AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012876.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012876.01.T01 MTR_3g033620 89.059 393 23 2 1 375 1 391 0.0 598
MsG0380012876.01.T01 MTR_0013s0150 70.242 289 66 2 106 374 92 380 5.82e-146 418
MsG0380012876.01.T01 MTR_4g077000 59.643 280 93 2 112 371 109 388 1.56e-116 344
MsG0380012876.01.T01 MTR_3g071970 33.559 295 159 7 109 371 427 716 9.46e-45 164
MsG0380012876.01.T01 MTR_2g084605 26.471 272 169 6 127 371 125 392 1.90e-22 98.2
MsG0380012876.01.T01 MTR_7g064130 28.772 285 168 9 116 371 170 448 8.89e-21 93.6
MsG0380012876.01.T01 MTR_7g074090 27.511 229 139 6 161 372 90 308 4.63e-17 81.6
MsG0380012876.01.T01 MTR_7g074090 27.511 229 139 6 161 372 90 308 1.92e-16 80.5
MsG0380012876.01.T01 MTR_7g074090 27.074 229 140 6 161 372 108 326 3.15e-16 79.7
MsG0380012876.01.T01 MTR_7g074070 28.509 228 136 6 161 371 101 318 3.82e-15 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012876.01.T01 AT5G12470 59.170 289 98 2 104 372 96 384 2.89e-121 356
MsG0380012876.01.T01 AT3G56140 34.114 299 160 7 109 375 200 493 5.04e-46 165
MsG0380012876.01.T01 AT2G40400 34.448 299 159 7 109 375 410 703 4.68e-45 165
MsG0380012876.01.T01 AT2G40400 34.448 299 159 7 109 375 410 703 4.68e-45 165
MsG0380012876.01.T01 AT3G56140 34.114 299 160 7 109 375 419 712 5.62e-45 165
MsG0380012876.01.T01 AT3G56140 34.114 299 160 7 109 375 419 712 5.62e-45 165
MsG0380012876.01.T01 AT2G40400 33.878 245 126 6 109 321 410 650 5.41e-31 124
MsG0380012876.01.T01 AT5G22790 27.875 287 169 9 116 371 154 433 5.35e-24 103
MsG0380012876.01.T01 AT2G37860 29.154 319 179 11 91 371 123 432 3.50e-18 85.9
MsG0380012876.01.T01 AT2G37860 29.154 319 179 11 91 371 123 432 3.50e-18 85.9
MsG0380012876.01.T01 AT3G08640 27.948 229 136 6 165 374 107 325 9.15e-18 84.0
MsG0380012876.01.T01 AT3G08630 27.586 232 133 7 165 374 104 322 1.78e-17 83.2

Find 110 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAAAATTTGGAGGGTTTA+AGG 0.142353 3:-26185486 MsG0380012876.01.T01:CDS
TCAGAACTGCTAATACTTAT+TGG 0.149928 3:-26181866 MsG0380012876.01.T01:CDS
CTTATTGCCAAATTCTTCTA+TGG 0.222326 3:-26183545 MsG0380012876.01.T01:CDS
AATTATTGAGCAACGGATTC+TGG 0.230169 3:-26181940 MsG0380012876.01.T01:CDS
GGAGGTGGTGGTGATGGTGG+TGG 0.230653 3:-26185707 MsG0380012876.01.T01:CDS
AGGACATCCATAGAAGAATT+TGG 0.239459 3:+26183538 None:intergenic
CAGAACTGCTAATACTTATT+GGG 0.243000 3:-26181865 MsG0380012876.01.T01:CDS
GGTGGTGGTGATGGTGGTGG+GGG 0.260165 3:-26185704 MsG0380012876.01.T01:CDS
GTTAAGGCGGGGAGGGTTCC+TGG 0.280545 3:-26185563 MsG0380012876.01.T01:CDS
GGCAATGGAGGCGGGTTTCC+AGG 0.282724 3:-26185734 MsG0380012876.01.T01:CDS
TTGGTTAAGCCTTTATCTTC+TGG 0.287578 3:+26181709 None:intergenic
TTCAGGTGGCTGTTAAAATT+TGG 0.299303 3:-26185497 MsG0380012876.01.T01:CDS
AGTGGAGGTGGTGGTGATGG+TGG 0.300664 3:-26185710 MsG0380012876.01.T01:CDS
GTTACTTTATCTTAGGTAAC+AGG 0.304911 3:-26183647 MsG0380012876.01.T01:intron
AGGTGGTGGTGATGGTGGTG+GGG 0.310725 3:-26185705 MsG0380012876.01.T01:CDS
CATCTCTTATGCAGCGTAAC+GGG 0.313556 3:-26183199 MsG0380012876.01.T01:intron
GTGGTGGTGATGGTGGTGGG+GGG 0.315241 3:-26185703 MsG0380012876.01.T01:CDS
GTTCTTAACTAAGCTTGTTA+TGG 0.322891 3:-26185441 MsG0380012876.01.T01:CDS
GAGGTGGTGGTGATGGTGGT+GGG 0.338903 3:-26185706 MsG0380012876.01.T01:CDS
CGACGGTGGAGGTGGGGAAG+AGG 0.344446 3:-26185678 MsG0380012876.01.T01:CDS
TGGAGGAGTCAGTTGTGTTC+AGG 0.346622 3:-26185514 MsG0380012876.01.T01:CDS
TAGGTAACAGGCATAGTAAC+AGG 0.352113 3:-26183635 MsG0380012876.01.T01:CDS
AGAAGAGGCAATGCTGGTTC+TGG 0.358747 3:-26185636 MsG0380012876.01.T01:CDS
TTCTCAGCGGGCAATGGAGG+CGG 0.361329 3:-26185743 MsG0380012876.01.T01:CDS
GGATTTGGCTGTTGCTGTTA+AGG 0.364292 3:-26185579 MsG0380012876.01.T01:CDS
CAGTTAGTATAAGTTTGTTT+TGG 0.370260 3:+26181904 None:intergenic
GCTACACTGGTTGAGATTAC+AGG 0.377802 3:+26182690 None:intergenic
CAAAACAAACTTATACTAAC+TGG 0.384571 3:-26181903 MsG0380012876.01.T01:CDS
GGAGAATGATGCAAATGATT+TGG 0.390452 3:+26185779 None:intergenic
GGGAGTGGAGGTGGTGGTGA+TGG 0.394284 3:-26185713 MsG0380012876.01.T01:CDS
TGGTGGTGATGGTGGTGGGG+GGG 0.396626 3:-26185702 MsG0380012876.01.T01:CDS
ATCTCAACCAGTGTAGCATA+TGG 0.402251 3:-26182684 MsG0380012876.01.T01:CDS
GGGTTTCCAGGGAGTGGAGG+TGG 0.402523 3:-26185722 MsG0380012876.01.T01:CDS
AGAAGAATTTAGAAACTTCA+TGG 0.420109 3:+26185846 None:intergenic
ATGCTGGTTCTGGCTGAGAC+TGG 0.434790 3:-26185626 MsG0380012876.01.T01:CDS
GGCGGGTTTCCAGGGAGTGG+AGG 0.439477 3:-26185725 MsG0380012876.01.T01:CDS
TCTCAGCGGGCAATGGAGGC+GGG 0.440741 3:-26185742 MsG0380012876.01.T01:CDS
