AlfalfaGEDB | MsG0380013984.01

M. sativa cultivar ZhongmuNo.1 / MsG0380013984.01

KEGG: -
GO: -
PFAM: PF10839

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013984.01.T01	AES86351.1	98.925	93	1	0	6	98	145	237	1.48E-59	192

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013984.01.T01	P03938	83.607	61	8	1	37	97	51	109	1.26E-27	100

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013984.01.T01	G7JVL4	98.925	93	1	0	6	98	145	237	7.07e-60	192

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048059.01	MsG0380013984.01	0.800870	1.176679e-48	5.539422e-46
MsG0080048652.01	MsG0380013984.01	-0.802199	6.283459e-49	3.059113e-46
MsG0080048692.01	MsG0380013984.01	0.820493	6.661577e-53	5.279007e-50
MsG0080048693.01	MsG0380013984.01	0.810837	9.452346e-51	5.758915e-48
MsG0080048694.01	MsG0380013984.01	0.852887	3.436331e-61	7.287575e-58
MsG0080048695.01	MsG0380013984.01	0.853292	2.632387e-61	5.659701e-58
MsG0080048697.01	MsG0380013984.01	0.869500	2.956693e-66	1.112247e-62
MsG0080048978.01	MsG0380013984.01	0.800052	1.726604e-48	7.961116e-46
MsG0080049019.01	MsG0380013984.01	0.804433	2.165547e-49	1.116393e-46
MsG0080049076.01	MsG0380013984.01	0.834365	3.126597e-56	3.702437e-53
MsG0080049077.01	MsG0380013984.01	0.808994	2.356041e-50	1.366953e-47
MsG0180000467.01	MsG0380013984.01	0.809177	2.152857e-50	1.255237e-47
MsG0180001507.01	MsG0380013984.01	0.963467	4.031421e-122	2.183801e-116
MsG0180001919.01	MsG0380013984.01	0.809900	1.505624e-50	8.948620e-48
MsG0180002099.01	MsG0380013984.01	0.801199	1.008013e-48	4.784905e-46
MsG0180002214.01	MsG0380013984.01	0.801454	8.935490e-49	4.269004e-46
MsG0180002227.01	MsG0380013984.01	0.822661	2.102204e-53	1.770803e-50
MsG0180002439.01	MsG0380013984.01	0.892725	1.217806e-74	1.126530e-70
MsG0180002546.01	MsG0380013984.01	0.819153	1.348361e-52	1.029385e-49
MsG0180003779.01	MsG0380013984.01	0.816892	4.373746e-52	3.137940e-49
MsG0180003985.01	MsG0380013984.01	0.813151	2.959616e-51	1.917600e-48
MsG0180004124.01	MsG0380013984.01	0.804180	2.445087e-49	1.252346e-46
MsG0180004177.01	MsG0380013984.01	0.803085	4.124469e-49	2.053837e-46
MsG0180004226.01	MsG0380013984.01	0.800541	1.373170e-48	6.410527e-46
MsG0180004322.01	MsG0380013984.01	0.807650	4.556595e-50	2.551917e-47
MsG0180004553.01	MsG0380013984.01	0.814447	1.533717e-51	1.029367e-48
MsG0180004586.01	MsG0380013984.01	0.816401	5.635867e-52	3.989477e-49
MsG0180005817.01	MsG0380013984.01	0.803035	4.224602e-49	2.101059e-46
MsG0180006212.01	MsG0380013984.01	0.803114	4.067958e-49	2.027242e-46
MsG0280011301.01	MsG0380013984.01	0.800584	1.345844e-48	6.289884e-46
MsG0380012065.01	MsG0380013984.01	0.807774	4.288548e-50	2.409623e-47
MsG0380012281.01	MsG0380013984.01	0.809332	1.993766e-50	1.167315e-47
