AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018249.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018249.01.T01 MTR_4g008080 88.331 617 55 5 5 617 2 605 0.0 992
MsG0480018249.01.T01 MTR_3g110650 31.177 603 330 17 43 611 105 656 7.92e-73 247
MsG0480018249.01.T01 MTR_3g110650 30.102 196 125 4 21 206 313 506 1.32e-14 77.8
MsG0480018249.01.T01 MTR_4g093650 30.724 677 342 21 1 613 1 614 1.11e-67 232
MsG0480018249.01.T01 MTR_2g009650 33.258 442 239 16 223 613 328 764 3.18e-53 195
MsG0480018249.01.T01 MTR_2g009650 37.017 181 78 7 22 171 50 225 6.35e-21 97.8
MsG0480018249.01.T01 MTR_2g009650 30.769 182 110 5 17 183 328 508 1.58e-16 84.0
MsG0480018249.01.T01 MTR_2g009650 31.646 158 88 2 226 363 48 205 1.90e-16 83.6
MsG0480018249.01.T01 MTR_5g031720 34.328 402 213 11 7 363 25 420 2.70e-47 176
MsG0480018249.01.T01 MTR_5g031720 46.154 78 41 1 534 610 513 590 1.83e-11 67.4
MsG0480018249.01.T01 MTR_6g012630 33.167 401 227 11 4 365 32 430 4.13e-45 166
MsG0480018249.01.T01 MTR_6g012630 32.678 407 233 11 4 371 32 436 7.93e-45 168
MsG0480018249.01.T01 MTR_6g012630 32.678 407 233 11 4 371 32 436 1.07e-44 167
MsG0480018249.01.T01 MTR_7g011080 31.034 435 227 13 1 371 19 444 6.73e-42 160
MsG0480018249.01.T01 MTR_7g011080 33.133 166 103 4 41 202 326 487 7.78e-11 65.5
MsG0480018249.01.T01 MTR_3g091800 27.494 451 242 16 12 389 52 490 3.36e-35 141
MsG0480018249.01.T01 MTR_2g019090 27.293 447 246 15 4 380 22 459 8.15e-34 137
MsG0480018249.01.T01 MTR_2g019090 25.625 160 112 2 19 173 312 469 1.50e-11 67.8
MsG0480018249.01.T01 MTR_2g019090 26.846 447 247 16 4 380 22 458 1.55e-31 130
MsG0480018249.01.T01 MTR_2g019090 22.397 317 189 8 19 286 311 619 3.15e-14 76.3
MsG0480018249.01.T01 MTR_7g115340 25.686 401 225 17 225 610 46 388 1.01e-19 92.8
MsG0480018249.01.T01 MTR_7g115340 25.686 401 225 17 225 610 114 456 3.19e-19 91.7
MsG0480018249.01.T01 MTR_2g038020 27.679 224 132 7 227 425 71 289 2.80e-17 85.5
MsG0480018249.01.T01 MTR_2g038020 32.099 162 95 4 19 165 69 230 3.39e-11 66.2
MsG0480018249.01.T01 MTR_1g070380 35.075 134 80 1 225 351 164 297 1.92e-16 83.2
MsG0480018249.01.T01 MTR_1g070380 35.659 129 76 1 225 346 164 292 9.57e-16 80.9
MsG0480018249.01.T01 MTR_4g127380 32.877 146 89 2 227 363 45 190 5.63e-15 77.8
MsG0480018249.01.T01 MTR_7g080630 23.372 261 160 7 19 261 99 337 1.26e-11 67.0
MsG0480018249.01.T01 MTR_7g080630 25.581 172 113 3 190 351 68 234 7.67e-11 63.9
MsG0480018249.01.T01 MTR_7g080630 24.865 185 124 3 190 364 68 247 7.85e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018249.01.T01 AT1G51580 39.882 677 277 24 6 613 4 619 3.21e-115 357
MsG0480018249.01.T01 AT5G15270 34.146 410 226 11 3 371 26 432 1.66e-56 200
MsG0480018249.01.T01 AT5G15270 37.963 108 62 2 97 203 369 472 5.61e-13 72.0
MsG0480018249.01.T01 AT5G15270 34.146 410 226 11 3 371 26 432 2.25e-56 200
MsG0480018249.01.T01 AT5G15270 39.815 108 60 3 97 203 369 472 5.21e-13 72.4
MsG0480018249.01.T01 AT5G15270 34.146 410 226 11 3 371 26 432 2.25e-56 200
MsG0480018249.01.T01 AT5G15270 39.815 108 60 3 97 203 369 472 5.21e-13 72.4
MsG0480018249.01.T01 AT5G64390 30.383 418 248 9 224 616 450 849 1.83e-47 179
MsG0480018249.01.T01 AT5G64390 29.762 168 105 5 19 173 451 618 2.80e-18 89.7
MsG0480018249.01.T01 AT5G64390 30.000 180 91 3 22 171 49 223 6.85e-16 82.0
MsG0480018249.01.T01 AT5G64390 29.940 167 88 3 206 345 21 185 1.59e-12 71.2
MsG0480018249.01.T01 AT5G64390 30.622 418 256 9 224 616 450 858 4.05e-46 175
MsG0480018249.01.T01 AT5G64390 29.762 168 105 5 19 173 451 618 2.54e-18 89.7
MsG0480018249.01.T01 AT5G64390 30.000 180 91 3 22 171 49 223 6.66e-16 82.0
MsG0480018249.01.T01 AT5G64390 29.940 167 88 3 206 345 21 185 1.57e-12 71.2
MsG0480018249.01.T01 AT5G53060 30.521 403 225 11 14 363 62 462 8.49e-40 154
MsG0480018249.01.T01 AT5G53060 30.521 403 225 11 14 363 62 462 3.28e-39 153
MsG0480018249.01.T01 AT2G22600 33.019 424 201 15 8 363 12 420 8.94e-38 149
MsG0480018249.01.T01 AT1G14170 32.124 386 201 11 19 363 10 375 1.71e-37 145
MsG0480018249.01.T01 AT1G14170 36.066 122 73 3 55 172 276 396 4.57e-12 68.9
MsG0480018249.01.T01 AT1G14170 32.124 386 201 11 19 363 43 408 1.74e-37 145
MsG0480018249.01.T01 AT1G14170 34.247 146 76 3 220 346 38 182 4.22e-17 85.1
MsG0480018249.01.T01 AT1G14170 36.066 122 73 3 55 172 309 429 4.59e-12 68.9
MsG0480018249.01.T01 AT1G14170 32.124 386 201 11 19 363 18 383 1.80e-37 145
MsG0480018249.01.T01 AT1G14170 34.247 146 76 3 220 346 13 157 3.83e-17 84.7
MsG0480018249.01.T01 AT1G14170 36.066 122 73 3 55 172 284 404 4.82e-12 68.9
MsG0480018249.01.T01 AT5G64390 28.499 393 235 10 224 588 450 824 2.47e-34 139
MsG0480018249.01.T01 AT5G64390 29.762 168 105 5 19 173 451 618 2.56e-18 89.7
MsG0480018249.01.T01 AT5G64390 30.000 180 91 3 22 171 49 223 7.42e-16 82.0
MsG0480018249.01.T01 AT5G64390 29.940 167 88 3 206 345 21 185 1.67e-12 71.2
MsG0480018249.01.T01 AT5G46190 26.392 413 232 12 20 363 44 453 1.90e-29 124
MsG0480018249.01.T01 AT5G46190 26.392 413 232 12 20 363 44 453 2.22e-29 124
MsG0480018249.01.T01 AT5G46190 26.392 413 232 12 20 363 44 453 2.22e-29 124
MsG0480018249.01.T01 AT5G46190 26.392 413 232 12 20 363 44 453 2.22e-29 124
MsG0480018249.01.T01 AT5G09560 28.693 352 175 9 71 363 114 448 3.27e-27 117
MsG0480018249.01.T01 AT4G18375 26.651 439 240 14 2 363 15 448 4.11e-26 113
MsG0480018249.01.T01 AT4G18375 26.651 439 240 14 2 363 15 448 5.75e-26 113
MsG0480018249.01.T01 AT3G04610 34.694 147 89 3 225 364 186 332 2.23e-18 89.4
MsG0480018249.01.T01 AT3G04610 34.694 147 89 3 225 364 186 332 2.23e-18 89.4
MsG0480018249.01.T01 AT3G04610 34.694 147 89 3 225 364 162 308 2.51e-18 89.0
MsG0480018249.01.T01 AT3G04610 34.694 147 89 3 225 364 162 308 2.51e-18 89.0
MsG0480018249.01.T01 AT4G26000 30.857 175 112 3 198 363 46 220 2.57e-17 85.9
MsG0480018249.01.T01 AT4G26000 28.652 178 111 5 3 165 58 234 1.43e-11 67.8
MsG0480018249.01.T01 AT4G18375 33.803 142 89 2 224 363 97 235 5.89e-16 80.9

Find 205 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATTCCATACGTAAAATT+TGG 0.133028 4:+2206758 MsG0480018249.01.T01:three_prime_UTR
CTTTAAACTCGCCAGGTTAT+TGG 0.172226 4:+2205544 MsG0480018249.01.T01:intron
AGACCTGTCGAATTTGATTT+AGG 0.176691 4:-2206368 None:intergenic
GATAAAGTTGGTAGTCTTAT+TGG 0.196611 4:+2204480 MsG0480018249.01.T01:CDS
CTTTACTGCGTTAAAATTTC+CGG 0.197707 4:-2204232 None:intergenic
AAGAACACTCCTCCAAATTT+TGG 0.205767 4:+2205637 MsG0480018249.01.T01:CDS
AAGTTAGAGATGTTTGTATT+AGG 0.209518 4:+2206657 MsG0480018249.01.T01:three_prime_UTR
