chr8:89439390-89439409 MsG0880047670.01.T01:intron 55.0%
CTCTGGCTAAGGCAGTGTCT+TGG - Chr8:89440087-89440106 MsG0880047670.01.T01:CDS 55.0%
GGAAGCCATTCCGATATGGG+TGG - Chr8:89439393-89439412 MsG0880047670.01.T01:intron 55.0%
GTCCCAAAAACGCTGCCACT+TGG + Chr8:89436668-89436687 None:intergenic 55.0%
TCCATGTGTCAGTGGCTGTC+AGG - Chr8:89437183-89437202 MsG0880047670.01.T01:CDS 55.0%
TGAGAGGACGGAGCTTCAGA+AGG - Chr8:89439321-89439340 MsG0880047670.01.T01:intron 55.0%
TTACACTTTCCGGCCAGTCC+AGG + Chr8:89438860-89438879 None:intergenic 55.0%
TTTGCTCGGCAGCGTTACTG+GGG - Chr8:89439942-89439961 MsG0880047670.01.T01:CDS 55.0%
! ACAGGGGTCTGCTCTGGATT+TGG + Chr8:89437860-89437879 None:intergenic 55.0%
! AGCCCAAGTGGCAGCGTTTT+TGG - Chr8:89436662-89436681 MsG0880047670.01.T01:intron 55.0%
! GCCCAAGTGGCAGCGTTTTT+GGG - Chr8:89436663-89436682 MsG0880047670.01.T01:intron 55.0%
! TCTGAAGCTCCGTCCTCTCA+AGG + Chr8:89439321-89439340 None:intergenic 55.0%
!! GAGTTGTGGCGTTGGTTTCC+TGG - Chr8:89438059-89438078 MsG0880047670.01.T01:intron 55.0%
CAGTGGTGAGACTGTCCCTC+TGG - Chr8:89439995-89440014 MsG0880047670.01.T01:CDS 60.0%
CCAACACCGTGCCAAGTGCA+GGG + Chr8:89438593-89438612 None:intergenic 60.0%
CCAAGCAGCCGATGAGGCAA+TGG - Chr8:89438784-89438803 MsG0880047670.01.T01:intron 60.0%
GACACTGCCTTAGCCAGAGG+AGG + Chr8:89440086-89440105 None:intergenic 60.0%
GAGGTCAGAAGGGGCTGAGT+TGG - Chr8:89438905-89438924 MsG0880047670.01.T01:intron 60.0%
GATGGTGTGAGTGAACGCGG+TGG - Chr8:89438630-89438649 MsG0880047670.01.T01:intron 60.0%
GGAATGGCTTCCCCGTTTGC+TGG + Chr8:89439385-89439404 None:intergenic 60.0%
! CCATTGCCTCATCGGCTGCT+TGG + Chr8:89438787-89438806 None:intergenic 60.0%
! TTGGTGCCCTGCACTTGGCA+CGG - Chr8:89438584-89438603 MsG0880047670.01.T01:intron 60.0%
!! CACGGTGTTGGCCAATGAGG+AGG - Chr8:89438602-89438621 MsG0880047670.01.T01:intron 60.0%
!! TGGCACGGTGTTGGCCAATG+AGG - Chr8:89438599-89438618 MsG0880047670.01.T01:intron 60.0%
AGGAACAGGGGAGCCTCCTC+TGG - Chr8:89440070-89440089 MsG0880047670.01.T01:CDS 65.0%
AGGAGGCTCCCCTGTTCCTG+TGG + Chr8:89440069-89440088 None:intergenic 65.0%
AGGGGAGCCTCCTCTGGCTA+AGG - Chr8:89440076-89440095 MsG0880047670.01.T01:CDS 65.0%
CCCTGCACTTGGCACGGTGT+TGG - Chr8:89438590-89438609 MsG0880047670.01.T01:intron 65.0%
GCCAACACCGTGCCAAGTGC+AGG + Chr8:89438594-89438613 None:intergenic 65.0%