MsG0380013506.01	MsG0380013984.01	0.802783	4.762438e-49	2.353564e-46
MsG0380013888.01	MsG0380013984.01	0.809968	1.455259e-50	8.665056e-48
MsG0380013890.01	MsG0380013984.01	0.925590	1.493035e-90	6.711229e-86
MsG0380013891.01	MsG0380013984.01	0.887405	1.468738e-72	1.090719e-68
MsG0380013892.01	MsG0380013984.01	0.892286	1.826685e-74	1.658406e-70
MsG0380013914.01	MsG0380013984.01	0.802451	5.575404e-49	2.732017e-46
MsG0380013921.01	MsG0380013984.01	0.802105	6.568310e-49	3.190276e-46
MsG0380013925.01	MsG0380013984.01	0.861222	1.194184e-63	3.354055e-60
MsG0380013926.01	MsG0380013984.01	0.813227	2.848352e-51	1.849306e-48
MsG0380013928.01	MsG0380013984.01	0.851169	1.057198e-60	2.121140e-57
MsG0380013938.01	MsG0380013984.01	0.811504	6.773818e-51	4.200507e-48
MsG0380013940.01	MsG0380013984.01	0.838573	2.653394e-57	3.568744e-54
MsG0380013941.01	MsG0380013984.01	0.801200	1.007408e-48	4.782229e-46
MsG0380013943.01	MsG0380013984.01	0.843476	1.368415e-58	2.143575e-55
MsG0380013945.01	MsG0380013984.01	0.835574	1.549929e-56	1.903019e-53
MsG0380013953.01	MsG0380013984.01	0.819846	9.371350e-53	7.294218e-50
MsG0380013954.01	MsG0380013984.01	0.823976	1.036449e-53	9.060951e-51
MsG0380013956.01	MsG0380013984.01	0.839195	1.831830e-57	2.510915e-54
MsG0380013957.01	MsG0380013984.01	0.832507	9.086198e-56	1.017699e-52
MsG0380013961.01	MsG0380013984.01	0.820111	8.151452e-53	6.392728e-50
MsG0380013962.01	MsG0380013984.01	0.821699	3.514971e-53	2.880688e-50
MsG0380013966.01	MsG0380013984.01	0.824769	6.743859e-54	6.031424e-51
MsG0380013967.01	MsG0380013984.01	0.832950	7.056440e-56	8.008418e-53
MsG0380013971.01	MsG0380013984.01	0.845090	5.045321e-59	8.314804e-56
MsG0380013975.01	MsG0380013984.01	0.856232	3.697224e-62	8.763554e-59
MsG0380013977.01	MsG0380013984.01	0.839367	1.653655e-57	2.278675e-54
MsG0380013984.01	MsG0380013985.01	0.885977	5.104012e-72	3.577347e-68
MsG0380013984.01	MsG0380013986.01	0.911170	8.232230e-83	1.741992e-78
MsG0380013984.01	MsG0380013997.01	0.895189	1.214217e-75	1.246313e-71
MsG0380013984.01	MsG0380013999.01	0.818243	2.169987e-52	1.615500e-49
MsG0380013984.01	MsG0380014005.01	0.826613	2.464442e-54	2.322686e-51
MsG0380013984.01	MsG0380014006.01	0.819443	1.158282e-52	8.914750e-50
MsG0380013984.01	MsG0380014016.01	0.894675	1.973328e-75	1.981804e-71
MsG0380013984.01	MsG0380014017.01	0.815591	8.548989e-52	5.918893e-49
MsG0380013984.01	MsG0380014021.01	0.822279	2.578657e-53	2.148638e-50
MsG0380013984.01	MsG0380014023.01	0.800225	1.592584e-48	7.375534e-46
MsG0380013984.01	MsG0380014024.01	0.873384	1.533366e-67	6.641295e-64
MsG0380013984.01	MsG0380014026.01	0.825562	4.381300e-54	4.007503e-51
MsG0380013984.01	MsG0380014027.01	0.805157	1.528820e-49	8.030110e-47
MsG0380013984.01	MsG0380014029.01	0.858214	9.602800e-63	2.432328e-59
