Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0130010 | KEH43305.1 | 94.257 | 592 | 32 | 1 | 16 | 605 | 16 | 607 | 0.0 | 1137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0130010 | A0A072VZ22 | 94.257 | 592 | 32 | 1 | 16 | 605 | 16 | 607 | 0.0 | 1137 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005050 | Msa0130010 | 0.830771 | 2.433668e-55 | -8.615850e-47 |
| Msa0012440 | Msa0130010 | 0.821377 | 4.170467e-53 | -8.615850e-47 |
| Msa0036430 | Msa0130010 | 0.807222 | 5.615685e-50 | -8.615850e-47 |
| Msa0050040 | Msa0130010 | 0.821417 | 4.082552e-53 | -8.615850e-47 |
| Msa0050990 | Msa0130010 | 0.807932 | 3.970204e-50 | -8.615850e-47 |
| Msa0053110 | Msa0130010 | 0.827562 | 1.461244e-54 | -8.615850e-47 |
| Msa0057240 | Msa0130010 | 0.810454 | 1.143758e-50 | -8.615850e-47 |
| Msa0083920 | Msa0130010 | 0.810004 | 1.429696e-50 | -8.615850e-47 |
| Msa0084500 | Msa0130010 | 0.819355 | 1.213118e-52 | -8.615850e-47 |
| Msa0098440 | Msa0130010 | 0.815206 | 1.041235e-51 | -8.615850e-47 |
| Msa0102990 | Msa0130010 | 0.821093 | 4.848067e-53 | -8.615850e-47 |
| Msa0130010 | Msa0149560 | 0.814809 | 1.274966e-51 | -8.615850e-47 |
| Msa0130010 | Msa0161100 | 0.828073 | 1.100752e-54 | -8.615850e-47 |
| Msa0130010 | Msa0161210 | 0.806706 | 7.221153e-50 | -8.615850e-47 |
| Msa0130010 | Msa0219190 | 0.856513 | 3.058197e-62 | -8.615850e-47 |
| Msa0130010 | Msa0235890 | 0.818944 | 1.504970e-52 | -8.615850e-47 |
| Msa0130010 | Msa0298240 | 0.873844 | 1.073272e-67 | -8.615850e-47 |
| Msa0130010 | Msa0323610 | 0.819837 | 9.418518e-53 | -8.615850e-47 |
| Msa0130010 | Msa0331540 | 0.809763 | 1.611526e-50 | -8.615850e-47 |
| Msa0130010 | Msa0362780 | 0.801507 | 8.714785e-49 | -8.615850e-47 |
| Msa0130010 | Msa0371540 | 0.808636 | 2.810163e-50 | -8.615850e-47 |
| Msa0130010 | Msa0408630 | 0.820380 | 7.071150e-53 | -8.615850e-47 |
| Msa0130010 | Msa0413930 | 0.820278 | 7.462805e-53 | -8.615850e-47 |
| Msa0130010 | Msa0419970 | 0.809342 | 1.984291e-50 | -8.615850e-47 |
| Msa0130010 | Msa0420540 | 0.817378 | 3.401905e-52 | -8.615850e-47 |
| Msa0130010 | Msa0426330 | 0.800881 | 1.170355e-48 | -8.615850e-47 |
| Msa0130010 | Msa0436460 | 0.803382 | 3.581046e-49 | -8.615850e-47 |
| Msa0130010 | Msa0436500 | 0.827468 | 1.539009e-54 | -8.615850e-47 |
| Msa0130010 | Msa0453520 | 0.854609 | 1.098443e-61 | -8.615850e-47 |
| Msa0130010 | Msa0458950 | 0.804232 | 2.384523e-49 | -8.615850e-47 |
| Msa0130010 | Msa0461720 | 0.813786 | 2.145856e-51 | -8.615850e-47 |
| Msa0130010 | Msa0466060 | 0.804477 | 2.120432e-49 | -8.615850e-47 |
| Msa0130010 | Msa0517340 | 0.807597 | 4.676501e-50 | -8.615850e-47 |
| Msa0130010 | Msa0537920 | 0.829295 | 5.576012e-55 | -8.615850e-47 |
| Msa0130010 | Msa0538060 | 0.818363 | 2.038038e-52 | -8.615850e-47 |
| Msa0130010 | Msa0538220 | 0.818910 | 1.531452e-52 | -8.615850e-47 |
| Msa0130010 | Msa0543850 | 0.805591 | 1.239510e-49 | -8.615850e-47 |
| Msa0130010 | Msa0585730 | 0.815788 | 7.724042e-52 | -8.615850e-47 |
| Msa0130010 | Msa0625890 | 0.843042 | 1.786893e-58 | -8.615850e-47 |
| Msa0130010 | Msa0663590 | 0.809556 | 1.785012e-50 | -8.615850e-47 |
| Msa0130010 | Msa0663680 | 0.854579 | 1.120650e-61 | -8.615850e-47 |
| Msa0130010 | Msa0680150 | 0.845119 | 4.954590e-59 | -8.615850e-47 |
| Msa0130010 | Msa0688500 | 0.829727 | 4.378586e-55 | -8.615850e-47 |
| Msa0130010 | Msa0706370 | 0.822961 | 1.789866e-53 | -8.615850e-47 |
| Msa0130010 | Msa0707220 | 0.805453 | 1.324991e-49 | -8.615850e-47 |
| Msa0130010 | Msa0737190 | 0.826208 | 3.076529e-54 | -8.615850e-47 |
| Msa0130010 | Msa0747780 | 0.836323 | 1.000873e-56 | -8.615850e-47 |
| Msa0130010 | Msa0754030 | 0.841459 | 4.691080e-58 | -8.615850e-47 |
| Msa0130010 | Msa0757870 | 0.806658 | 7.393118e-50 | -8.615850e-47 |
| Msa0130010 | Msa0761580 | 0.814711 | 1.340510e-51 | -8.615850e-47 |
| Msa0130010 | Msa0770290 | 0.804750 | 1.859721e-49 | -8.615850e-47 |
| Msa0130010 | Msa0778930 | 0.823047 | 1.708969e-53 | -8.615850e-47 |
| Msa0130010 | Msa0807110 | 0.841888 | 3.615161e-58 | -8.615850e-47 |
| Msa0130010 | Msa0816450 | 0.827093 | 1.891988e-54 | -8.615850e-47 |
| Msa0130010 | Msa0833040 | 0.842397 | 2.650955e-58 | -8.615850e-47 |
| Msa0130010 | Msa0862100 | 0.822005 | 2.985739e-53 | -8.615850e-47 |
| Msa0130010 | Msa0867350 | 0.813914 | 2.010464e-51 | -8.615850e-47 |
| Msa0130010 | Msa0870620 | 0.806901 | 6.567659e-50 | -8.615850e-47 |
| Msa0130010 | Msa0872310 | 0.822047 | 2.918558e-53 | -8.615850e-47 |
| Msa0130010 | Msa0873190 | 0.806955 | 6.397988e-50 | -8.615850e-47 |
| Msa0130010 | Msa0885060 | 0.813562 | 2.403481e-51 | -8.615850e-47 |
| Msa0130010 | Msa0898730 | 0.804402 | 2.198068e-49 | -8.615850e-47 |
| Msa0130010 | Msa0905550 | 0.803533 | 3.330928e-49 | -8.615850e-47 |
| Msa0130010 | Msa0937550 | 0.810848 | 9.398479e-51 | -8.615850e-47 |
| Msa0130010 | Msa0946320 | 0.801624 | 8.245979e-49 | -8.615850e-47 |
| Msa0130010 | Msa1007350 | 0.815019 | 1.145637e-51 | -8.615850e-47 |
| Msa0130010 | Msa1032450 | 0.812408 | 4.303920e-51 | -8.615850e-47 |
| Msa0130010 | Msa1037890 | 0.809132 | 2.201247e-50 | -8.615850e-47 |
| Msa0130010 | Msa1037900 | 0.827161 | 1.822843e-54 | -8.615850e-47 |
| Msa0130010 | Msa1037910 | 0.815779 | 7.759490e-52 | -8.615850e-47 |
| Msa0130010 | Msa1037920 | 0.819878 | 9.213651e-53 | -8.615850e-47 |
| Msa0130010 | Msa1041530 | 0.840449 | 8.640152e-58 | -8.615850e-47 |
| Msa0130010 | Msa1049010 | 0.831562 | 1.555589e-55 | -8.615850e-47 |
| Msa0130010 | Msa1070420 | 0.848494 | 5.913438e-60 | -8.615850e-47 |
| Msa0130010 | Msa1081570 | 0.827908 | 1.206297e-54 | -8.615850e-47 |
| Msa0130010 | Msa1123880 | 0.827086 | 1.900112e-54 | -8.615850e-47 |
| Msa0130010 | Msa1127140 | 0.837203 | 5.970240e-57 | -8.615850e-47 |
| Msa0130010 | Msa1129960 | 0.829081 | 6.285551e-55 | -8.615850e-47 |
| Msa0130010 | Msa1129970 | 0.818953 | 1.497496e-52 | -8.615850e-47 |
| Msa0130010 | Msa1136230 | 0.806297 | 8.807957e-50 | -8.615850e-47 |
| Msa0130010 | Msa1166400 | 0.829049 | 6.395569e-55 | -8.615850e-47 |