GGAGGCTCCCCTGTTCCTGT+GGG + Chr8:89440068-89440087 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 89436332 89440247 89436332 ID=MsG0880047670.01;Name=MsG0880047670.01
Chr8 mRNA 89436332 89440247 89436332 ID=MsG0880047670.01.T01;Parent=MsG0880047670.01;Name=MsG0880047670.01.T01;_AED=0.46;_eAED=0.47;_QI=74|0.88|0.7|1|1|1|10|0|609
Chr8 exon 89436332 89436664 89436332 ID=MsG0880047670.01.T01:exon:2452;Parent=MsG0880047670.01.T01
Chr8 exon 89436758 89437022 89436758 ID=MsG0880047670.01.T01:exon:2451;Parent=MsG0880047670.01.T01
Chr8 exon 89437145 89437299 89437145 ID=MsG0880047670.01.T01:exon:2450;Parent=MsG0880047670.01.T01
Chr8 exon 89437388 89437454 89437388 ID=MsG0880047670.01.T01:exon:2449;Parent=MsG0880047670.01.T01
Chr8 exon 89437564 89437787 89437564 ID=MsG0880047670.01.T01:exon:2448;Parent=MsG0880047670.01.T01
Chr8 exon 89437917 89438012 89437917 ID=MsG0880047670.01.T01:exon:2447;Parent=MsG0880047670.01.T01
Chr8 exon 89438114 89438233 89438114 ID=MsG0880047670.01.T01:exon:2446;Parent=MsG0880047670.01.T01
Chr8 exon 89439219 89439275 89439219 ID=MsG0880047670.01.T01:exon:2445;Parent=MsG0880047670.01.T01
Chr8 exon 89439570 89439714 89439570 ID=MsG0880047670.01.T01:exon:2444;Parent=MsG0880047670.01.T01
Chr8 exon 89439806 89440247 89439806 ID=MsG0880047670.01.T01:exon:2443;Parent=MsG0880047670.01.T01
Chr8 five_prime_UTR 89440174 89440247 89440174 ID=MsG0880047670.01.T01:five_prime_utr;Parent=MsG0880047670.01.T01
Chr8 CDS 89439806 89440173 89439806 ID=MsG0880047670.01.T01:cds;Parent=MsG0880047670.01.T01
Chr8 CDS 89439570 89439714 89439570 ID=MsG0880047670.01.T01:cds;Parent=MsG0880047670.01.T01
Chr8 CDS 89439219 89439275 89439219 ID=MsG0880047670.01.T01:cds;Parent=MsG0880047670.01.T01
Chr8 CDS 89438114 89438233 89438114 ID=MsG0880047670.01.T01:cds;Parent=MsG0880047670.01.T01
Chr8 CDS 89437917 89438012 89437917 ID=MsG0880047670.01.T01:cds;Parent=MsG0880047670.01.T01
Chr8 CDS 89437564 89437787 89437564 ID=MsG0880047670.01.T01:cds;Parent=MsG0880047670.01.T01
Chr8 CDS 89437388 89437454 89437388 ID=MsG0880047670.01.T01:cds;Parent=MsG0880047670.01.T01
Chr8 CDS 89437145 89437299 89437145 ID=MsG0880047670.01.T01:cds;Parent=MsG0880047670.01.T01
Chr8 CDS 89436758 89437022 89436758 ID=MsG0880047670.01.T01:cds;Parent=MsG0880047670.01.T01
Chr8 CDS 89436332 89436664 89436332 ID=MsG0880047670.01.T01:cds;Parent=MsG0880047670.01.T01
Gene Sequence

>MsG0880047670.01.T01

ATGCTTCATCTCAACAATGTCCAATTCCTCTCATCACACTCTTCTCCTCCGTCTCTATTATTCCCCCTCCCTTCCTCAAAATTCAGCACCGTTCCTTTTCCCACACCATTCAGAAGAACAACATCTTCTTCTACTCTCAGATTCCGCAGTCACAGTCACAGTTGTAGAATCAGAAACTCGGCAACAAATGATAAACTGAACGAAACGGAGCAGAAGAAGAAGCCTGTTAACAGAGCTTATCCTTTCCATGAAATTGAGCCCAAGTGGCAGCGTTTTTGGGACGAATTTCGCACTTTCAGAACTCCAGATGATGATATCGATACATCAAAACCTAAATATTATATTCTCGACATGTTCCCTTACCCTAGTGGAGCTGGGTTACATGTTGGACATCCACTTGGATACACTGCGACTGATATTCTAGCTAGGTTTAAACGAATGCAAGGATATAATGTGTTGCATCCAATGGGTTGGGATGCTTTTGGATTGCCTGCAGAACAATATGCTATTCAGACAGGAACTCACCCAAAGCTCACCACTGTGACCAATATTAATCGCTTTACTTCTCAGTTGAAATCATTAGGATTCTCATATGACTGGGATCGTGAAATATCAACCATAGAACCTGAATATTACAAATGGACTCAATGGATCTTTCTACAGCTTTTAAAGAGAGGATTGGCATATCAGGCTGAAGTTCCAGTTAATTGGTGCCCTGCACTTGGCACGGTGTTGGCCAATGAGGAGGTTATTGATGGTGTGAGTGAACGCGGTGGTCATCCTGTACCGATGAGGCAATGGATGCTCAAGATTACTGCATATGCTGACCGTCTTCTGGAGGATTTAGATGACCTGGACTGGCCGGAAAGTGTAAAAGAAATGCAGAGAAATTGGATAGGGAGGTCAGAAGGGGCTGAGTTGGATTTTTGCATTCTTGATGGTGATGGAAAGGAGAGAGACACGCAGATTACTGTGTATACTACCAGGCCTGATACGATCTTTGGAGCAACTTACTTGGTTGTGGCACCAGAGCATTCCTTGATCTCATCATTGATTTCCACTGCTCAGAGCAAGCATGTAGAAGATTATATTGACCTTGCCTCAAAAAAGAGTGACCTTGAGAGGACGGAGCTTCAGAAGGAAAAGACTGGAGTCTTTACTGGTTGTTATGCAAAAAATCCAGCAAACGGGGAAGCCATTCCGATATGGGTGGCAGATTATGTTTTGGGGAGTTATGGAACAGGAGCAATCATGGCTGTGCCGGCACATGATTCACGCGATTATGAGTTTGCTTTGAAATATGACATTCCTATTCGCTGGGTTGTAATGCCAGATGATAAAAGCATCGCTGAGTCTGGAAAGGCTTTTCCAGGTGAAGGCATTATTGCAAATTCATCAAATACGTTAATGGGGCTTGACATTAATGGCTTGCGTAGCAAAGAAGCAGCTCTAAAAGTCATTGATTGGGCAGAAAAAAGTGGAAATGGAAAGAGAAAGGTGAACTACAAGTTAAGGGACTGGCTTTTTGCTCGGCAGCGTTACTGGGGCGAACCTATCCCTGTCATCTTCTTGGATGACAGTGGTGAGACTGTCCCTCTGGATGAGACTGAATTGCCCCTTATTCTACCTGAATTGGATGATTTTTCTCCCACAGGAACAGGGGAGCCTCCTCTGGCTAAGGCAGTGTCTTGGGTAAGCTTATACCAAATACAAATCGTTACTTTGCTTCTGCATACTTTGTTATCAAGATATAATGGCAATTGGATGCCTTTTTATCATTTCTTTGGCATTGGCACAAATGTTGATGGTTTACCGAAATCTCACTATTAA

Protein sequence

>MsG0880047670.01.T01

MLHLNNVQFLSSHSSPPSLLFPLPSSKFSTVPFPTPFRRTTSSSTLRFRSHSHSCRIRNSATNDKLNETEQKKKPVNRAYPFHEIEPKWQRFWDEFRTFRTPDDDIDTSKPKYYILDMFPYPSGAGLHVGHPLGYTATDILARFKRMQGYNVLHPMGWDAFGLPAEQYAIQTGTHPKLTTVTNINRFTSQLKSLGFSYDWDREISTIEPEYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVIDGVSERGGHPVPMRQWMLKITAYADRLLEDLDDLDWPESVKEMQRNWIGRSEGAELDFCILDGDGKERDTQITVYTTRPDTIFGATYLVVAPEHSLISSLISTAQSKHVEDYIDLASKKSDLERTELQKEKTGVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDIPIRWVVMPDDKSIAESGKAFPGEGIIANSSNTLMGLDINGLRSKEAALKVIDWAEKSGNGKRKVNYKLRDWLFARQRYWGEPIPVIFLDDSGETVPLDETELPLILPELDDFSPTGTGEPPLAKAVSWVSLYQIQIVTLLLHTLLSRYNGNWMPFYHFFGIGTNVDGLPKSHY*