MsG0380013984.01	MsG0380014032.01	0.829963	3.834718e-55	3.985219e-52
MsG0380013984.01	MsG0380014033.01	0.817118	3.891908e-52	2.809517e-49
MsG0380013984.01	MsG0380014054.01	0.810477	1.130573e-50	6.821955e-48
MsG0380013984.01	MsG0380014410.01	-0.802948	4.402893e-49	2.184895e-46
MsG0380013984.01	MsG0380015271.01	0.821965	3.050366e-53	2.518800e-50
MsG0380013984.01	MsG0380015348.01	0.807348	5.280458e-50	2.934311e-47
MsG0380013984.01	MsG0380015439.01	0.812197	4.784583e-51	3.022551e-48
MsG0380013984.01	MsG0380015619.01	0.809340	1.986338e-50	1.163207e-47
MsG0380013984.01	MsG0380015985.01	0.834242	3.356529e-56	3.959962e-53
MsG0380013984.01	MsG0380016241.01	0.805050	1.609554e-49	8.430962e-47
MsG0380013984.01	MsG0380016424.01	0.825082	5.691088e-54	5.135270e-51
MsG0380013984.01	MsG0380016531.01	0.810846	9.408113e-51	5.733420e-48
MsG0380013984.01	MsG0380016790.01	0.820074	8.311050e-53	6.510772e-50
MsG0380013984.01	MsG0380016931.01	0.812355	4.420584e-51	2.804555e-48
MsG0380013984.01	MsG0380016934.01	0.807888	4.057061e-50	2.286245e-47
MsG0380013984.01	MsG0380016935.01	0.806559	7.757098e-50	4.223440e-47
MsG0380013984.01	MsG0380016960.01	0.809079	2.259051e-50	1.313704e-47
MsG0380013984.01	MsG0380017141.01	0.802777	4.776716e-49	2.360266e-46
MsG0380013984.01	MsG0380017405.01	0.803952	2.727148e-49	1.388758e-46
MsG0380013984.01	MsG0380017406.01	0.813229	2.845095e-51	1.847308e-48
MsG0380013984.01	MsG0380017895.01	0.810443	1.149802e-50	6.931641e-48
MsG0380013984.01	MsG0380017962.01	0.809656	1.698952e-50	1.003344e-47
MsG0380013984.01	MsG0380018072.01	0.816374	5.716000e-52	4.043182e-49
MsG0380013984.01	MsG0480018296.01	0.803631	3.179800e-49	1.605840e-46
MsG0380013984.01	MsG0480019028.01	0.900650	5.926445e-78	7.735950e-74
MsG0380013984.01	MsG0480020051.01	0.896951	2.252743e-76	2.490895e-72
MsG0380013984.01	MsG0480020052.01	0.823509	1.333386e-53	1.150404e-50
MsG0380013984.01	MsG0480021205.01	0.811739	6.021840e-51	3.757318e-48
MsG0380013984.01	MsG0480021912.01	0.809607	1.740745e-50	1.026713e-47
MsG0380013984.01	MsG0480022459.01	0.813730	2.208134e-51	1.453479e-48
MsG0380013984.01	MsG0480023993.01	0.810887	9.216953e-51	5.623221e-48
MsG0380013984.01	MsG0580024309.01	0.815391	9.467782e-52	6.519233e-49
MsG0380013984.01	MsG0580024493.01	0.808356	3.224197e-50	1.839694e-47
MsG0380013984.01	MsG0580024678.01	0.805759	1.143076e-49	6.098020e-47
MsG0380013984.01	MsG0580025105.01	0.806964	6.368211e-50	3.503565e-47
MsG0380013984.01	MsG0580025392.01	0.816699	4.834068e-52	3.449779e-49
MsG0380013984.01	MsG0580027095.01	0.810351	1.203562e-50	7.238217e-48
MsG0380013984.01	MsG0580027641.01	-0.803238	3.834887e-49	1.917214e-46
MsG0380013984.01	MsG0580027677.01	0.854034	1.609818e-61	3.548415e-58
MsG0380013984.01	MsG0680030439.01	0.818826	1.600480e-52	1.210928e-49