TGTTGCTGTTAAGGCGGGGA+GGG 0.447851 3:-26185570 MsG0380012876.01.T01:CDS
AGGGTTTAAGGAAAGGTTGT+TGG 0.448786 3:-26185474 MsG0380012876.01.T01:CDS
AAATCATTTGCATCATTCTC+CGG 0.462649 3:-26185777 MsG0380012876.01.T01:CDS
AGTTGGAACCGGTGCTTCAC+TGG 0.464486 3:-26183162 MsG0380012876.01.T01:intron
ATAAGTCCAGCACTAATTGC+AGG 0.470510 3:+26183563 None:intergenic
TTGGCTGTTGCTGTTAAGGC+GGG 0.475087 3:-26185575 MsG0380012876.01.T01:CDS
AGCCTTCTGTGCATTGATCA+AGG 0.477024 3:+26182743 None:intergenic
TCTCAATACTCAAATGGCTA+TGG 0.478566 3:-26185978 None:intergenic
GTTTCCATGTCTTTCTCAGC+GGG 0.489070 3:-26185755 MsG0380012876.01.T01:CDS
TTTCCAGGGAGTGGAGGTGG+TGG 0.489818 3:-26185719 MsG0380012876.01.T01:CDS
ATGTCTTTCTCAGCGGGCAA+TGG 0.489826 3:-26185749 MsG0380012876.01.T01:CDS
AGAAAATTTCACTAAAGAGA+TGG 0.492493 3:-26184561 MsG0380012876.01.T01:CDS
GGGGCAAAGCTGTTCGTAGT+TGG 0.495711 3:-26183179 MsG0380012876.01.T01:CDS
AAATAGAGAAGAGGCAATGC+TGG 0.496130 3:-26185642 MsG0380012876.01.T01:CDS
CCTCCTCCTGCAATTAGTGC+TGG 0.497096 3:-26183569 MsG0380012876.01.T01:CDS
CGTGTTTACCAGTGAAGCAC+CGG 0.499717 3:+26183154 None:intergenic
GGAGGCGGGTTTCCAGGGAG+TGG 0.500171 3:-26185728 MsG0380012876.01.T01:CDS
GGTTGGAGTCCAGAAGATAA+AGG 0.501111 3:-26181718 MsG0380012876.01.T01:CDS
AAGCTGTTCGTAGTTGGAAC+CGG 0.502348 3:-26183173 MsG0380012876.01.T01:CDS
AGGTGGCTGTTAAAATTTGG+AGG 0.502551 3:-26185494 MsG0380012876.01.T01:CDS
GCTGAGAAAGACATGGAAAC+CGG 0.503241 3:+26185758 None:intergenic
GAACAAGTGTGGTGAAATGT+TGG 0.508561 3:+26185946 None:intergenic
GGCTGAGACTGGAAGGTCGA+TGG 0.512699 3:-26185615 MsG0380012876.01.T01:CDS
TCACCACCACCTCCACTCCC+TGG 0.514176 3:+26185716 None:intergenic
GCAATGGAGGCGGGTTTCCA+GGG 0.515014 3:-26185733 MsG0380012876.01.T01:CDS
TTAAGAGAAACAGTGGGAGC+AGG 0.517008 3:+26183593 None:intergenic
GAATTTAGAAACTTCATGGC+GGG 0.526139 3:+26185850 None:intergenic
CTGTTGCTGTTAAGGCGGGG+AGG 0.533728 3:-26185571 MsG0380012876.01.T01:CDS
AAATGATTTGGCATGAAAGT+TGG 0.536610 3:+26185791 None:intergenic
AAGAGATAGAAATAGAGAAG+AGG 0.536676 3:-26185651 MsG0380012876.01.T01:CDS
AACTTCATGGCGGGCTGTGA+TGG 0.537475 3:+26185859 None:intergenic
AATTTGGAGGGTTTAAGGAA+AGG 0.537593 3:-26185481 MsG0380012876.01.T01:CDS
ATCAGGTATCAAGTACTAGC+AGG 0.538106 3:-26181963 MsG0380012876.01.T01:intron
AGCAACGGATTCTGGAACCA+TGG 0.539826 3:-26181932 MsG0380012876.01.T01:CDS
TCTTTCTCAGCGGGCAATGG+AGG 0.539993 3:-26185746 MsG0380012876.01.T01:CDS
TCTCAACCAGTGTAGCATAT+GGG 0.543058 3:-26182683 MsG0380012876.01.T01:CDS
TGGTAGTAGTTAGCAACCTC+AGG 0.544386 3:-26182653 MsG0380012876.01.T01:intron
GGGAGATGAATGATTGAGCT+TGG 0.545705 3:+26185820 None:intergenic
AGGCAGCTGCAGAGTTGGAG+CGG 0.551037 3:-26184589 MsG0380012876.01.T01:CDS
GTAAATCCCATATGCTACAC+TGG 0.555578 3:+26182677 None:intergenic
TTTGGCTGTTGCTGTTAAGG+CGG 0.558967 3:-26185576 MsG0380012876.01.T01:CDS
GTAAAGAAGAATGGCTGTAG+TGG 0.563116 3:+26185891 None:intergenic
GGGTTCCTGGTTCGATAGTG+CGG 0.567475 3:-26185550 MsG0380012876.01.T01:CDS
GGCATGAAAGTTGGTGCAGT+GGG 0.571380 3:+26185800 None:intergenic
CCAGCACTAATTGCAGGAGG+AGG 0.574932 3:+26183569 None:intergenic
CCATCTCTTATGCAGCGTAA+CGG 0.578736 3:-26183200 MsG0380012876.01.T01:intron
AACCTCCGCACTATCGAACC+AGG 0.581990 3:+26185545 None:intergenic
TATATCTTTGAGTAGGTGGG+TGG 0.584566 3:-26181754 MsG0380012876.01.T01:intron
AGGAGGTTTAAGAGAAACAG+TGG 0.589294 3:+26183586 None:intergenic
GGTGGCTGTTAAAATTTGGA+GGG 0.589646 3:-26185493 MsG0380012876.01.T01:CDS
CGGGCTGTGATGGTGTAGCT+TGG 0.591128 3:+26185869 None:intergenic
TAGCAGGAATTATTGAGCAA+CGG 0.592464 3:-26181947 MsG0380012876.01.T01:CDS
AGAACTGCTAATACTTATTG+GGG 0.592650 3:-26181864 MsG0380012876.01.T01:CDS
TGGTTCTGGCTGAGACTGGA+AGG 0.593387 3:-26185622 MsG0380012876.01.T01:CDS
ATCTCTTATGCAGCGTAACG+GGG 0.596886 3:-26183198 MsG0380012876.01.T01:intron
TGCCTTGATCAATGCACAGA+AGG 0.602798 3:-26182745 MsG0380012876.01.T01:CDS
TGTAGCTTGGTAAAGAAGAA+TGG 0.622312 3:+26185882 None:intergenic
GGTTTCCATGTCTTTCTCAG+CGG 0.622323 3:-26185756 MsG0380012876.01.T01:CDS
AGGAGTCAGTTGTGTTCAGG+TGG 0.622724 3:-26185511 MsG0380012876.01.T01:CDS
TGTTGTTGTTATCTTCACCA+AGG 0.630917 3:-26185414 MsG0380012876.01.T01:intron
TGTAGCATATGGGATTTACA+TGG 0.636490 3:-26182673 MsG0380012876.01.T01:CDS
GTGTGGTGAAATGTTGGAGA+AGG 0.645936 3:+26185952 None:intergenic
ATTGCCCGCTGAGAAAGACA+TGG 0.652882 3:+26185751 None:intergenic
TGGCTGTTGCTGTTAAGGCG+GGG 0.657405 3:-26185574 MsG0380012876.01.T01:CDS
ACAGCAACAGCCAAATCCGT+CGG 0.658539 3:+26185584 None:intergenic