ATCTCAACGGGTGAGTTATT+TGG 0.224083 4:-2206294 None:intergenic
GATGCTGTTCTTCGCGTTCA+TGG 0.236775 4:+2205207 MsG0480018249.01.T01:CDS
CAGGATAATGTAGGCAATTC+TGG 0.259911 4:+2204285 MsG0480018249.01.T01:CDS
CTGCGCAGCTTGCTTTGATT+AGG 0.263945 4:+2202763 MsG0480018249.01.T01:CDS
AGTTAGAGATGTTTGTATTA+GGG 0.266254 4:+2206658 MsG0480018249.01.T01:three_prime_UTR
AGTGTGTTTGTTTGAGAGTT+TGG 0.272081 4:+2202469 MsG0480018249.01.T01:five_prime_UTR
CGCAGTTTCAAGCTGTCTTC+AGG 0.275558 4:+2204266 MsG0480018249.01.T01:CDS
TGCGCAGCTTGCTTTGATTA+GGG 0.276981 4:+2202764 MsG0480018249.01.T01:CDS
CCTTCTGTTGCCCCAGGTAT+TGG 0.285465 4:-2206497 None:intergenic
GGTGGTGGTGCACCAAAATT+TGG 0.287125 4:-2205649 None:intergenic
TTTAATTTGCCTTCAAGAAA+TGG 0.300723 4:+2206127 MsG0480018249.01.T01:CDS
GAAGGCAACATGTGATTTCT+TGG 0.305555 4:-2205714 None:intergenic
GCAGTTAACAGAGGAAATTC+AGG 0.318558 4:+2206088 MsG0480018249.01.T01:CDS
TCCTGGTGACGAGTTTATTC+AGG 0.321205 4:+2202977 MsG0480018249.01.T01:CDS
AGAAATCACATGTTGCCTTC+TGG 0.322189 4:+2205717 MsG0480018249.01.T01:CDS
ATTCCGTGATCTTGGAGAAT+TGG 0.332845 4:-2205931 None:intergenic
ATAAAGTTGGTAGTCTTATT+GGG 0.333132 4:+2204481 MsG0480018249.01.T01:CDS
GACCTGTCGAATTTGATTTA+GGG 0.333482 4:-2206367 None:intergenic
TTTAAACTCGCCAGGTTATT+GGG 0.338536 4:+2205545 MsG0480018249.01.T01:intron
TGATTTCTTGGCCTGTATAA+AGG 0.342833 4:-2205702 None:intergenic
CTTCGAAAAGATACGTATAT+TGG 0.350240 4:-2205361 None:intergenic
GTAAGACCTTAAACTAAAAC+TGG 0.358101 4:-2206614 None:intergenic
TTTGGAGGAGTGTTCTTCAT+TGG 0.360122 4:-2205631 None:intergenic
GAAGGACTGGTGATTGTATC+TGG 0.363031 4:+2206515 MsG0480018249.01.T01:CDS
ACCTGAGGATTCCGTGATCT+TGG 0.368939 4:-2205939 None:intergenic
TAAAGGAGGAGGGGTGTCTC+TGG 0.370887 4:-2205685 None:intergenic
CATGGTCGACTTACAGAGAT+TGG 0.374787 4:+2205225 MsG0480018249.01.T01:CDS
GGAATAGGAGAATGATCTTT+AGG 0.380775 4:-2202951 None:intergenic
CGGGCTTTACAAAACGAAAC+TGG 0.393161 4:+2204522 MsG0480018249.01.T01:CDS
TCGTCACCAGGAGGAGGAAT+AGG 0.394002 4:-2202966 None:intergenic
GAAAGGTGGTTCTGTGGTGC+GGG 0.396401 4:+2204503 MsG0480018249.01.T01:CDS
CCTTCAAGAAATGGGACTCC+TGG 0.398880 4:+2206136 MsG0480018249.01.T01:CDS
TTAATTTGCCTTCAAGAAAT+GGG 0.402969 4:+2206128 MsG0480018249.01.T01:CDS
TTCCGTGATCTTGGAGAATT+GGG 0.403766 4:-2205930 None:intergenic
GCTGATGATCAACAGGCATT+GGG 0.405438 4:-2205833 None:intergenic
TTGGAGGAGTGTTCTTCATT+GGG 0.416455 4:-2205630 None:intergenic
GTCTCTGGGAACGGTGGCAC+AGG 0.416596 4:-2205670 None:intergenic
AAGTCCTAAACTCACATTCC+AGG 0.417768 4:-2206154 None:intergenic
CCAGGAGTCCCATTTCTTGA+AGG 0.418557 4:-2206136 None:intergenic
TGAGGAGAATAATAAGAAAT+CGG 0.418591 4:+2202818 MsG0480018249.01.T01:CDS
TCTGCTCAGTGCCTAATTCA+AGG 0.418685 4:+2206557 MsG0480018249.01.T01:CDS
TGGGGAACCCGTTGAGGATA+AGG 0.419434 4:-2204342 None:intergenic
CATCCTCCTCCTCTTCCTCA+TGG 0.422045 4:+2205741 MsG0480018249.01.T01:CDS
GTTGTTCATGATCCAATACC+TGG 0.423763 4:+2206485 MsG0480018249.01.T01:CDS
CGCAGCGGATTCCTCGGCCG+CGG 0.429517 4:-2202745 None:intergenic
GGGAACGGTGGCACAGGTGG+TGG 0.430926 4:-2205664 None:intergenic
GACCACACGCTCATCTGAAT+CGG 0.432950 4:-2204574 None:intergenic
ACCTGCTCATAGAATGTTTG+TGG 0.433502 4:+2204422 MsG0480018249.01.T01:CDS
TCATAGAATGTTTGTGGAAG+AGG 0.434594 4:+2204428 MsG0480018249.01.T01:CDS
AGCATCTTGCACAGATTGTA+TGG 0.438066 4:-2205569 None:intergenic
TAAGGAACTCGATCCATGTT+TGG 0.439543 4:-2205888 None:intergenic
ACCACAGGTAGGGTGCCTCT+TGG 0.440080 4:+2205293 MsG0480018249.01.T01:CDS
CCACAGGTAGGGTGCCTCTT+GGG 0.440345 4:+2205294 MsG0480018249.01.T01:CDS
CCTTATCCTCGTGGTTATGA+AGG 0.446054 4:+2205906 MsG0480018249.01.T01:CDS
TTTCCTGATCCTCAGATCTC+TGG 0.447904 4:+2206452 MsG0480018249.01.T01:intron
TAACCTCTGGAATGATGATC+AGG 0.454135 4:-2204369 None:intergenic
GAGAATAATAAGAAATCGGT+TGG 0.458567 4:+2202822 MsG0480018249.01.T01:CDS
GTAAGATTATTGAAAAGATT+AGG 0.463904 4:+2202898 MsG0480018249.01.T01:CDS
TATCAAGTTGGTTGTGTGCT+TGG 0.463912 4:+2202867 MsG0480018249.01.T01:CDS
AGTGGAACCTTATCCTCAAC+GGG 0.463927 4:+2204335 MsG0480018249.01.T01:CDS
TTATGGTGTATGCAGATAAC+CGG 0.464073 4:+2204213 MsG0480018249.01.T01:intron
TATTATCTCCGCCGCGGCCG+AGG 0.465771 4:+2202734 MsG0480018249.01.T01:CDS
AAGAAAGTGGTGCTCAGGTT+AGG 0.467862 4:+2202922 MsG0480018249.01.T01:CDS
TAAACTAAAACTGGAGACTA+AGG 0.472976 4:-2206605 None:intergenic
ATCCTCCTCCTCTTCCTCAT+GGG 0.472985 4:+2205742 MsG0480018249.01.T01:CDS
CCTTCATAACCACGAGGATA+AGG 0.473558 4:-2205906 None:intergenic
ACATGGATTAAATACATATG+AGG 0.474239 4:-2206324 None:intergenic
GGAAAGGTGGTTCTGTGGTG+CGG 0.475128 4:+2204502 MsG0480018249.01.T01:CDS
AATGCATGCTGATGATCAAC+AGG 0.476221 4:-2205840 None:intergenic
AATAGTTTCTCGAATTCTGC+TGG 0.479181 4:-2205605 None:intergenic
GGGTGCCTCTTGGGCAAGGG+AGG 0.479406 4:+2205303 MsG0480018249.01.T01:CDS
AGAATGCGGAAAACGGTGTC+GGG 0.480032 4:-2202600 None:intergenic
TGAGGAGGTGGAGGAGGCAT+AGG 0.481079 4:-2205786 None:intergenic
GTTGGTTGTGTGCTTGGTAG+AGG 0.483336 4:+2202873 MsG0480018249.01.T01:CDS
AAGCTGCGCAGCGGATTCCT+CGG 0.485787 4:-2202751 None:intergenic
GGTAGGGTGCCTCTTGGGCA+AGG 0.487129 4:+2205299 MsG0480018249.01.T01:CDS
ACGGTGTCGGGTTGAGTTTG+AGG 0.487282 4:-2202588 None:intergenic
ATGTATTTAATCCATGTGTA+CGG 0.487300 4:+2206330 MsG0480018249.01.T01:CDS
TGTATTTAATCCATGTGTAC+GGG 0.491831 4:+2206331 MsG0480018249.01.T01:CDS
TAGAATCTTGACGCCGTCGC+CGG 0.494953 4:-2202661 None:intergenic
ATTCTAATTGACGACTTCGC+CGG 0.499747 4:+2202678 MsG0480018249.01.T01:CDS
ACACCCCTCCTCCTTTATAC+AGG 0.499868 4:+2205691 MsG0480018249.01.T01:CDS
TGCTGATGATCAACAGGCAT+TGG 0.500815 4:-2205834 None:intergenic
ATGCCTCCTCCACCTCCTCA+TGG 0.504717 4:+2205789 MsG0480018249.01.T01:CDS
CTACCTGTGGTGAACGCACT+AGG 0.505710 4:-2205281 None:intergenic
TGAGGGATAGTGATCTCAAC+GGG 0.507713 4:-2206306 None:intergenic
TCACAATGAAGAAGTTGTAC+AGG 0.508659 4:+2205404 MsG0480018249.01.T01:CDS
TGGAATGATGATCAGGAGGA+TGG 0.508804 4:-2204362 None:intergenic
TAGGCAAGAAAGTGGTGCTC+AGG 0.508885 4:+2202917 MsG0480018249.01.T01:CDS
TCTATACAAATAGTTGATGC+TGG 0.509801 4:+2204549 MsG0480018249.01.T01:CDS
TCCACAAACATTCTATGAGC+AGG 0.512163 4:-2204423 None:intergenic
AGCGGATTCCTCGGCCGCGG+CGG 0.514639 4:-2202742 None:intergenic
AATAACAACGATGCGGTCAT+CGG 0.516311 4:-2202715 None:intergenic
ACACAACCAACTTGATAACT+AGG 0.517098 4:-2202861 None:intergenic
TGGTCAATCCCATGAGGAAG+AGG 0.517517 4:-2205750 None:intergenic
CTACTCTCCCTCTCCGGCGA+CGG 0.518942 4:+2202648 MsG0480018249.01.T01:CDS