MsG0380013984.01	MsG0680030961.01	-0.829789	4.228151e-55	4.372636e-52
MsG0380013984.01	MsG0680031813.01	0.801843	7.435148e-49	3.587451e-46
MsG0380013984.01	MsG0780036064.01	0.822311	2.535667e-53	2.114723e-50
MsG0380013984.01	MsG0780036068.01	0.838425	2.897230e-57	3.879091e-54
MsG0380013984.01	MsG0780037988.01	0.804063	2.586171e-49	1.320718e-46
MsG0380013984.01	MsG0780038047.01	0.804952	1.686997e-49	8.814959e-47
MsG0380013984.01	MsG0780038573.01	0.803417	3.521201e-49	1.768540e-46
MsG0380013984.01	MsG0780039821.01	0.801303	9.595597e-49	4.566985e-46
MsG0380013984.01	MsG0780039860.01	0.815564	8.665920e-52	5.995506e-49
MsG0380013984.01	MsG0780040121.01	0.824257	8.903581e-54	7.845289e-51
MsG0380013984.01	MsG0780041007.01	0.813583	2.378591e-51	1.559435e-48
MsG0380013984.01	MsG0780041079.01	-0.801007	1.102953e-48	5.210804e-46
MsG0380013984.01	MsG0780041106.01	0.814714	1.338594e-51	9.049077e-49
MsG0380013984.01	MsG0780041173.01	0.800006	1.764671e-48	8.127007e-46
MsG0380013984.01	MsG0780041478.01	0.811382	7.201389e-51	4.451023e-48
MsG0380013984.01	MsG0780041783.01	0.813131	2.989452e-51	1.935884e-48
MsG0380013984.01	MsG0780041809.01	0.801468	8.877274e-49	4.242664e-46
MsG0380013984.01	MsG0880041855.01	0.801856	7.391000e-49	3.567311e-46
MsG0380013984.01	MsG0880043069.01	0.813675	2.270320e-51	1.492195e-48
MsG0380013984.01	MsG0880043364.01	-0.808812	2.576747e-50	1.487769e-47
MsG0380013984.01	MsG0880044312.01	0.809278	2.047804e-50	1.197235e-47
MsG0380013984.01	MsG0880045188.01	0.807477	4.959371e-50	2.765122e-47
MsG0380013984.01	MsG0880045274.01	0.811319	7.429062e-51	4.584037e-48
MsG0380013984.01	MsG0880045385.01	0.802424	5.647568e-49	2.765602e-46
MsG0380013984.01	MsG0880045778.01	0.803831	2.889558e-49	1.466835e-46
MsG0380013984.01	MsG0880046150.01	0.811441	6.991493e-51	4.328280e-48
MsG0380013984.01	MsG0880046219.01	0.804608	1.990947e-49	1.031037e-46
MsG0380013984.01	MsG0880046469.01	0.801374	9.281759e-49	4.425451e-46
MsG0380013984.01	MsG0880046863.01	-0.803671	3.119174e-49	1.576811e-46
MsG0380013984.01	MsG0880047318.01	0.821250	4.461659e-53	3.610744e-50
MsG0380013984.01	MsG0880047628.01	0.817513	3.171870e-52	2.314753e-49
MsG0380013984.01	MsG0880047661.01	0.807787	4.262196e-50	2.395628e-47
MsG0280007233.01	MsG0380013984.01	0.825109	5.608238e-54	5.064147e-51
MsG0280007759.01	MsG0380013984.01	-0.819605	1.063876e-52	8.224810e-50
MsG0280007760.01	MsG0380013984.01	-0.813379	2.637177e-51	1.719504e-48
MsG0280007786.01	MsG0380013984.01	-0.800094	1.693127e-48	7.815157e-46
MsG0280009776.01	MsG0380013984.01	0.809406	1.921906e-50	1.127509e-47
MsG0280010142.01	MsG0380013984.01	0.863589	2.235093e-64	6.811143e-61
MsG0280010143.01	MsG0380013984.01	0.867522	1.286417e-65	4.504510e-62
MsG0280010144.01	MsG0380013984.01	0.879024	1.746487e-69	9.322688e-66