TTCCTGGTTCGATAGTGCGG+AGG 0.658794 3:-26185547 MsG0380012876.01.T01:CDS
TGGCATGAAAGTTGGTGCAG+TGG 0.663533 3:+26185799 None:intergenic
GGAGGTTTAAGAGAAACAGT+GGG 0.664978 3:+26183587 None:intergenic
GATTACAGGTAAATTCTCAA+CGG 0.665828 3:+26182704 None:intergenic
ATGGCTGTAGTGGTAGAATG+TGG 0.683350 3:+26185901 None:intergenic
AGTCCAGCACTAATTGCAGG+AGG 0.693475 3:+26183566 None:intergenic
GTGTGATGAGTGAACAAGTG+TGG 0.730371 3:+26185935 None:intergenic
AGAATTTAGAAACTTCATGG+CGG 0.742570 3:+26185849 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTAGAATTAATTTTTTT+TGG - Chr3:26185343-26185362 MsG0380012876.01.T01:intron 10.0%
!!! GATTTTTTATTTTTCATTTA+AGG - Chr3:26185679-26185698 MsG0380012876.01.T01:CDS 10.0%
!! AATACACTAAATTGTAATAA+TGG + Chr3:26182297-26182316 None:intergenic 15.0%
!! AATTTAATAATTAGCATGAA+TGG - Chr3:26183485-26183504 MsG0380012876.01.T01:intron 15.0%
!! ATAATATAGTATCTAAACAT+AGG + Chr3:26182357-26182376 None:intergenic 15.0%
!! ATTTAATAATTAGCATGAAT+GGG - Chr3:26183486-26183505 MsG0380012876.01.T01:intron 15.0%
!! TTATAATTGTAGATTATAGA+TGG - Chr3:26184696-26184715 MsG0380012876.01.T01:intron 15.0%
!! TTCTAAATCTATGTTATAAA+TGG + Chr3:26185332-26185351 None:intergenic 15.0%
!!! AAAAGCATATAATAACTTTT+AGG + Chr3:26185885-26185904 None:intergenic 15.0%
!!! ATTTTATACTGAATATGAAA+AGG + Chr3:26184210-26184229 None:intergenic 15.0%
!!! ATTTTTTTGGTAATTTGTAA+AGG + Chr3:26182780-26182799 None:intergenic 15.0%
!!! TCAAATTGTTATTAATCATT+AGG - Chr3:26183238-26183257 MsG0380012876.01.T01:intron 15.0%
!!! TCTATTTGACAATTTAATTT+TGG + Chr3:26183620-26183639 None:intergenic 15.0%
!! AAAAATCAAATATTTACCTC+AGG + Chr3:26185666-26185685 None:intergenic 20.0%
!! TTTATATCCTCAAATTATTG+TGG - Chr3:26185591-26185610 MsG0380012876.01.T01:CDS 20.0%
!!! AAATTTTAGAACAAGCTAAA+AGG + Chr3:26184579-26184598 None:intergenic 20.0%
!!! CTCTATTTTACTTGTTTTTT+AGG + Chr3:26182476-26182495 None:intergenic 20.0%
!!! TATTTAAAGTATAGAGTGAA+AGG - Chr3:26182379-26182398 MsG0380012876.01.T01:intron 20.0%
!!! TCACTCTTTTAAGTAAATAA+TGG + Chr3:26183024-26183043 None:intergenic 20.0%
!!! TTTAGAATGTTCTTGTTAAA+TGG - Chr3:26182439-26182458 MsG0380012876.01.T01:intron 20.0%
!!! TTTGACAATTTAATTTTGGA+AGG + Chr3:26183616-26183635 None:intergenic 20.0%
! AAAATTGCAATCAAAATCGA+TGG + Chr3:26185376-26185395 None:intergenic 25.0%
! AAAGAATGAATGATGAAGAT+TGG + Chr3:26183879-26183898 None:intergenic 25.0%
! AAGGAAATAACTATTTGACT+TGG + Chr3:26184441-26184460 None:intergenic 25.0%
! AAGTAACAAACTGAATAAGA+TGG + Chr3:26184018-26184037 None:intergenic 25.0%
! AGAAAATTAGCCATATGTAA+TGG - Chr3:26183049-26183068 MsG0380012876.01.T01:intron 25.0%
! AGAAAATTTCACTAAAGAGA+TGG - Chr3:26183117-26183136 MsG0380012876.01.T01:intron 25.0%
! AGAAGAATTTAGAAACTTCA+TGG + Chr3:26181835-26181854 None:intergenic 25.0%
! ATTCTCGTGCATATATTATT+CGG - Chr3:26185105-26185124 MsG0380012876.01.T01:intron 25.0%
! CAAAACAAACTTATACTAAC+TGG - Chr3:26185775-26185794 MsG0380012876.01.T01:CDS 25.0%
! TAAATCAAAGCAAGAAACAA+GGG - Chr3:26183401-26183420 MsG0380012876.01.T01:intron 25.0%
! TATACACTTCTACAAAGAAT+AGG - Chr3:26184384-26184403 MsG0380012876.01.T01:intron 25.0%
! TCTGCAATGTAAAATAAAAG+TGG - Chr3:26182886-26182905 MsG0380012876.01.T01:intron 25.0%
! TTAAATCAAAGCAAGAAACA+AGG - Chr3:26183400-26183419 MsG0380012876.01.T01:intron 25.0%
! TTGATTAATTACTAAGTGTC+TGG + Chr3:26185083-26185102 None:intergenic 25.0%
! TTTGGTATATATCTTTGAGT+AGG - Chr3:26185917-26185936 MsG0380012876.01.T01:CDS 25.0%
!! AGTTATTTCCTTATAAGTGA+AGG - Chr3:26184449-26184468 MsG0380012876.01.T01:intron 25.0%
!! ATATATTATTCGGACTTTTG+AGG - Chr3:26185115-26185134 MsG0380012876.01.T01:intron 25.0%
!! CAACCATAATTAATCTTTTC+CGG + Chr3:26183804-26183823 None:intergenic 25.0%
!! TATATTATTCGGACTTTTGA+GGG - Chr3:26185116-26185135 MsG0380012876.01.T01:intron 25.0%
!!! ATTTTGTAGTAGTTTGTTGA+AGG + Chr3:26185059-26185078 None:intergenic 25.0%
!!! CAGTTAGTATAAGTTTGTTT+TGG + Chr3:26185777-26185796 None:intergenic 25.0%
!!! CTTTAAGCTGATGATTTTTT+TGG + Chr3:26182793-26182812 None:intergenic 25.0%
!!! GCAATATTTTTTATTCAGGT+TGG - Chr3:26184895-26184914 MsG0380012876.01.T01:intron 25.0%
!!! GCTTGCAATATTTTTTATTC+AGG - Chr3:26184891-26184910 MsG0380012876.01.T01:intron 25.0%
!!! TCAGTTTGTTACTTTATCTT+AGG - Chr3:26184024-26184043 MsG0380012876.01.T01:intron 25.0%
!!! TGCATTTTAGGATTTAAGTT+GGG + Chr3:26185183-26185202 None:intergenic 25.0%
!!! TTTTTTATTCAGGTTGGTAT+AGG - Chr3:26184901-26184920 MsG0380012876.01.T01:intron 25.0%
AAAACTCATCATCCCAAATA+AGG + Chr3:26182944-26182963 None:intergenic 30.0%