AAAGGAGGAGGGGTGTCTCT+GGG 0.519298 4:-2205684 None:intergenic
CATTCTCCTATTCCTCCTCC+TGG 0.519737 4:+2202960 MsG0480018249.01.T01:CDS
ATTCCATGAGGAGGTGGAGG+AGG 0.520089 4:-2205792 None:intergenic
TCTGGGAACGGTGGCACAGG+TGG 0.520685 4:-2205667 None:intergenic
TCCAAGATCACGGAATCCTC+AGG 0.521970 4:+2205938 MsG0480018249.01.T01:CDS
GGCACAGAGAATGCGGAAAA+CGG 0.522134 4:-2202607 None:intergenic
AGGAGGGGTGTCTCTGGGAA+CGG 0.522535 4:-2205679 None:intergenic
GGAGGCATAGGTGGACCAGC+TGG 0.525434 4:-2205774 None:intergenic
TCAGAAATGCGAAGAGTCAC+TGG 0.525968 4:+2205336 MsG0480018249.01.T01:CDS
CTTGGCCTGTATAAAGGAGG+AGG 0.526235 4:-2205696 None:intergenic
ATCCCATGAGGAAGAGGAGG+AGG 0.527750 4:-2205744 None:intergenic
ACCACACGCTCATCTGAATC+GGG 0.528704 4:-2204573 None:intergenic
GGTTGTGTGCTTGGTAGAGG+TGG 0.529115 4:+2202876 MsG0480018249.01.T01:CDS
GGAATGATGATCAGGAGGAT+GGG 0.531822 4:-2204361 None:intergenic
ACCAGTCCTTCTGTTGCCCC+AGG 0.533747 4:-2206503 None:intergenic
CGGAAAAGAAGAATAACCTC+TGG 0.535404 4:-2204382 None:intergenic
GGTAGTCTTATTGGGAAAGG+TGG 0.537729 4:+2204489 MsG0480018249.01.T01:CDS
GCTCCTAGTGCGTTCACCAC+AGG 0.538183 4:+2205278 MsG0480018249.01.T01:CDS
GGGTCGCGGTCCGCCAAACA+TGG 0.539435 4:+2205875 MsG0480018249.01.T01:CDS
ACCTGGGGCAACAGAAGGAC+TGG 0.539702 4:+2206502 MsG0480018249.01.T01:CDS
ATCGTCTGGTGGTGCTCAAG+TGG 0.542414 4:+2204317 MsG0480018249.01.T01:CDS
GTTGGTAGTCTTATTGGGAA+AGG 0.543367 4:+2204486 MsG0480018249.01.T01:CDS
GTAGGGTGCCTCTTGGGCAA+GGG 0.543380 4:+2205300 MsG0480018249.01.T01:CDS
CGAAGAACAGCATCTTGAGC+AGG 0.544227 4:-2205198 None:intergenic
GGAGAGGGAGAGTAGAGAAT+CGG 0.544945 4:-2202640 None:intergenic
ATAGTAATGCAGTTGTTGCT+AGG 0.546066 4:+2205256 MsG0480018249.01.T01:CDS
CATGGGATTGACCATCCAGC+TGG 0.555902 4:+2205759 MsG0480018249.01.T01:CDS
CATGACCTCCCTTGCCCAAG+AGG 0.557272 4:-2205308 None:intergenic
GGAGGTGGAGGAGGCATAGG+TGG 0.557581 4:-2205783 None:intergenic
TAGTGCGTTCACCACAGGTA+GGG 0.557593 4:+2205283 MsG0480018249.01.T01:CDS
TGGTCAATTCCATGAGGAGG+TGG 0.558814 4:-2205798 None:intergenic
GAATGATGATCAGGAGGATG+GGG 0.559961 4:-2204360 None:intergenic
CACCCTAAATCAAATTCGAC+AGG 0.561946 4:+2206365 MsG0480018249.01.T01:CDS
GATTCTCTACTCTCCCTCTC+CGG 0.562442 4:+2202642 MsG0480018249.01.T01:CDS
CAGTTAACAGAGGAAATTCA+GGG 0.567193 4:+2206089 MsG0480018249.01.T01:CDS
TGTTGTTCTCCCCGTACACA+TGG 0.568809 4:-2206341 None:intergenic
CAGAGGAAATTCAGGGGCAA+CGG 0.569128 4:+2206096 MsG0480018249.01.T01:CDS
CTTGACGCCGTCGCCGGAGA+GGG 0.571429 4:-2202655 None:intergenic
TATTGGGAAAGGTGGTTCTG+TGG 0.573285 4:+2204497 MsG0480018249.01.T01:CDS
TCAATTCCATGAGGAGGTGG+AGG 0.575095 4:-2205795 None:intergenic
GAGAATGCGGAAAACGGTGT+CGG 0.575988 4:-2202601 None:intergenic
CATGGATTAAATACATATGA+GGG 0.576895 4:-2206323 None:intergenic
GAAAAGATTAGGCAAGAAAG+TGG 0.578033 4:+2202909 MsG0480018249.01.T01:CDS
AGAATAATAAGAAATCGGTT+GGG 0.580922 4:+2202823 MsG0480018249.01.T01:CDS
CATGGAATTGACCATCCAGC+TGG 0.581422 4:+2205807 MsG0480018249.01.T01:CDS
CCAATACCTGGGGCAACAGA+AGG 0.582285 4:+2206497 MsG0480018249.01.T01:CDS
AGAGGAGGAGGATGTCCAGA+AGG 0.584420 4:-2205732 None:intergenic
TTAGCACCTAGTTATCAAGT+TGG 0.585008 4:+2202855 MsG0480018249.01.T01:CDS
ATCGGAGGAAGTGACATCTC+CGG 0.586977 4:-2202697 None:intergenic
AACAACGATGCGGTCATCGG+AGG 0.587188 4:-2202712 None:intergenic
TTGGCCTGTATAAAGGAGGA+GGG 0.587675 4:-2205695 None:intergenic
ACCTGAATAAACTCGTCACC+AGG 0.590413 4:-2202978 None:intergenic
GGTGGAGAAGGATAATAATG+AGG 0.591100 4:+2202800 MsG0480018249.01.T01:CDS
GAGTAGAGAATCGGATTTAG+CGG 0.591992 4:-2202631 None:intergenic
TCTATGTTGAAGAACTGAGA+AGG 0.594358 4:+2206801 MsG0480018249.01.T01:three_prime_UTR
AGGGGTGTCTCTGGGAACGG+TGG 0.595203 4:-2205676 None:intergenic
ATAAACTCGTCACCAGGAGG+AGG 0.595585 4:-2202972 None:intergenic
TTGTGTCAGCAAGATAAAGT+TGG 0.597987 4:+2204468 MsG0480018249.01.T01:CDS
AAGTGGAACCTTATCCTCAA+CGG 0.598581 4:+2204334 MsG0480018249.01.T01:CDS
GGTCTAGCACTCTCAGAACC+CGG 0.599010 4:-2204402 None:intergenic
AGCTGTCTTCAGGATAATGT+AGG 0.599802 4:+2204276 MsG0480018249.01.T01:CDS
GGTCGTCATATCTGCGCTAG+AGG 0.603406 4:+2204593 MsG0480018249.01.T01:CDS
TCAGATCTCTGGTGCAAACG+TGG 0.604055 4:+2206463 MsG0480018249.01.T01:intron
CTGATGATCAACAGGCATTG+GGG 0.605876 4:-2205832 None:intergenic
AAACACACTTCTCACTTCCA+CGG 0.607214 4:-2202455 None:intergenic
GGTGGTGCACCAAAATTTGG+AGG 0.608523 4:-2205646 None:intergenic
GCATAGGTGGACCAGCTGGA+TGG 0.609702 4:-2205770 None:intergenic
CTAGTGCGTTCACCACAGGT+AGG 0.611077 4:+2205282 MsG0480018249.01.T01:CDS
TGTAACTAAGCAAGTGAGTG+TGG 0.612349 4:+2202495 MsG0480018249.01.T01:five_prime_UTR
GGAGGATGGGGAACCCGTTG+AGG 0.612562 4:-2204348 None:intergenic
GACCCAATTCTCCAAGATCA+CGG 0.614919 4:+2205928 MsG0480018249.01.T01:CDS
TCTTGACGCCGTCGCCGGAG+AGG 0.617793 4:-2202656 None:intergenic
CCCAAGAGGCACCCTACCTG+TGG 0.621363 4:-2205294 None:intergenic
TTGTTCATGATCCAATACCT+GGG 0.626338 4:+2206486 MsG0480018249.01.T01:CDS
GATCGAGTTCCTTATCCTCG+TGG 0.628485 4:+2205897 MsG0480018249.01.T01:CDS
GGAACTCGATCCATGTTTGG+CGG 0.629242 4:-2205885 None:intergenic
TAGCGGCGGCACAGAGAATG+CGG 0.630748 4:-2202614 None:intergenic
CCTCTGGAATGATGATCAGG+AGG 0.633543 4:-2204366 None:intergenic
ATGAGGGATAGTGATCTCAA+CGG 0.640910 4:-2206307 None:intergenic
TCAATCCCATGAGGAAGAGG+AGG 0.644868 4:-2205747 None:intergenic
TTTCTTGGCCTGTATAAAGG+AGG 0.650882 4:-2205699 None:intergenic
GTGTTTCAGGCAGTTAACAG+AGG 0.651192 4:+2206079 MsG0480018249.01.T01:intron
TAAAAGTTCAATTCACACAA+TGG 0.652067 4:-2206689 None:intergenic
GGATGGTCAATTCCATGAGG+AGG 0.652254 4:-2205801 None:intergenic
TGATGATCAACAGGCATTGG+GGG 0.658278 4:-2205831 None:intergenic
AATCAAAGCAAGCTGCGCAG+CGG 0.661708 4:-2202760 None:intergenic
TTCAACATAGAAACTTACGA+TGG 0.671241 4:-2206789 None:intergenic
ACTCTGTAACTAACTAACCG+TGG 0.671479 4:+2202438 MsG0480018249.01.T01:five_prime_UTR
CCTCCTGATCATCATTCCAG+AGG 0.672492 4:+2204366 MsG0480018249.01.T01:CDS
GTATTTAATCCATGTGTACG+GGG 0.672839 4:+2206332 MsG0480018249.01.T01:CDS
ACCCGATTCAGATGAGCGTG+TGG 0.677601 4:+2204572 MsG0480018249.01.T01:CDS
TGGCCTGTATAAAGGAGGAG+GGG 0.685963 4:-2205694 None:intergenic
GATAATGTAGGCAATTCTGG+TGG 0.689068 4:+2204288 MsG0480018249.01.T01:CDS
TGTTCATGATCCAATACCTG+GGG 0.694477 4:+2206487 MsG0480018249.01.T01:CDS
TAGAGAATCGGATTTAGCGG+CGG 0.700630 4:-2202628 None:intergenic
TGAATAAACTCGTCACCAGG+AGG 0.710003 4:-2202975 None:intergenic
CGTTGTTATTATCTCCGCCG+CGG 0.716435 4:+2202728 MsG0480018249.01.T01:CDS
GCTGGATGGTCAATCCCATG+AGG 0.737900 4:-2205756 None:intergenic
CGGAGATAATAACAACGATG+CGG 0.740819 4:-2202722 None:intergenic
AGTTAACAGAGGAAATTCAG+GGG 0.741945 4:+2206090 MsG0480018249.01.T01:CDS
GCTGGATGGTCAATTCCATG+AGG 0.745901 4:-2205804 None:intergenic
TTGGGTCCTTCATAACCACG+AGG 0.814355 4:-2205912 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAACATAATATTGAAT+TGG + Chr4:2203065-2203084 MsG0480018249.01.T01:intron 10.0%
!!! GATTTTATAATATTTTCTTT+TGG - Chr4:2205093-2205112 None:intergenic 10.0%
!! AAAAAATAAAACCTTGAATT+AGG - Chr4:2206571-2206590 None:intergenic 15.0%
!!! AACTTTAGAGATTTTTTTTA+AGG - Chr4:2206849-2206868 None:intergenic 15.0%
!!! AATGTATATGATATTTGTTA+AGG + Chr4:2205121-2205140 MsG0480018249.01.T01:intron 15.0%
!! AAAAAATGGTATTACTAAAG+AGG + Chr4:2203828-2203847 MsG0480018249.01.T01:intron 20.0%
!! ACATATCAACATAAAATATC+AGG - Chr4:2206239-2206258 None:intergenic 20.0%
!! GTAAGATTATTGAAAAGATT+AGG + Chr4:2202898-2202917 MsG0480018249.01.T01:CDS 20.0%
!! TAATGAATTGGATAAGAATA+TGG + Chr4:2203431-2203450 MsG0480018249.01.T01:intron 20.0%
!! TAGAAAAGATGATATAAACT+CGG + Chr4:2203265-2203284 MsG0480018249.01.T01:intron 20.0%
!! TAGTTGATTAAATTGTTATG+TGG + Chr4:2205499-2205518 MsG0480018249.01.T01:intron 20.0%
!!! AGAGATTTTTTTTAAGGAAA+TGG - Chr4:2206843-2206862 None:intergenic 20.0%
!!! AGTATTTTATACAAGTTGTT+AGG + Chr4:2206190-2206209 MsG0480018249.01.T01:intron 20.0%
!!! ATTCAAGGTTTTATTTTTTG+CGG + Chr4:2206572-2206591 MsG0480018249.01.T01:CDS 20.0%
!!! TATATCATCTTTTCTACAAT+AGG - Chr4:2203261-2203280 None:intergenic 20.0%
! AAGTTAGAGATGTTTGTATT+AGG + Chr4:2206657-2206676 MsG0480018249.01.T01:three_prime_UTR 25.0%
! ACAAAATTTAGCAAAGTTAC+TGG - Chr4:2204719-2204738 None:intergenic 25.0%
! ACAACTTGTATAAAATACTG+TGG - Chr4:2206189-2206208 None:intergenic 25.0%
! AGAATAATAAGAAATCGGTT+GGG + Chr4:2202823-2202842 MsG0480018249.01.T01:CDS 25.0%
! AGATCTAGAGATTAATGAAT+TGG + Chr4:2203419-2203438 MsG0480018249.01.T01:intron 25.0%
! AGTTAGAGATGTTTGTATTA+GGG + Chr4:2206658-2206677 MsG0480018249.01.T01:three_prime_UTR 25.0%
! ATCATTCCATACGTAAAATT+TGG + Chr4:2206758-2206777 MsG0480018249.01.T01:three_prime_UTR 25.0%
! ATGTATTTAATCCATGTGTA+CGG + Chr4:2206330-2206349 MsG0480018249.01.T01:CDS 25.0%
! TAAAAGTTCAATTCACACAA+TGG - Chr4:2206692-2206711 None:intergenic 25.0%
! TGAGGAGAATAATAAGAAAT+CGG + Chr4:2202818-2202837 MsG0480018249.01.T01:CDS 25.0%
! TGATATAAGTCAAAACTTGA+TGG + Chr4:2205476-2205495 MsG0480018249.01.T01:intron 25.0%
! TTTGCAATGTTAACTGTATA+CGG + Chr4:2205445-2205464 MsG0480018249.01.T01:intron 25.0%
!! ACATGGATTAAATACATATG+AGG - Chr4:2206327-2206346 None:intergenic 25.0%
!! CATGGATTAAATACATATGA+GGG - Chr4:2206326-2206345 None:intergenic 25.0%
!! GTTTCTCTTACAATTTTTCT+AGG - Chr4:2203390-2203409 None:intergenic 25.0%
!! TATCATCCAAATTTTACGTA+TGG - Chr4:2206767-2206786 None:intergenic 25.0%
!! TTCTTTTGTCATAATCAAAC+AGG + Chr4:2204918-2204937 MsG0480018249.01.T01:intron 25.0%
!!! ATAAAGTTGGTAGTCTTATT+GGG + Chr4:2204481-2204500 MsG0480018249.01.T01:CDS 25.0%
!!! TGAGAGCATTAAGAAAAATT+TGG + Chr4:2204010-2204029 MsG0480018249.01.T01:intron 25.0%
!!! TTAATTTGCCTTCAAGAAAT+GGG + Chr4:2206128-2206147 MsG0480018249.01.T01:CDS 25.0%
!!! TTTAATTTGCCTTCAAGAAA+TGG + Chr4:2206127-2206146 MsG0480018249.01.T01:CDS 25.0%
AAGAGTAAACAATCTGATGA+TGG - Chr4:2204974-2204993 None:intergenic 30.0%
AATACTAGACAAGATAGGAT+TGG + Chr4:2203571-2203590 MsG0480018249.01.T01:intron 30.0%
AATGACAACATTAGAGAGTT+AGG + Chr4:2203229-2203248 MsG0480018249.01.T01:intron 30.0%
AATTAACAGCTGTAGGATAT+TGG - Chr4:2203097-2203116 None:intergenic 30.0%
ATACTAGACAAGATAGGATT+GGG + Chr4:2203572-2203591 MsG0480018249.01.T01:intron 30.0%
ATGACAACATTAGAGAGTTA+GGG + Chr4:2203230-2203249 MsG0480018249.01.T01:intron 30.0%
CTGTTGAGTTATTCTAATCA+TGG + Chr4:2205001-2205020 MsG0480018249.01.T01:intron 30.0%
CTTCGAAAAGATACGTATAT+TGG - Chr4:2205364-2205383 None:intergenic 30.0%
CTTTACTGCGTTAAAATTTC+CGG - Chr4:2204235-2204254 None:intergenic 30.0%
GAAACTTATGTTGAGGTTTA+TGG + Chr4:2204196-2204215 MsG0480018249.01.T01:intron 30.0%
GAGAAAATACTAGACAAGAT+AGG + Chr4:2203566-2203585 MsG0480018249.01.T01:intron 30.0%
GAGAATAATAAGAAATCGGT+TGG + Chr4:2202822-2202841 MsG0480018249.01.T01:CDS 30.0%
GAGCATTAAGAAAAATTTGG+AGG + Chr4:2204013-2204032 MsG0480018249.01.T01:intron 30.0%
GTAAGACCTTAAACTAAAAC+TGG - Chr4:2206617-2206636 None:intergenic 30.0%
TAAACTAAAACTGGAGACTA+AGG - Chr4:2206608-2206627 None:intergenic 30.0%
TGTATTTAATCCATGTGTAC+GGG + Chr4:2206331-2206350 MsG0480018249.01.T01:CDS 30.0%
TGTCAATTCTGTAGTAAAGA+GGG + Chr4:2203925-2203944 MsG0480018249.01.T01:intron 30.0%
TTCAACATAGAAACTTACGA+TGG - Chr4:2206792-2206811 None:intergenic 30.0%
TTGTCAATTCTGTAGTAAAG+AGG + Chr4:2203924-2203943 MsG0480018249.01.T01:intron 30.0%
! CAATATACGTATCTTTTCGA+AGG + Chr4:2205362-2205381 MsG0480018249.01.T01:CDS 30.0%
! GATTTGGTTGTTGTTGTAAT+TGG + Chr4:2204121-2204140 MsG0480018249.01.T01:intron 30.0%
! GTTGTTGTTGTAAATTGTAG+TGG + Chr4:2204143-2204162 MsG0480018249.01.T01:intron 30.0%
! TAGTTATTGCTGTTGTTGAT+GGG + Chr4:2203512-2203531 MsG0480018249.01.T01:intron 30.0%
! TCTATACAAATAGTTGATGC+TGG + Chr4:2204549-2204568 MsG0480018249.01.T01:CDS 30.0%
! TTAGTTATTGCTGTTGTTGA+TGG + Chr4:2203511-2203530 MsG0480018249.01.T01:intron 30.0%
!! AAATTTGGAGGTTGATAGTT+TGG + Chr4:2204025-2204044 MsG0480018249.01.T01:intron 30.0%
!! GATAAAGTTGGTAGTCTTAT+TGG + Chr4:2204480-2204499 MsG0480018249.01.T01:CDS 30.0%
!! TTGATATGTCTGTTATTTCC+AGG + Chr4:2206250-2206269 MsG0480018249.01.T01:intron 30.0%
!!! TAGTCTCCAGTTTTAGTTTA+AGG + Chr4:2206608-2206627 MsG0480018249.01.T01:exon 30.0%
AATAGTTTCTCGAATTCTGC+TGG - Chr4:2205608-2205627 None:intergenic 35.0%
AGAACATGTTTCAACCCTTT+AGG + Chr4:2206053-2206072 MsG0480018249.01.T01:intron 35.0%
AGATGATATAAACTCGGCTT+AGG + Chr4:2203271-2203290 MsG0480018249.01.T01:intron 35.0%
AGCACCTATTGTAGAAAAGA+GGG + Chr4:2203625-2203644 MsG0480018249.01.T01:intron 35.0%
AGTCCAGTTGCTAAAGATAT+GGG + Chr4:2203966-2203985 MsG0480018249.01.T01:intron 35.0%
AGTGTGTTTGTTTGAGAGTT+TGG + Chr4:2202469-2202488 MsG0480018249.01.T01:five_prime_UTR 35.0%
AGTTAACAGAGGAAATTCAG+GGG + Chr4:2206090-2206109 MsG0480018249.01.T01:CDS 35.0%
ATAAAAGTAAAGCTGACCTG+AGG - Chr4:2205957-2205976 None:intergenic 35.0%
ATAGTAATGCAGTTGTTGCT+AGG + Chr4:2205256-2205275 MsG0480018249.01.T01:CDS 35.0%
ATTTAGCCAACACAACTTAG+TGG + Chr4:2204093-2204112 MsG0480018249.01.T01:intron 35.0%
CAAGAATGTTGCTGAATTAG+TGG + Chr4:2203755-2203774 MsG0480018249.01.T01:intron 35.0%
CAGTTAACAGAGGAAATTCA+GGG + Chr4:2206089-2206108 MsG0480018249.01.T01:CDS 35.0%
CATTGAGATTATTCTCGTGT+TGG - Chr4:2203726-2203745 None:intergenic 35.0%
CATTGTGTCTTAGAAATGTG+TGG + Chr4:2204797-2204816 MsG0480018249.01.T01:intron 35.0%
CCTTATCCTATGTACAAGTA+CGG - Chr4:2204675-2204694 None:intergenic 35.0%
CTCTGGCGTTAAATTATTCT+GGG + Chr4:2204862-2204881 MsG0480018249.01.T01:intron 35.0%
CTCTTTACTACGAAATCTAC+AGG - Chr4:2203321-2203340 None:intergenic 35.0%
GAAAAGATTAGGCAAGAAAG+TGG + Chr4:2202909-2202928 MsG0480018249.01.T01:CDS 35.0%
GATTTCGTAGTAAAGAGAGT+AGG + Chr4:2203324-2203343 MsG0480018249.01.T01:intron 35.0%
GGAATAGGAGAATGATCTTT+AGG - Chr4:2202954-2202973 None:intergenic 35.0%
GTAAAGAGGGTAGATTAGAT+TGG + Chr4:2203938-2203957 MsG0480018249.01.T01:intron 35.0%
GTATTTAATCCATGTGTACG+GGG + Chr4:2206332-2206351 MsG0480018249.01.T01:CDS 35.0%
TAGCACCTATTGTAGAAAAG+AGG + Chr4:2203624-2203643 MsG0480018249.01.T01:intron 35.0%
TATTGTTTGATCTGAGCCAT+GGG + Chr4:2204174-2204193 MsG0480018249.01.T01:intron 35.0%
TCACAATGAAGAAGTTGTAC+AGG + Chr4:2205404-2205423 MsG0480018249.01.T01:CDS 35.0%
TCATAGAATGTTTGTGGAAG+AGG + Chr4:2204428-2204447 MsG0480018249.01.T01:CDS 35.0%
TCGATAGCGTTAAATTGTTC+TGG + Chr4:2204766-2204785 MsG0480018249.01.T01:intron 35.0%
TCTATGTTGAAGAACTGAGA+AGG + Chr4:2206801-2206820 MsG0480018249.01.T01:three_prime_UTR 35.0%
TCTCTGGCGTTAAATTATTC+TGG + Chr4:2204861-2204880 MsG0480018249.01.T01:intron 35.0%
TGATTTCTTGGCCTGTATAA+AGG - Chr4:2205705-2205724 None:intergenic 35.0%
TGGGAATGATATTAGTGAGA+GGG + Chr4:2203591-2203610 MsG0480018249.01.T01:intron 35.0%
TTAGCACCTAGTTATCAAGT+TGG + Chr4:2202855-2202874 MsG0480018249.01.T01:CDS 35.0%
TTATGGTGTATGCAGATAAC+CGG + Chr4:2204213-2204232 MsG0480018249.01.T01:intron 35.0%
TTGGGAATGATATTAGTGAG+AGG + Chr4:2203590-2203609 MsG0480018249.01.T01:intron 35.0%
TTGTCTCCAAGAAAAATGCT+TGG - Chr4:2205991-2206010 None:intergenic 35.0%
TTGTGTCAGCAAGATAAAGT+TGG + Chr4:2204468-2204487 MsG0480018249.01.T01:CDS 35.0%
TTGTTCATGATCCAATACCT+GGG + Chr4:2206486-2206505 MsG0480018249.01.T01:CDS 35.0%
TTTAAACTCGCCAGGTTATT+GGG + Chr4:2205545-2205564 MsG0480018249.01.T01:intron 35.0%
! AAGAACACTCCTCCAAATTT+TGG + Chr4:2205637-2205656 MsG0480018249.01.T01:CDS 35.0%
! ACACAACCAACTTGATAACT+AGG - Chr4:2202864-2202883 None:intergenic 35.0%
! AGACCTGTCGAATTTGATTT+AGG - Chr4:2206371-2206390 None:intergenic 35.0%
! AGAGGTTATTCTTCTTTTCC+GGG + Chr4:2204384-2204403 MsG0480018249.01.T01:CDS 35.0%
! AGTCAAATCACTAGAGGTAT+AGG + Chr4:2203360-2203379 MsG0480018249.01.T01:intron 35.0%
! AGTTTTCATTACGAGCATGT+TGG + Chr4:2205042-2205061 MsG0480018249.01.T01:intron 35.0%
! ATGTGTTGTTAGACTAGACA+TGG + Chr4:2203196-2203215 MsG0480018249.01.T01:intron 35.0%
! CAACGTTTGTCTGATTTTTG+TGG + Chr4:2204941-2204960 MsG0480018249.01.T01:intron 35.0%
! CAGAGGTTATTCTTCTTTTC+CGG + Chr4:2204383-2204402 MsG0480018249.01.T01:CDS 35.0%
! CATAGTCCAAGCATTTTTCT+TGG + Chr4:2205982-2206001 MsG0480018249.01.T01:intron 35.0%
! CATGCATTTTCACATGGTAT+GGG + Chr4:2205855-2205874 MsG0480018249.01.T01:CDS 35.0%
! GACCTGTCGAATTTGATTTA+GGG - Chr4:2206370-2206389 None:intergenic 35.0%
! GGATATCATTTTGCATGAAG+AGG + Chr4:2204693-2204712 MsG0480018249.01.T01:intron 35.0%
! TGAACCCTCTTTTCTACAAT+AGG - Chr4:2203632-2203651 None:intergenic 35.0%
! TTGTTGATACCATTGATAGC+TGG + Chr4:2204837-2204856 MsG0480018249.01.T01:intron 35.0%
! TTTGTCTGATTTTTGTGGCT+GGG + Chr4:2204946-2204965 MsG0480018249.01.T01:intron 35.0%
!! CAACTTAGTGGACTAAGATT+TGG + Chr4:2204105-2204124 MsG0480018249.01.T01:intron 35.0%
!! GATTAGGGTTTTTGAGAGAA+TGG + Chr4:2202779-2202798 MsG0480018249.01.T01:CDS 35.0%
!! TATTTTGCTTTAAACTCGCC+AGG + Chr4:2205537-2205556 MsG0480018249.01.T01:intron 35.0%
AAACACACTTCTCACTTCCA+CGG - Chr4:2202458-2202477 None:intergenic 40.0%
AAGTCCTAAACTCACATTCC+AGG - Chr4:2206157-2206176 None:intergenic 40.0%
AAGTGGAACCTTATCCTCAA+CGG + Chr4:2204334-2204353 MsG0480018249.01.T01:CDS 40.0%
AATAACAACGATGCGGTCAT+CGG - Chr4:2202718-2202737 None:intergenic 40.0%
AATGCATGCTGATGATCAAC+AGG - Chr4:2205843-2205862 None:intergenic 40.0%
ACCTCAACATAAGTTTCCCA+TGG - Chr4:2204193-2204212 None:intergenic 40.0%
ACCTGCTCATAGAATGTTTG+TGG + Chr4:2204422-2204441 MsG0480018249.01.T01:CDS 40.0%
ACTCTGTAACTAACTAACCG+TGG + Chr4:2202438-2202457 MsG0480018249.01.T01:five_prime_UTR 40.0%
ACTTGCGAATTAACAGCTGT+AGG - Chr4:2203104-2203123 None:intergenic 40.0%
AGAAATCACATGTTGCCTTC+TGG + Chr4:2205717-2205736 MsG0480018249.01.T01:CDS 40.0%
AGCATCTTGCACAGATTGTA+TGG - Chr4:2205572-2205591 None:intergenic 40.0%
AGCCAAAATTGATCCCTCTT+TGG + Chr4:2203681-2203700 MsG0480018249.01.T01:intron 40.0%
AGCTGTCTTCAGGATAATGT+AGG + Chr4:2204276-2204295 MsG0480018249.01.T01:CDS 40.0%
ATATTAGTGAGAGGGAGAGT+TGG + Chr4:2203599-2203618 MsG0480018249.01.T01:intron 40.0%
ATCTCAACGGGTGAGTTATT+TGG - Chr4:2206297-2206316 None:intergenic 40.0%
ATGAGGGATAGTGATCTCAA+CGG - Chr4:2206310-2206329 None:intergenic 40.0%
ATTCCGTGATCTTGGAGAAT+TGG - Chr4:2205934-2205953 None:intergenic 40.0%
ATTCTAATTGACGACTTCGC+CGG + Chr4:2202678-2202697 MsG0480018249.01.T01:CDS 40.0%
ATTGTATGGTCCCAATAACC+TGG - Chr4:2205558-2205577 None:intergenic 40.0%
CACCCTAAATCAAATTCGAC+AGG + Chr4:2206365-2206384 MsG0480018249.01.T01:CDS 40.0%
CAGAGATGAGAATGTTGCAT+TGG + Chr4:2203173-2203192 MsG0480018249.01.T01:intron 40.0%
CAGGATAATGTAGGCAATTC+TGG + Chr4:2204285-2204304 MsG0480018249.01.T01:CDS 40.0%
CAGTCCAGTTGCTAAAGATA+TGG + Chr4:2203965-2203984 MsG0480018249.01.T01:intron 40.0%
CAGTTGCTAAAGATATGGGA+AGG + Chr4:2203970-2203989 MsG0480018249.01.T01:intron 40.0%
CCGTACTTGTACATAGGATA+AGG + Chr4:2204672-2204691 MsG0480018249.01.T01:intron 40.0%
CCTATGTACAAGTACGGTTA+AGG - Chr4:2204669-2204688 None:intergenic 40.0%
CCTTAACCGTACTTGTACAT+AGG + Chr4:2204666-2204685 MsG0480018249.01.T01:intron 40.0%
CGGAAAAGAAGAATAACCTC+TGG - Chr4:2204385-2204404 None:intergenic 40.0%
CGGAGATAATAACAACGATG+CGG - Chr4:2202725-2202744 None:intergenic 40.0%
CTATTGTTTGATCTGAGCCA+TGG + Chr4:2204173-2204192 MsG0480018249.01.T01:intron 40.0%
CTTAGTCCACTAAGTTGTGT+TGG - Chr4:2204102-2204121 None:intergenic 40.0%
CTTCCCATATCTTTAGCAAC+TGG - Chr4:2203972-2203991 None:intergenic 40.0%
CTTTAAACTCGCCAGGTTAT+TGG + Chr4:2205544-2205563 MsG0480018249.01.T01:intron 40.0%
CTTTACCTTATCCCACAAAG+TGG - Chr4:2203490-2203509 None:intergenic 40.0%
GAAGGCAACATGTGATTTCT+TGG - Chr4:2205717-2205736 None:intergenic 40.0%
GAGTAGAGAATCGGATTTAG+CGG - Chr4:2202634-2202653 None:intergenic 40.0%
GAGTGTAGTCAAATCACTAG+AGG + Chr4:2203354-2203373 MsG0480018249.01.T01:intron 40.0%
GATAATGTAGGCAATTCTGG+TGG + Chr4:2204288-2204307 MsG0480018249.01.T01:CDS 40.0%
GCAGTTAACAGAGGAAATTC+AGG + Chr4:2206088-2206107 MsG0480018249.01.T01:CDS 40.0%
GCCTGAAACACAAACCTAAA+GGG - Chr4:2206070-2206089 None:intergenic 40.0%
GGTGGAGAAGGATAATAATG+AGG + Chr4:2202800-2202819 MsG0480018249.01.T01:CDS 40.0%
GTTGTTCATGATCCAATACC+TGG + Chr4:2206485-2206504 MsG0480018249.01.T01:CDS 40.0%
TAAGGAACTCGATCCATGTT+TGG - Chr4:2205891-2205910 None:intergenic 40.0%
TCCACAAACATTCTATGAGC+AGG - Chr4:2204426-2204445 None:intergenic 40.0%
TGATATAAACTCGGCTTAGG+TGG + Chr4:2203274-2203293 MsG0480018249.01.T01:intron 40.0%
TGCCTGAAACACAAACCTAA+AGG - Chr4:2206071-2206090 None:intergenic 40.0%
TGTAACTAAGCAAGTGAGTG+TGG + Chr4:2202495-2202514 MsG0480018249.01.T01:five_prime_UTR 40.0%
TGTTCATGATCCAATACCTG+GGG + Chr4:2206487-2206506 MsG0480018249.01.T01:CDS 40.0%
TGTTGTTAGACTAGACATGG+TGG + Chr4:2203199-2203218 MsG0480018249.01.T01:intron 40.0%
TTCCGTGATCTTGGAGAATT+GGG - Chr4:2205933-2205952 None:intergenic 40.0%
TTTCTTGGCCTGTATAAAGG+AGG - Chr4:2205702-2205721 None:intergenic 40.0%
! AAGCTTTGACTTAGGTGGTT+TGG + Chr4:2203884-2203903 MsG0480018249.01.T01:intron 40.0%
! ACATGTTCTTGAAAGCACGA+AGG - Chr4:2206042-2206061 None:intergenic 40.0%
! ACCCTTTAGGTTTGTGTTTC+AGG + Chr4:2206066-2206085 MsG0480018249.01.T01:intron 40.0%
! AGAGTGCTAAGCTTTGACTT+AGG + Chr4:2203876-2203895 MsG0480018249.01.T01:intron 40.0%
! AGCCAAAGAGGGATCAATTT+TGG - Chr4:2203686-2203705 None:intergenic 40.0%
! AGCTTTGACTTAGGTGGTTT+GGG + Chr4:2203885-2203904 MsG0480018249.01.T01:intron 40.0%
! CATCAGCATGCATTTTCACA+TGG + Chr4:2205849-2205868 MsG0480018249.01.T01:CDS 40.0%
! CATGTTCTTGAAAGCACGAA+GGG - Chr4:2206041-2206060 None:intergenic 40.0%
! GCATGCATTTTCACATGGTA+TGG + Chr4:2205854-2205873 MsG0480018249.01.T01:CDS 40.0%
! GTTTGTCTGATTTTTGTGGC+TGG + Chr4:2204945-2204964 MsG0480018249.01.T01:intron 40.0%
! TATTGCTGTTGTTGATGGGA+TGG + Chr4:2203516-2203535 MsG0480018249.01.T01:intron 40.0%
! TTAGCACTCTTTTCTACCAC+AGG - Chr4:2203866-2203885 None:intergenic 40.0%
! TTGTCTGATTTTTGTGGCTG+GGG + Chr4:2204947-2204966 MsG0480018249.01.T01:intron 40.0%
!! ATGTCTGTTATTTCCAGGAC+TGG + Chr4:2206255-2206274 MsG0480018249.01.T01:intron 40.0%
!! GTTGGTAGTCTTATTGGGAA+AGG + Chr4:2204486-2204505 MsG0480018249.01.T01:CDS 40.0%
!! TAACCTCTGGAATGATGATC+AGG - Chr4:2204372-2204391 None:intergenic 40.0%
!! TAGGGTTTTTGAGAGAATGG+TGG + Chr4:2202782-2202801 MsG0480018249.01.T01:CDS 40.0%
!! TATCAAGTTGGTTGTGTGCT+TGG + Chr4:2202867-2202886 MsG0480018249.01.T01:CDS 40.0%
!! TTGGAGGAGTGTTCTTCATT+GGG - Chr4:2205633-2205652 None:intergenic 40.0%
!! TTTGGAGGAGTGTTCTTCAT+TGG - Chr4:2205634-2205653 None:intergenic 40.0%
!! TTTTGAGAGAATGGTGGAGA+AGG + Chr4:2202788-2202807 MsG0480018249.01.T01:CDS 40.0%
!!! TCTGGTGGTTTTAAATCGTC+TGG + Chr4:2204303-2204322 MsG0480018249.01.T01:CDS 40.0%
AAACTCGGCTTAGGTGGTTT+AGG + Chr4:2203280-2203299 MsG0480018249.01.T01:intron 45.0%
AAGAAAGTGGTGCTCAGGTT+AGG + Chr4:2202922-2202941 MsG0480018249.01.T01:CDS 45.0%
ACCTGAATAAACTCGTCACC+AGG - Chr4:2202981-2203000 None:intergenic 45.0%
AGTGGAACCTTATCCTCAAC+GGG + Chr4:2204335-2204354 MsG0480018249.01.T01:CDS 45.0%
CCTTATCCTCGTGGTTATGA+AGG + Chr4:2205906-2205925 MsG0480018249.01.T01:CDS 45.0%
CCTTCATAACCACGAGGATA+AGG - Chr4:2205909-2205928 None:intergenic 45.0%
CGGGCTTTACAAAACGAAAC+TGG + Chr4:2204522-2204541 MsG0480018249.01.T01:CDS 45.0%
CTGTAATGAGTTTCCAGTCC+TGG - Chr4:2206271-2206290 None:intergenic 45.0%
CTTATCCCACAAAGTGGAGT+CGG - Chr4:2203484-2203503 None:intergenic 45.0%
GAATGATGATCAGGAGGATG+GGG - Chr4:2204363-2204382 None:intergenic 45.0%
GACCCAATTCTCCAAGATCA+CGG + Chr4:2205928-2205947 MsG0480018249.01.T01:CDS 45.0%
GACTCCTGGAATGTGAGTTT+AGG + Chr4:2206150-2206169 MsG0480018249.01.T01:intron 45.0%
GCCATGGGAAACTTATGTTG+AGG + Chr4:2204189-2204208 MsG0480018249.01.T01:intron 45.0%
GCTGATGATCAACAGGCATT+GGG - Chr4:2205836-2205855 None:intergenic 45.0%
GGAATGATGATCAGGAGGAT+GGG - Chr4:2204364-2204383 None:intergenic 45.0%
GGTTTAGGCATGTAGAGAGA+AGG + Chr4:2203295-2203314 MsG0480018249.01.T01:intron 45.0%
GTGTTTCAGGCAGTTAACAG+AGG + Chr4:2206079-2206098 MsG0480018249.01.T01:intron 45.0%
TAGAGAATCGGATTTAGCGG+CGG - Chr4:2202631-2202650 None:intergenic 45.0%
TCAGAAATGCGAAGAGTCAC+TGG + Chr4:2205336-2205355 MsG0480018249.01.T01:CDS 45.0%
TCTGCTCAGTGCCTAATTCA+AGG + Chr4:2206557-2206576 MsG0480018249.01.T01:CDS 45.0%
TGAATAAACTCGTCACCAGG+AGG - Chr4:2202978-2202997 None:intergenic 45.0%
TGAGGGATAGTGATCTCAAC+GGG - Chr4:2206309-2206328 None:intergenic 45.0%
TGCTGATGATCAACAGGCAT+TGG - Chr4:2205837-2205856 None:intergenic 45.0%
TGGAATGATGATCAGGAGGA+TGG - Chr4:2204365-2204384 None:intergenic 45.0%
TTGGCCTGTATAAAGGAGGA+GGG - Chr4:2205698-2205717 None:intergenic 45.0%
TTTCCTGATCCTCAGATCTC+TGG + Chr4:2206452-2206471 MsG0480018249.01.T01:intron 45.0%
! ACTTAGGTGGTTTGGGCATA+TGG + Chr4:2203892-2203911 MsG0480018249.01.T01:intron 45.0%
! CATGGTCGACTTACAGAGAT+TGG + Chr4:2205225-2205244 MsG0480018249.01.T01:CDS 45.0%
! CTGATGATCAACAGGCATTG+GGG - Chr4:2205835-2205854 None:intergenic 45.0%
! CTTAGGTGGTTTGGGCATAT+GGG + Chr4:2203893-2203912 MsG0480018249.01.T01:intron 45.0%
! GAAGGACTGGTGATTGTATC+TGG + Chr4:2206515-2206534 MsG0480018249.01.T01:CDS 45.0%
! GATCCCTCTTTGGCTTAGAT+GGG + Chr4:2203691-2203710 MsG0480018249.01.T01:intron 45.0%
! GTGCTAAGCTTTGACTTAGG+TGG + Chr4:2203879-2203898 MsG0480018249.01.T01:intron 45.0%
! TATTGGGAAAGGTGGTTCTG+TGG + Chr4:2204497-2204516 MsG0480018249.01.T01:CDS 45.0%
! TCCTGGTGACGAGTTTATTC+AGG + Chr4:2202977-2202996 MsG0480018249.01.T01:CDS 45.0%
! TGATCCCTCTTTGGCTTAGA+TGG + Chr4:2203690-2203709 MsG0480018249.01.T01:intron 45.0%
! TGCGCAGCTTGCTTTGATTA+GGG + Chr4:2202764-2202783 MsG0480018249.01.T01:CDS 45.0%
! TTAGGTGGTTTGGGCATATG+GGG + Chr4:2203894-2203913 MsG0480018249.01.T01:intron 45.0%
! TTTTCACATGGTATGGGTCG+CGG + Chr4:2205861-2205880 MsG0480018249.01.T01:CDS 45.0%
!! GGTAGTCTTATTGGGAAAGG+TGG + Chr4:2204489-2204508 MsG0480018249.01.T01:CDS 45.0%
!! TGATGATCAACAGGCATTGG+GGG - Chr4:2205834-2205853 None:intergenic 45.0%
!!! GGTGGTTTTAAATCGTCTGG+TGG + Chr4:2204306-2204325 MsG0480018249.01.T01:CDS 45.0%
!! TTATTGTAAAAAAAAAAAAA+TGG + Chr4:2203814-2203833 MsG0480018249.01.T01:intron 5.0%
AATCAAAGCAAGCTGCGCAG+CGG - Chr4:2202763-2202782 None:intergenic 50.0%
ACAAAGTGGAGTCGGCTACA+TGG - Chr4:2203476-2203495 None:intergenic 50.0%
ACACCCCTCCTCCTTTATAC+AGG + Chr4:2205691-2205710 MsG0480018249.01.T01:CDS 50.0%
ACCACACGCTCATCTGAATC+GGG - Chr4:2204576-2204595 None:intergenic 50.0%
ACCTGAGGATTCCGTGATCT+TGG - Chr4:2205942-2205961 None:intergenic 50.0%
ACGAGCATGTTGGCATCTGT+TGG + Chr4:2205052-2205071 MsG0480018249.01.T01:intron 50.0%
ACGTTTGCACCAGAGATCTG+AGG - Chr4:2206464-2206483 None:intergenic 50.0%
ACTGCCCATCTAAGCCAAAG+AGG - Chr4:2203698-2203717 None:intergenic 50.0%
AGAATGCGGAAAACGGTGTC+GGG - Chr4:2202603-2202622 None:intergenic 50.0%
ATAAACTCGTCACCAGGAGG+AGG - Chr4:2202975-2202994 None:intergenic 50.0%
ATCCTCCTCCTCTTCCTCAT+GGG + Chr4:2205742-2205761 MsG0480018249.01.T01:CDS 50.0%
ATCGGAGGAAGTGACATCTC+CGG - Chr4:2202700-2202719 None:intergenic 50.0%
CAGAGGAAATTCAGGGGCAA+CGG + Chr4:2206096-2206115 MsG0480018249.01.T01:CDS 50.0%
CATGGAATTGACCATCCAGC+TGG + Chr4:2205807-2205826 MsG0480018249.01.T01:CDS 50.0%
CATTCTCCTATTCCTCCTCC+TGG + Chr4:2202960-2202979 MsG0480018249.01.T01:CDS 50.0%
CCAGGAGTCCCATTTCTTGA+AGG - Chr4:2206139-2206158 None:intergenic 50.0%
CCTCCTGATCATCATTCCAG+AGG + Chr4:2204366-2204385 MsG0480018249.01.T01:CDS 50.0%
CCTTCAAGAAATGGGACTCC+TGG + Chr4:2206136-2206155 MsG0480018249.01.T01:CDS 50.0%
CGAAGAACAGCATCTTGAGC+AGG - Chr4:2205201-2205220 None:intergenic 50.0%
CGACTCCACTTTGTGGGATA+AGG + Chr4:2203482-2203501 MsG0480018249.01.T01:intron 50.0%
CGAGCATGTTGGCATCTGTT+GGG + Chr4:2205053-2205072 MsG0480018249.01.T01:intron 50.0%
CGCAGTTTCAAGCTGTCTTC+AGG + Chr4:2204266-2204285 MsG0480018249.01.T01:CDS 50.0%
CTGCCCATCTAAGCCAAAGA+GGG - Chr4:2203697-2203716 None:intergenic 50.0%
CTTGGCCTGTATAAAGGAGG+AGG - Chr4:2205699-2205718 None:intergenic 50.0%
GACCACACGCTCATCTGAAT+CGG - Chr4:2204577-2204596 None:intergenic 50.0%
GAGAATGCGGAAAACGGTGT+CGG - Chr4:2202604-2202623 None:intergenic 50.0%
GATCGAGTTCCTTATCCTCG+TGG + Chr4:2205897-2205916 MsG0480018249.01.T01:CDS 50.0%
GATGCTGTTCTTCGCGTTCA+TGG + Chr4:2205207-2205226 MsG0480018249.01.T01:CDS 50.0%
GATTCTCTACTCTCCCTCTC+CGG + Chr4:2202642-2202661 MsG0480018249.01.T01:CDS 50.0%
GCTGGATGGTCAATTCCATG+AGG - Chr4:2205807-2205826 None:intergenic 50.0%
GGAACTCGATCCATGTTTGG+CGG - Chr4:2205888-2205907 None:intergenic 50.0%
GGAGAGGGAGAGTAGAGAAT+CGG - Chr4:2202643-2202662 None:intergenic 50.0%
GGATGGTCAATTCCATGAGG+AGG - Chr4:2205804-2205823 None:intergenic 50.0%
GGCACAGAGAATGCGGAAAA+CGG - Chr4:2202610-2202629 None:intergenic 50.0%
GGTGGTGCACCAAAATTTGG+AGG - Chr4:2205649-2205668 None:intergenic 50.0%
GTTGGTTGTGTGCTTGGTAG+AGG + Chr4:2202873-2202892 MsG0480018249.01.T01:CDS 50.0%
TAGGCAAGAAAGTGGTGCTC+AGG + Chr4:2202917-2202936 MsG0480018249.01.T01:CDS 50.0%
TAGTGCGTTCACCACAGGTA+GGG + Chr4:2205283-2205302 MsG0480018249.01.T01:CDS 50.0%
TCAATCCCATGAGGAAGAGG+AGG - Chr4:2205750-2205769 None:intergenic 50.0%
TCAATTCCATGAGGAGGTGG+AGG - Chr4:2205798-2205817 None:intergenic 50.0%
TCAGATCTCTGGTGCAAACG+TGG + Chr4:2206463-2206482 MsG0480018249.01.T01:intron 50.0%
TCCAAGATCACGGAATCCTC+AGG + Chr4:2205938-2205957 MsG0480018249.01.T01:CDS 50.0%
TGGCCTGTATAAAGGAGGAG+GGG - Chr4:2205697-2205716 None:intergenic 50.0%
TGGTCAATCCCATGAGGAAG+AGG - Chr4:2205753-2205772 None:intergenic 50.0%
TGGTCAATTCCATGAGGAGG+TGG - Chr4:2205801-2205820 None:intergenic 50.0%
TGTTGTTCTCCCCGTACACA+TGG - Chr4:2206344-2206363 None:intergenic 50.0%
TTGGGTCCTTCATAACCACG+AGG - Chr4:2205915-2205934 None:intergenic 50.0%
! ACCATTGATAGCTGGCTCTC+TGG + Chr4:2204845-2204864 MsG0480018249.01.T01:intron 50.0%
! ATGTAGCCGACTCCACTTTG+TGG + Chr4:2203475-2203494 MsG0480018249.01.T01:intron 50.0%
! CGTTGTTATTATCTCCGCCG+CGG + Chr4:2202728-2202747 MsG0480018249.01.T01:CDS 50.0%
! CTGCGCAGCTTGCTTTGATT+AGG + Chr4:2202763-2202782 MsG0480018249.01.T01:CDS 50.0%
! GGTGGTGGTGCACCAAAATT+TGG - Chr4:2205652-2205671 None:intergenic 50.0%
! TGTAGCCGACTCCACTTTGT+GGG + Chr4:2203476-2203495 MsG0480018249.01.T01:intron 50.0%
! TTCTTGAAAGCACGAAGGGC+AGG - Chr4:2206037-2206056 None:intergenic 50.0%
!! CCTCTGGAATGATGATCAGG+AGG - Chr4:2204369-2204388 None:intergenic 50.0%
AACAACGATGCGGTCATCGG+AGG - Chr4:2202715-2202734 None:intergenic 55.0%
ACCCGATTCAGATGAGCGTG+TGG + Chr4:2204572-2204591 MsG0480018249.01.T01:CDS 55.0%
AGAGGAGGAGGATGTCCAGA+AGG - Chr4:2205735-2205754 None:intergenic 55.0%
ATCCCATGAGGAAGAGGAGG+AGG - Chr4:2205747-2205766 None:intergenic 55.0%
ATTCCATGAGGAGGTGGAGG+AGG - Chr4:2205795-2205814 None:intergenic 55.0%
CATCCTCCTCCTCTTCCTCA+TGG + Chr4:2205741-2205760 MsG0480018249.01.T01:CDS 55.0%
CATGGGATTGACCATCCAGC+TGG + Chr4:2205759-2205778 MsG0480018249.01.T01:CDS 55.0%
CCAATACCTGGGGCAACAGA+AGG + Chr4:2206497-2206516 MsG0480018249.01.T01:CDS 55.0%
CCTTCTGTTGCCCCAGGTAT+TGG - Chr4:2206500-2206519 None:intergenic 55.0%
CTACCTGTGGTGAACGCACT+AGG - Chr4:2205284-2205303 None:intergenic 55.0%
CTAGTGCGTTCACCACAGGT+AGG + Chr4:2205282-2205301 MsG0480018249.01.T01:CDS 55.0%
GAAGGGCAGGCACAAGAAGA+AGG - Chr4:2206024-2206043 None:intergenic 55.0%
GAGGATCAACATAGCGCCTG+TGG + Chr4:2203847-2203866 MsG0480018249.01.T01:intron 55.0%
GCACCAGAGATCTGAGGATC+AGG - Chr4:2206458-2206477 None:intergenic 55.0%
GCCAGAGAGCCAGCTATCAA+TGG - Chr4:2204849-2204868 None:intergenic 55.0%
GCTGGATGGTCAATCCCATG+AGG - Chr4:2205759-2205778 None:intergenic 55.0%
GGTCGTCATATCTGCGCTAG+AGG + Chr4:2204593-2204612 MsG0480018249.01.T01:CDS 55.0%
GGTCTAGCACTCTCAGAACC+CGG - Chr4:2204405-2204424 None:intergenic 55.0%
GGTTGTGTGCTTGGTAGAGG+TGG + Chr4:2202876-2202895 MsG0480018249.01.T01:CDS 55.0%
TAGAATCTTGACGCCGTCGC+CGG - Chr4:2202664-2202683 None:intergenic 55.0%
TCGTCACCAGGAGGAGGAAT+AGG - Chr4:2202969-2202988 None:intergenic 55.0%
TGGGGAACCCGTTGAGGATA+AGG - Chr4:2204345-2204364 None:intergenic 55.0%
! ATCGTCTGGTGGTGCTCAAG+TGG + Chr4:2204317-2204336 MsG0480018249.01.T01:CDS 55.0%
! GAAAGGTGGTTCTGTGGTGC+GGG + Chr4:2204503-2204522 MsG0480018249.01.T01:CDS 55.0%
! GGAAAGGTGGTTCTGTGGTG+CGG + Chr4:2204502-2204521 MsG0480018249.01.T01:CDS 55.0%
!! AAAGGAGGAGGGGTGTCTCT+GGG - Chr4:2205687-2205706 None:intergenic 55.0%
!! ACGGTGTCGGGTTGAGTTTG+AGG - Chr4:2202591-2202610 None:intergenic 55.0%
!! TAAAGGAGGAGGGGTGTCTC+TGG - Chr4:2205688-2205707 None:intergenic 55.0%
ACCAGTCCTTCTGTTGCCCC+AGG - Chr4:2206506-2206525 None:intergenic 60.0%
ACCTGGGGCAACAGAAGGAC+TGG + Chr4:2206502-2206521 MsG0480018249.01.T01:CDS 60.0%
ATGCCTCCTCCACCTCCTCA+TGG + Chr4:2205789-2205808 MsG0480018249.01.T01:CDS 60.0%
CATGACCTCCCTTGCCCAAG+AGG - Chr4:2205311-2205330 None:intergenic 60.0%
GCATAGGTGGACCAGCTGGA+TGG - Chr4:2205773-2205792 None:intergenic 60.0%
GCTCCTAGTGCGTTCACCAC+AGG + Chr4:2205278-2205297 MsG0480018249.01.T01:CDS 60.0%
TAGCGGCGGCACAGAGAATG+CGG - Chr4:2202617-2202636 None:intergenic 60.0%
! AAGCTGCGCAGCGGATTCCT+CGG - Chr4:2202754-2202773 None:intergenic 60.0%
! ACCACAGGTAGGGTGCCTCT+TGG + Chr4:2205293-2205312 MsG0480018249.01.T01:CDS 60.0%
! CCACAGGTAGGGTGCCTCTT+GGG + Chr4:2205294-2205313 MsG0480018249.01.T01:CDS 60.0%
! GGTGGTTTGGGCATATGGGG+AGG + Chr4:2203897-2203916 MsG0480018249.01.T01:intron 60.0%
! GTAGGGTGCCTCTTGGGCAA+GGG + Chr4:2205300-2205319 MsG0480018249.01.T01:CDS 60.0%
! TGAGGAGGTGGAGGAGGCAT+AGG - Chr4:2205789-2205808 None:intergenic 60.0%
!! AGGAGGGGTGTCTCTGGGAA+CGG - Chr4:2205682-2205701 None:intergenic 60.0%
CTACTCTCCCTCTCCGGCGA+CGG + Chr4:2202648-2202667 MsG0480018249.01.T01:CDS 65.0%
GCATTGGGGGACCAGCTGGA+TGG - Chr4:2205821-2205840 None:intergenic 65.0%
GGAGGATGGGGAACCCGTTG+AGG - Chr4:2204351-2204370 None:intergenic 65.0%
TATTATCTCCGCCGCGGCCG+AGG + Chr4:2202734-2202753 MsG0480018249.01.T01:CDS 65.0%
TCTGGGAACGGTGGCACAGG+TGG - Chr4:2205670-2205689 None:intergenic 65.0%
! GGAGGCATAGGTGGACCAGC+TGG - Chr4:2205777-2205796 None:intergenic 65.0%
! GGAGGTGGAGGAGGCATAGG+TGG - Chr4:2205786-2205805 None:intergenic 65.0%
! GGTAGGGTGCCTCTTGGGCA+AGG + Chr4:2205299-2205318 MsG0480018249.01.T01:CDS 65.0%
! GTCTCTGGGAACGGTGGCAC+AGG - Chr4:2205673-2205692 None:intergenic 65.0%
!! ACAGGCATTGGGGGACCAGC+TGG - Chr4:2205825-2205844 None:intergenic 65.0%
!! AGGGGTGTCTCTGGGAACGG+TGG - Chr4:2205679-2205698 None:intergenic 65.0%
!! CCCAAGAGGCACCCTACCTG+TGG - Chr4:2205297-2205316 None:intergenic 65.0%
CTTGACGCCGTCGCCGGAGA+GGG - Chr4:2202658-2202677 None:intergenic 70.0%
GGGAACGGTGGCACAGGTGG+TGG - Chr4:2205667-2205686 None:intergenic 70.0%
GGGTCGCGGTCCGCCAAACA+TGG + Chr4:2205875-2205894 MsG0480018249.01.T01:CDS 70.0%
GGGTGCCTCTTGGGCAAGGG+AGG + Chr4:2205303-2205322 MsG0480018249.01.T01:CDS 70.0%
TCTTGACGCCGTCGCCGGAG+AGG - Chr4:2202659-2202678 None:intergenic 70.0%
! AGCGGATTCCTCGGCCGCGG+CGG - Chr4:2202745-2202764 None:intergenic 75.0%
! CGCAGCGGATTCCTCGGCCG+CGG - Chr4:2202748-2202767 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 2202415 2206871 2202415 ID=MsG0480018249.01;Name=MsG0480018249.01
Chr4 mRNA 2202415 2206871 2202415 ID=MsG0480018249.01.T01;Parent=MsG0480018249.01;Name=MsG0480018249.01.T01;_AED=0.28;_eAED=0.28;_QI=134|0.83|0.85|1|1|1|7|261|617
Chr4 exon 2202415 2202998 2202415 ID=MsG0480018249.01.T01:exon:1077;Parent=MsG0480018249.01.T01
Chr4 exon 2204228 2204614 2204228 ID=MsG0480018249.01.T01:exon:1078;Parent=MsG0480018249.01.T01
Chr4 exon 2205177 2205459 2205177 ID=MsG0480018249.01.T01:exon:1079;Parent=MsG0480018249.01.T01
Chr4 exon 2205559 2205959 2205559 ID=MsG0480018249.01.T01:exon:1080;Parent=MsG0480018249.01.T01
Chr4 exon 2206088 2206161 2206088 ID=MsG0480018249.01.T01:exon:1081;Parent=MsG0480018249.01.T01
Chr4 exon 2206272 2206386 2206272 ID=MsG0480018249.01.T01:exon:1082;Parent=MsG0480018249.01.T01
Chr4 exon 2206467 2206871 2206467 ID=MsG0480018249.01.T01:exon:1083;Parent=MsG0480018249.01.T01
Chr4 five_prime_UTR 2202415 2202548 2202415 ID=MsG0480018249.01.T01:five_prime_utr;Parent=MsG0480018249.01.T01
Chr4 CDS 2202549 2202998 2202549 ID=MsG0480018249.01.T01:cds;Parent=MsG0480018249.01.T01
Chr4 CDS 2204228 2204614 2204228 ID=MsG0480018249.01.T01:cds;Parent=MsG0480018249.01.T01
Chr4 CDS 2205177 2205459 2205177 ID=MsG0480018249.01.T01:cds;Parent=MsG0480018249.01.T01
Chr4 CDS 2205559 2205959 2205559 ID=MsG0480018249.01.T01:cds;Parent=MsG0480018249.01.T01
Chr4 CDS 2206088 2206161 2206088 ID=MsG0480018249.01.T01:cds;Parent=MsG0480018249.01.T01
Chr4 CDS 2206272 2206386 2206272 ID=MsG0480018249.01.T01:cds;Parent=MsG0480018249.01.T01
Chr4 CDS 2206467 2206610 2206467 ID=MsG0480018249.01.T01:cds;Parent=MsG0480018249.01.T01
Chr4 three_prime_UTR 2206611 2206871 2206611 ID=MsG0480018249.01.T01:three_prime_utr;Parent=MsG0480018249.01.T01
Gene Sequence

>MsG0480018249.01.T01

ATGTCAAACAACAACAACAACAACAAACGACGCTATGTTCCTCAAACTCAACCCGACACCGTTTTCCGCATTCTCTGTGCCGCCGCTAAATCCGATTCTCTACTCTCCCTCTCCGGCGACGGCGTCAAGATTCTAATTGACGACTTCGCCGGAGATGTCACTTCCTCCGATGACCGCATCGTTGTTATTATCTCCGCCGCGGCCGAGGAATCCGCTGCGCAGCTTGCTTTGATTAGGGTTTTTGAGAGAATGGTGGAGAAGGATAATAATGAGGAGAATAATAAGAAATCGGTTGGGTGTAGATTGTTAGCACCTAGTTATCAAGTTGGTTGTGTGCTTGGTAGAGGTGGTAAGATTATTGAAAAGATTAGGCAAGAAAGTGGTGCTCAGGTTAGGATTTTGCCTAAAGATCATTCTCCTATTCCTCCTCCTGGTGACGAGTTTATTCAGATAACCGGAAATTTTAACGCAGTAAAGAAAGCACTTCTCGCAGTTTCAAGCTGTCTTCAGGATAATGTAGGCAATTCTGGTGGTTTTAAATCGTCTGGTGGTGCTCAAGTGGAACCTTATCCTCAACGGGTTCCCCATCCTCCTGATCATCATTCCAGAGGTTATTCTTCTTTTCCGGGTTCTGAGAGTGCTAGACCTGCTCATAGAATGTTTGTGGAAGAGGAAGTTGTCTATAAGATGTTGTGTCAGCAAGATAAAGTTGGTAGTCTTATTGGGAAAGGTGGTTCTGTGGTGCGGGCTTTACAAAACGAAACTGGTGCATCTATACAAATAGTTGATGCTGGACCCGATTCAGATGAGCGTGTGGTCGTCATATCTGCGCTAGAGAATTCTGAGCAAAAGCATTCTCCTGCTCAAGATGCTGTTCTTCGCGTTCATGGTCGACTTACAGAGATTGGATTTGAGCATAGTAATGCAGTTGTTGCTAGGCTCCTAGTGCGTTCACCACAGGTAGGGTGCCTCTTGGGCAAGGGAGGTCATGTTATCTCAGAAATGCGAAGAGTCACTGGTGCCAATATACGTATCTTTTCGAAGGAACAGATCAAGTACATTTCTCACAATGAAGAAGTTGTACAGGTAATTTGCACTTTACACATTTGCAATGTTAACTGTTATTGGGACCATACAATCTGTGCAAGATGCTTTGTTTCACATAACCAGCAGAATTCGAGAAACTATTATCCCAATGAAGAACACTCCTCCAAATTTTGGTGCACCACCACCTGTGCCACCGTTCCCAGAGACACCCCTCCTCCTTTATACAGGCCAAGAAATCACATGTTGCCTTCTGGACATCCTCCTCCTCTTCCTCATGGGATTGACCATCCAGCTGGTCCACCTATGCCTCCTCCACCTCCTCATGGAATTGACCATCCAGCTGGTCCCCCAATGCCTGTTGATCATCAGCATGCATTTTCACATGGTATGGGTCGCGGTCCGCCAAACATGGATCGAGTTCCTTATCCTCGTGGTTATGAAGGACCCAATTCTCCAAGATCACGGAATCCTCAGGCAGTTAACAGAGGAAATTCAGGGGCAACGGCTGATAGTTTTAATTTGCCTTCAAGAAATGGGACTCCTGGAATGACTGGAAACTCATTACAGAATCCAAATAACTCACCCGTTGAGATCACTATCCCTCATATGTATTTAATCCATGTGTACGGGGAGAACAACAGCACCCTAAATCAAATTCGACAGATCTCTGGTGCAAACGTGGTTGTTCATGATCCAATACCTGGGGCAACAGAAGGACTGGTGATTGTATCTGGAACACATGATCAAATTCACTCTGCTCAGTGCCTAATTCAAGGTTTTATTTTTTGCGGACTGACTGCACCTTAG
Protein sequence

>MsG0480018249.01.T01

MSNNNNNNKRRYVPQTQPDTVFRILCAAAKSDSLLSLSGDGVKILIDDFAGDVTSSDDRIVVIISAAAEESAAQLALIRVFERMVEKDNNEENNKKSVGCRLLAPSYQVGCVLGRGGKIIEKIRQESGAQVRILPKDHSPIPPPGDEFIQITGNFNAVKKALLAVSSCLQDNVGNSGGFKSSGGAQVEPYPQRVPHPPDHHSRGYSSFPGSESARPAHRMFVEEEVVYKMLCQQDKVGSLIGKGGSVVRALQNETGASIQIVDAGPDSDERVVVISALENSEQKHSPAQDAVLRVHGRLTEIGFEHSNAVVARLLVRSPQVGCLLGKGGHVISEMRRVTGANIRIFSKEQIKYISHNEEVVQVICTLHICNVNCYWDHTICARCFVSHNQQNSRNYYPNEEHSSKFWCTTTCATVPRDTPPPLYRPRNHMLPSGHPPPLPHGIDHPAGPPMPPPPPHGIDHPAGPPMPVDHQHAFSHGMGRGPPNMDRVPYPRGYEGPNSPRSRNPQAVNRGNSGATADSFNLPSRNGTPGMTGNSLQNPNNSPVEITIPHMYLIHVYGENNSTLNQIRQISGANVVVHDPIPGATEGLVIVSGTHDQIHSAQCLIQGFIFCGLTAP*