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013984.01.T01	MTR_4g006040	98.925	93	1	0	6	98	145	237	1.79e-63	192

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 39 sgRNAs with CRISPR-Local

Find 40 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGAGATCACCTCTTTCATTC+TGG	0.220450	3:+48574591	MsG0380013984.01.T01:CDS
TCGTGGGATCCGGGCGGTCC+AGG	0.255275	3:+48574418	MsG0380013984.01.T01:CDS
GAGGATAGATGGGGCGATTC+AGG	0.280696	3:+48574362	MsG0380013984.01.T01:CDS
TTCTATTCACTCGTGGGATC+CGG	0.285661	3:+48574408	MsG0380013984.01.T01:CDS
ATATATCCCTTATCAGTATA+TGG	0.331456	3:+48574476	MsG0380013984.01.T01:CDS
TATCTCTCGAGCACAGGTTT+AGG	0.344757	3:+48574504	MsG0380013984.01.T01:CDS
CTTCTCCTCAGGAGGATAGA+TGG	0.346630	3:+48574351	MsG0380013984.01.T01:CDS
TATCCTCCTGAGGAGAAGTT+TGG	0.356300	3:-48574346	None:intergenic
GAGATCACCTCTTTCATTCT+GGG	0.384850	3:+48574592	MsG0380013984.01.T01:CDS
GTGGGATCCGGGCGGTCCAG+GGG	0.385871	3:+48574420	MsG0380013984.01.T01:CDS
TGGGATCCGGGCGGTCCAGG+GGG	0.394291	3:+48574421	MsG0380013984.01.T01:CDS
CTCGAGCACAGGTTTAGGTT+TGG	0.395333	3:+48574509	MsG0380013984.01.T01:CDS
CGTGGGATCCGGGCGGTCCA+GGG	0.409711	3:+48574419	MsG0380013984.01.T01:CDS
AGAGGTGATCTCGTAGTTCT+TGG	0.431705	3:-48574581	None:intergenic
TTCTCCTCAGGAGGATAGAT+GGG	0.436019	3:+48574352	MsG0380013984.01.T01:CDS
TTTCATTCTGGGGTGACGGC+GGG	0.437684	3:+48574603	MsG0380013984.01.T01:CDS
AGCTGTCCATATACTGATAA+GGG	0.448121	3:-48574482	None:intergenic
TAGCTGTCCATATACTGATA+AGG	0.448263	3:-48574483	None:intergenic
TTGAAACCAAACTTCTCCTC+AGG	0.463068	3:+48574340	None:intergenic
TCTATTCACTCGTGGGATCC+GGG	0.481377	3:+48574409	MsG0380013984.01.T01:CDS
GTCTGTGAAGATACGTTGTT+AGG	0.494777	3:-48574559	None:intergenic
GGGATCCGGGCGGTCCAGGG+GGG	0.502113	3:+48574422	MsG0380013984.01.T01:CDS
CCCACGAGTGAATAGAAAGT+TGG	0.515787	3:-48574402	None:intergenic
GACAGCTATCTCTCGAGCAC+AGG	0.526610	3:+48574498	MsG0380013984.01.T01:CDS
TCCAACTTTCTATTCACTCG+TGG	0.529895	3:+48574401	MsG0380013984.01.T01:CDS
CTTTCATTCTGGGGTGACGG+CGG	0.540721	3:+48574602	MsG0380013984.01.T01:CDS
CGAGAGGAGAGGAGCCATGA+TGG	0.546958	3:-48574446	None:intergenic
CCGTCACCCCAGAATGAAAG+AGG	0.549518	3:-48574599	None:intergenic
CCTCTTTCATTCTGGGGTGA+CGG	0.551798	3:+48574599	MsG0380013984.01.T01:CDS
CCCATTTCGAGTCAAGAGAA+TGG	0.558119	3:-48574632	None:intergenic
ATAGAAAGTTGGATCTACAT+TGG	0.570959	3:-48574391	None:intergenic
AAACCAAACTTCTCCTCAGG+AGG	0.577461	3:+48574343	None:intergenic
CCAACTTTCTATTCACTCGT+GGG	0.591847	3:+48574402	MsG0380013984.01.T01:CDS