| Msa0130010 | Msa1169990 | 0.813957 | 1.967670e-51 | -8.615850e-47 |
| Msa0130010 | Msa1176160 | 0.834498 | 2.895589e-56 | -8.615850e-47 |
| Msa0130010 | Msa1201110 | 0.807570 | 4.738466e-50 | -8.615850e-47 |
| Msa0130010 | Msa1201160 | 0.810199 | 1.297659e-50 | -8.615850e-47 |
| Msa0130010 | Msa1228610 | 0.812660 | 3.790957e-51 | -8.615850e-47 |
| Msa0130010 | Msa1277400 | 0.802592 | 5.214283e-49 | -8.615850e-47 |
| Msa0130010 | Msa1307190 | 0.830268 | 3.230745e-55 | -8.615850e-47 |
| Msa0130010 | Msa1348360 | 0.800414 | 1.457813e-48 | -8.615850e-47 |
| Msa0130010 | Msa1378770 | 0.807110 | 5.932018e-50 | -8.615850e-47 |
| Msa0130010 | Msa1379990 | 0.813789 | 2.142515e-51 | -8.615850e-47 |
| Msa0130010 | Msa1408870 | 0.841703 | 4.044934e-58 | -8.615850e-47 |
| Msa0130010 | Msa1414930 | 0.803551 | 3.302849e-49 | -8.615850e-47 |
| Msa0130010 | Msa1420060 | 0.879287 | 1.409190e-69 | -8.615850e-47 |
| Msa0130010 | Msa1421550 | 0.819847 | 9.367715e-53 | -8.615850e-47 |
| Msa0130010 | Msa1429420 | 0.816803 | 4.580587e-52 | -8.615850e-47 |
| Msa0130010 | Msa1437710 | 0.831105 | 2.015740e-55 | -8.615850e-47 |
| Msa0130010 | Msa1449940 | 0.811197 | 7.897290e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0130010 | MtrunA17_Chr1g0197201 | 93.210 | 486 | 31 | 1 | 122 | 605 | 1 | 486 | 0.0 | 927 |
| Msa0130010 | MtrunA17_Chr1g0197241 | 46.934 | 424 | 208 | 7 | 10 | 431 | 15 | 423 | 6.77e-100 | 333 |
| Msa0130010 | MtrunA17_Chr1g0197241 | 45.148 | 237 | 100 | 8 | 370 | 604 | 485 | 693 | 2.96e-39 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 151 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTAATGCATGCATTTCTT+AGG | 0.192630 | 1_3:+60082368 | Msa0130010:CDS |
| GGTTGAAGAGTATGCGGTTT+TGG | 0.209747 | 1_3:+60081127 | Msa0130010:CDS |
| ATGAAGGATATGCTTTAGTA+TGG | 0.237046 | 1_3:+60081795 | Msa0130010:CDS |
| GCATTAAAGCTAAATCTCTT+TGG | 0.269423 | 1_3:-60082354 | None:intergenic |
| AGAGTCAGATGAGGTATATT+AGG | 0.278888 | 1_3:+60081825 | Msa0130010:CDS |
| TGAATGAAAGACAGAAAATA+TGG | 0.280603 | 1_3:+60082422 | Msa0130010:CDS |
| CCTCTTCCTCTCTGATTGAT+TGG | 0.284129 | 1_3:-60082837 | None:intergenic |
| GTCCCTGTTTCTCCCTCTTC+AGG | 0.292811 | 1_3:+60082237 | Msa0130010:CDS |
| TATATTAGGAGTTGTGAAAT+TGG | 0.294506 | 1_3:+60081839 | Msa0130010:CDS |
| CCGTGGAGAGCTTGATAGTA+TGG | 0.301762 | 1_3:+60081954 | Msa0130010:CDS |
| GAAGGACATCAATTGCTTCT+TGG | 0.311281 | 1_3:+60082537 | Msa0130010:CDS |
| AATCTCAATCACCTTATTAC+TGG | 0.315640 | 1_3:-60081576 | None:intergenic |
| TTACACTTATATTAATTTAC+CGG | 0.327363 | 1_3:+60082204 | Msa0130010:CDS |
| CTACCTGAAGAGGGAGAAAC+AGG | 0.331301 | 1_3:-60082240 | None:intergenic |
| TACCAAAACAAGGCGTAAAC+TGG | 0.333905 | 1_3:+60082111 | Msa0130010:CDS |
| AATATTTGAAATACCATATA+TGG | 0.340738 | 1_3:-60082590 | None:intergenic |
| CTGAGAATCGTGGCTCAAAA+TGG | 0.342223 | 1_3:+60082454 | Msa0130010:CDS |
| CTCCAGTTTACGCCTTGTTT+TGG | 0.345753 | 1_3:-60082113 | None:intergenic |
| TCCTCGTACCGACCTGTTAC+GGG | 0.346780 | 1_3:+60082799 | Msa0130010:CDS |
| GAGGAGGAAGCTGCTGGTTC+TGG | 0.350307 | 1_3:-60082781 | None:intergenic |
| CATTAAAGCTAAATCTCTTT+GGG | 0.354640 | 1_3:-60082353 | None:intergenic |
| AAGCTCTCCACGGACAAGTT+TGG | 0.356299 | 1_3:-60081944 | None:intergenic |
| GAAGCTGCTGGTTCTGGTGC+TGG | 0.357290 | 1_3:-60082775 | None:intergenic |
| CATATCCTTCATAAAGATAA+AGG | 0.363224 | 1_3:-60081784 | None:intergenic |
| TCTTCGTGCATGTTTATGCT+TGG | 0.368735 | 1_3:-60082691 | None:intergenic |
| CTTCGTGCATGTTTATGCTT+GGG | 0.370681 | 1_3:-60082690 | None:intergenic |
| TCCTGTTTGAGCCCCGTAAC+AGG | 0.371078 | 1_3:-60082811 | None:intergenic |
| AAGTTCCATCCTTGGTCATC+AGG | 0.378003 | 1_3:-60082022 | None:intergenic |
| CTCCTCGTACCGACCTGTTA+CGG | 0.380585 | 1_3:+60082798 | Msa0130010:CDS |
| TTTAATGCATGCATTTCTTA+GGG | 0.389330 | 1_3:+60082369 | Msa0130010:CDS |
| TGTGAAGTTGTGGAGGTCTA+TGG | 0.389446 | 1_3:+60082312 | Msa0130010:CDS |
| TCACACAGGAAGACCATATA+TGG | 0.398750 | 1_3:+60082577 | Msa0130010:CDS |
| CACTTCGTGATGTTATTGTC+TGG | 0.402204 | 1_3:+60082287 | Msa0130010:CDS |
| AAATTTAATAACCAGTAATA+AGG | 0.404155 | 1_3:+60081565 | Msa0130010:CDS |
| CAACAGTGTTGTTTATGCTT+GGG | 0.405652 | 1_3:-60082657 | None:intergenic |
| CCTTCTTGATACTGCTGCTA+AGG | 0.408361 | 1_3:+60082483 | Msa0130010:CDS |
| ACCTGTTACGGGGCTCAAAC+AGG | 0.414436 | 1_3:+60082810 | Msa0130010:CDS |
| TACTTCTACGATGGTGGAAC+AGG | 0.418439 | 1_3:-60081507 | None:intergenic |
| CACGAAGTGGAAAACACAAT+TGG | 0.418614 | 1_3:-60082273 | None:intergenic |
| TGGAGAAGCTTGATCAAATT+CGG | 0.423345 | 1_3:+60081534 | Msa0130010:CDS |
| CAATACTAAGAAGGCTGATC+CGG | 0.429359 | 1_3:+60082170 | Msa0130010:CDS |
| ATCAGTGGTTGCAAAATTCC+TGG | 0.432163 | 1_3:+60081106 | Msa0130010:CDS |
| ACAACAGTGTTGTTTATGCT+TGG | 0.433482 | 1_3:-60082658 | None:intergenic |
| AAGGTCCTTTATCTTTATGA+AGG | 0.434763 | 1_3:+60081779 | Msa0130010:CDS |
| GCAGCGCGGGGATGGAGAAC+AGG | 0.438660 | 1_3:+60081223 | Msa0130010:CDS |
| TTGTCTGGATTGTGAAGTTG+TGG | 0.439166 | 1_3:+60082302 | Msa0130010:CDS |
| ATCAGTGAAGAGGAGGAGGT+GGG | 0.452432 | 1_3:+60081328 | Msa0130010:CDS |
| CCAATCAATCAGAGAGGAAG+AGG | 0.455945 | 1_3:+60082837 | Msa0130010:CDS |
| GAAAATAATGAATTTAAACT+TGG | 0.466373 | 1_3:+60081430 | Msa0130010:CDS |
| CAGGTTGAGCAGCGCGGGGA+TGG | 0.466619 | 1_3:+60081215 | Msa0130010:CDS |
| CTGTTCCTGATGACCAAGGA+TGG | 0.471864 | 1_3:+60082017 | Msa0130010:CDS |
| CTGCTGCTAAGGGTGGTTGT+TGG | 0.473263 | 1_3:+60082494 | Msa0130010:CDS |
| AATCAGTGAAGAGGAGGAGG+TGG | 0.476471 | 1_3:+60081327 | Msa0130010:CDS |
| TAGAACAGGTTGAGCAGCGC+GGG | 0.477218 | 1_3:+60081210 | Msa0130010:CDS |
| GTTGAAACTCCCGTTGTAAG+AGG | 0.479721 | 1_3:+60081467 | Msa0130010:CDS |
| TCCACGGACAAGTTTGGAAC+GGG | 0.481457 | 1_3:-60081938 | None:intergenic |
| ATACAGCGAGGCACGTAGAA+TGG | 0.482831 | 1_3:+60081153 | Msa0130010:CDS |
| CGGTTACATTTCTAGAGATA+CGG | 0.484337 | 1_3:+60082744 | Msa0130010:CDS |
| GGTGCTTCTCCTCTTACAAC+GGG | 0.485948 | 1_3:-60081476 | None:intergenic |
| TCAGTGAAGAGGAGGAGGTG+GGG | 0.485983 | 1_3:+60081329 | Msa0130010:CDS |
| AAGAAGCAATTGATGTCCTT+CGG | 0.490837 | 1_3:-60082535 | None:intergenic |
| AATGAGAAGACGGGGAGAAA+AGG | 0.496743 | 1_3:+60082142 | Msa0130010:CDS |
| CTGCTAAGGGTGGTTGTTGG+AGG | 0.504566 | 1_3:+60082497 | Msa0130010:CDS |
| GAAAGAGCTGAGGTCAATGC+GGG | 0.505992 | 1_3:+60081181 | Msa0130010:CDS |
| CGGTGCTTCTCCTCTTACAA+CGG | 0.507363 | 1_3:-60081477 | None:intergenic |
| AGGGATGACTTACGGAGTTG+TGG | 0.510288 | 1_3:+60081877 | Msa0130010:CDS |
| TAATAAGGTGATTGAGATTG+TGG | 0.511886 | 1_3:+60081580 | Msa0130010:CDS |
| AATGGTTCAAAATGTATGGT+TGG | 0.511989 | 1_3:+60081753 | Msa0130010:CDS |
| GGGATGACTTACGGAGTTGT+GGG | 0.514510 | 1_3:+60081878 | Msa0130010:CDS |
| CATACAAGAAGTTCCATCCT+TGG | 0.514809 | 1_3:-60082030 | None:intergenic |
| AACAGGGACAGTATGAGAAC+CGG | 0.517184 | 1_3:-60082223 | None:intergenic |
| CGGTACGAGGAGGAAGCTGC+TGG | 0.517692 | 1_3:-60082787 | None:intergenic |
| CTTCAAAGAGGGATGACTTA+CGG | 0.519155 | 1_3:+60081869 | Msa0130010:CDS |
| GAGAAGACCAATGAGAAGAC+GGG | 0.520466 | 1_3:+60082133 | Msa0130010:CDS |
| AATGCGGGGATTGTTAGAAC+AGG | 0.523410 | 1_3:+60081196 | Msa0130010:CDS |
| CACCATCGTAGAAGTAGCTA+TGG | 0.525095 | 1_3:+60081514 | Msa0130010:CDS |
| AAGGAATAGCAATACTAAGA+AGG | 0.530117 | 1_3:+60082161 | Msa0130010:CDS |
| TAAAATCAGTGAAGAGGAGG+AGG | 0.533266 | 1_3:+60081324 | Msa0130010:CDS |
| CAAAATGTATGGTTGGAAGA+AGG | 0.534829 | 1_3:+60081760 | Msa0130010:CDS |
| CTTCTTGATACTGCTGCTAA+GGG | 0.534995 | 1_3:+60082484 | Msa0130010:CDS |
| AAGTGTAATAGATGATGCTC+CGG | 0.536699 | 1_3:-60082189 | None:intergenic |
| TGAAGGATATGCTTTAGTAT+GGG | 0.539880 | 1_3:+60081796 | Msa0130010:CDS |
| TTTGAAGTTGTTGCAGAACA+AGG | 0.541485 | 1_3:+60082070 | Msa0130010:CDS |
| AGAAGAGTTCACATGGCTGC+TGG | 0.542293 | 1_3:+60081062 | None:intergenic |
| AGGAACAAGAGTTGAAAGAA+TGG | 0.543642 | 1_3:+60081243 | Msa0130010:CDS |
| TGTTTATGCTTGGGCACGAA+CGG | 0.545048 | 1_3:-60082681 | None:intergenic |
| ATACAAGGTTGGTAAAGAGC+TGG | 0.545349 | 1_3:+60081373 | Msa0130010:CDS |
| AGAAACTGTGTGGTTGGAAG+AGG | 0.550252 | 1_3:+60081670 | Msa0130010:CDS |
| TGAAAGAGAAACTGTGTGGT+TGG | 0.552834 | 1_3:+60081664 | Msa0130010:CDS |
| CTCCATAGCTACTTCTACGA+TGG | 0.553727 | 1_3:-60081516 | None:intergenic |
| CCTTAGCAGCAGTATCAAGA+AGG | 0.557803 | 1_3:-60082483 | None:intergenic |
| CTTGATACTGCTGCTAAGGG+TGG | 0.563509 | 1_3:+60082487 | Msa0130010:CDS |
| GGAACAAGAGTTGAAAGAAT+GGG | 0.566887 | 1_3:+60081244 | Msa0130010:CDS |
| CAAAGGATTGTTGAACAACA+CGG | 0.571106 | 1_3:+60082724 | Msa0130010:CDS |
| CGTGGAGAGCTTGATAGTAT+GGG | 0.571963 | 1_3:+60081955 | Msa0130010:CDS |
| GAACGAAGTTTGTAATTACT+CGG | 0.573688 | 1_3:+60081694 | Msa0130010:CDS |
| GAGAAGAATTATGTTTCCGA+AGG | 0.576105 | 1_3:+60082519 | Msa0130010:CDS |
| GCACTGGTATGACAAATACA+AGG | 0.576910 | 1_3:+60081358 | Msa0130010:CDS |
| CATAGCTACTTCTACGATGG+TGG | 0.579160 | 1_3:-60081513 | None:intergenic |
| AGCTGGAGGAGATCAGAAAG+AGG | 0.581622 | 1_3:+60081390 | Msa0130010:CDS |
| GGAGAAGACCAATGAGAAGA+CGG | 0.585479 | 1_3:+60082132 | Msa0130010:CDS |
| AGAATGGGCGGAGAAGTTGA+AGG | 0.587022 | 1_3:+60081259 | Msa0130010:CDS |
| AATATGAGTACTACCTGAAG+AGG | 0.587990 | 1_3:-60082250 | None:intergenic |
| TTGGAGATACACTTCAAAGA+GGG | 0.590812 | 1_3:+60081858 | Msa0130010:CDS |
| TGTTTATGCTTGGGCATGAA+CGG | 0.591124 | 1_3:-60082648 | None:intergenic |
| ACGAAGAGAGAGTGATTCAA+AGG | 0.593172 | 1_3:+60082707 | Msa0130010:CDS |
| TTGTGGAAGAAGTAAAAGAC+CGG | 0.596672 | 1_3:+60081597 | Msa0130010:CDS |
| CCCCGTAACAGGTCGGTACG+AGG | 0.601365 | 1_3:-60082800 | None:intergenic |
| GAATGAAAGACAGAAAATAT+GGG | 0.601784 | 1_3:+60082423 | Msa0130010:CDS |
| TCAAATATTATTATTCAACA+AGG | 0.603444 | 1_3:+60082604 | Msa0130010:CDS |
| TCGTGATAAAATCAGTGAAG+AGG | 0.605485 | 1_3:+60081318 | Msa0130010:CDS |
| ATTGCTGCTGAGAGTGAACA+AGG | 0.606084 | 1_3:+60082394 | Msa0130010:CDS |
| CTCCACGGACAAGTTTGGAA+CGG | 0.607904 | 1_3:-60081939 | None:intergenic |
| ATTCCTGGTTGAAGAGTATG+CGG | 0.609971 | 1_3:+60081121 | Msa0130010:CDS |
| TGATAAAATCAGTGAAGAGG+AGG | 0.614245 | 1_3:+60081321 | Msa0130010:CDS |
| CGTTGTAAGAGGAGAAGCAC+CGG | 0.615629 | 1_3:+60081478 | Msa0130010:CDS |
| CCATACTATCAAGCTCTCCA+CGG | 0.623558 | 1_3:-60081954 | None:intergenic |
| TCTGGATTGTGAAGTTGTGG+AGG | 0.624746 | 1_3:+60082305 | Msa0130010:CDS |
| GCAGCATAAGAAATAGCGAA+AGG | 0.628361 | 1_3:-60081986 | None:intergenic |
| TGGTATGACAAATACAAGGT+TGG | 0.632368 | 1_3:+60081362 | Msa0130010:CDS |
| CAAGGTTGGTAAAGAGCTGG+AGG | 0.637417 | 1_3:+60081376 | Msa0130010:CDS |
| ATATGAGTACTACCTGAAGA+GGG | 0.637484 | 1_3:-60082249 | None:intergenic |
| ACCCGTTCCAAACTTGTCCG+TGG | 0.640213 | 1_3:+60081937 | Msa0130010:CDS |
| CTTAGCAGCAGTATCAAGAA+GGG | 0.641176 | 1_3:-60082482 | None:intergenic |
| ATTGGAGATACACTTCAAAG+AGG | 0.647272 | 1_3:+60081857 | Msa0130010:CDS |
| ATGGTGGAACAGGAAGGTGC+CGG | 0.647720 | 1_3:-60081497 | None:intergenic |
| TGGCGTTGCAGTCGATGTTG+TGG | 0.648979 | 1_3:+60081082 | Msa0130010:CDS |
| CCTCGTACCGACCTGTTACG+GGG | 0.652833 | 1_3:+60082800 | Msa0130010:CDS |
| CAGACAATAACATCACGAAG+TGG | 0.653809 | 1_3:-60082286 | None:intergenic |
| GCTTGGGCATGAACGGACAA+CGG | 0.655154 | 1_3:-60082641 | None:intergenic |
| TCTACGATGGTGGAACAGGA+AGG | 0.656682 | 1_3:-60081503 | None:intergenic |
| TACATTTCTAGAGATACGGA+GGG | 0.657086 | 1_3:+60082748 | Msa0130010:CDS |
| AAACCGCATACTCTTCAACC+AGG | 0.662234 | 1_3:-60081124 | None:intergenic |
| TTACATTTCTAGAGATACGG+AGG | 0.663495 | 1_3:+60082747 | Msa0130010:CDS |
| AGAAAGAGCTGAGGTCAATG+CGG | 0.667050 | 1_3:+60081180 | Msa0130010:CDS |
| GGGAGTTTAAGAGTCAGATG+AGG | 0.670808 | 1_3:+60081816 | Msa0130010:CDS |
| AGAACAGGTTGAGCAGCGCG+GGG | 0.671879 | 1_3:+60081211 | Msa0130010:CDS |
| GTTTGAGCCCCGTAACAGGT+CGG | 0.678323 | 1_3:-60082807 | None:intergenic |
| GGAAGTCCAATCAATCAGAG+AGG | 0.680392 | 1_3:+60082831 | Msa0130010:CDS |
| AGTCGATGTTGTGGTATCAG+TGG | 0.681138 | 1_3:+60081091 | Msa0130010:CDS |
| ACAAGAGTTGAAAGAATGGG+CGG | 0.683061 | 1_3:+60081247 | Msa0130010:CDS |
| AGAAGACCAATGAGAAGACG+GGG | 0.689516 | 1_3:+60082134 | Msa0130010:CDS |