AAAATCGCAATCAAAATCGA+TGG + Chr3:26185272-26185291 None:intergenic 30.0%
AAATCATTTGCATCATTCTC+CGG - Chr3:26181901-26181920 MsG0380012876.01.T01:CDS 30.0%
AAATTACTGAGAACTTGAAC+TGG + Chr3:26183517-26183536 None:intergenic 30.0%
AACACAATAAGCATCATTTG+CGG + Chr3:26183382-26183401 None:intergenic 30.0%
AACAGCTGATCATATATGTT+TGG + Chr3:26184320-26184339 None:intergenic 30.0%
AAGAGATAGAAATAGAGAAG+AGG - Chr3:26182027-26182046 MsG0380012876.01.T01:intron 30.0%
AAGTTTGTAGGACTTCTAAT+TGG - Chr3:26182810-26182829 MsG0380012876.01.T01:intron 30.0%
ACCTACTGTTCATGTAATTT+AGG - Chr3:26183451-26183470 MsG0380012876.01.T01:intron 30.0%
ACTAACTTTGACACACAAAT+TGG + Chr3:26182617-26182636 None:intergenic 30.0%
AGAACTGCTAATACTTATTG+GGG - Chr3:26185814-26185833 MsG0380012876.01.T01:CDS 30.0%
AGAATTTAGAAACTTCATGG+CGG + Chr3:26181832-26181851 None:intergenic 30.0%
AGATTCCAACTTTGTAACTT+TGG + Chr3:26182975-26182994 None:intergenic 30.0%
ATCATCAGCTTAAAGTTTGT+AGG - Chr3:26182798-26182817 MsG0380012876.01.T01:intron 30.0%
ATTATGAATGTCGGCATTTA+AGG + Chr3:26183765-26183784 None:intergenic 30.0%
CAACTTAAATCCTAAAATGC+AGG - Chr3:26185182-26185201 MsG0380012876.01.T01:intron 30.0%
CAGAACTGCTAATACTTATT+GGG - Chr3:26185813-26185832 MsG0380012876.01.T01:CDS 30.0%
CTGATCATATATGTTTGGAT+CGG + Chr3:26184315-26184334 None:intergenic 30.0%
CTTATTGCCAAATTCTTCTA+TGG - Chr3:26184133-26184152 MsG0380012876.01.T01:intron 30.0%
GACAAGATATCCATTACATA+TGG + Chr3:26183062-26183081 None:intergenic 30.0%
GATCAGCTGTTAATGAATTT+CGG - Chr3:26184329-26184348 MsG0380012876.01.T01:intron 30.0%
GATTACAGGTAAATTCTCAA+CGG + Chr3:26184977-26184996 None:intergenic 30.0%
GCATTCATGTTAGAAATTCA+AGG + Chr3:26184873-26184892 None:intergenic 30.0%
GTAAAATAAAAGTGGAACGA+GGG - Chr3:26182894-26182913 MsG0380012876.01.T01:intron 30.0%
GTATATATCTTTGAGTAGGT+GGG - Chr3:26185921-26185940 MsG0380012876.01.T01:CDS 30.0%
GTTAAAATTTGGAGGGTTTA+AGG - Chr3:26182192-26182211 MsG0380012876.01.T01:intron 30.0%
TAGCCGGAAAAGATTAATTA+TGG - Chr3:26183798-26183817 MsG0380012876.01.T01:intron 30.0%
TATGCAAAATGTACACTCTT+GGG - Chr3:26182555-26182574 MsG0380012876.01.T01:intron 30.0%
TCAGAACTGCTAATACTTAT+TGG - Chr3:26185812-26185831 MsG0380012876.01.T01:CDS 30.0%
TGGAAGGGAATAGAAAAATT+GGG + Chr3:26185470-26185489 None:intergenic 30.0%
TGTAAAATAAAAGTGGAACG+AGG - Chr3:26182893-26182912 MsG0380012876.01.T01:intron 30.0%
TTATGCAAAATGTACACTCT+TGG - Chr3:26182554-26182573 MsG0380012876.01.T01:intron 30.0%
TTGGAAGGGAATAGAAAAAT+TGG + Chr3:26185471-26185490 None:intergenic 30.0%
! AAATGATTTGGCATGAAAGT+TGG + Chr3:26181890-26181909 None:intergenic 30.0%
! AAGGATTTGTTTATGTGATC+AGG - Chr3:26185698-26185717 MsG0380012876.01.T01:CDS 30.0%
! AGTTCAAGTTCTCAGTAATT+TGG - Chr3:26183516-26183535 MsG0380012876.01.T01:intron 30.0%
! ATAATTAATCTTTTCCGGCT+AGG + Chr3:26183799-26183818 None:intergenic 30.0%
! ATATTATTCGGACTTTTGAG+GGG - Chr3:26185117-26185136 MsG0380012876.01.T01:intron 30.0%
! CTTACACAGATGTTTTCATT+CGG - Chr3:26185564-26185583 MsG0380012876.01.T01:CDS 30.0%
! GACTTTTGTAGAATCGATAT+AGG + Chr3:26185406-26185425 None:intergenic 30.0%
! GTAATAATGGAAAGAAACCT+TGG + Chr3:26182284-26182303 None:intergenic 30.0%
! GTTACTTTATCTTAGGTAAC+AGG - Chr3:26184031-26184050 MsG0380012876.01.T01:intron 30.0%
! GTTTTCTACATGAACATTTG+TGG - Chr3:26183351-26183370 MsG0380012876.01.T01:intron 30.0%
! TAATTTGTAAAGGCGACAAA+AGG + Chr3:26182770-26182789 None:intergenic 30.0%
! TTTTGCCACATTATGAATGT+CGG + Chr3:26183774-26183793 None:intergenic 30.0%
!! CGATGGATTTTGTCTATTTT+GGG + Chr3:26185255-26185274 None:intergenic 30.0%
!! GTTCTTAACTAAGCTTGTTA+TGG - Chr3:26182237-26182256 MsG0380012876.01.T01:intron 30.0%
!! TAACAGGTTTTGTACTAGTT+TGG - Chr3:26184059-26184078 MsG0380012876.01.T01:intron 30.0%
!! TCGATGGATTTTGTCTATTT+TGG + Chr3:26185256-26185275 None:intergenic 30.0%
!!! CTGCATTTTAGGATTTAAGT+TGG + Chr3:26185184-26185203 None:intergenic 30.0%
!!! GCTTTTTAGTTCTCATGATT+TGG - Chr3:26185899-26185918 MsG0380012876.01.T01:CDS 30.0%
!!! GTGTTTAGTATTTTAACCTG+AGG - Chr3:26185647-26185666 MsG0380012876.01.T01:CDS 30.0%
!!! TCTATTTTGGGATTCTTCTA+TGG + Chr3:26185243-26185262 None:intergenic 30.0%
!!! TTAACCTGAAAAGCATTTTC+AGG + Chr3:26184163-26184182 None:intergenic 30.0%
AAAGCTAAAATGCGACATCA+AGG + Chr3:26183918-26183937 None:intergenic 35.0%
AAATGCCGACATTCATAATG+TGG - Chr3:26183766-26183785 MsG0380012876.01.T01:intron 35.0%
AAATGTACACTCTTGGGATT+AGG - Chr3:26182561-26182580 MsG0380012876.01.T01:intron 35.0%
AATTTGGAGGGTTTAAGGAA+AGG - Chr3:26182197-26182216 MsG0380012876.01.T01:intron 35.0%
ACCAAATGCAAGTTCTATTC+TGG + Chr3:26182533-26182552 None:intergenic 35.0%
ACCAGAATAGAACTTGCATT+TGG - Chr3:26182529-26182548 MsG0380012876.01.T01:intron 35.0%
ACGTCTTCAATATGAAGTGT+CGG + Chr3:26185529-26185548 None:intergenic 35.0%
AGATTGACGATGGAAACTAA+TGG + Chr3:26184666-26184685 None:intergenic 35.0%
AGGACATCCATAGAAGAATT+TGG + Chr3:26184143-26184162 None:intergenic 35.0%
ATGAATTTCGGTTTCTCAAC+AGG - Chr3:26184341-26184360 MsG0380012876.01.T01:intron 35.0%
ATTACATGAACAGTAGGTGA+AGG + Chr3:26183449-26183468 None:intergenic 35.0%
GAATTTAGAAACTTCATGGC+GGG + Chr3:26181831-26181850 None:intergenic 35.0%
GATCTATGAACATGTTACTG+TGG - Chr3:26182321-26182340 MsG0380012876.01.T01:intron 35.0%
GCCTAAATTACATGAACAGT+AGG + Chr3:26183455-26183474 None:intergenic 35.0%
GGAGAATGATGCAAATGATT+TGG + Chr3:26181902-26181921 None:intergenic 35.0%
GGTATATATCTTTGAGTAGG+TGG - Chr3:26185920-26185939 MsG0380012876.01.T01:CDS 35.0%
TAAAGGCGACAAAAGGAATT+TGG + Chr3:26182763-26182782 None:intergenic 35.0%
TAGCAGGAATTATTGAGCAA+CGG - Chr3:26185731-26185750 MsG0380012876.01.T01:CDS 35.0%
TCGACATCCACAATAATTTG+AGG + Chr3:26185601-26185620 None:intergenic 35.0%
TGTAGCATATGGGATTTACA+TGG - Chr3:26185005-26185024 MsG0380012876.01.T01:intron 35.0%
TGTAGCTTGGTAAAGAAGAA+TGG + Chr3:26181799-26181818 None:intergenic 35.0%
TTCACCAAAACGATATGCTA+AGG + Chr3:26184730-26184749 None:intergenic 35.0%
TTCAGGTGGCTGTTAAAATT+TGG - Chr3:26182181-26182200 MsG0380012876.01.T01:intron 35.0%
TTCCAACTTTGTAACTTTGG+TGG + Chr3:26182972-26182991 None:intergenic 35.0%
TTCCACCAAAGTTACAAAGT+TGG - Chr3:26182967-26182986 MsG0380012876.01.T01:intron 35.0%
TTTCTCGATTGTTTGCAGAA+TGG + Chr3:26184758-26184777 None:intergenic 35.0%
! AATTATTGAGCAACGGATTC+TGG - Chr3:26185738-26185757 MsG0380012876.01.T01:CDS 35.0%
! ACAAAGAATAGGTGCTATAG+TGG - Chr3:26184395-26184414 MsG0380012876.01.T01:intron 35.0%
! ACTTCCTTAGCATATCGTTT+TGG - Chr3:26184723-26184742 MsG0380012876.01.T01:intron 35.0%
! ATGTCCTGAAAATGCTTTTC+AGG - Chr3:26184156-26184175 MsG0380012876.01.T01:intron 35.0%
! TGGATATCTTGTCTGTTTTC+AGG - Chr3:26183069-26183088 MsG0380012876.01.T01:intron 35.0%
! TGTTGTTGTTATCTTCACCA+AGG - Chr3:26182264-26182283 MsG0380012876.01.T01:intron 35.0%
!! AGTTGGGATTTTGACAACAT+TGG + Chr3:26185167-26185186 None:intergenic 35.0%
!! TGTAGTAGTTTGTTGAAGGA+TGG + Chr3:26185055-26185074 None:intergenic 35.0%
!!! GGATTTTGTTGTTGCTAATG+TGG - Chr3:26183138-26183157 MsG0380012876.01.T01:intron 35.0%
AAATAGAGAAGAGGCAATGC+TGG - Chr3:26182036-26182055 MsG0380012876.01.T01:intron 40.0%
AAGTTGGAATCTCTCTCTAC+AGG - Chr3:26182983-26183002 MsG0380012876.01.T01:intron 40.0%
AATGTGGCAAAATTCCTAGC+CGG - Chr3:26183782-26183801 MsG0380012876.01.T01:intron 40.0%
AATTTCGGTTTCTCAACAGG+TGG - Chr3:26184344-26184363 MsG0380012876.01.T01:intron 40.0%
ACAATCGAGAAAGTGGACAT+AGG - Chr3:26184766-26184785 MsG0380012876.01.T01:intron 40.0%
AGAAAGACCTTGTTAGCAGA+GGG + Chr3:26182869-26182888 None:intergenic 40.0%
AGGAGGTTTAAGAGAAACAG+TGG + Chr3:26184095-26184114 None:intergenic 40.0%
AGGGTTTAAGGAAAGGTTGT+TGG - Chr3:26182204-26182223 MsG0380012876.01.T01:intron 40.0%
AGGTGGCTGTTAAAATTTGG+AGG - Chr3:26182184-26182203 MsG0380012876.01.T01:intron 40.0%
ATAAGTCCAGCACTAATTGC+AGG + Chr3:26184118-26184137 None:intergenic 40.0%
ATCAGGTATCAAGTACTAGC+AGG - Chr3:26185715-26185734 MsG0380012876.01.T01:CDS 40.0%
ATCTCAACCAGTGTAGCATA+TGG - Chr3:26184994-26185013 MsG0380012876.01.T01:intron 40.0%
ATGTTGACGAAGATTGACGA+TGG + Chr3:26184676-26184695 None:intergenic 40.0%
CAAATAAGGTAGTCCGTTTG+GGG + Chr3:26182930-26182949 None:intergenic 40.0%
CAATCGAGAAAGTGGACATA+GGG - Chr3:26184767-26184786 MsG0380012876.01.T01:intron 40.0%
CCAAATAAGGTAGTCCGTTT+GGG + Chr3:26182931-26182950 None:intergenic 40.0%
CTAATGGAGTTCCATATGCA+AGG + Chr3:26184650-26184669 None:intergenic 40.0%
CTATGGATTTGAGTCGTTGA+AGG + Chr3:26185226-26185245 None:intergenic 40.0%
GAACAAGTGTGGTGAAATGT+TGG + Chr3:26181735-26181754 None:intergenic 40.0%
GGAGATGACCTTCACTTATA+AGG + Chr3:26184460-26184479 None:intergenic 40.0%
GGAGGTTTAAGAGAAACAGT+GGG + Chr3:26184094-26184113 None:intergenic 40.0%
GGTGGCTGTTAAAATTTGGA+GGG - Chr3:26182185-26182204 MsG0380012876.01.T01:intron 40.0%
GTAAAGAAGAATGGCTGTAG+TGG + Chr3:26181790-26181809 None:intergenic 40.0%
GTAAATCCCATATGCTACAC+TGG + Chr3:26185004-26185023 None:intergenic 40.0%
TAGGTAACAGGCATAGTAAC+AGG - Chr3:26184043-26184062 MsG0380012876.01.T01:intron 40.0%
TATATCTTTGAGTAGGTGGG+TGG - Chr3:26185924-26185943 MsG0380012876.01.T01:CDS 40.0%