AGATCACCTCTTTCATTCTG+GGG	0.626680	3:+48574593	MsG0380013984.01.T01:CDS
ATATGAATTCTCGAGAGGAG+AGG	0.651842	3:-48574457	None:intergenic
GGGATATATGAATTCTCGAG+AGG	0.654907	3:-48574462	None:intergenic
TCGCCCCATCTATCCTCCTG+AGG	0.661903	3:-48574356	None:intergenic
TCTCCTCAGGAGGATAGATG+GGG	0.682857	3:+48574353	MsG0380013984.01.T01:CDS
ATTCACTCGTGGGATCCGGG+CGG	0.763324	3:+48574412	MsG0380013984.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATATATCCCTTATCAGTATA+TGG	+	Chr3:48574476-48574495	MsG0380013984.01.T01:CDS	25.0%
!	CCTCAATAGAAAAAGAAAAA+CGG	+	Chr3:48574532-48574551	MsG0380013984.01.T01:CDS	25.0%
	ATAGAAAGTTGGATCTACAT+TGG	-	Chr3:48574394-48574413	None:intergenic	30.0%
!!	CCGTTTTTCTTTTTCTATTG+AGG	-	Chr3:48574535-48574554	None:intergenic	30.0%
	AGCTGTCCATATACTGATAA+GGG	-	Chr3:48574485-48574504	None:intergenic	35.0%
	TAGCTGTCCATATACTGATA+AGG	-	Chr3:48574486-48574505	None:intergenic	35.0%
	AGATCACCTCTTTCATTCTG+GGG	+	Chr3:48574593-48574612	MsG0380013984.01.T01:CDS	40.0%
	ATATGAATTCTCGAGAGGAG+AGG	-	Chr3:48574460-48574479	None:intergenic	40.0%
	CCAACTTTCTATTCACTCGT+GGG	+	Chr3:48574402-48574421	MsG0380013984.01.T01:CDS	40.0%
	GAGATCACCTCTTTCATTCT+GGG	+	Chr3:48574592-48574611	MsG0380013984.01.T01:CDS	40.0%
	GGGATATATGAATTCTCGAG+AGG	-	Chr3:48574465-48574484	None:intergenic	40.0%
	GTCTGTGAAGATACGTTGTT+AGG	-	Chr3:48574562-48574581	None:intergenic	40.0%
	TCCAACTTTCTATTCACTCG+TGG	+	Chr3:48574401-48574420	MsG0380013984.01.T01:CDS	40.0%
	AGAGGTGATCTCGTAGTTCT+TGG	-	Chr3:48574584-48574603	None:intergenic	45.0%
	CCCACGAGTGAATAGAAAGT+TGG	-	Chr3:48574405-48574424	None:intergenic	45.0%
	CGAGATCACCTCTTTCATTC+TGG	+	Chr3:48574591-48574610	MsG0380013984.01.T01:CDS	45.0%
	TATCTCTCGAGCACAGGTTT+AGG	+	Chr3:48574504-48574523	MsG0380013984.01.T01:CDS	45.0%
	TTCTATTCACTCGTGGGATC+CGG	+	Chr3:48574408-48574427	MsG0380013984.01.T01:CDS	45.0%
	TTCTCCTCAGGAGGATAGAT+GGG	+	Chr3:48574352-48574371	MsG0380013984.01.T01:CDS	45.0%
	CTTCTCCTCAGGAGGATAGA+TGG	+	Chr3:48574351-48574370	MsG0380013984.01.T01:CDS	50.0%
	TCTATTCACTCGTGGGATCC+GGG	+	Chr3:48574409-48574428	MsG0380013984.01.T01:CDS	50.0%
	TCTCCTCAGGAGGATAGATG+GGG	+	Chr3:48574353-48574372	MsG0380013984.01.T01:CDS	50.0%
!	CTCGAGCACAGGTTTAGGTT+TGG	+	Chr3:48574509-48574528	MsG0380013984.01.T01:CDS	50.0%
!!	CCTCTTTCATTCTGGGGTGA+CGG	+	Chr3:48574599-48574618	MsG0380013984.01.T01:CDS	50.0%
	CCGTCACCCCAGAATGAAAG+AGG	-	Chr3:48574602-48574621	None:intergenic	55.0%
	GACAGCTATCTCTCGAGCAC+AGG	+	Chr3:48574498-48574517	MsG0380013984.01.T01:CDS	55.0%
	GAGGATAGATGGGGCGATTC+AGG	+	Chr3:48574362-48574381	MsG0380013984.01.T01:CDS	55.0%