| AGTGTAACATTACCAAAACA+AGG | 0.695604 | 1_3:+60082101 | Msa0130010:CDS |
| GGTTGAACAACTGAGAATCG+TGG | 0.697701 | 1_3:+60082444 | Msa0130010:CDS |
| AATGGATTGAGAAAGAGCTG+AGG | 0.698893 | 1_3:+60081171 | Msa0130010:CDS |
| CGTAACAGGTCGGTACGAGG+AGG | 0.703920 | 1_3:-60082797 | None:intergenic |
| TTAGAACAGGTTGAGCAGCG+CGG | 0.707331 | 1_3:+60081209 | Msa0130010:CDS |
| AGATTCTTAATCTCTCACAC+AGG | 0.710093 | 1_3:+60082563 | Msa0130010:CDS |
| AAAGAGCTGAGGTCAATGCG+GGG | 0.721739 | 1_3:+60081182 | Msa0130010:CDS |
| TACCTGAAGAGGGAGAAACA+GGG | 0.733264 | 1_3:-60082239 | None:intergenic |
| CAAATGAAAGAGAAACTGTG+TGG | 0.768788 | 1_3:+60081660 | Msa0130010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAATAATGAATTTAAACT+TGG | + | chr1_3:60081430-60081449 | Msa0130010:CDS | 15.0% |
| !! | AAATTTAATAACCAGTAATA+AGG | + | chr1_3:60081565-60081584 | Msa0130010:CDS | 15.0% |
| !! | TTACACTTATATTAATTTAC+CGG | + | chr1_3:60082204-60082223 | Msa0130010:CDS | 15.0% |
| !!! | AATATTTGAAATACCATATA+TGG | - | chr1_3:60082593-60082612 | None:intergenic | 15.0% |
| !! | TCAAATATTATTATTCAACA+AGG | + | chr1_3:60082604-60082623 | Msa0130010:CDS | 15.0% |
| !! | GAAAATAATGAATTTAAACT+TGG | + | chr1_3:60081430-60081449 | Msa0130010:CDS | 15.0% |
| !! | AAATTTAATAACCAGTAATA+AGG | + | chr1_3:60081565-60081584 | Msa0130010:CDS | 15.0% |
| !! | TTACACTTATATTAATTTAC+CGG | + | chr1_3:60082204-60082223 | Msa0130010:CDS | 15.0% |
| !!! | AATATTTGAAATACCATATA+TGG | - | chr1_3:60082593-60082612 | None:intergenic | 15.0% |
| !! | TCAAATATTATTATTCAACA+AGG | + | chr1_3:60082604-60082623 | Msa0130010:CDS | 15.0% |
| !!! | ATTTAGACACAATTTTTTGC+AGG | - | chr1_3:60081631-60081650 | None:intergenic | 25.0% |
| ! | GAAAAATGGTTCAAAATGTA+TGG | + | chr1_3:60081749-60081768 | Msa0130010:CDS | 25.0% |
| ! | CATATCCTTCATAAAGATAA+AGG | - | chr1_3:60081787-60081806 | None:intergenic | 25.0% |
| ! | TATATTAGGAGTTGTGAAAT+TGG | + | chr1_3:60081839-60081858 | Msa0130010:CDS | 25.0% |
| ! | CATTAAAGCTAAATCTCTTT+GGG | - | chr1_3:60082356-60082375 | None:intergenic | 25.0% |
| ! | TTTAATGCATGCATTTCTTA+GGG | + | chr1_3:60082369-60082388 | Msa0130010:CDS | 25.0% |
| ! | TGAATGAAAGACAGAAAATA+TGG | + | chr1_3:60082422-60082441 | Msa0130010:CDS | 25.0% |
| ! | GAATGAAAGACAGAAAATAT+GGG | + | chr1_3:60082423-60082442 | Msa0130010:CDS | 25.0% |
| !!! | ATTTAGACACAATTTTTTGC+AGG | - | chr1_3:60081631-60081650 | None:intergenic | 25.0% |
| ! | GAAAAATGGTTCAAAATGTA+TGG | + | chr1_3:60081749-60081768 | Msa0130010:CDS | 25.0% |
| ! | CATATCCTTCATAAAGATAA+AGG | - | chr1_3:60081787-60081806 | None:intergenic | 25.0% |
| ! | TATATTAGGAGTTGTGAAAT+TGG | + | chr1_3:60081839-60081858 | Msa0130010:CDS | 25.0% |
| ! | CATTAAAGCTAAATCTCTTT+GGG | - | chr1_3:60082356-60082375 | None:intergenic | 25.0% |
| ! | TTTAATGCATGCATTTCTTA+GGG | + | chr1_3:60082369-60082388 | Msa0130010:CDS | 25.0% |
| ! | TGAATGAAAGACAGAAAATA+TGG | + | chr1_3:60082422-60082441 | Msa0130010:CDS | 25.0% |
| ! | GAATGAAAGACAGAAAATAT+GGG | + | chr1_3:60082423-60082442 | Msa0130010:CDS | 25.0% |
| AATCTCAATCACCTTATTAC+TGG | - | chr1_3:60081579-60081598 | None:intergenic | 30.0% | |
| TAATAAGGTGATTGAGATTG+TGG | + | chr1_3:60081580-60081599 | Msa0130010:CDS | 30.0% | |
| GAACGAAGTTTGTAATTACT+CGG | + | chr1_3:60081694-60081713 | Msa0130010:CDS | 30.0% | |
| AATTACTCGGAAAAAGTTGT+TGG | + | chr1_3:60081707-60081726 | Msa0130010:CDS | 30.0% | |
| TCATTGCAAGAAGAGAAAAA+TGG | + | chr1_3:60081735-60081754 | Msa0130010:CDS | 30.0% | |
| AATGGTTCAAAATGTATGGT+TGG | + | chr1_3:60081753-60081772 | Msa0130010:CDS | 30.0% | |
| AAGGTCCTTTATCTTTATGA+AGG | + | chr1_3:60081779-60081798 | Msa0130010:CDS | 30.0% | |
| ATGAAGGATATGCTTTAGTA+TGG | + | chr1_3:60081795-60081814 | Msa0130010:CDS | 30.0% | |
| TGAAGGATATGCTTTAGTAT+GGG | + | chr1_3:60081796-60081815 | Msa0130010:CDS | 30.0% | |
| AGTGTAACATTACCAAAACA+AGG | + | chr1_3:60082101-60082120 | Msa0130010:CDS | 30.0% | |
| AAGGAATAGCAATACTAAGA+AGG | + | chr1_3:60082161-60082180 | Msa0130010:CDS | 30.0% | |
| GCATTAAAGCTAAATCTCTT+TGG | - | chr1_3:60082357-60082376 | None:intergenic | 30.0% | |
| CTTTAATGCATGCATTTCTT+AGG | + | chr1_3:60082368-60082387 | Msa0130010:CDS | 30.0% | |
| ! | TTTTCTGTCTTTCATTCATC+AGG | - | chr1_3:60082420-60082439 | None:intergenic | 30.0% |
| AATCTCAATCACCTTATTAC+TGG | - | chr1_3:60081579-60081598 | None:intergenic | 30.0% | |
| TAATAAGGTGATTGAGATTG+TGG | + | chr1_3:60081580-60081599 | Msa0130010:CDS | 30.0% | |
| GAACGAAGTTTGTAATTACT+CGG | + | chr1_3:60081694-60081713 | Msa0130010:CDS | 30.0% | |
| AATTACTCGGAAAAAGTTGT+TGG | + | chr1_3:60081707-60081726 | Msa0130010:CDS | 30.0% | |
| TCATTGCAAGAAGAGAAAAA+TGG | + | chr1_3:60081735-60081754 | Msa0130010:CDS | 30.0% | |
| AATGGTTCAAAATGTATGGT+TGG | + | chr1_3:60081753-60081772 | Msa0130010:CDS | 30.0% | |
| AAGGTCCTTTATCTTTATGA+AGG | + | chr1_3:60081779-60081798 | Msa0130010:CDS | 30.0% | |
| ATGAAGGATATGCTTTAGTA+TGG | + | chr1_3:60081795-60081814 | Msa0130010:CDS | 30.0% | |
| TGAAGGATATGCTTTAGTAT+GGG | + | chr1_3:60081796-60081815 | Msa0130010:CDS | 30.0% | |
| AGTGTAACATTACCAAAACA+AGG | + | chr1_3:60082101-60082120 | Msa0130010:CDS | 30.0% | |
| AAGGAATAGCAATACTAAGA+AGG | + | chr1_3:60082161-60082180 | Msa0130010:CDS | 30.0% | |
| GCATTAAAGCTAAATCTCTT+TGG | - | chr1_3:60082357-60082376 | None:intergenic | 30.0% | |
| CTTTAATGCATGCATTTCTT+AGG | + | chr1_3:60082368-60082387 | Msa0130010:CDS | 30.0% | |
| ! | TTTTCTGTCTTTCATTCATC+AGG | - | chr1_3:60082420-60082439 | None:intergenic | 30.0% |
| AGGAACAAGAGTTGAAAGAA+TGG | + | chr1_3:60081243-60081262 | Msa0130010:CDS | 35.0% | |
| GGAACAAGAGTTGAAAGAAT+GGG | + | chr1_3:60081244-60081263 | Msa0130010:CDS | 35.0% | |
| TCGTGATAAAATCAGTGAAG+AGG | + | chr1_3:60081318-60081337 | Msa0130010:CDS | 35.0% | |
| TGATAAAATCAGTGAAGAGG+AGG | + | chr1_3:60081321-60081340 | Msa0130010:CDS | 35.0% | |
| TGGTATGACAAATACAAGGT+TGG | + | chr1_3:60081362-60081381 | Msa0130010:CDS | 35.0% | |
| TGGAGAAGCTTGATCAAATT+CGG | + | chr1_3:60081534-60081553 | Msa0130010:CDS | 35.0% | |
| TTGTGGAAGAAGTAAAAGAC+CGG | + | chr1_3:60081597-60081616 | Msa0130010:CDS | 35.0% | |
| CAAATGAAAGAGAAACTGTG+TGG | + | chr1_3:60081660-60081679 | Msa0130010:CDS | 35.0% | |
| CAAAATGTATGGTTGGAAGA+AGG | + | chr1_3:60081760-60081779 | Msa0130010:CDS | 35.0% | |
| AGAGTCAGATGAGGTATATT+AGG | + | chr1_3:60081825-60081844 | Msa0130010:CDS | 35.0% | |
| ATTGGAGATACACTTCAAAG+AGG | + | chr1_3:60081857-60081876 | Msa0130010:CDS | 35.0% | |
| TTGGAGATACACTTCAAAGA+GGG | + | chr1_3:60081858-60081877 | Msa0130010:CDS | 35.0% | |
| ! | TTTGAAGTTGTTGCAGAACA+AGG | + | chr1_3:60082070-60082089 | Msa0130010:CDS | 35.0% |
| AAGTGTAATAGATGATGCTC+CGG | - | chr1_3:60082192-60082211 | None:intergenic | 35.0% | |
| ATATGAGTACTACCTGAAGA+GGG | - | chr1_3:60082252-60082271 | None:intergenic | 35.0% | |
| AATATGAGTACTACCTGAAG+AGG | - | chr1_3:60082253-60082272 | None:intergenic | 35.0% | |
| GAGAAGAATTATGTTTCCGA+AGG | + | chr1_3:60082519-60082538 | Msa0130010:CDS | 35.0% | |
| AAGAAGCAATTGATGTCCTT+CGG | - | chr1_3:60082538-60082557 | None:intergenic | 35.0% | |
| AGATTCTTAATCTCTCACAC+AGG | + | chr1_3:60082563-60082582 | Msa0130010:CDS | 35.0% | |
| !! | CAACAGTGTTGTTTATGCTT+GGG | - | chr1_3:60082660-60082679 | None:intergenic | 35.0% |
| !! | ACAACAGTGTTGTTTATGCT+TGG | - | chr1_3:60082661-60082680 | None:intergenic | 35.0% |
| CAAAGGATTGTTGAACAACA+CGG | + | chr1_3:60082724-60082743 | Msa0130010:CDS | 35.0% | |
| ! | CGGTTACATTTCTAGAGATA+CGG | + | chr1_3:60082744-60082763 | Msa0130010:CDS | 35.0% |
| ! | TTACATTTCTAGAGATACGG+AGG | + | chr1_3:60082747-60082766 | Msa0130010:CDS | 35.0% |
| ! | TACATTTCTAGAGATACGGA+GGG | + | chr1_3:60082748-60082767 | Msa0130010:CDS | 35.0% |
| AGGAACAAGAGTTGAAAGAA+TGG | + | chr1_3:60081243-60081262 | Msa0130010:CDS | 35.0% | |
| GGAACAAGAGTTGAAAGAAT+GGG | + | chr1_3:60081244-60081263 | Msa0130010:CDS | 35.0% | |
| TCGTGATAAAATCAGTGAAG+AGG | + | chr1_3:60081318-60081337 | Msa0130010:CDS | 35.0% | |
| TGATAAAATCAGTGAAGAGG+AGG | + | chr1_3:60081321-60081340 | Msa0130010:CDS | 35.0% | |
| TGGTATGACAAATACAAGGT+TGG | + | chr1_3:60081362-60081381 | Msa0130010:CDS | 35.0% | |
| TGGAGAAGCTTGATCAAATT+CGG | + | chr1_3:60081534-60081553 | Msa0130010:CDS | 35.0% | |
| TTGTGGAAGAAGTAAAAGAC+CGG | + | chr1_3:60081597-60081616 | Msa0130010:CDS | 35.0% | |
| CAAATGAAAGAGAAACTGTG+TGG | + | chr1_3:60081660-60081679 | Msa0130010:CDS | 35.0% | |
| CAAAATGTATGGTTGGAAGA+AGG | + | chr1_3:60081760-60081779 | Msa0130010:CDS | 35.0% | |
| AGAGTCAGATGAGGTATATT+AGG | + | chr1_3:60081825-60081844 | Msa0130010:CDS | 35.0% | |
| ATTGGAGATACACTTCAAAG+AGG | + | chr1_3:60081857-60081876 | Msa0130010:CDS | 35.0% | |
| TTGGAGATACACTTCAAAGA+GGG | + | chr1_3:60081858-60081877 | Msa0130010:CDS | 35.0% | |
| ! | TTTGAAGTTGTTGCAGAACA+AGG | + | chr1_3:60082070-60082089 | Msa0130010:CDS | 35.0% |
| AAGTGTAATAGATGATGCTC+CGG | - | chr1_3:60082192-60082211 | None:intergenic | 35.0% | |
| ATATGAGTACTACCTGAAGA+GGG | - | chr1_3:60082252-60082271 | None:intergenic | 35.0% | |
| AATATGAGTACTACCTGAAG+AGG | - | chr1_3:60082253-60082272 | None:intergenic | 35.0% | |
| GAGAAGAATTATGTTTCCGA+AGG | + | chr1_3:60082519-60082538 | Msa0130010:CDS | 35.0% | |
| AAGAAGCAATTGATGTCCTT+CGG | - | chr1_3:60082538-60082557 | None:intergenic | 35.0% | |
| AGATTCTTAATCTCTCACAC+AGG | + | chr1_3:60082563-60082582 | Msa0130010:CDS | 35.0% | |
| !! | CAACAGTGTTGTTTATGCTT+GGG | - | chr1_3:60082660-60082679 | None:intergenic | 35.0% |
| !! | ACAACAGTGTTGTTTATGCT+TGG | - | chr1_3:60082661-60082680 | None:intergenic | 35.0% |
| CAAAGGATTGTTGAACAACA+CGG | + | chr1_3:60082724-60082743 | Msa0130010:CDS | 35.0% | |
| ! | CGGTTACATTTCTAGAGATA+CGG | + | chr1_3:60082744-60082763 | Msa0130010:CDS | 35.0% |
| ! | TTACATTTCTAGAGATACGG+AGG | + | chr1_3:60082747-60082766 | Msa0130010:CDS | 35.0% |
| ! | TACATTTCTAGAGATACGGA+GGG | + | chr1_3:60082748-60082767 | Msa0130010:CDS | 35.0% |
| ATCAGTGGTTGCAAAATTCC+TGG | + | chr1_3:60081106-60081125 | Msa0130010:CDS | 40.0% | |
| ! | ATTCCTGGTTGAAGAGTATG+CGG | + | chr1_3:60081121-60081140 | Msa0130010:CDS | 40.0% |
| !! | GTTGAAGAGTATGCGGTTTT+GGG | + | chr1_3:60081128-60081147 | Msa0130010:CDS | 40.0% |
| !! | TTGAAGAGTATGCGGTTTTG+GGG | + | chr1_3:60081129-60081148 | Msa0130010:CDS | 40.0% |
| !! | AATGGATTGAGAAAGAGCTG+AGG | + | chr1_3:60081171-60081190 | Msa0130010:CDS | 40.0% |
| ACAAGAGTTGAAAGAATGGG+CGG | + | chr1_3:60081247-60081266 | Msa0130010:CDS | 40.0% | |
| TAAAATCAGTGAAGAGGAGG+AGG | + | chr1_3:60081324-60081343 | Msa0130010:CDS | 40.0% | |
| ! | GCACTGGTATGACAAATACA+AGG | + | chr1_3:60081358-60081377 | Msa0130010:CDS | 40.0% |
| !! | ATACAAGGTTGGTAAAGAGC+TGG | + | chr1_3:60081373-60081392 | Msa0130010:CDS | 40.0% |
| !!! | TTTTTTGCAGGTCTTTGAGC+CGG | - | chr1_3:60081619-60081638 | None:intergenic | 40.0% |
| TGAAAGAGAAACTGTGTGGT+TGG | + | chr1_3:60081664-60081683 | Msa0130010:CDS | 40.0% | |
| CTTCAAAGAGGGATGACTTA+CGG | + | chr1_3:60081869-60081888 | Msa0130010:CDS | 40.0% | |
| GCAGCATAAGAAATAGCGAA+AGG | - | chr1_3:60081989-60082008 | None:intergenic | 40.0% | |
| ! | TTTTCTGTTCCTGATGACCA+AGG | + | chr1_3:60082013-60082032 | Msa0130010:CDS | 40.0% |
| CATACAAGAAGTTCCATCCT+TGG | - | chr1_3:60082033-60082052 | None:intergenic | 40.0% | |
| TACCAAAACAAGGCGTAAAC+TGG | + | chr1_3:60082111-60082130 | Msa0130010:CDS | 40.0% | |
| CAATACTAAGAAGGCTGATC+CGG | + | chr1_3:60082170-60082189 | Msa0130010:CDS | 40.0% | |
| CACGAAGTGGAAAACACAAT+TGG | - | chr1_3:60082276-60082295 | None:intergenic | 40.0% | |
| CAGACAATAACATCACGAAG+TGG | - | chr1_3:60082289-60082308 | None:intergenic | 40.0% | |
| CACTTCGTGATGTTATTGTC+TGG | + | chr1_3:60082287-60082306 | Msa0130010:CDS | 40.0% | |
| TTGTCTGGATTGTGAAGTTG+TGG | + | chr1_3:60082302-60082321 | Msa0130010:CDS | 40.0% | |
| CTTAGCAGCAGTATCAAGAA+GGG | - | chr1_3:60082485-60082504 | None:intergenic | 40.0% | |
| CTTCTTGATACTGCTGCTAA+GGG | + | chr1_3:60082484-60082503 | Msa0130010:CDS | 40.0% | |
| GAAGGACATCAATTGCTTCT+TGG | + | chr1_3:60082537-60082556 | Msa0130010:CDS | 40.0% | |
| TCACACAGGAAGACCATATA+TGG | + | chr1_3:60082577-60082596 | Msa0130010:CDS | 40.0% | |
| TGTTTATGCTTGGGCATGAA+CGG | - | chr1_3:60082651-60082670 | None:intergenic | 40.0% | |
| CTTCGTGCATGTTTATGCTT+GGG | - | chr1_3:60082693-60082712 | None:intergenic | 40.0% | |
| TCTTCGTGCATGTTTATGCT+TGG | - | chr1_3:60082694-60082713 | None:intergenic | 40.0% | |
| ACGAAGAGAGAGTGATTCAA+AGG | + | chr1_3:60082707-60082726 | Msa0130010:CDS | 40.0% | |
| ATCAGTGGTTGCAAAATTCC+TGG | + | chr1_3:60081106-60081125 | Msa0130010:CDS | 40.0% | |
| ! | ATTCCTGGTTGAAGAGTATG+CGG | + | chr1_3:60081121-60081140 | Msa0130010:CDS | 40.0% |
| !! | GTTGAAGAGTATGCGGTTTT+GGG | + | chr1_3:60081128-60081147 | Msa0130010:CDS | 40.0% |
| !! | TTGAAGAGTATGCGGTTTTG+GGG | + | chr1_3:60081129-60081148 | Msa0130010:CDS | 40.0% |
| !! | AATGGATTGAGAAAGAGCTG+AGG | + | chr1_3:60081171-60081190 | Msa0130010:CDS | 40.0% |
| ACAAGAGTTGAAAGAATGGG+CGG | + | chr1_3:60081247-60081266 | Msa0130010:CDS | 40.0% | |
| TAAAATCAGTGAAGAGGAGG+AGG | + | chr1_3:60081324-60081343 | Msa0130010:CDS | 40.0% | |
| ! | GCACTGGTATGACAAATACA+AGG | + | chr1_3:60081358-60081377 | Msa0130010:CDS | 40.0% |
| !! | ATACAAGGTTGGTAAAGAGC+TGG | + | chr1_3:60081373-60081392 | Msa0130010:CDS | 40.0% |
| !!! | TTTTTTGCAGGTCTTTGAGC+CGG | - | chr1_3:60081619-60081638 | None:intergenic | 40.0% |
| TGAAAGAGAAACTGTGTGGT+TGG | + | chr1_3:60081664-60081683 | Msa0130010:CDS | 40.0% | |
| CTTCAAAGAGGGATGACTTA+CGG | + | chr1_3:60081869-60081888 | Msa0130010:CDS | 40.0% | |
| GCAGCATAAGAAATAGCGAA+AGG | - | chr1_3:60081989-60082008 | None:intergenic | 40.0% | |
| ! | TTTTCTGTTCCTGATGACCA+AGG | + | chr1_3:60082013-60082032 | Msa0130010:CDS | 40.0% |
| CATACAAGAAGTTCCATCCT+TGG | - | chr1_3:60082033-60082052 | None:intergenic | 40.0% | |
| TACCAAAACAAGGCGTAAAC+TGG | + | chr1_3:60082111-60082130 | Msa0130010:CDS | 40.0% | |
| CAATACTAAGAAGGCTGATC+CGG | + | chr1_3:60082170-60082189 | Msa0130010:CDS | 40.0% | |
| CACGAAGTGGAAAACACAAT+TGG | - | chr1_3:60082276-60082295 | None:intergenic | 40.0% | |
| CAGACAATAACATCACGAAG+TGG | - | chr1_3:60082289-60082308 | None:intergenic | 40.0% | |
| CACTTCGTGATGTTATTGTC+TGG | + | chr1_3:60082287-60082306 | Msa0130010:CDS | 40.0% | |
| TTGTCTGGATTGTGAAGTTG+TGG | + | chr1_3:60082302-60082321 | Msa0130010:CDS | 40.0% | |
| CTTAGCAGCAGTATCAAGAA+GGG | - | chr1_3:60082485-60082504 | None:intergenic | 40.0% | |
| CTTCTTGATACTGCTGCTAA+GGG | + | chr1_3:60082484-60082503 | Msa0130010:CDS | 40.0% | |
| GAAGGACATCAATTGCTTCT+TGG | + | chr1_3:60082537-60082556 | Msa0130010:CDS | 40.0% | |
| TCACACAGGAAGACCATATA+TGG | + | chr1_3:60082577-60082596 | Msa0130010:CDS | 40.0% | |
| TGTTTATGCTTGGGCATGAA+CGG | - | chr1_3:60082651-60082670 | None:intergenic | 40.0% | |
| CTTCGTGCATGTTTATGCTT+GGG | - | chr1_3:60082693-60082712 | None:intergenic | 40.0% | |
| TCTTCGTGCATGTTTATGCT+TGG | - | chr1_3:60082694-60082713 | None:intergenic | 40.0% | |
| ACGAAGAGAGAGTGATTCAA+AGG | + | chr1_3:60082707-60082726 | Msa0130010:CDS | 40.0% | |
| AGTCGATGTTGTGGTATCAG+TGG | + | chr1_3:60081091-60081110 | Msa0130010:CDS | 45.0% | |
| AAACCGCATACTCTTCAACC+AGG | - | chr1_3:60081127-60081146 | None:intergenic | 45.0% | |
| !! | GGTTGAAGAGTATGCGGTTT+TGG | + | chr1_3:60081127-60081146 | Msa0130010:CDS | 45.0% |
| !! | TGAAGAGTATGCGGTTTTGG+GGG | + | chr1_3:60081130-60081149 | Msa0130010:CDS | 45.0% |
| AGAAAGAGCTGAGGTCAATG+CGG | + | chr1_3:60081180-60081199 | Msa0130010:CDS | 45.0% | |
| AATGCGGGGATTGTTAGAAC+AGG | + | chr1_3:60081196-60081215 | Msa0130010:CDS | 45.0% | |
| GTTGAAACTCCCGTTGTAAG+AGG | + | chr1_3:60081467-60081486 | Msa0130010:CDS | 45.0% | |
| !! | TACTTCTACGATGGTGGAAC+AGG | - | chr1_3:60081510-60081529 | None:intergenic | 45.0% |
| CATAGCTACTTCTACGATGG+TGG | - | chr1_3:60081516-60081535 | None:intergenic | 45.0% | |
| CACCATCGTAGAAGTAGCTA+TGG | + | chr1_3:60081514-60081533 | Msa0130010:CDS | 45.0% | |
| CTCCATAGCTACTTCTACGA+TGG | - | chr1_3:60081519-60081538 | None:intergenic | 45.0% | |
| AGAAACTGTGTGGTTGGAAG+AGG | + | chr1_3:60081670-60081689 | Msa0130010:CDS | 45.0% | |
| GGGAGTTTAAGAGTCAGATG+AGG | + | chr1_3:60081816-60081835 | Msa0130010:CDS | 45.0% | |
| CCATACTATCAAGCTCTCCA+CGG | - | chr1_3:60081957-60081976 | None:intergenic | 45.0% | |
| ! | CGTGGAGAGCTTGATAGTAT+GGG | + | chr1_3:60081955-60081974 | Msa0130010:CDS | 45.0% |
| AAGTTCCATCCTTGGTCATC+AGG | - | chr1_3:60082025-60082044 | None:intergenic | 45.0% | |
| !!! | CTCCAGTTTACGCCTTGTTT+TGG | - | chr1_3:60082116-60082135 | None:intergenic | 45.0% |
| GGAGAAGACCAATGAGAAGA+CGG | + | chr1_3:60082132-60082151 | Msa0130010:CDS | 45.0% | |
| GAGAAGACCAATGAGAAGAC+GGG | + | chr1_3:60082133-60082152 | Msa0130010:CDS | 45.0% | |
| AGAAGACCAATGAGAAGACG+GGG | + | chr1_3:60082134-60082153 | Msa0130010:CDS | 45.0% | |
| ! | TTTTCTCCCCGTCTTCTCAT+TGG | - | chr1_3:60082143-60082162 | None:intergenic | 45.0% |
| AATGAGAAGACGGGGAGAAA+AGG | + | chr1_3:60082142-60082161 | Msa0130010:CDS | 45.0% | |
| AACAGGGACAGTATGAGAAC+CGG | - | chr1_3:60082226-60082245 | None:intergenic | 45.0% | |
| TACCTGAAGAGGGAGAAACA+GGG | - | chr1_3:60082242-60082261 | None:intergenic | 45.0% | |
| TCTGGATTGTGAAGTTGTGG+AGG | + | chr1_3:60082305-60082324 | Msa0130010:CDS | 45.0% | |
| TGTGAAGTTGTGGAGGTCTA+TGG | + | chr1_3:60082312-60082331 | Msa0130010:CDS | 45.0% | |
| ATTGCTGCTGAGAGTGAACA+AGG | + | chr1_3:60082394-60082413 | Msa0130010:CDS | 45.0% | |
| GGTTGAACAACTGAGAATCG+TGG | + | chr1_3:60082444-60082463 | Msa0130010:CDS | 45.0% | |
| CTGAGAATCGTGGCTCAAAA+TGG | + | chr1_3:60082454-60082473 | Msa0130010:CDS | 45.0% | |
| CCTTAGCAGCAGTATCAAGA+AGG | - | chr1_3:60082486-60082505 | None:intergenic | 45.0% | |
| CCTTCTTGATACTGCTGCTA+AGG | + | chr1_3:60082483-60082502 | Msa0130010:CDS | 45.0% | |
| TGTTTATGCTTGGGCACGAA+CGG | - | chr1_3:60082684-60082703 | None:intergenic | 45.0% | |
| GGAAGTCCAATCAATCAGAG+AGG | + | chr1_3:60082831-60082850 | Msa0130010:CDS | 45.0% | |
| CCTCTTCCTCTCTGATTGAT+TGG | - | chr1_3:60082840-60082859 | None:intergenic | 45.0% | |
| CCAATCAATCAGAGAGGAAG+AGG | + | chr1_3:60082837-60082856 | Msa0130010:CDS | 45.0% | |
| AGTCGATGTTGTGGTATCAG+TGG | + | chr1_3:60081091-60081110 | Msa0130010:CDS | 45.0% | |
| AAACCGCATACTCTTCAACC+AGG | - | chr1_3:60081127-60081146 | None:intergenic | 45.0% | |
| !! | GGTTGAAGAGTATGCGGTTT+TGG | + | chr1_3:60081127-60081146 | Msa0130010:CDS | 45.0% |
| !! | TGAAGAGTATGCGGTTTTGG+GGG | + | chr1_3:60081130-60081149 | Msa0130010:CDS | 45.0% |
| AGAAAGAGCTGAGGTCAATG+CGG | + | chr1_3:60081180-60081199 | Msa0130010:CDS | 45.0% | |
| AATGCGGGGATTGTTAGAAC+AGG | + | chr1_3:60081196-60081215 | Msa0130010:CDS | 45.0% | |
| GTTGAAACTCCCGTTGTAAG+AGG | + | chr1_3:60081467-60081486 | Msa0130010:CDS | 45.0% | |
| !! | TACTTCTACGATGGTGGAAC+AGG | - | chr1_3:60081510-60081529 | None:intergenic | 45.0% |
| CATAGCTACTTCTACGATGG+TGG | - | chr1_3:60081516-60081535 | None:intergenic | 45.0% | |
| CACCATCGTAGAAGTAGCTA+TGG | + | chr1_3:60081514-60081533 | Msa0130010:CDS | 45.0% | |
| CTCCATAGCTACTTCTACGA+TGG | - | chr1_3:60081519-60081538 | None:intergenic | 45.0% | |
| AGAAACTGTGTGGTTGGAAG+AGG | + | chr1_3:60081670-60081689 | Msa0130010:CDS | 45.0% | |
| GGGAGTTTAAGAGTCAGATG+AGG | + | chr1_3:60081816-60081835 | Msa0130010:CDS | 45.0% | |
| CCATACTATCAAGCTCTCCA+CGG | - | chr1_3:60081957-60081976 | None:intergenic | 45.0% | |
| ! | CGTGGAGAGCTTGATAGTAT+GGG | + | chr1_3:60081955-60081974 | Msa0130010:CDS | 45.0% |
| AAGTTCCATCCTTGGTCATC+AGG | - | chr1_3:60082025-60082044 | None:intergenic | 45.0% | |
| !!! | CTCCAGTTTACGCCTTGTTT+TGG | - | chr1_3:60082116-60082135 | None:intergenic | 45.0% |
| GGAGAAGACCAATGAGAAGA+CGG | + | chr1_3:60082132-60082151 | Msa0130010:CDS | 45.0% | |
| GAGAAGACCAATGAGAAGAC+GGG | + | chr1_3:60082133-60082152 | Msa0130010:CDS | 45.0% | |
| AGAAGACCAATGAGAAGACG+GGG | + | chr1_3:60082134-60082153 | Msa0130010:CDS | 45.0% | |
| ! | TTTTCTCCCCGTCTTCTCAT+TGG | - | chr1_3:60082143-60082162 | None:intergenic | 45.0% |
| AATGAGAAGACGGGGAGAAA+AGG | + | chr1_3:60082142-60082161 | Msa0130010:CDS | 45.0% | |
| AACAGGGACAGTATGAGAAC+CGG | - | chr1_3:60082226-60082245 | None:intergenic | 45.0% | |
| TACCTGAAGAGGGAGAAACA+GGG | - | chr1_3:60082242-60082261 | None:intergenic | 45.0% | |
| TCTGGATTGTGAAGTTGTGG+AGG | + | chr1_3:60082305-60082324 | Msa0130010:CDS | 45.0% | |
| TGTGAAGTTGTGGAGGTCTA+TGG | + | chr1_3:60082312-60082331 | Msa0130010:CDS | 45.0% | |
| ATTGCTGCTGAGAGTGAACA+AGG | + | chr1_3:60082394-60082413 | Msa0130010:CDS | 45.0% | |
| GGTTGAACAACTGAGAATCG+TGG | + | chr1_3:60082444-60082463 | Msa0130010:CDS | 45.0% | |
| CTGAGAATCGTGGCTCAAAA+TGG | + | chr1_3:60082454-60082473 | Msa0130010:CDS | 45.0% | |
| CCTTAGCAGCAGTATCAAGA+AGG | - | chr1_3:60082486-60082505 | None:intergenic | 45.0% | |
| CCTTCTTGATACTGCTGCTA+AGG | + | chr1_3:60082483-60082502 | Msa0130010:CDS | 45.0% | |
| TGTTTATGCTTGGGCACGAA+CGG | - | chr1_3:60082684-60082703 | None:intergenic | 45.0% | |
| GGAAGTCCAATCAATCAGAG+AGG | + | chr1_3:60082831-60082850 | Msa0130010:CDS | 45.0% | |
| CCTCTTCCTCTCTGATTGAT+TGG | - | chr1_3:60082840-60082859 | None:intergenic | 45.0% | |
| CCAATCAATCAGAGAGGAAG+AGG | + | chr1_3:60082837-60082856 | Msa0130010:CDS | 45.0% | |
| ATACAGCGAGGCACGTAGAA+TGG | + | chr1_3:60081153-60081172 | Msa0130010:CDS | 50.0% | |
| GAAAGAGCTGAGGTCAATGC+GGG | + | chr1_3:60081181-60081200 | Msa0130010:CDS | 50.0% | |
| AAAGAGCTGAGGTCAATGCG+GGG | + | chr1_3:60081182-60081201 | Msa0130010:CDS | 50.0% | |
| ! | TTAGAACAGGTTGAGCAGCG+CGG | + | chr1_3:60081209-60081228 | Msa0130010:CDS | 50.0% |
| AGAATGGGCGGAGAAGTTGA+AGG | + | chr1_3:60081259-60081278 | Msa0130010:CDS | 50.0% | |
| AATCAGTGAAGAGGAGGAGG+TGG | + | chr1_3:60081327-60081346 | Msa0130010:CDS | 50.0% | |
| ATCAGTGAAGAGGAGGAGGT+GGG | + | chr1_3:60081328-60081347 | Msa0130010:CDS | 50.0% | |
| !! | CAAGGTTGGTAAAGAGCTGG+AGG | + | chr1_3:60081376-60081395 | Msa0130010:CDS | 50.0% |
| AGCTGGAGGAGATCAGAAAG+AGG | + | chr1_3:60081390-60081409 | Msa0130010:CDS | 50.0% | |
| GGTGCTTCTCCTCTTACAAC+GGG | - | chr1_3:60081479-60081498 | None:intergenic | 50.0% | |
| CGGTGCTTCTCCTCTTACAA+CGG | - | chr1_3:60081480-60081499 | None:intergenic | 50.0% | |
| ! | CGTTGTAAGAGGAGAAGCAC+CGG | + | chr1_3:60081478-60081497 | Msa0130010:CDS | 50.0% |
| !! | TCTACGATGGTGGAACAGGA+AGG | - | chr1_3:60081506-60081525 | None:intergenic | 50.0% |
| AGGGATGACTTACGGAGTTG+TGG | + | chr1_3:60081877-60081896 | Msa0130010:CDS | 50.0% | |
| GGGATGACTTACGGAGTTGT+GGG | + | chr1_3:60081878-60081897 | Msa0130010:CDS | 50.0% | |
| ! | TCCACGGACAAGTTTGGAAC+GGG | - | chr1_3:60081941-60081960 | None:intergenic | 50.0% |
| CTCCACGGACAAGTTTGGAA+CGG | - | chr1_3:60081942-60081961 | None:intergenic | 50.0% | |
| AAGCTCTCCACGGACAAGTT+TGG | - | chr1_3:60081947-60081966 | None:intergenic | 50.0% | |
| ! | CCGTGGAGAGCTTGATAGTA+TGG | + | chr1_3:60081954-60081973 | Msa0130010:CDS | 50.0% |
| CTGTTCCTGATGACCAAGGA+TGG | + | chr1_3:60082017-60082036 | Msa0130010:CDS | 50.0% | |
| CTACCTGAAGAGGGAGAAAC+AGG | - | chr1_3:60082243-60082262 | None:intergenic | 50.0% | |
| CTTGATACTGCTGCTAAGGG+TGG | + | chr1_3:60082487-60082506 | Msa0130010:CDS | 50.0% | |
| ATACAGCGAGGCACGTAGAA+TGG | + | chr1_3:60081153-60081172 | Msa0130010:CDS | 50.0% | |
| GAAAGAGCTGAGGTCAATGC+GGG | + | chr1_3:60081181-60081200 | Msa0130010:CDS | 50.0% | |
| AAAGAGCTGAGGTCAATGCG+GGG | + | chr1_3:60081182-60081201 | Msa0130010:CDS | 50.0% | |
| ! | TTAGAACAGGTTGAGCAGCG+CGG | + | chr1_3:60081209-60081228 | Msa0130010:CDS | 50.0% |
| AGAATGGGCGGAGAAGTTGA+AGG | + | chr1_3:60081259-60081278 | Msa0130010:CDS | 50.0% | |
| AATCAGTGAAGAGGAGGAGG+TGG | + | chr1_3:60081327-60081346 | Msa0130010:CDS | 50.0% | |
| ATCAGTGAAGAGGAGGAGGT+GGG | + | chr1_3:60081328-60081347 | Msa0130010:CDS | 50.0% | |
| !! | CAAGGTTGGTAAAGAGCTGG+AGG | + | chr1_3:60081376-60081395 | Msa0130010:CDS | 50.0% |
| AGCTGGAGGAGATCAGAAAG+AGG | + | chr1_3:60081390-60081409 | Msa0130010:CDS | 50.0% | |
| GGTGCTTCTCCTCTTACAAC+GGG | - | chr1_3:60081479-60081498 | None:intergenic | 50.0% | |
| CGGTGCTTCTCCTCTTACAA+CGG | - | chr1_3:60081480-60081499 | None:intergenic | 50.0% | |
| ! | CGTTGTAAGAGGAGAAGCAC+CGG | + | chr1_3:60081478-60081497 | Msa0130010:CDS | 50.0% |
| !! | TCTACGATGGTGGAACAGGA+AGG | - | chr1_3:60081506-60081525 | None:intergenic | 50.0% |
| AGGGATGACTTACGGAGTTG+TGG | + | chr1_3:60081877-60081896 | Msa0130010:CDS | 50.0% | |
| GGGATGACTTACGGAGTTGT+GGG | + | chr1_3:60081878-60081897 | Msa0130010:CDS | 50.0% | |
| ! | TCCACGGACAAGTTTGGAAC+GGG | - | chr1_3:60081941-60081960 | None:intergenic | 50.0% |
| CTCCACGGACAAGTTTGGAA+CGG | - | chr1_3:60081942-60081961 | None:intergenic | 50.0% | |
| AAGCTCTCCACGGACAAGTT+TGG | - | chr1_3:60081947-60081966 | None:intergenic | 50.0% | |
| ! | CCGTGGAGAGCTTGATAGTA+TGG | + | chr1_3:60081954-60081973 | Msa0130010:CDS | 50.0% |
| CTGTTCCTGATGACCAAGGA+TGG | + | chr1_3:60082017-60082036 | Msa0130010:CDS | 50.0% | |
| CTACCTGAAGAGGGAGAAAC+AGG | - | chr1_3:60082243-60082262 | None:intergenic | 50.0% | |
| CTTGATACTGCTGCTAAGGG+TGG | + | chr1_3:60082487-60082506 | Msa0130010:CDS | 50.0% | |
| TGGCGTTGCAGTCGATGTTG+TGG | + | chr1_3:60081082-60081101 | Msa0130010:CDS | 55.0% | |
| ! | TAGAACAGGTTGAGCAGCGC+GGG | + | chr1_3:60081210-60081229 | Msa0130010:CDS | 55.0% |
| TCAGTGAAGAGGAGGAGGTG+GGG | + | chr1_3:60081329-60081348 | Msa0130010:CDS | 55.0% | |
| ! | ATGGTGGAACAGGAAGGTGC+CGG | - | chr1_3:60081500-60081519 | None:intergenic | 55.0% |
| ACCCGTTCCAAACTTGTCCG+TGG | + | chr1_3:60081937-60081956 | Msa0130010:CDS | 55.0% | |
| ! | GTCCCTGTTTCTCCCTCTTC+AGG | + | chr1_3:60082237-60082256 | Msa0130010:CDS | 55.0% |
| CTGCTGCTAAGGGTGGTTGT+TGG | + | chr1_3:60082494-60082513 | Msa0130010:CDS | 55.0% | |
| CTGCTAAGGGTGGTTGTTGG+AGG | + | chr1_3:60082497-60082516 | Msa0130010:CDS | 55.0% | |
| GCTTGGGCATGAACGGACAA+CGG | - | chr1_3:60082644-60082663 | None:intergenic | 55.0% | |
| ! | CTCCTCGTACCGACCTGTTA+CGG | + | chr1_3:60082798-60082817 | Msa0130010:CDS | 55.0% |
| ! | TCCTCGTACCGACCTGTTAC+GGG | + | chr1_3:60082799-60082818 | Msa0130010:CDS | 55.0% |
| GTTTGAGCCCCGTAACAGGT+CGG | - | chr1_3:60082810-60082829 | None:intergenic | 55.0% | |
| ACCTGTTACGGGGCTCAAAC+AGG | + | chr1_3:60082810-60082829 | Msa0130010:CDS | 55.0% | |
| TCCTGTTTGAGCCCCGTAAC+AGG | - | chr1_3:60082814-60082833 | None:intergenic | 55.0% | |
| TGGCGTTGCAGTCGATGTTG+TGG | + | chr1_3:60081082-60081101 | Msa0130010:CDS | 55.0% | |
| ! | TAGAACAGGTTGAGCAGCGC+GGG | + | chr1_3:60081210-60081229 | Msa0130010:CDS | 55.0% |
| TCAGTGAAGAGGAGGAGGTG+GGG | + | chr1_3:60081329-60081348 | Msa0130010:CDS | 55.0% | |
| ! | ATGGTGGAACAGGAAGGTGC+CGG | - | chr1_3:60081500-60081519 | None:intergenic | 55.0% |
| ACCCGTTCCAAACTTGTCCG+TGG | + | chr1_3:60081937-60081956 | Msa0130010:CDS | 55.0% | |
| ! | GTCCCTGTTTCTCCCTCTTC+AGG | + | chr1_3:60082237-60082256 | Msa0130010:CDS | 55.0% |
| CTGCTGCTAAGGGTGGTTGT+TGG | + | chr1_3:60082494-60082513 | Msa0130010:CDS | 55.0% | |
| CTGCTAAGGGTGGTTGTTGG+AGG | + | chr1_3:60082497-60082516 | Msa0130010:CDS | 55.0% | |
| GCTTGGGCATGAACGGACAA+CGG | - | chr1_3:60082644-60082663 | None:intergenic | 55.0% | |
| ! | CTCCTCGTACCGACCTGTTA+CGG | + | chr1_3:60082798-60082817 | Msa0130010:CDS | 55.0% |
| ! | TCCTCGTACCGACCTGTTAC+GGG | + | chr1_3:60082799-60082818 | Msa0130010:CDS | 55.0% |
| GTTTGAGCCCCGTAACAGGT+CGG | - | chr1_3:60082810-60082829 | None:intergenic | 55.0% | |
| ACCTGTTACGGGGCTCAAAC+AGG | + | chr1_3:60082810-60082829 | Msa0130010:CDS | 55.0% | |
| TCCTGTTTGAGCCCCGTAAC+AGG | - | chr1_3:60082814-60082833 | None:intergenic | 55.0% | |
| !!! | CGGTTTTGGGGGATACAGCG+AGG | + | chr1_3:60081141-60081160 | Msa0130010:CDS | 60.0% |
| ! | AGAACAGGTTGAGCAGCGCG+GGG | + | chr1_3:60081211-60081230 | Msa0130010:CDS | 60.0% |
| ! | GGAGGTGGGGAGTTTTGCAC+TGG | + | chr1_3:60081342-60081361 | Msa0130010:CDS | 60.0% |
| !! | GAAGCTGCTGGTTCTGGTGC+TGG | - | chr1_3:60082778-60082797 | None:intergenic | 60.0% |
| !! | GAGGAGGAAGCTGCTGGTTC+TGG | - | chr1_3:60082784-60082803 | None:intergenic | 60.0% |
| CGTAACAGGTCGGTACGAGG+AGG | - | chr1_3:60082800-60082819 | None:intergenic | 60.0% | |
| ! | CCTCGTACCGACCTGTTACG+GGG | + | chr1_3:60082800-60082819 | Msa0130010:CDS | 60.0% |
| !!! | CGGTTTTGGGGGATACAGCG+AGG | + | chr1_3:60081141-60081160 | Msa0130010:CDS | 60.0% |
| ! | AGAACAGGTTGAGCAGCGCG+GGG | + | chr1_3:60081211-60081230 | Msa0130010:CDS | 60.0% |
| ! | GGAGGTGGGGAGTTTTGCAC+TGG | + | chr1_3:60081342-60081361 | Msa0130010:CDS | 60.0% |
| !! | GAAGCTGCTGGTTCTGGTGC+TGG | - | chr1_3:60082778-60082797 | None:intergenic | 60.0% |
| !! | GAGGAGGAAGCTGCTGGTTC+TGG | - | chr1_3:60082784-60082803 | None:intergenic | 60.0% |
| CGTAACAGGTCGGTACGAGG+AGG | - | chr1_3:60082800-60082819 | None:intergenic | 60.0% | |
| ! | CCTCGTACCGACCTGTTACG+GGG | + | chr1_3:60082800-60082819 | Msa0130010:CDS | 60.0% |
| CGGTACGAGGAGGAAGCTGC+TGG | - | chr1_3:60082790-60082809 | None:intergenic | 65.0% | |
| CCCCGTAACAGGTCGGTACG+AGG | - | chr1_3:60082803-60082822 | None:intergenic | 65.0% | |
| CGGTACGAGGAGGAAGCTGC+TGG | - | chr1_3:60082790-60082809 | None:intergenic | 65.0% | |
| CCCCGTAACAGGTCGGTACG+AGG | - | chr1_3:60082803-60082822 | None:intergenic | 65.0% | |
| ! | CAGGTTGAGCAGCGCGGGGA+TGG | + | chr1_3:60081215-60081234 | Msa0130010:CDS | 70.0% |
| GCAGCGCGGGGATGGAGAAC+AGG | + | chr1_3:60081223-60081242 | Msa0130010:CDS | 70.0% | |
| ! | CAGGTTGAGCAGCGCGGGGA+TGG | + | chr1_3:60081215-60081234 | Msa0130010:CDS | 70.0% |
| GCAGCGCGGGGATGGAGAAC+AGG | + | chr1_3:60081223-60081242 | Msa0130010:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 60081074 | 60082891 | 60081074 | ID=Msa0130010;Name=Msa0130010 |
| chr1_3 | mRNA | 60081074 | 60082891 | 60081074 | ID=Msa0130010-mRNA-1;Parent=Msa0130010;Name=Msa0130010-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|-1|0|1|-1|1|1|0|605 |
| chr1_3 | exon | 60081074 | 60082891 | 60081074 | ID=Msa0130010-mRNA-1:exon:19759;Parent=Msa0130010-mRNA-1 |
| chr1_3 | CDS | 60081074 | 60082891 | 60081074 | ID=Msa0130010-mRNA-1:cds;Parent=Msa0130010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