TCTCAACCAGTGTAGCATAT+GGG - Chr3:26184995-26185014 MsG0380012876.01.T01:intron 40.0%
TCTGCAAACAATCGAGAAAG+TGG - Chr3:26184759-26184778 MsG0380012876.01.T01:intron 40.0%
TGCGACATCAAGGAGATTAT+AGG + Chr3:26183908-26183927 None:intergenic 40.0%
TGTTAGCAGAGGGATTTCAA+AGG + Chr3:26182859-26182878 None:intergenic 40.0%
TTCTTGCGTATGTCTATCGA+GGG - Chr3:26183208-26183227 MsG0380012876.01.T01:intron 40.0%
TTGAAATCCCTCTGCTAACA+AGG - Chr3:26182859-26182878 MsG0380012876.01.T01:intron 40.0%
TTTACCTCGATAGTTCAGCA+TGG - Chr3:26183568-26183587 MsG0380012876.01.T01:CDS 40.0%
TTTCTTGCGTATGTCTATCG+AGG - Chr3:26183207-26183226 MsG0380012876.01.T01:intron 40.0%
! ATTTCGCGAAAACTAGCTCT+TGG - Chr3:26184623-26184642 MsG0380012876.01.T01:intron 40.0%
! GTCGCAAAATCCTGCATTTT+AGG + Chr3:26185195-26185214 None:intergenic 40.0%
!! ATTTTGACAACATTGGTCGG+TGG + Chr3:26185160-26185179 None:intergenic 40.0%
!! CAAGGGCATATGCAATTTTC+AGG - Chr3:26183418-26183437 MsG0380012876.01.T01:intron 40.0%
!! CCAAACGGACTACCTTATTT+GGG - Chr3:26182929-26182948 MsG0380012876.01.T01:intron 40.0%
!! GACTTTACTTCAGGTTGGAA+GGG + Chr3:26185485-26185504 None:intergenic 40.0%
!! GGGATTTTGACAACATTGGT+CGG + Chr3:26185163-26185182 None:intergenic 40.0%
AAGCTGTTCGTAGTTGGAAC+CGG - Chr3:26184505-26184524 MsG0380012876.01.T01:intron 45.0%
ATCTCTTATGCAGCGTAACG+GGG - Chr3:26184480-26184499 MsG0380012876.01.T01:intron 45.0%
ATGGCTGTAGTGGTAGAATG+TGG + Chr3:26181780-26181799 None:intergenic 45.0%
CAAAACCGGGACTTTACTTC+AGG + Chr3:26185494-26185513 None:intergenic 45.0%
CAGAAAGACCTTGTTAGCAG+AGG + Chr3:26182870-26182889 None:intergenic 45.0%
CATCTCTTATGCAGCGTAAC+GGG - Chr3:26184479-26184498 MsG0380012876.01.T01:intron 45.0%
CCATCTCTTATGCAGCGTAA+CGG - Chr3:26184478-26184497 MsG0380012876.01.T01:intron 45.0%
CCCAAATAAGGTAGTCCGTT+TGG + Chr3:26182932-26182951 None:intergenic 45.0%
CGACGTATCAGTGTCATGTT+TGG - Chr3:26185618-26185637 MsG0380012876.01.T01:CDS 45.0%
GAGCTCTATAACCAAGCTAG+TGG + Chr3:26182719-26182738 None:intergenic 45.0%
GCTGAGAAAGACATGGAAAC+CGG + Chr3:26181923-26181942 None:intergenic 45.0%
GGGAGATGAATGATTGAGCT+TGG + Chr3:26181861-26181880 None:intergenic 45.0%
GGTTGGAGTCCAGAAGATAA+AGG - Chr3:26185960-26185979 MsG0380012876.01.T01:CDS 45.0%
GGTTTCCATGTCTTTCTCAG+CGG - Chr3:26181922-26181941 MsG0380012876.01.T01:CDS 45.0%
GTAGCAACTGCTAACAGACT+TGG - Chr3:26183737-26183756 MsG0380012876.01.T01:intron 45.0%
GTGTGATGAGTGAACAAGTG+TGG + Chr3:26181746-26181765 None:intergenic 45.0%
GTGTGGTGAAATGTTGGAGA+AGG + Chr3:26181729-26181748 None:intergenic 45.0%
GTTGAAGGATGGAATACCTG+AGG + Chr3:26185044-26185063 None:intergenic 45.0%
GTTTCCATGTCTTTCTCAGC+GGG - Chr3:26181923-26181942 MsG0380012876.01.T01:CDS 45.0%
TAGAGCTCAACCAAGCTTCT+TGG - Chr3:26182731-26182750 MsG0380012876.01.T01:CDS 45.0%
TAGCTCTTGGTCCTTGCATA+TGG - Chr3:26184636-26184655 MsG0380012876.01.T01:intron 45.0%
TCCAACCTGAAGTAAAGTCC+CGG - Chr3:26185486-26185505 MsG0380012876.01.T01:CDS 45.0%
TGCCTTGATCAATGCACAGA+AGG - Chr3:26184933-26184952 MsG0380012876.01.T01:intron 45.0%
TGGTAGTAGTTAGCAACCTC+AGG - Chr3:26185025-26185044 MsG0380012876.01.T01:intron 45.0%
TTAAGAGAAACAGTGGGAGC+AGG + Chr3:26184088-26184107 None:intergenic 45.0%
TTGGAACCTTCCAAGAAGCT+TGG + Chr3:26182744-26182763 None:intergenic 45.0%
! AGCCTTCTGTGCATTGATCA+AGG + Chr3:26184938-26184957 None:intergenic 45.0%
! GCTACACTGGTTGAGATTAC+AGG + Chr3:26184991-26185010 None:intergenic 45.0%
! GGATTTGGCTGTTGCTGTTA+AGG - Chr3:26182099-26182118 MsG0380012876.01.T01:intron 45.0%
! GGTGCTATAGTGGTATGTGT+TGG - Chr3:26184405-26184424 MsG0380012876.01.T01:intron 45.0%
! GTGGATTTTGCTAGATGGGT+TGG - Chr3:26185943-26185962 MsG0380012876.01.T01:CDS 45.0%
! TTTGGCTGTTGCTGTTAAGG+CGG - Chr3:26182102-26182121 MsG0380012876.01.T01:intron 45.0%
!! AATATGAAGTGTCGGTGCCA+AGG + Chr3:26185521-26185540 None:intergenic 45.0%
!! CCCAAACGGACTACCTTATT+TGG - Chr3:26182928-26182947 MsG0380012876.01.T01:intron 45.0%
!! GGACTTTACTTCAGGTTGGA+AGG + Chr3:26185486-26185505 None:intergenic 45.0%
!! GTGGGTGGATTTTGCTAGAT+GGG - Chr3:26185939-26185958 MsG0380012876.01.T01:CDS 45.0%
!! TATTCGGACTTTTGAGGGGT+AGG - Chr3:26185121-26185140 MsG0380012876.01.T01:intron 45.0%
!!! AGTGCGGAGGTTTTTTGAGT+TGG - Chr3:26182144-26182163 MsG0380012876.01.T01:intron 45.0%
!!! AGTTTGTTTTGGCGTAGCCA+TGG + Chr3:26185766-26185785 None:intergenic 45.0%
!!! ATTTAGAATTAATTTTTTTT+GGG - Chr3:26185344-26185363 MsG0380012876.01.T01:intron 5.0%
ACAGCAACAGCCAAATCCGT+CGG + Chr3:26182097-26182116 None:intergenic 50.0%
ACCGGGACTTTACTTCAGGT+TGG + Chr3:26185490-26185509 None:intergenic 50.0%
AGGAGTCAGTTGTGTTCAGG+TGG - Chr3:26182167-26182186 MsG0380012876.01.T01:intron 50.0%
AGTCCAGCACTAATTGCAGG+AGG + Chr3:26184115-26184134 None:intergenic 50.0%
ATGTCTTTCTCAGCGGGCAA+TGG - Chr3:26181929-26181948 MsG0380012876.01.T01:CDS 50.0%
ATTGCCCGCTGAGAAAGACA+TGG + Chr3:26181930-26181949 None:intergenic 50.0%
CCGTTACGCTGCATAAGAGA+TGG + Chr3:26184481-26184500 None:intergenic 50.0%
CGTGTTTACCAGTGAAGCAC+CGG + Chr3:26184527-26184546 None:intergenic 50.0%
GATGCCATGCTGAACTATCG+AGG + Chr3:26183575-26183594 None:intergenic 50.0%
GCTCAACCAAGCTTCTTGGA+AGG - Chr3:26182735-26182754 MsG0380012876.01.T01:CDS 50.0%
GGTGCCAAGGTTGTCAAAAC+CGG + Chr3:26185508-26185527 None:intergenic 50.0%
GGTTTCTCAACAGGTGGCTT+TGG - Chr3:26184350-26184369 MsG0380012876.01.T01:intron 50.0%
GTCGCGTGTCAGACAGAAAT+TGG + Chr3:26182691-26182710 None:intergenic 50.0%
GTGCCAAGGTTGTCAAAACC+GGG + Chr3:26185507-26185526 None:intergenic 50.0%
TGGAGGAGTCAGTTGTGTTC+AGG - Chr3:26182164-26182183 MsG0380012876.01.T01:intron 50.0%
! GTCGATGGAGAGTTTTCCGA+CGG - Chr3:26182078-26182097 MsG0380012876.01.T01:intron 50.0%
! TTGGCTGTTGCTGTTAAGGC+GGG - Chr3:26182103-26182122 MsG0380012876.01.T01:intron 50.0%
!! AGAAGAGGCAATGCTGGTTC+TGG - Chr3:26182042-26182061 MsG0380012876.01.T01:intron 50.0%
!! AGCAACGGATTCTGGAACCA+TGG - Chr3:26185746-26185765 MsG0380012876.01.T01:CDS 50.0%
!! AGTCCCGGTTTTGACAACCT+TGG - Chr3:26185501-26185520 MsG0380012876.01.T01:CDS 50.0%
!! GGAGAGTTTTCCGACGGATT+TGG - Chr3:26182084-26182103 MsG0380012876.01.T01:intron 50.0%
!! GGCATGAAAGTTGGTGCAGT+GGG + Chr3:26181881-26181900 None:intergenic 50.0%
!! GGTGGGTGGATTTTGCTAGA+TGG - Chr3:26185938-26185957 MsG0380012876.01.T01:CDS 50.0%
!! TGGCATGAAAGTTGGTGCAG+TGG + Chr3:26181882-26181901 None:intergenic 50.0%
!! TTTTCAGGCAGCTGCAGAGT+TGG - Chr3:26183084-26183103 MsG0380012876.01.T01:intron 50.0%
!!! GCGGAGGTTTTTTGAGTTGG+AGG - Chr3:26182147-26182166 MsG0380012876.01.T01:intron 50.0%
AACCTCCGCACTATCGAACC+AGG + Chr3:26182136-26182155 None:intergenic 55.0%
AGTTGGAACCGGTGCTTCAC+TGG - Chr3:26184516-26184535 MsG0380012876.01.T01:intron 55.0%
CCAGCACTAATTGCAGGAGG+AGG + Chr3:26184112-26184131 None:intergenic 55.0%
CCTCCTCCTGCAATTAGTGC+TGG - Chr3:26184109-26184128 MsG0380012876.01.T01:intron 55.0%
GGGGCAAAGCTGTTCGTAGT+TGG - Chr3:26184499-26184518 MsG0380012876.01.T01:intron 55.0%
TCTTTCTCAGCGGGCAATGG+AGG - Chr3:26181932-26181951 MsG0380012876.01.T01:CDS 55.0%
! GGGTTCCTGGTTCGATAGTG+CGG - Chr3:26182128-26182147 MsG0380012876.01.T01:intron 55.0%
! TGGCTGTTGCTGTTAAGGCG+GGG - Chr3:26182104-26182123 MsG0380012876.01.T01:intron 55.0%
! TGTTGCTGTTAAGGCGGGGA+GGG - Chr3:26182108-26182127 MsG0380012876.01.T01:intron 55.0%
! TTCCTGGTTCGATAGTGCGG+AGG - Chr3:26182131-26182150 MsG0380012876.01.T01:intron 55.0%
!! AACTTCATGGCGGGCTGTGA+TGG + Chr3:26181822-26181841 None:intergenic 55.0%
!! ATGCTGGTTCTGGCTGAGAC+TGG - Chr3:26182052-26182071 MsG0380012876.01.T01:intron 55.0%
!! TCTCAACAGGTGGCTTTGGC+AGG - Chr3:26184354-26184373 MsG0380012876.01.T01:intron 55.0%
!! TGGTTCTGGCTGAGACTGGA+AGG - Chr3:26182056-26182075 MsG0380012876.01.T01:intron 55.0%
AGGCAGCTGCAGAGTTGGAG+CGG - Chr3:26183089-26183108 MsG0380012876.01.T01:intron 60.0%
CGCGACAGTGTCCACTAGCT+TGG - Chr3:26182705-26182724 MsG0380012876.01.T01:CDS 60.0%
GGCTGAGACTGGAAGGTCGA+TGG - Chr3:26182063-26182082 MsG0380012876.01.T01:intron 60.0%
TTCTCAGCGGGCAATGGAGG+CGG - Chr3:26181935-26181954 MsG0380012876.01.T01:CDS 60.0%
TTTCCAGGGAGTGGAGGTGG+TGG - Chr3:26181959-26181978 MsG0380012876.01.T01:CDS 60.0%
! CGGGCTGTGATGGTGTAGCT+TGG + Chr3:26181812-26181831 None:intergenic 60.0%
! CTGTTGCTGTTAAGGCGGGG+AGG - Chr3:26182107-26182126 MsG0380012876.01.T01:intron 60.0%
! GCAATGGAGGCGGGTTTCCA+GGG - Chr3:26181945-26181964 MsG0380012876.01.T01:CDS 60.0%
!! AGGTGGTGGTGATGGTGGTG+GGG - Chr3:26181973-26181992 MsG0380012876.01.T01:intron 60.0%
!! AGTGGAGGTGGTGGTGATGG+TGG - Chr3:26181968-26181987 MsG0380012876.01.T01:intron 60.0%
!! GAGGTGGTGGTGATGGTGGT+GGG - Chr3:26181972-26181991 MsG0380012876.01.T01:intron 60.0%
GGGTCTCCTCACGCCCCAAA+CGG - Chr3:26182914-26182933 MsG0380012876.01.T01:intron 65.0%
GGGTTTCCAGGGAGTGGAGG+TGG - Chr3:26181956-26181975 MsG0380012876.01.T01:CDS 65.0%
GTTAAGGCGGGGAGGGTTCC+TGG - Chr3:26182115-26182134 MsG0380012876.01.T01:intron 65.0%
TCACCACCACCTCCACTCCC+TGG + Chr3:26181965-26181984 None:intergenic 65.0%
TCTCAGCGGGCAATGGAGGC+GGG - Chr3:26181936-26181955 MsG0380012876.01.T01:CDS 65.0%
! GGCAATGGAGGCGGGTTTCC+AGG - Chr3:26181944-26181963 MsG0380012876.01.T01:CDS 65.0%
! GGGAGTGGAGGTGGTGGTGA+TGG - Chr3:26181965-26181984 MsG0380012876.01.T01:intron 65.0%
! GGTAGTCCGTTTGGGGCGTG+AGG + Chr3:26182923-26182942 None:intergenic 65.0%
!! GGAGGTGGTGGTGATGGTGG+TGG - Chr3:26181971-26181990 MsG0380012876.01.T01:intron 65.0%
!! GGTGGTGGTGATGGTGGTGG+GGG - Chr3:26181974-26181993 MsG0380012876.01.T01:intron 65.0%
!! GTGGTGGTGATGGTGGTGGG+GGG - Chr3:26181975-26181994 MsG0380012876.01.T01:intron 65.0%
!! TGGTGGTGATGGTGGTGGGG+GGG - Chr3:26181976-26181995 MsG0380012876.01.T01:intron 65.0%
CGACGGTGGAGGTGGGGAAG+AGG - Chr3:26182000-26182019 MsG0380012876.01.T01:intron 70.0%
! GGAGGCGGGTTTCCAGGGAG+TGG - Chr3:26181950-26181969 MsG0380012876.01.T01:CDS 70.0%
! GGCGGGTTTCCAGGGAGTGG+AGG - Chr3:26181953-26181972 MsG0380012876.01.T01:CDS 70.0%
!! GATGGTGGTGGGGGGGACGA+CGG - Chr3:26181983-26182002 MsG0380012876.01.T01:intron 70.0%
GGGGGACGACGGTGGAGGTG+GGG - Chr3:26181994-26182013 MsG0380012876.01.T01:intron 75.0%
GGGGGGACGACGGTGGAGGT+GGG - Chr3:26181993-26182012 MsG0380012876.01.T01:intron 75.0%
! GGGGGGGACGACGGTGGAGG+TGG - Chr3:26181992-26182011 MsG0380012876.01.T01:intron 80.0%
! GGTGGGGGGGACGACGGTGG+AGG - Chr3:26181989-26182008 MsG0380012876.01.T01:intron 80.0%
!!! GGTGGTGGGGGGGACGACGG+TGG - Chr3:26181986-26182005 MsG0380012876.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 26181713 26185987 26181713 ID=MsG0380012876.01;Name=MsG0380012876.01
Chr3 mRNA 26181713 26185987 26181713 ID=MsG0380012876.01.T01;Parent=MsG0380012876.01;Name=MsG0380012876.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0|0|1|1|1|7|0|375
Chr3 exon 26185415 26185987 26185415 ID=MsG0380012876.01.T01:exon:14215;Parent=MsG0380012876.01.T01
Chr3 exon 26184541 26184609 26184541 ID=MsG0380012876.01.T01:exon:14214;Parent=MsG0380012876.01.T01
Chr3 exon 26183523 26183654 26183523 ID=MsG0380012876.01.T01:exon:14213;Parent=MsG0380012876.01.T01
Chr3 exon 26183163 26183207 26183163 ID=MsG0380012876.01.T01:exon:14212;Parent=MsG0380012876.01.T01
Chr3 exon 26182654 26182787 26182654 ID=MsG0380012876.01.T01:exon:14211;Parent=MsG0380012876.01.T01
Chr3 exon 26181855 26181980 26181855 ID=MsG0380012876.01.T01:exon:14210;Parent=MsG0380012876.01.T01
Chr3 exon 26181713 26181761 26181713 ID=MsG0380012876.01.T01:exon:14209;Parent=MsG0380012876.01.T01
Chr3 CDS 26185415 26185987 26185415 ID=MsG0380012876.01.T01:cds;Parent=MsG0380012876.01.T01
Chr3 CDS 26184541 26184609 26184541 ID=MsG0380012876.01.T01:cds;Parent=MsG0380012876.01.T01
Chr3 CDS 26183523 26183654 26183523 ID=MsG0380012876.01.T01:cds;Parent=MsG0380012876.01.T01
Chr3 CDS 26183163 26183207 26183163 ID=MsG0380012876.01.T01:cds;Parent=MsG0380012876.01.T01
Chr3 CDS 26182654 26182787 26182654 ID=MsG0380012876.01.T01:cds;Parent=MsG0380012876.01.T01
Chr3 CDS 26181855 26181980 26181855 ID=MsG0380012876.01.T01:cds;Parent=MsG0380012876.01.T01
Chr3 CDS 26181713 26181761 26181713 ID=MsG0380012876.01.T01:cds;Parent=MsG0380012876.01.T01
Gene Sequence

>MsG0380012876.01.T01

ATGGCTATGGCTTCCTTCTCCAACATTTCACCACACTTGTTCACTCATCACACTCACACTCAAACCACATTCTACCACTACAGCCATTCTTCTTTACCAAGCTACACCATCACAGCCCGCCATGAAGTTTCTAAATTCTTCTCTTCCAAGCTCAATCATTCATCTCCCACTGCACCAACTTTCATGCCAAATCATTTGCATCATTCTCCGGTTTCCATGTCTTTCTCAGCGGGCAATGGAGGCGGGTTTCCAGGGAGTGGAGGTGGTGGTGATGGTGGTGGGGGGGACGACGGTGGAGGTGGGGAAGAGGAAGAAAGAGATAGAAATAGAGAAGAGGCAATGCTGGTTCTGGCTGAGACTGGAAGGTCGATGGAGAGTTTTCCGACGGATTTGGCTGTTGCTGTTAAGGCGGGGAGGGTTCCTGGTTCGATAGTGCGGAGGTTTTTTGAGTTGGAGGAGTCAGTTGTGTTCAGGTGGCTGTTAAAATTTGGAGGGTTTAAGGAAAGGTTGTTGGCTGATGATTTGTTCTTAACTAAGCTTGTTATGGAATGTGTTGTTGTTATCTTCACCAAGGCAGCTGCAGAGTTGGAGCGGCGTAAAGAAAATTTCACTAAAGAGATGGATTTTGTTGTTGCTAATGTGGTAACAGGCATAGTAACAGGTTTTGTACTAGTTTGGTTTCCTGCTCCCACTGTTTCTCTTAAACCTCCTCCTGCAATTAGTGCTGGACTTATTGCCAAATTCTTCTATGGATGTCCTGAAAATGCTTTTCAGCGTAACGGGGCAAAGCTGTTCGTAGTTGGAACCGGTGCTTCACTGGTTGGTATAGGTATAACAAATGCCTTGATCAATGCACAGAAGGCTGTAAATAAAGCATTTACCGTTGAGAATTTACCTGTAATCTCAACCAGTGTAGCATATGGGATTTACATGGTAGTAGTTAGCAACCTCAGGTATCAAGTACTAGCAGGAATTATTGAGCAACGGATTCTGGAACCATGGCTACGCCAAAACAAACTTATACTAACTGGAGCATACTTTATTATCAGAACTGCTAATACTTATTGGGGCTCACTACTGTGGGTGGATTTTGCTAGATGGGTTGGAGTCCAGAAGATAAAGGCTTAA

Protein sequence

>MsG0380012876.01.T01

MAMASFSNISPHLFTHHTHTQTTFYHYSHSSLPSYTITARHEVSKFFSSKLNHSSPTAPTFMPNHLHHSPVSMSFSAGNGGGFPGSGGGGDGGGGDDGGGGEEEERDRNREEAMLVLAETGRSMESFPTDLAVAVKAGRVPGSIVRRFFELEESVVFRWLLKFGGFKERLLADDLFLTKLVMECVVVIFTKAAAELERRKENFTKEMDFVVANVVTGIVTGFVLVWFPAPTVSLKPPPAISAGLIAKFFYGCPENAFQRNGAKLFVVGTGASLVGIGITNALINAQKAVNKAFTVENLPVISTSVAYGIYMVVVSNLRYQVLAGIIEQRILEPWLRQNKLILTGAYFIIRTANTYWGSLLWVDFARWVGVQKIKA*