!!	CTTTCATTCTGGGGTGACGG+CGG	+	Chr3:48574602-48574621	MsG0380013984.01.T01:CDS	55.0%
!!	TTTCATTCTGGGGTGACGGC+GGG	+	Chr3:48574603-48574622	MsG0380013984.01.T01:CDS	55.0%
	ATTCACTCGTGGGATCCGGG+CGG	+	Chr3:48574412-48574431	MsG0380013984.01.T01:CDS	60.0%
	CGAGAGGAGAGGAGCCATGA+TGG	-	Chr3:48574449-48574468	None:intergenic	60.0%
	TCGCCCCATCTATCCTCCTG+AGG	-	Chr3:48574359-48574378	None:intergenic	60.0%
	CGGTCCAGGGGGGACCATCA+TGG	+	Chr3:48574432-48574451	MsG0380013984.01.T01:CDS	70.0%
	GGAGCCATGATGGTCCCCCC+TGG	-	Chr3:48574439-48574458	None:intergenic	70.0%
	ATGGTCCCCCCTGGACCGCC+CGG	-	Chr3:48574430-48574449	None:intergenic	75.0%
	CGTGGGATCCGGGCGGTCCA+GGG	+	Chr3:48574419-48574438	MsG0380013984.01.T01:CDS	75.0%
	GTGGGATCCGGGCGGTCCAG+GGG	+	Chr3:48574420-48574439	MsG0380013984.01.T01:CDS	75.0%
	TCGTGGGATCCGGGCGGTCC+AGG	+	Chr3:48574418-48574437	MsG0380013984.01.T01:CDS	75.0%
	TGGGATCCGGGCGGTCCAGG+GGG	+	Chr3:48574421-48574440	MsG0380013984.01.T01:CDS	75.0%
!	GGGATCCGGGCGGTCCAGGG+GGG	+	Chr3:48574422-48574441	MsG0380013984.01.T01:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	48574347	48574643	48574347	ID=MsG0380013984.01;Name=MsG0380013984.01
Chr3	mRNA	48574347	48574643	48574347	ID=MsG0380013984.01.T01;Parent=MsG0380013984.01;Name=MsG0380013984.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|98
Chr3	exon	48574347	48574643	48574347	ID=MsG0380013984.01.T01:exon:17949;Parent=MsG0380013984.01.T01
Chr3	CDS	48574347	48574643	48574347	ID=MsG0380013984.01.T01:cds;Parent=MsG0380013984.01.T01
Chr3	mRNA	48574451	48574525	48574451	ID=MsG0380013984.01.T02;Parent=MsG0380013984.01;Name=MsG0380013984.01.T02;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|24
Chr3	exon	48574451	48574525	48574451	ID=MsG0380013984.01.T02:exon:17950;Parent=MsG0380013984.01.T02
Chr3	CDS	48574451	48574525	48574451	ID=MsG0380013984.01.T02:cds;Parent=MsG0380013984.01.T02

Gene Sequence

>MsG0380013984.01.T02

ATGGCTCCTCTCCTCTCGAGAATTCATATATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAG

>MsG0380013984.01.T01

CAAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCAGGGGGGACCATCATGGCTCCTCTCCTCTCGAGAATTCATATATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTTGGCCTCAATAGAAAAAGAAAAACGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCACCTCTTTCATTCTGGGGTGACGGCGGGATCGTACCATTCTCTTGA

Protein sequence

>MsG0380013984.01.T02

MAPLLSRIHISLISIWTAISRAQV*

>MsG0380013984.01.T01

QTSPQEDRWGDSGEIQCRSNFLFTRGIRAVQGGPSWLLSSREFIYPLSVYGQLSLEHRFRFGLNRKRKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFS*