AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0362780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0362780 MtrunA17_Chr3g0101871 48.043 920 458 8 152 1056 186 1100 0.0 866
Msa0362780 MtrunA17_Chr7g0269651 49.146 761 376 6 152 905 234 990 0.0 783
Msa0362780 MtrunA17_Chr1g0173671 45.251 537 292 2 152 687 224 759 1.42e-164 513
Msa0362780 MtrunA17_Chr7g0270391 52.513 398 184 2 607 999 1 398 8.88e-149 459
Msa0362780 MtrunA17_Chr1g0206501 47.872 470 232 5 850 1309 1 467 1.93e-141 442
Msa0362780 MtrunA17_Chr3g0093501 64.413 281 88 1 529 809 1 269 1.44e-127 395
Msa0362780 MtrunA17_Chr1g0206491 45.455 429 232 2 152 579 150 577 7.58e-124 398
Msa0362780 MtrunA17_Chr1g0173681 50.742 337 156 3 711 1037 2 338 7.36e-106 339
Msa0362780 MtrunA17_Chr3g0101861 54.936 233 99 2 1083 1315 1 227 1.28e-78 268
Msa0362780 MtrunA17_Chr7g0269661 43.421 228 122 1 939 1159 1 228 1.07e-53 187
Msa0362780 MtrunA17_Chr2g0304011 45.506 178 42 3 28 150 1 178 8.20e-41 149
Msa0362780 MtrunA17_Chr5g0400991 42.105 171 98 1 341 511 4 173 1.36e-40 148
Msa0362780 MtrunA17_Chr7g0272521 52.795 161 21 2 19 124 375 535 3.37e-39 154
Msa0362780 MtrunA17_Chr7g0269671 53.125 128 60 0 1182 1309 1 128 3.00e-37 144
Msa0362780 MtrunA17_Chr1g0173691 47.761 134 69 1 1182 1315 1 133 4.28e-32 129
Msa0362780 MtrunA17_Chr2g0279831 80.597 67 13 0 19 85 84 150 8.74e-31 119
Msa0362780 MtrunA17_Chr2g0313151 41.026 156 33 3 42 142 1 152 2.32e-25 103
Msa0362780 MtrunA17_Chr4g0020021 48.780 82 42 0 17 98 59 140 8.68e-23 96.7
Msa0362780 MtrunA17_Chr1g0210941 61.429 70 5 1 102 149 25 94 3.17e-17 78.2
Msa0362780 MtrunA17_Chr2g0308591 60.317 63 23 1 1161 1223 43 103 1.94e-16 76.3
Msa0362780 MtrunA17_Chr3g0082231 48.485 66 34 0 22 87 66 131 6.24e-16 77.8
Msa0362780 MtrunA17_Chr8g0389991 38.462 91 47 2 10 98 97 180 2.32e-15 76.6
Msa0362780 MtrunA17_Chr6g0451401 52.308 65 30 1 19 82 336 400 6.58e-14 76.3
Msa0362780 MtrunA17_Chr4g0002111 42.045 88 47 1 22 109 448 531 6.84e-14 76.6
Msa0362780 MtrunA17_Chr4g0021841 38.202 89 55 0 1019 1107 2 90 1.37e-13 67.8
Msa0362780 MtrunA17_Chr3g0136941 49.123 57 29 0 31 87 56 112 7.23e-13 67.0
Msa0362780 MtrunA17_Chr1g0150421 42.029 69 40 0 19 87 61 129 2.89e-12 65.9
Msa0362780 MtrunA17_Chr3g0091871 41.558 77 37 2 10 85 82 151 6.43e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 291 sgRNAs with CRISPR-Local

Find 475 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGAATTTCTAACCAATT+TGG 0.120386 3_1:+54538291 None:intergenic
TATATGATCGTATATGTTTA+AGG 0.124946 3_1:+54539449 None:intergenic
TATATACAACTGAGAAAATT+TGG 0.136286 3_1:+54539288 None:intergenic
AAGCTCCAATGATCAATAAA+TGG 0.199357 3_1:-54536188 Msa0362780:CDS
ATTAATAAACCTGGATTATA+AGG 0.203973 3_1:+54537682 None:intergenic
TTCCTTTGAGCACATGTTAT+TGG 0.206597 3_1:-54538698 Msa0362780:CDS
TGTATTGTCAATGCTGTTAA+TGG 0.219157 3_1:-54536483 Msa0362780:CDS
CAATGACATGTAACCCAAAT+TGG 0.220603 3_1:-54538305 Msa0362780:CDS
TATGAAGAAGGACACTAAAT+TGG 0.231403 3_1:-54537722 Msa0362780:CDS
GTATTGCCAGCTTCATTTAT+TGG 0.239693 3_1:-54538408 Msa0362780:CDS
TGTTCTGTCCAATGCTTCTA+AGG 0.255235 3_1:+54536164 None:intergenic
ATGTAATTGGCATGAGTTTC+AGG 0.257653 3_1:+54538777 None:intergenic
ATATACAGACGCAGAGATTC+AGG 0.258753 3_1:-54537754 Msa0362780:CDS
GTACTGGTAAAACTTATTTA+TGG 0.262755 3_1:-54536422 Msa0362780:CDS
AACTTAGGTGATGGAAAATT+AGG 0.265666 3_1:-54535877 Msa0362780:CDS
CCAACCGTTTGTCACATTTC+AGG 0.266479 3_1:-54539243 Msa0362780:intron
TTTGAATGGGAAAACATTAA+AGG 0.267771 3_1:-54536661 Msa0362780:CDS
TAGGTTCTGGATTTCATTCT+AGG 0.273570 3_1:-54536991 Msa0362780:CDS
AAAGAACAAGTCTGATCATT+TGG 0.281423 3_1:-54536215 Msa0362780:CDS
GGCTCATGTGCGGGAAGAAC+AGG 0.285318 3_1:-54541347 Msa0362780:CDS
TCCTTTGAGCACATGTTATT+GGG 0.297069 3_1:-54538697 Msa0362780:CDS
GAATCTCTGCGTCTGTATAT+TGG 0.297632 3_1:+54537757 None:intergenic
CTTCCAGTTTATTCGGATAT+TGG 0.297664 3_1:-54539664 Msa0362780:intron
CGAGAAGCATGTGGTGCATT+AGG 0.302078 3_1:-54537067 Msa0362780:CDS
TACAGTGGGTTTGCTGTTGA+TGG 0.304856 3_1:-54539074 Msa0362780:intron
CGAGTGTCATTTGATGAAAA+AGG 0.305053 3_1:-54537784 Msa0362780:CDS
TATGATGGCTGACTTCAAAA+AGG 0.311350 3_1:-54538190 Msa0362780:CDS
AATGCTGTTAATGGAAAATT+AGG 0.317137 3_1:-54536474 Msa0362780:CDS
AAGCATTGGACAGAACATTA+AGG 0.323470 3_1:-54536158 Msa0362780:CDS
AAAACTCTACATGCAATATC+TGG 0.326003 3_1:+54538231 None:intergenic
TTATTTAAGCATATTAATAA+AGG 0.329540 3_1:-54537601 Msa0362780:CDS
AATACCCTGAGCAGCAGATT+TGG 0.332974 3_1:+54539576 None:intergenic
GATGGGATTATGTATGAAAA+AGG 0.334993 3_1:-54536887 Msa0362780:intron
AATAGTATGGATCAACCTTT+TGG 0.338072 3_1:-54536111 Msa0362780:CDS
GTTGAATTTCTAACCAATTT+GGG 0.340986 3_1:+54538292 None:intergenic
GCCTCAGATGATGTGGAAAA+TGG 0.344199 3_1:-54535931 Msa0362780:CDS
ACCTTTGTTCCTCCTAGATC+TGG 0.350365 3_1:-54537187 Msa0362780:CDS
GTCATTGTCAAGAATAAATC+TGG 0.352153 3_1:+54538321 None:intergenic
CGCGAGCGAGGCCCGTCAAT+TGG 0.357206 3_1:-54537217 Msa0362780:CDS
ATATTGCAAAGGCATGTAAT+TGG 0.357638 3_1:+54538764 None:intergenic
TGGCCATATGTAAGAGATTT+GGG 0.357761 3_1:-54538347 Msa0362780:CDS
GGCGTGGTTATTCACTGCTT+GGG 0.357832 3_1:-54541199 Msa0362780:CDS
CGACTTCCCTTAGGAATAAC+TGG 0.358201 3_1:+54536045 None:intergenic
ATTGCATCTTTGTTATTGCC+TGG 0.358349 3_1:-54536336 Msa0362780:CDS
AGAATTTATTGATGGTGTTA+AGG 0.360681 3_1:-54537026 Msa0362780:CDS
AAGGAACAATGTTTCTTAGT+TGG 0.361455 3_1:-54537339 Msa0362780:CDS
TTGGGCATATATGTTCCTAT+TGG 0.361756 3_1:+54539307 None:intergenic
ATGGCCATATGTAAGAGATT+TGG 0.361879 3_1:-54538348 Msa0362780:CDS
GGCTTCCAAATCTGCTGCTC+AGG 0.363105 3_1:-54539581 Msa0362780:CDS
CTTTGTGTGTATGCCATCTC+TGG 0.368310 3_1:-54536637 Msa0362780:CDS
AACGACAGAAGACGGATGTC+TGG 0.371543 3_1:+54541266 None:intergenic
ATTTGATTGTGCAAATAGTA+TGG 0.379951 3_1:-54536124 Msa0362780:CDS
GAGGTATCAACCTTAGGTTC+TGG 0.380783 3_1:-54537004 Msa0362780:CDS
TTGCATCTTTGTTATTGCCT+GGG 0.383289 3_1:-54536335 Msa0362780:CDS
TTATTCACTGCTTGGGGAGA+TGG 0.383454 3_1:-54541192 Msa0362780:CDS
TCAAACTAACCGAAAATATG+AGG 0.385087 3_1:-54535963 Msa0362780:CDS
TGCGATGGGCATATTTGCTT+GGG 0.387442 3_1:+54535584 None:intergenic
TAGATTTCGTTCAGAAAGTA+AGG 0.388054 3_1:-54536385 Msa0362780:CDS
TTTGCTTGGGATTCTGCTCC+TGG 0.388766 3_1:+54535597 None:intergenic
TGAGCGACCCATTGTATGTT+TGG 0.389808 3_1:-54536934 Msa0362780:CDS
TGTTTACTCACCAGATGAAA+TGG 0.391216 3_1:-54537251 Msa0362780:CDS
AAGGCCCATTTATTGATCAT+TGG 0.393145 3_1:+54536183 None:intergenic
TATCACCTTGTGAGTCTGTT+TGG 0.393277 3_1:-54537495 Msa0362780:CDS
TAAGTTGAATACTGTGAGTT+TGG 0.395798 3_1:-54537974 Msa0362780:CDS
CTATCAACTCATCTCGGTTA+TGG 0.396230 3_1:-54536002 Msa0362780:CDS
TTGCGATGGGCATATTTGCT+TGG 0.399653 3_1:+54535583 None:intergenic
TGTTTGCATTCACATCTCTT+GGG 0.400427 3_1:-54539420 Msa0362780:CDS
AGGCGTGGTTATTCACTGCT+TGG 0.403928 3_1:-54541200 Msa0362780:CDS
ATCAGATTGCCAGGCCGCGC+AGG 0.406204 3_1:-54540885 Msa0362780:CDS
ATGTTTGCATTCACATCTCT+TGG 0.407518 3_1:-54539421 Msa0362780:CDS
GTTGCTGACCATTGTGTTGA+TGG 0.407729 3_1:-54541229 Msa0362780:CDS
TGAAGTTGTGGACAGATCTA+AGG 0.408387 3_1:-54537365 Msa0362780:CDS
AAGATGTCAGGCGCTTTGCC+AGG 0.410903 3_1:-54535397 Msa0362780:CDS
CCAAGTCAAACGACGGTGTT+GGG 0.412644 3_1:-54539384 Msa0362780:CDS
TTGCCAGGAGCGACTTTGCC+AGG 0.415508 3_1:+54535537 None:intergenic
GCAAATATGCCCATCGCAAA+TGG 0.418649 3_1:-54535579 Msa0362780:CDS
TCAGATTGCCAGGCCGCGCA+GGG 0.421587 3_1:-54540884 Msa0362780:CDS
TCAGCTTCTGTGCACTTACT+CGG 0.422367 3_1:-54541373 Msa0362780:CDS
GGTTTCCATTCCATTTCATC+TGG 0.423180 3_1:+54537241 None:intergenic
TGCATAATATTCTTTATGCT+TGG 0.423622 3_1:+54536539 None:intergenic
CCCAACACCGTCGTTTGACT+TGG 0.429963 3_1:+54539384 None:intergenic
TATTCACTGCTTGGGGAGAT+GGG 0.430365 3_1:-54541191 Msa0362780:intron
CGTTTGCCAGGAGCTTTGCC+AGG 0.430608 3_1:-54535615 Msa0362780:CDS
GATGATCAAGAATTTATTGA+TGG 0.431009 3_1:-54537034 Msa0362780:CDS
ATATACAACTGAGAAAATTT+GGG 0.433285 3_1:+54539289 None:intergenic
CACACATGTCTTTGTCATGA+AGG 0.433469 3_1:+54538265 None:intergenic
CTAACAGCAGAGTACAACTT+TGG 0.436553 3_1:+54537907 None:intergenic
GAACTCTCATTCAACACTAA+TGG 0.437186 3_1:+54536282 None:intergenic
AAAGACCCTGGCACAACTCC+TGG 0.437760 3_1:-54535516 Msa0362780:CDS
CATCCACCTCCAAGCGATCC+AGG 0.438235 3_1:+54541443 None:intergenic
TAAGTGCACAGAAGCTGAAA+TGG 0.439717 3_1:+54541378 None:intergenic
GAGGTTGCTGCTCTTATTGT+CGG 0.440240 3_1:-54538870 Msa0362780:CDS
AGCGTCGTTCCTTATAATCC+AGG 0.440593 3_1:-54537691 Msa0362780:CDS
ATTGGTAGTTTGTTGCCAAT+AGG 0.440846 3_1:-54539322 Msa0362780:CDS
ACTCACAAGGTGATAAATAT+CGG 0.441410 3_1:+54537503 None:intergenic
TCCTCCCAGGCCGGCGAACA+TGG 0.441465 3_1:-54541079 Msa0362780:intron
CCGCTTACGCCTGGATCGCT+TGG 0.441523 3_1:-54541452 Msa0362780:CDS
AACTGCCTCTTTACCCGCTC+AGG 0.442639 3_1:+54541309 None:intergenic
TAATGCAAGTTTCCAGATCT+AGG 0.444592 3_1:+54537175 None:intergenic
TCATAGAGGAGGAGCATGCC+AGG 0.448175 3_1:-54541050 Msa0362780:intron
AAGAACAAGTCTGATCATTT+GGG 0.450549 3_1:-54536214 Msa0362780:CDS
AAATGACACTTTGTTGTCTC+GGG 0.453161 3_1:+54537410 None:intergenic
GTTGTGCCAGGGTCTTTGCC+AGG 0.453176 3_1:+54535522 None:intergenic
AGGTCTGCAAATGACTGCTT+TGG 0.458563 3_1:+54535459 None:intergenic
AGCATTGGACAGAACATTAA+GGG 0.459844 3_1:-54536157 Msa0362780:CDS
TTTCAGGTATCCTTTGTAGT+TGG 0.460329 3_1:+54538793 None:intergenic
TCTGCTCCTGGCAAAGCTCC+TGG 0.460974 3_1:+54535609 None:intergenic
ATTAAATTCCACAACAATGT+TGG 0.461297 3_1:+54539502 None:intergenic
GTTAAGGAGGTATCAACCTT+AGG 0.462707 3_1:-54537010 Msa0362780:CDS
GATATGAAGCCAGCTTCTAT+AGG 0.462736 3_1:-54538441 Msa0362780:CDS
TTTGGAAACAAATCCTTGTT+CGG 0.465037 3_1:+54537925 None:intergenic
AAAATGACACTTTGTTGTCT+CGG 0.465288 3_1:+54537409 None:intergenic
GATCCAGGCGTAAGCGGTAA+TGG 0.465353 3_1:+54541458 None:intergenic
AGCATTGACAATACAATCAT+AGG 0.468358 3_1:+54536491 None:intergenic
CCATCGCAAATGGACATGCC+AGG 0.469278 3_1:-54535569 Msa0362780:CDS
ATTTCTATATGTTGCATGAA+AGG 0.469973 3_1:-54539556 Msa0362780:CDS
TAGCTATCCGCATCACCTCC+TGG 0.471658 3_1:+54540932 None:intergenic
CTTTGCCAGGGGTTAACCCC+TGG 0.475079 3_1:-54535384 Msa0362780:CDS
ACATCCGTCTTCTGTCGTTC+CGG 0.475997 3_1:-54541262 Msa0362780:CDS
TGTATGTTTGGCAGCAGACA+TGG 0.476621 3_1:-54536922 Msa0362780:CDS
AACAATGTTTCTTAGTTGGA+TGG 0.477738 3_1:-54537335 Msa0362780:CDS
TTGGCAAAAGGACGTTTGCC+AGG 0.479005 3_1:-54535627 Msa0362780:CDS
AATCTCCTCTTTAGTAATCT+CGG 0.479692 3_1:+54540957 None:intergenic
TGCATCTTTGTTATTGCCTG+GGG 0.481956 3_1:-54536334 Msa0362780:CDS
TACGATTGAATTTCAAAAGA+GGG 0.483185 3_1:-54538040 Msa0362780:CDS
TGATACTTCATTAATAAACC+TGG 0.483787 3_1:+54537673 None:intergenic
ACTTTCTGAACGAAATCTAA+AGG 0.483948 3_1:+54536389 None:intergenic
ATACCCAAATCTCTTACATA+TGG 0.484682 3_1:+54538344 None:intergenic
AAATTCGTACACAATTTGCC+AGG 0.484962 3_1:+54535366 None:intergenic
CATGCCAGGGCTTTAGCTCC+TGG 0.485581 3_1:-54535555 Msa0362780:CDS
TTGTTGTGGAATTTAATCAA+TGG 0.485830 3_1:-54539496 Msa0362780:CDS
ACGCAGACTGTGTTCTGAAA+AGG 0.490949 3_1:+54535439 None:intergenic
CTCTTACTTATCAGATTGCC+AGG 0.493320 3_1:-54540894 Msa0362780:CDS
GTTAGCTAATGCTCGTGATA+AGG 0.494257 3_1:-54537560 Msa0362780:CDS
TAAGGGAAGTCGTGCTGATA+CGG 0.495645 3_1:-54536034 Msa0362780:CDS
AAACTTGAACTTTGCTCAGA+AGG 0.496479 3_1:-54536517 Msa0362780:CDS
GCTTGGAGGTGGATGACGTC+AGG 0.498208 3_1:-54541435 Msa0362780:CDS
AGCTCCAATGATCAATAAAT+GGG 0.499423 3_1:-54536187 Msa0362780:CDS
AGGGGACATTATTATGAAGA+AGG 0.500521 3_1:-54537734 Msa0362780:CDS
TGCACACATATTATTGTGGT+TGG 0.502874 3_1:-54538007 Msa0362780:CDS
GCTCCTGGCAAAGTCGCTCC+TGG 0.504498 3_1:-54535540 Msa0362780:CDS
CAGCTTCTGTGCACTTACTC+GGG 0.504609 3_1:-54541372 Msa0362780:CDS
TAAATGGGCCTTAGAAGCAT+TGG 0.504933 3_1:-54536172 Msa0362780:CDS
GAGGCAGTTATCCTTTGTAC+AGG 0.504938 3_1:-54541295 Msa0362780:CDS
TAATCAATGGTTATGATGAA+AGG 0.504982 3_1:-54539483 Msa0362780:CDS
GTTCTTAATGTTGCATCCAG+TGG 0.507882 3_1:-54536360 Msa0362780:CDS
GCACCATTACCGCTTACGCC+TGG 0.508166 3_1:-54541461 Msa0362780:CDS
GTTGACGGGTATGGAGGTAC+TGG 0.509094 3_1:-54536438 Msa0362780:CDS
CGCATGCACACATATTATTG+TGG 0.509156 3_1:-54538011 Msa0362780:CDS
AGAAATGTGGTGCACTGGCT+TGG 0.510291 3_1:-54539621 Msa0362780:CDS
GGTGAATCAATTATTAGCAA+TGG 0.510327 3_1:-54539033 Msa0362780:CDS
CACAATACCTCATTTGAAGA+AGG 0.511096 3_1:-54539527 Msa0362780:CDS
CTTACGCCTGGATCGCTTGG+AGG 0.512189 3_1:-54541449 Msa0362780:CDS
ACGCCTGGATCGCTTGGAGG+TGG 0.514629 3_1:-54541446 Msa0362780:CDS
TTGTGAGAAATGTGGTGCAC+TGG 0.516247 3_1:-54539626 Msa0362780:CDS
ATATTAATAAAGGAGTTGAC+AGG 0.518030 3_1:-54537591 Msa0362780:CDS
ACTCGGGATGGCTCATGTGC+GGG 0.518382 3_1:-54541356 Msa0362780:CDS
TTCTGTGCACTTACTCGGGA+TGG 0.519138 3_1:-54541368 Msa0362780:CDS
GCAATCTGATAAGTAAGAGC+AGG 0.519162 3_1:+54540898 None:intergenic
ATTTGCCAGGGGTTAACCCC+TGG 0.519753 3_1:+54535379 None:intergenic
AGATGTCAGGCGCTTTGCCA+GGG 0.519948 3_1:-54535396 Msa0362780:CDS
GTTTGCATTCACATCTCTTG+GGG 0.520729 3_1:-54539419 Msa0362780:CDS
GTTGGAGCCTTCTTCAAATG+AGG 0.523333 3_1:+54539520 None:intergenic
TTCAAGATATATTAATTCAA+AGG 0.524986 3_1:-54535816 Msa0362780:intron
AAGGTCAATCTTCCAATTGA+CGG 0.525838 3_1:+54537205 None:intergenic
GAGTGAATTAATGTATGATA+AGG 0.528773 3_1:-54536574 Msa0362780:CDS
CCTTTGATATTCATCGTCGA+TGG 0.529938 3_1:-54537462 Msa0362780:CDS
AGGTCAATCTTCCAATTGAC+GGG 0.535010 3_1:+54537206 None:intergenic
ACATGGGAAATCTTATCAGA+TGG 0.535696 3_1:-54536905 Msa0362780:CDS
GTTGAAGTTAAATGATATGA+TGG 0.535883 3_1:-54538205 Msa0362780:CDS
GCCAGCTTCTATAGGATCGC+GGG 0.537931 3_1:-54538433 Msa0362780:CDS
GTATCAGCACGACTTCCCTT+AGG 0.539023 3_1:+54536036 None:intergenic
CTGGCATGTCCATTTGCGAT+GGG 0.539120 3_1:+54535570 None:intergenic
TACGAGGACATTAAAACGGT+TGG 0.540521 3_1:-54537112 Msa0362780:CDS
AGAATGAAATCCAGAACCTA+AGG 0.540538 3_1:+54536994 None:intergenic
GCAGCAACCTCATGCATTGA+GGG 0.543707 3_1:+54538882 None:intergenic
TTATTTCCATACGGAGAGGA+TGG 0.544567 3_1:-54538735 Msa0362780:CDS
GCAATCCGAGATTACTAAAG+AGG 0.545613 3_1:-54540962 Msa0362780:CDS
CATTGTGTTGATGGACGCTC+AGG 0.545998 3_1:-54541220 Msa0362780:CDS
ATTTATTGATGGTGTTAAGG+AGG 0.546033 3_1:-54537023 Msa0362780:CDS
ACCTAAGTTTAAAATCCACT+TGG 0.546939 3_1:+54535891 None:intergenic
TATCCGTTGTTATTTCCATA+CGG 0.547085 3_1:-54538744 Msa0362780:CDS
AAGTTACGAGGACATTAAAA+CGG 0.548249 3_1:-54537116 Msa0362780:CDS
CGACCACCAATAAATGAAGC+TGG 0.549195 3_1:+54538402 None:intergenic
GCTGTTAATGGAAAATTAGG+TGG 0.549833 3_1:-54536471 Msa0362780:CDS
TAACAAAGATGCAATGCCAC+TGG 0.550434 3_1:+54536344 None:intergenic
GAGGACATTAAAACGGTTGG+TGG 0.551178 3_1:-54537109 Msa0362780:CDS
TCTGCTGCCAAACATACAAT+GGG 0.552964 3_1:+54536927 None:intergenic
GTCAGCAACTGCGTAGGCAC+CGG 0.553458 3_1:+54541243 None:intergenic
AGCAGCAACCTCATGCATTG+AGG 0.556322 3_1:+54538881 None:intergenic
TATAAAACAAGGAAGTATGA+AGG 0.558128 3_1:-54536250 Msa0362780:CDS
CATCGCAAATGGACATGCCA+GGG 0.558147 3_1:-54535568 Msa0362780:CDS
TGAAAACCATCCTCTCCGTA+TGG 0.558542 3_1:+54538729 None:intergenic
TACTAAAGAGGAGATTGTCC+AGG 0.558692 3_1:-54540950 Msa0362780:CDS
ACCAAGTCAAACGACGGTGT+TGG 0.559200 3_1:-54539385 Msa0362780:CDS
AGATTGCCAGGCCGCGCAGG+GGG 0.559809 3_1:-54540882 Msa0362780:CDS
TAACAATTGTCAAGATGCAA+TGG 0.560380 3_1:-54538367 Msa0362780:CDS
TGTGGTGCACTGGCTTGGAT+TGG 0.560468 3_1:-54539616 Msa0362780:CDS
TTCTTTGTTGACGGGTATGG+AGG 0.562113 3_1:-54536444 Msa0362780:CDS
ACGACAGAAGACGGATGTCT+GGG 0.562947 3_1:+54541267 None:intergenic
GTACCGTCATTTACCTGAGC+GGG 0.563529 3_1:-54541322 Msa0362780:CDS
AGTGGGTTTGCTGTTGATGG+TGG 0.563860 3_1:-54539071 Msa0362780:CDS
CCTGGCATGTCCATTTGCGA+TGG 0.563972 3_1:+54535569 None:intergenic
ACCCGCGATCCTATAGAAGC+TGG 0.565460 3_1:+54538432 None:intergenic
AGAGAGGCTTGATGAAGTTG+TGG 0.565859 3_1:-54537377 Msa0362780:CDS
GCGTGGTTATTCACTGCTTG+GGG 0.568038 3_1:-54541198 Msa0362780:CDS
TATACAGACGCAGAGATTCA+GGG 0.569997 3_1:-54537753 Msa0362780:CDS
ATTGACGGGCCTCGCTCGCG+AGG 0.570151 3_1:+54537220 None:intergenic
ATACGATTGAATTTCAAAAG+AGG 0.572108 3_1:-54538041 Msa0362780:CDS
TACTCGGGATGGCTCATGTG+CGG 0.572470 3_1:-54541357 Msa0362780:CDS
GTCTGCTGCCAAACATACAA+TGG 0.573380 3_1:+54536926 None:intergenic
ATTTACCTGAGCGGGTAAAG+AGG 0.573477 3_1:-54541314 Msa0362780:CDS
ATAAGTTAATTGCCTACCCT+CGG 0.573663 3_1:+54537294 None:intergenic
ATGCGCAGAGCTACCGAACA+AGG 0.573983 3_1:-54537938 Msa0362780:CDS
CAGACCTGAAATGTGACAAA+CGG 0.574081 3_1:+54539239 None:intergenic
TCCCAATAACATGTGCTCAA+AGG 0.574363 3_1:+54538696 None:intergenic
CCTCCGCAATTTGTTATGAG+TGG 0.574478 3_1:-54539361 Msa0362780:CDS
GTCGCTCCTGGCAAAGACCC+TGG 0.575182 3_1:-54535528 Msa0362780:CDS
TTGCCAGCTTCATTTATTGG+TGG 0.576087 3_1:-54538405 Msa0362780:CDS
AGAAGGCTCCAACATTGTTG+TGG 0.577346 3_1:-54539510 Msa0362780:CDS
CATGGGAAATCTTATCAGAT+GGG 0.577486 3_1:-54536904 Msa0362780:CDS
ATGATCTGCTCCATGTTCGC+CGG 0.582309 3_1:+54541069 None:intergenic
GAATGGAAACCTCGCGAGCG+AGG 0.583958 3_1:-54537229 Msa0362780:CDS
ATTGTTTCAACAATTTATTG+TGG 0.584548 3_1:-54538571 Msa0362780:CDS
CACAATAATATGTGTGCATG+CGG 0.584919 3_1:+54538012 None:intergenic
GGTCAGAATTATCATCGCAT+TGG 0.586212 3_1:-54539340 Msa0362780:CDS
TCGTTCATCAGAAACAATCA+AGG 0.586239 3_1:-54538516 Msa0362780:CDS
CGATTGAATTTCAAAAGAGG+GGG 0.587770 3_1:-54538038 Msa0362780:CDS
GGCACCGGAACGACAGAAGA+CGG 0.588123 3_1:+54541258 None:intergenic
AATTCGTACACAATTTGCCA+GGG 0.588975 3_1:+54535367 None:intergenic
ACGATTGAATTTCAAAAGAG+GGG 0.592791 3_1:-54538039 Msa0362780:CDS
AAAGTGAGTCGTTGAACTGA+AGG 0.594824 3_1:+54537439 None:intergenic
ATGCAACTATCAACTCATCT+CGG 0.594842 3_1:-54536008 Msa0362780:CDS
ACTCACCAGATGAAATGGAA+TGG 0.595848 3_1:-54537246 Msa0362780:CDS
CACGGAATGGCCAACTACAA+AGG 0.600126 3_1:-54538803 Msa0362780:CDS
TGGTGGACTAGATGAGTCAT+TGG 0.603901 3_1:-54539054 Msa0362780:CDS
GCTTCCAAATCTGCTGCTCA+GGG 0.606172 3_1:-54539580 Msa0362780:CDS
CAGATTGCCAGGCCGCGCAG+GGG 0.606311 3_1:-54540883 Msa0362780:CDS
TGCTCGTGATAAGGATAGTG+CGG 0.607001 3_1:-54537551 Msa0362780:CDS
CCATCGACGATGAATATCAA+AGG 0.608683 3_1:+54537462 None:intergenic
ATTGAGGAAGCAGTGAGTCG+TGG 0.609206 3_1:-54538465 Msa0362780:CDS
ATGTGGTGCATTAGGTATGT+TGG 0.609499 3_1:-54537059 Msa0362780:CDS
CCTGAAATGTGACAAACGGT+TGG 0.610486 3_1:+54539243 None:intergenic
AATAACAACGGATATTGCAA+AGG 0.612058 3_1:+54538753 None:intergenic
AGCAAATAAGAAATATACCG+AGG 0.615077 3_1:-54537311 Msa0362780:CDS
TTGTTGCTAAATGTTCAAGC+GGG 0.615364 3_1:-54537145 Msa0362780:CDS
GTATGTTTGGCAGCAGACAT+GGG 0.616422 3_1:-54536921 Msa0362780:CDS
GCAAATAAGAAATATACCGA+GGG 0.619438 3_1:-54537310 Msa0362780:CDS
ATAAGAAATATACCGAGGGT+AGG 0.621725 3_1:-54537306 Msa0362780:CDS
TTTGCCAGGAGCTAAAGCCC+TGG 0.623529 3_1:+54535551 None:intergenic
CCAAGCGATCCAGGCGTAAG+CGG 0.623918 3_1:+54541452 None:intergenic
TCTGGGAACGTCCTGTACAA+AGG 0.624627 3_1:+54541284 None:intergenic
AGATTGTCCAGGAGGTGATG+CGG 0.624931 3_1:-54540939 Msa0362780:CDS
ATTGTTGCTAAATGTTCAAG+CGG 0.625027 3_1:-54537146 Msa0362780:CDS
AATATTGTTTGTGAGAAATG+TGG 0.627751 3_1:-54539634 Msa0362780:CDS
GATGTCAGGCGCTTTGCCAG+GGG 0.632664 3_1:-54535395 Msa0362780:CDS
GCTCATGTGCGGGAAGAACA+GGG 0.632724 3_1:-54541346 Msa0362780:CDS
ATACAGACGCAGAGATTCAG+GGG 0.632733 3_1:-54537752 Msa0362780:CDS
CAATCTGATAAGTAAGAGCA+GGG 0.634752 3_1:+54540899 None:intergenic
TCCAGATCTAGGAGGAACAA+AGG 0.637979 3_1:+54537186 None:intergenic
TTAGGTGAAGAAGATGATGA+TGG 0.645056 3_1:-54535859 Msa0362780:CDS
TCGTGTTGCAATATAAAACA+AGG 0.645308 3_1:-54536261 Msa0362780:CDS
TGACCACTCATAACAAATTG+CGG 0.646169 3_1:+54539358 None:intergenic
AGCCAGCTTCTATAGGATCG+CGG 0.647144 3_1:-54538434 Msa0362780:CDS
CAACATTCCCTCAATGCATG+AGG 0.648244 3_1:-54538889 Msa0362780:CDS
GAACATGGAGCAGATCATAG+AGG 0.648748 3_1:-54541064 Msa0362780:CDS
GTTGTTATTTCCATACGGAG+AGG 0.648892 3_1:-54538739 Msa0362780:CDS
TTTGCATTCACATCTCTTGG+GGG 0.649341 3_1:-54539418 Msa0362780:CDS
ACAATGTGCCTCAGATGATG+TGG 0.650368 3_1:-54535938 Msa0362780:CDS
TGTTGATGGACGCTCAGGCG+TGG 0.652090 3_1:-54541215 Msa0362780:CDS
GCATCTTTGTTATTGCCTGG+GGG 0.652197 3_1:-54536333 Msa0362780:CDS
ATTCGTACACAATTTGCCAG+GGG 0.654119 3_1:+54535368 None:intergenic
TTGGATTGGCGAGATCGACA+AGG 0.660504 3_1:-54539602 Msa0362780:CDS
ACAATGGTCAGCAACTGCGT+AGG 0.661976 3_1:+54541237 None:intergenic
GTGGACAGATCTAAGGACAA+AGG 0.663231 3_1:-54537358 Msa0362780:CDS
CATGGAGCAGATCATAGAGG+AGG 0.669248 3_1:-54541061 Msa0362780:CDS
ATTCAATGATTGAATCACAG+AGG 0.671791 3_1:-54538542 Msa0362780:CDS
TAAAGAGGAGATTGTCCAGG+AGG 0.672233 3_1:-54540947 Msa0362780:CDS
TTACCCGCTCAGGTAAATGA+CGG 0.674382 3_1:+54541319 None:intergenic
ACATCAAAGAGTTTGCCAAG+TGG 0.684460 3_1:-54535906 Msa0362780:CDS
TATTAATAAAGGAGTTGACA+GGG 0.684532 3_1:-54537590 Msa0362780:CDS
TGCAAGTTTCCAGATCTAGG+AGG 0.689908 3_1:+54537178 None:intergenic
TCTCCGTATGGAAATAACAA+CGG 0.691031 3_1:+54538741 None:intergenic
ATTCTCCAAACAGACTCACA+AGG 0.697407 3_1:+54537490 None:intergenic
GGTTGATGAGAACAATGTAG+TGG 0.698842 3_1:-54539012 Msa0362780:CDS
AGCGGGATGCATAAGTTACG+AGG 0.706451 3_1:-54537128 Msa0362780:CDS
ATAGAAACCAAGTCAAACGA+CGG 0.707442 3_1:-54539391 Msa0362780:CDS
CTGAGCGTCCATCAACACAA+TGG 0.709820 3_1:+54541221 None:intergenic
CCACTCATAACAAATTGCGG+AGG 0.723657 3_1:+54539361 None:intergenic
TTTATGATACATGGACCATG+TGG 0.737590 3_1:-54537880 Msa0362780:CDS
TGTACCGTCATTTACCTGAG+CGG 0.766410 3_1:-54541323 Msa0362780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAATATGATCAATAA+TGG + chr3_1:54537687-54537706 None:intergenic 10.0%
!!! ATTTGTTAATTTTATTTTCT+AGG - chr3_1:54538731-54538750 Msa0362780:CDS 10.0%
!! TTATTTAAGCATATTAATAA+AGG - chr3_1:54539199-54539218 Msa0362780:intron 10.0%
!!! ATTTTAGATGAATTTTCAAT+TGG - chr3_1:54536165-54536184 Msa0362780:CDS 15.0%
!!! TTATTTTTTTTTAGCAGAAA+TGG - chr3_1:54536572-54536591 Msa0362780:CDS 15.0%
!! AATTAAAACATTTCACAAAA+AGG + chr3_1:54537022-54537041 None:intergenic 15.0%
!!! AAAATTTGTTAATATTGTGT+TGG - chr3_1:54538678-54538697 Msa0362780:CDS 15.0%
!! GAAATTATTATATTGCTATA+TGG - chr3_1:54540017-54540036 Msa0362780:intron 15.0%
!! TTCAAGATATATTAATTCAA+AGG - chr3_1:54540984-54541003 Msa0362780:intron 15.0%
!! ATATTCATCCAATATTTAAC+AGG + chr3_1:54536115-54536134 None:intergenic 20.0%
!! AATATTGGATGAATATGTTT+AGG - chr3_1:54536119-54536138 Msa0362780:CDS 20.0%
!!! ATGAATTTTCAATTGGTTAT+TGG - chr3_1:54536172-54536191 Msa0362780:CDS 20.0%
!!! AATCTTAGATGAATTTGTTT+AGG - chr3_1:54536200-54536219 Msa0362780:CDS 20.0%
!! TCAAATTCTTATCTAACAAA+TGG + chr3_1:54536516-54536535 None:intergenic 20.0%
!! TTATTTAATGAATCTGAACA+AGG + chr3_1:54536785-54536804 None:intergenic 20.0%
!!! TTTTTTTCTTCCAGTTTATT+CGG - chr3_1:54537129-54537148 Msa0362780:CDS 20.0%
!! TATATGATCGTATATGTTTA+AGG + chr3_1:54537354-54537373 None:intergenic 20.0%
!! ATATACAACTGAGAAAATTT+GGG + chr3_1:54537514-54537533 None:intergenic 20.0%
!! TATATACAACTGAGAAAATT+TGG + chr3_1:54537515-54537534 None:intergenic 20.0%
!! AAGCAACATAATATGTATAT+AGG + chr3_1:54537637-54537656 None:intergenic 20.0%
!! ATTGTTTCAACAATTTATTG+TGG - chr3_1:54538229-54538248 Msa0362780:CDS 20.0%
!!! TTCAAAAAGGGAATTTTTTT+TGG - chr3_1:54538623-54538642 Msa0362780:CDS 20.0%
!!! GTTAGTAATTTTATGATACA+TGG - chr3_1:54538911-54538930 Msa0362780:CDS 20.0%
!! ATTAATAAACCTGGATTATA+AGG + chr3_1:54539121-54539140 None:intergenic 20.0%
!! AGATATATTAATTCAAAGGT+CGG - chr3_1:54540988-54541007 Msa0362780:intron 20.0%
! CATAGAAATACGAAAATGTA+CGG + chr3_1:54536038-54536057 None:intergenic 25.0%
! GAATATGTTTAGGTATCAAT+TGG - chr3_1:54536129-54536148 Msa0362780:CDS 25.0%
!!! TTTTTTTAGCAGAAATGGAT+TGG - chr3_1:54536577-54536596 Msa0362780:CDS 25.0%
! TCTTGCATATGGAAAAAATT+GGG - chr3_1:54536662-54536681 Msa0362780:CDS 25.0%
! ATCAATATCAAACAATGAAG+AGG - chr3_1:54536886-54536905 Msa0362780:intron 25.0%
! AATATTGTTTGTGAGAAATG+TGG - chr3_1:54537166-54537185 Msa0362780:CDS 25.0%
! ATTTCTATATGTTGCATGAA+AGG - chr3_1:54537244-54537263 Msa0362780:CDS 25.0%
! ATTAAATTCCACAACAATGT+TGG + chr3_1:54537301-54537320 None:intergenic 25.0%
! TTGTTGTGGAATTTAATCAA+TGG - chr3_1:54537304-54537323 Msa0362780:CDS 25.0%
! TAATCAATGGTTATGATGAA+AGG - chr3_1:54537317-54537336 Msa0362780:CDS 25.0%
!! AAGACATAATTTTGCATTCA+CGG - chr3_1:54537979-54537998 Msa0362780:CDS 25.0%
! GTTGAATTTCTAACCAATTT+GGG + chr3_1:54538511-54538530 None:intergenic 25.0%
!! ATATTGCATGTAGAGTTTTT+CGG - chr3_1:54538573-54538592 Msa0362780:CDS 25.0%
! GTTGAAGTTAAATGATATGA+TGG - chr3_1:54538595-54538614 Msa0362780:CDS 25.0%
!!! TGTTAATATTGTGTTGGTTT+TGG - chr3_1:54538684-54538703 Msa0362780:CDS 25.0%
! ATACGATTGAATTTCAAAAG+AGG - chr3_1:54538759-54538778 Msa0362780:CDS 25.0%
! TACGATTGAATTTCAAAAGA+GGG - chr3_1:54538760-54538779 Msa0362780:CDS 25.0%
! TGATACTTCATTAATAAACC+TGG + chr3_1:54539130-54539149 None:intergenic 25.0%
! ATATTAATAAAGGAGTTGAC+AGG - chr3_1:54539209-54539228 Msa0362780:intron 25.0%
! TATTAATAAAGGAGTTGACA+GGG - chr3_1:54539210-54539229 Msa0362780:intron 25.0%
! GATGATCAAGAATTTATTGA+TGG - chr3_1:54539766-54539785 Msa0362780:intron 25.0%
!!! AGAATTTATTGATGGTGTTA+AGG - chr3_1:54539774-54539793 Msa0362780:intron 25.0%
! AGAAGTTATCAAATCTGAAA+AGG + chr3_1:54540069-54540088 None:intergenic 25.0%
!! ACATGAGTTTTTAACACTTT+CGG + chr3_1:54540093-54540112 None:intergenic 25.0%
! AAGTGTTAAAAACTCATGTT+TGG - chr3_1:54540094-54540113 Msa0362780:intron 25.0%
! TTTGAATGGGAAAACATTAA+AGG - chr3_1:54540139-54540158 Msa0362780:intron 25.0%
! GAGTGAATTAATGTATGATA+AGG - chr3_1:54540226-54540245 Msa0362780:intron 25.0%
! TGCATAATATTCTTTATGCT+TGG + chr3_1:54540264-54540283 None:intergenic 25.0%
!! GTACTGGTAAAACTTATTTA+TGG - chr3_1:54540378-54540397 Msa0362780:intron 25.0%
!! TATAAAACAAGGAAGTATGA+AGG - chr3_1:54540550-54540569 Msa0362780:intron 25.0%
! ATTTGATTGTGCAAATAGTA+TGG - chr3_1:54540676-54540695 Msa0362780:intron 25.0%
!! AATTTTACCAGTTATTCCTA+AGG - chr3_1:54540748-54540767 Msa0362780:intron 25.0%
!! ATTTTACCAGTTATTCCTAA+GGG - chr3_1:54540749-54540768 Msa0362780:intron 25.0%
!! ACATTGTAACCTCATATTTT+CGG + chr3_1:54540849-54540868 None:intergenic 25.0%
! GTTTAATGATAAGTTCTTTC+AGG - chr3_1:54541066-54541085 Msa0362780:CDS 25.0%
GCATATAGCTGATGATATTA+TGG - chr3_1:54535811-54535830 Msa0362780:intron 30.0%
AATCTCCTCTTTAGTAATCT+CGG + chr3_1:54535846-54535865 None:intergenic 30.0%
CAACATGGCTGATTATTATT+AGG - chr3_1:54535956-54535975 Msa0362780:CDS 30.0%
ACCATGTTCCTGTTAAATAT+TGG - chr3_1:54536104-54536123 Msa0362780:CDS 30.0%
TCCAATATTTAACAGGAACA+TGG + chr3_1:54536108-54536127 None:intergenic 30.0%
! TGAATTTGTTTAGGTACCAA+AGG - chr3_1:54536209-54536228 Msa0362780:CDS 30.0%
!! ACAAATGGATTACTAGTTCA+TGG + chr3_1:54536501-54536520 None:intergenic 30.0%
ATATCGTATGCTTAAGGTTA+AGG + chr3_1:54536626-54536645 None:intergenic 30.0%
TAACCTTAAGCATACGATAT+TGG - chr3_1:54536626-54536645 Msa0362780:CDS 30.0%
AACCTTAAGCATACGATATT+GGG - chr3_1:54536627-54536646 Msa0362780:CDS 30.0%
GTCTTGCATATGGAAAAAAT+TGG - chr3_1:54536661-54536680 Msa0362780:CDS 30.0%
!! TTTTTAAAAAGCGAGGAACA+AGG - chr3_1:54536950-54536969 Msa0362780:CDS 30.0%
TCTATGCCTTCTAATGAATT+TGG - chr3_1:54537058-54537077 Msa0362780:CDS 30.0%
ATTCAGCCAAATTCATTAGA+AGG + chr3_1:54537067-54537086 None:intergenic 30.0%
GGTGAATCAATTATTAGCAA+TGG - chr3_1:54537767-54537786 Msa0362780:CDS 30.0%
!!! GATTTTGATTACTCTGATAC+TGG - chr3_1:54537954-54537973 Msa0362780:CDS 30.0%
! ATAATTTTGCATTCACGGAA+TGG - chr3_1:54537984-54538003 Msa0362780:CDS 30.0%
! ATATTGCAAAGGCATGTAAT+TGG + chr3_1:54538039-54538058 None:intergenic 30.0%
AATAACAACGGATATTGCAA+AGG + chr3_1:54538050-54538069 None:intergenic 30.0%
!! TATCCGTTGTTATTTCCATA+CGG - chr3_1:54538056-54538075 Msa0362780:intron 30.0%
!! TGAGAGAATTCATTGCTTTT+CGG - chr3_1:54538159-54538178 Msa0362780:intron 30.0%
ATTCAATGATTGAATCACAG+AGG - chr3_1:54538258-54538277 Msa0362780:CDS 30.0%
TAACAATTGTCAAGATGCAA+TGG - chr3_1:54538433-54538452 Msa0362780:CDS 30.0%
ATACCCAAATCTCTTACATA+TGG + chr3_1:54538459-54538478 None:intergenic 30.0%
GTCATTGTCAAGAATAAATC+TGG + chr3_1:54538482-54538501 None:intergenic 30.0%
CGTTGAATTTCTAACCAATT+TGG + chr3_1:54538512-54538531 None:intergenic 30.0%
AAAACTCTACATGCAATATC+TGG + chr3_1:54538572-54538591 None:intergenic 30.0%
ACGATTGAATTTCAAAAGAG+GGG - chr3_1:54538761-54538780 Msa0362780:CDS 30.0%
! TAAGTTGAATACTGTGAGTT+TGG - chr3_1:54538826-54538845 Msa0362780:CDS 30.0%
TTTGGAAACAAATCCTTGTT+CGG + chr3_1:54538878-54538897 None:intergenic 30.0%
AATTCACCTTGCATGAAAAA+TGG - chr3_1:54538956-54538975 Msa0362780:CDS 30.0%
!! GAGTGTCATTTGATGAAAAA+GGG - chr3_1:54539017-54539036 Msa0362780:CDS 30.0%
TATGAAGAAGGACACTAAAT+TGG - chr3_1:54539078-54539097 Msa0362780:intron 30.0%
ACTCACAAGGTGATAAATAT+CGG + chr3_1:54539300-54539319 None:intergenic 30.0%
! AAAATGACACTTTGTTGTCT+CGG + chr3_1:54539394-54539413 None:intergenic 30.0%
! TCATTTTCAATGATTCAGAG+AGG - chr3_1:54539407-54539426 Msa0362780:CDS 30.0%
AAGGAACAATGTTTCTTAGT+TGG - chr3_1:54539461-54539480 Msa0362780:CDS 30.0%
AACAATGTTTCTTAGTTGGA+TGG - chr3_1:54539465-54539484 Msa0362780:CDS 30.0%
AGCAAATAAGAAATATACCG+AGG - chr3_1:54539489-54539508 Msa0362780:CDS 30.0%
GCAAATAAGAAATATACCGA+GGG - chr3_1:54539490-54539509 Msa0362780:CDS 30.0%
GGTGAGTAAACAAAAAACAT+GGG + chr3_1:54539541-54539560 None:intergenic 30.0%
TGGTGAGTAAACAAAAAACA+TGG + chr3_1:54539542-54539561 None:intergenic 30.0%
ATTGTTGCTAAATGTTCAAG+CGG - chr3_1:54539654-54539673 Msa0362780:CDS 30.0%
AAGTTACGAGGACATTAAAA+CGG - chr3_1:54539684-54539703 Msa0362780:intron 30.0%
!! ATTTATTGATGGTGTTAAGG+AGG - chr3_1:54539777-54539796 Msa0362780:intron 30.0%
GATGGGATTATGTATGAAAA+AGG - chr3_1:54539913-54539932 Msa0362780:intron 30.0%
! CATGAGTTTTTAACACTTTC+GGG + chr3_1:54540092-54540111 None:intergenic 30.0%
! AAAAGCTTTTGCGTTTGAAT+GGG - chr3_1:54540126-54540145 Msa0362780:intron 30.0%
AATTCAGAAAAATCCAGAGA+TGG + chr3_1:54540179-54540198 None:intergenic 30.0%
! TCTCTGGATTTTTCTGAATT+AGG - chr3_1:54540179-54540198 Msa0362780:intron 30.0%
!! AGCATTGACAATACAATCAT+AGG + chr3_1:54540312-54540331 None:intergenic 30.0%
ACTTTCTGAACGAAATCTAA+AGG + chr3_1:54540414-54540433 None:intergenic 30.0%
TAGATTTCGTTCAGAAAGTA+AGG - chr3_1:54540415-54540434 Msa0362780:intron 30.0%
TCGTGTTGCAATATAAAACA+AGG - chr3_1:54540539-54540558 Msa0362780:intron 30.0%
AAAGAACAAGTCTGATCATT+TGG - chr3_1:54540585-54540604 Msa0362780:intron 30.0%
AAGAACAAGTCTGATCATTT+GGG - chr3_1:54540586-54540605 Msa0362780:intron 30.0%
AAGCTCCAATGATCAATAAA+TGG - chr3_1:54540612-54540631 Msa0362780:intron 30.0%
AGCTCCAATGATCAATAAAT+GGG - chr3_1:54540613-54540632 Msa0362780:intron 30.0%
! AATAGTATGGATCAACCTTT+TGG - chr3_1:54540689-54540708 Msa0362780:intron 30.0%
! ACAATAGTTTTTCCACCAAA+AGG + chr3_1:54540707-54540726 None:intergenic 30.0%
! TGGTGGAAAAACTATTGTTT+TGG - chr3_1:54540709-54540728 Msa0362780:intron 30.0%
! GGTGGAAAAACTATTGTTTT+GGG - chr3_1:54540710-54540729 Msa0362780:intron 30.0%
TCAAACTAACCGAAAATATG+AGG - chr3_1:54540837-54540856 Msa0362780:intron 30.0%
! ACCTAAGTTTAAAATCCACT+TGG + chr3_1:54540912-54540931 None:intergenic 30.0%
! TGGATTTTAAACTTAGGTGA+TGG - chr3_1:54540914-54540933 Msa0362780:CDS 30.0%
!! AACTTAGGTGATGGAAAATT+AGG - chr3_1:54540923-54540942 Msa0362780:CDS 30.0%
GCTTCTACAATGTCTTTAAT+AGG + chr3_1:54541019-54541038 None:intergenic 30.0%
! CAACTTATCCAGATTTTCTT+GGG - chr3_1:54541038-54541057 Msa0362780:intron 30.0%
AACAAATTCCCAAGAAAATC+TGG + chr3_1:54541049-54541068 None:intergenic 30.0%
ACATTTCTTGTAGTGAATGT+TGG + chr3_1:54541109-54541128 None:intergenic 30.0%
! ATCATTTTCAGAAAGATGTC+AGG - chr3_1:54541391-54541410 Msa0362780:CDS 30.0%
! ACGTCAGGTTTTTCTACTTA+TGG - chr3_1:54535380-54535399 Msa0362780:CDS 35.0%
CAATCTGATAAGTAAGAGCA+GGG + chr3_1:54535904-54535923 None:intergenic 35.0%
TGTTTAGGTACCAAAGGATT+TGG - chr3_1:54536215-54536234 Msa0362780:CDS 35.0%
TCTTTCCTAACCAAATCCTT+TGG + chr3_1:54536228-54536247 None:intergenic 35.0%
TTCTTAGCTAACAAACCTCA+TGG + chr3_1:54536473-54536492 None:intergenic 35.0%
!! CAGAAATGGATTGGTCAAAA+TGG - chr3_1:54536586-54536605 Msa0362780:CDS 35.0%
!! ATGGATTGGTCAAAATGGTA+AGG - chr3_1:54536591-54536610 Msa0362780:CDS 35.0%
AACCCAATATCGTATGCTTA+AGG + chr3_1:54536632-54536651 None:intergenic 35.0%
!!! TTTTTTCCATATGCAAGACC+AGG + chr3_1:54536660-54536679 None:intergenic 35.0%
!!! TAACCGCTTTTTAAAAAGCG+AGG - chr3_1:54536943-54536962 Msa0362780:CDS 35.0%
!!! GTTCCTCGCTTTTTAAAAAG+CGG + chr3_1:54536949-54536968 None:intergenic 35.0%
CTTCCAGTTTATTCGGATAT+TGG - chr3_1:54537136-54537155 Msa0362780:CDS 35.0%
TCACCAATATCCGAATAAAC+TGG + chr3_1:54537142-54537161 None:intergenic 35.0%
CACAATACCTCATTTGAAGA+AGG - chr3_1:54537273-54537292 Msa0362780:CDS 35.0%
ATGTTTGCATTCACATCTCT+TGG - chr3_1:54537379-54537398 Msa0362780:CDS 35.0%
TGTTTGCATTCACATCTCTT+GGG - chr3_1:54537380-54537399 Msa0362780:CDS 35.0%
ATAGAAACCAAGTCAAACGA+CGG - chr3_1:54537409-54537428 Msa0362780:CDS 35.0%
TGACCACTCATAACAAATTG+CGG + chr3_1:54537445-54537464 None:intergenic 35.0%
!! ATTGGTAGTTTGTTGCCAAT+AGG - chr3_1:54537478-54537497 Msa0362780:CDS 35.0%
TTGGGCATATATGTTCCTAT+TGG + chr3_1:54537496-54537515 None:intergenic 35.0%
TTCAAACCTTTGTGTACAGT+GGG - chr3_1:54537712-54537731 Msa0362780:CDS 35.0%
! AAAGTCTTTTAGACGTGTGA+GGG - chr3_1:54537812-54537831 Msa0362780:CDS 35.0%
ACGATGTCTAAAAAGACGTA+AGG + chr3_1:54537871-54537890 None:intergenic 35.0%
! TTTCAGGTATCCTTTGTAGT+TGG + chr3_1:54538010-54538029 None:intergenic 35.0%
ATGTAATTGGCATGAGTTTC+AGG + chr3_1:54538026-54538045 None:intergenic 35.0%
TCTCCGTATGGAAATAACAA+CGG + chr3_1:54538062-54538081 None:intergenic 35.0%
TTCCTTTGAGCACATGTTAT+TGG - chr3_1:54538102-54538121 Msa0362780:intron 35.0%
TCCTTTGAGCACATGTTATT+GGG - chr3_1:54538103-54538122 Msa0362780:intron 35.0%
TCGTTCATCAGAAACAATCA+AGG - chr3_1:54538284-54538303 Msa0362780:CDS 35.0%
!! ATCAGATCTGAGTTTTTGAG+TGG - chr3_1:54538311-54538330 Msa0362780:CDS 35.0%
!!! TGAGTTTTTGAGTGGAATTG+AGG - chr3_1:54538319-54538338 Msa0362780:CDS 35.0%
GTATTGCCAGCTTCATTTAT+TGG - chr3_1:54538392-54538411 Msa0362780:CDS 35.0%
ATGGCCATATGTAAGAGATT+TGG - chr3_1:54538452-54538471 Msa0362780:CDS 35.0%
TGGCCATATGTAAGAGATTT+GGG - chr3_1:54538453-54538472 Msa0362780:CDS 35.0%
CAATGACATGTAACCCAAAT+TGG - chr3_1:54538495-54538514 Msa0362780:CDS 35.0%
! TATGATGGCTGACTTCAAAA+AGG - chr3_1:54538610-54538629 Msa0362780:CDS 35.0%
! ATGATGGCTGACTTCAAAAA+GGG - chr3_1:54538611-54538630 Msa0362780:CDS 35.0%
CGATTGAATTTCAAAAGAGG+GGG - chr3_1:54538762-54538781 Msa0362780:CDS 35.0%
CACAATAATATGTGTGCATG+CGG + chr3_1:54538791-54538810 None:intergenic 35.0%
TGCACACATATTATTGTGGT+TGG - chr3_1:54538793-54538812 Msa0362780:CDS 35.0%
TTTATGATACATGGACCATG+TGG - chr3_1:54538920-54538939 Msa0362780:CDS 35.0%
!! CATCTACCATTTTTCATGCA+AGG + chr3_1:54538965-54538984 None:intergenic 35.0%
!!! CTCGTGCTGCAAATTTTTTT+GGG + chr3_1:54539000-54539019 None:intergenic 35.0%
!!! ACTCGTGCTGCAAATTTTTT+TGG + chr3_1:54539001-54539020 None:intergenic 35.0%
!! CGAGTGTCATTTGATGAAAA+AGG - chr3_1:54539016-54539035 Msa0362780:CDS 35.0%
AGGGGACATTATTATGAAGA+AGG - chr3_1:54539066-54539085 Msa0362780:CDS 35.0%
! AAATGACACTTTGTTGTCTC+GGG + chr3_1:54539393-54539412 None:intergenic 35.0%
ATAAGAAATATACCGAGGGT+AGG - chr3_1:54539494-54539513 Msa0362780:CDS 35.0%
ATAAGTTAATTGCCTACCCT+CGG + chr3_1:54539509-54539528 None:intergenic 35.0%
TGTTTACTCACCAGATGAAA+TGG - chr3_1:54539549-54539568 Msa0362780:CDS 35.0%
AAGGTCAATCTTCCAATTGA+CGG + chr3_1:54539598-54539617 None:intergenic 35.0%
TAATGCAAGTTTCCAGATCT+AGG + chr3_1:54539628-54539647 None:intergenic 35.0%
TTGTTGCTAAATGTTCAAGC+GGG - chr3_1:54539655-54539674 Msa0362780:CDS 35.0%
AGAATGAAATCCAGAACCTA+AGG + chr3_1:54539809-54539828 None:intergenic 35.0%
!! TAGGTTCTGGATTTCATTCT+AGG - chr3_1:54539809-54539828 Msa0362780:intron 35.0%
ACATGGGAAATCTTATCAGA+TGG - chr3_1:54539895-54539914 Msa0362780:intron 35.0%
CATGGGAAATCTTATCAGAT+GGG - chr3_1:54539896-54539915 Msa0362780:intron 35.0%
! GAAAAGCTTTTGCGTTTGAA+TGG - chr3_1:54540125-54540144 Msa0362780:intron 35.0%
AAACTTGAACTTTGCTCAGA+AGG - chr3_1:54540283-54540302 Msa0362780:intron 35.0%
!!! GGTGGTTTTTTCTTTGTTGA+CGG - chr3_1:54540347-54540366 Msa0362780:intron 35.0%
!!! GTGGTTTTTTCTTTGTTGAC+GGG - chr3_1:54540348-54540367 Msa0362780:intron 35.0%
!! TTTTTCTTTGTTGACGGGTA+TGG - chr3_1:54540353-54540372 Msa0362780:intron 35.0%
!! ATTGCATCTTTGTTATTGCC+TGG - chr3_1:54540464-54540483 Msa0362780:intron 35.0%
!! TTGCATCTTTGTTATTGCCT+GGG - chr3_1:54540465-54540484 Msa0362780:intron 35.0%
GAACTCTCATTCAACACTAA+TGG + chr3_1:54540521-54540540 None:intergenic 35.0%
AAGGCCCATTTATTGATCAT+TGG + chr3_1:54540620-54540639 None:intergenic 35.0%
!! AAGCATTGGACAGAACATTA+AGG - chr3_1:54540642-54540661 Msa0362780:intron 35.0%
! AGCATTGGACAGAACATTAA+GGG - chr3_1:54540643-54540662 Msa0362780:intron 35.0%
!!! GGAAAAACTATTGTTTTGGG+TGG - chr3_1:54540713-54540732 Msa0362780:intron 35.0%
ATGCAACTATCAACTCATCT+CGG - chr3_1:54540792-54540811 Msa0362780:intron 35.0%
!! GCCAAGTGGATTTTAAACTT+AGG - chr3_1:54540908-54540927 Msa0362780:CDS 35.0%
TTAGGTGAAGAAGATGATGA+TGG - chr3_1:54540941-54540960 Msa0362780:CDS 35.0%
! GCAACTTATCCAGATTTTCT+TGG - chr3_1:54541037-54541056 Msa0362780:intron 35.0%
! AAGAAATGTTGCATTTTGCC+AGG - chr3_1:54541120-54541139 Msa0362780:intron 35.0%
! AGAAATGTTGCATTTTGCCA+GGG - chr3_1:54541121-54541140 Msa0362780:intron 35.0%
!! AGGCTTTTTGCATTTTGACA+GGG + chr3_1:54541154-54541173 None:intergenic 35.0%
!! AAGGCTTTTTGCATTTTGAC+AGG + chr3_1:54541155-54541174 None:intergenic 35.0%
TGTCAAAATGCAAAAAGCCT+TGG - chr3_1:54541154-54541173 Msa0362780:intron 35.0%
AATTCGTACACAATTTGCCA+GGG + chr3_1:54541436-54541455 None:intergenic 35.0%
AAATTCGTACACAATTTGCC+AGG + chr3_1:54541437-54541456 None:intergenic 35.0%
TAAGTGCACAGAAGCTGAAA+TGG + chr3_1:54535425-54535444 None:intergenic 40.0%
TAGCTGATGATATTATGGCC+AGG - chr3_1:54535816-54535835 Msa0362780:intron 40.0%
TTTAGTAATCTCGGATTGCC+TGG + chr3_1:54535837-54535856 None:intergenic 40.0%
GCAATCCGAGATTACTAAAG+AGG - chr3_1:54535838-54535857 Msa0362780:CDS 40.0%
TACTAAAGAGGAGATTGTCC+AGG - chr3_1:54535850-54535869 Msa0362780:CDS 40.0%
GCAATCTGATAAGTAAGAGC+AGG + chr3_1:54535905-54535924 None:intergenic 40.0%
CTCTTACTTATCAGATTGCC+AGG - chr3_1:54535906-54535925 Msa0362780:CDS 40.0%
! AGGTACCAAAGGATTTGGTT+AGG - chr3_1:54536220-54536239 Msa0362780:CDS 40.0%
! GATTTGGTTAGGAAAGACAC+TGG - chr3_1:54536231-54536250 Msa0362780:CDS 40.0%
AAAATGATCCAGACACGTAG+CGG - chr3_1:54536269-54536288 Msa0362780:CDS 40.0%
! TTAACATCCGTTGGTCTAAC+CGG + chr3_1:54536360-54536379 None:intergenic 40.0%
TAGCTCACTAGTAATCCATG+AGG - chr3_1:54536455-54536474 Msa0362780:CDS 40.0%
TGGAAAAAATTGGGCTGAGA+AGG - chr3_1:54536671-54536690 Msa0362780:CDS 40.0%
GGAAAAAATTGGGCTGAGAA+GGG - chr3_1:54536672-54536691 Msa0362780:CDS 40.0%
TAGCGATGACTAATCTCCAT+CGG + chr3_1:54536728-54536747 None:intergenic 40.0%
TTAAAAAGCGAGGAACAAGG+TGG - chr3_1:54536953-54536972 Msa0362780:CDS 40.0%
TAAAAAGCGAGGAACAAGGT+GGG - chr3_1:54536954-54536973 Msa0362780:CDS 40.0%
GTTTGCATTCACATCTCTTG+GGG - chr3_1:54537381-54537400 Msa0362780:CDS 40.0%
TTTGCATTCACATCTCTTGG+GGG - chr3_1:54537382-54537401 Msa0362780:CDS 40.0%
GGTCAGAATTATCATCGCAT+TGG - chr3_1:54537460-54537479 Msa0362780:CDS 40.0%
CAGACCTGAAATGTGACAAA+CGG + chr3_1:54537564-54537583 None:intergenic 40.0%
GTTCAAACCTTTGTGTACAG+TGG - chr3_1:54537711-54537730 Msa0362780:CDS 40.0%
!! GGTTGATGAGAACAATGTAG+TGG - chr3_1:54537788-54537807 Msa0362780:CDS 40.0%
! CAAAGTCTTTTAGACGTGTG+AGG - chr3_1:54537811-54537830 Msa0362780:CDS 40.0%
!! GTTGTTATTTCCATACGGAG+AGG - chr3_1:54538061-54538080 Msa0362780:intron 40.0%
TTATTTCCATACGGAGAGGA+TGG - chr3_1:54538065-54538084 Msa0362780:intron 40.0%
TCCCAATAACATGTGCTCAA+AGG + chr3_1:54538107-54538126 None:intergenic 40.0%
! CACACGAACTCTTTTTCTAG+TGG + chr3_1:54538135-54538154 None:intergenic 40.0%
GATATGAAGCCAGCTTCTAT+AGG - chr3_1:54538359-54538378 Msa0362780:CDS 40.0%
TTGCCAGCTTCATTTATTGG+TGG - chr3_1:54538395-54538414 Msa0362780:CDS 40.0%
CACACATGTCTTTGTCATGA+AGG + chr3_1:54538538-54538557 None:intergenic 40.0%
CGCATGCACACATATTATTG+TGG - chr3_1:54538789-54538808 Msa0362780:CDS 40.0%
CTAACAGCAGAGTACAACTT+TGG + chr3_1:54538896-54538915 None:intergenic 40.0%
!! TTTTGATGACTAGCACCACA+TGG + chr3_1:54538938-54538957 None:intergenic 40.0%
GAATCTCTGCGTCTGTATAT+TGG + chr3_1:54539046-54539065 None:intergenic 40.0%
ATATACAGACGCAGAGATTC+AGG - chr3_1:54539046-54539065 Msa0362780:CDS 40.0%
TATACAGACGCAGAGATTCA+GGG - chr3_1:54539047-54539066 Msa0362780:CDS 40.0%
GTTAGCTAATGCTCGTGATA+AGG - chr3_1:54539240-54539259 Msa0362780:intron 40.0%
TATCACCTTGTGAGTCTGTT+TGG - chr3_1:54539305-54539324 Msa0362780:CDS 40.0%
ATTCTCCAAACAGACTCACA+AGG + chr3_1:54539313-54539332 None:intergenic 40.0%
CCATCGACGATGAATATCAA+AGG + chr3_1:54539341-54539360 None:intergenic 40.0%
CCTTTGATATTCATCGTCGA+TGG - chr3_1:54539338-54539357 Msa0362780:CDS 40.0%
AAAGTGAGTCGTTGAACTGA+AGG + chr3_1:54539364-54539383 None:intergenic 40.0%
TGAAGTTGTGGACAGATCTA+AGG - chr3_1:54539435-54539454 Msa0362780:CDS 40.0%
ACTCACCAGATGAAATGGAA+TGG - chr3_1:54539554-54539573 Msa0362780:CDS 40.0%
GGTTTCCATTCCATTTCATC+TGG + chr3_1:54539562-54539581 None:intergenic 40.0%
AGGTCAATCTTCCAATTGAC+GGG + chr3_1:54539597-54539616 None:intergenic 40.0%
TACGAGGACATTAAAACGGT+TGG - chr3_1:54539688-54539707 Msa0362780:intron 40.0%
!! GATACTTTTCGAGAAGCATG+TGG - chr3_1:54539724-54539743 Msa0362780:intron 40.0%
ATGTGGTGCATTAGGTATGT+TGG - chr3_1:54539741-54539760 Msa0362780:intron 40.0%
!! GTTAAGGAGGTATCAACCTT+AGG - chr3_1:54539790-54539809 Msa0362780:intron 40.0%
TCTGCTGCCAAACATACAAT+GGG + chr3_1:54539876-54539895 None:intergenic 40.0%
GTTCTTAATGTTGCATCCAG+TGG - chr3_1:54540440-54540459 Msa0362780:intron 40.0%
TAACAAAGATGCAATGCCAC+TGG + chr3_1:54540459-54540478 None:intergenic 40.0%
!! TGCATCTTTGTTATTGCCTG+GGG - chr3_1:54540466-54540485 Msa0362780:intron 40.0%
! TAAATGGGCCTTAGAAGCAT+TGG - chr3_1:54540628-54540647 Msa0362780:intron 40.0%
TGTTCTGTCCAATGCTTCTA+AGG + chr3_1:54540639-54540658 None:intergenic 40.0%
! AGTATGGATCAACCTTTTGG+TGG - chr3_1:54540692-54540711 Msa0362780:intron 40.0%
CTATCAACTCATCTCGGTTA+TGG - chr3_1:54540798-54540817 Msa0362780:intron 40.0%
! TCCATTTTCCACATCATCTG+AGG + chr3_1:54540873-54540892 None:intergenic 40.0%
ACATCAAAGAGTTTGCCAAG+TGG - chr3_1:54540894-54540913 Msa0362780:CDS 40.0%
! GAAATGTTGCATTTTGCCAG+GGG - chr3_1:54541122-54541141 Msa0362780:intron 40.0%
ATGCAAAAAGCCTTGGCAAA+AGG - chr3_1:54541161-54541180 Msa0362780:intron 40.0%
ATTCGTACACAATTTGCCAG+GGG + chr3_1:54541435-54541454 None:intergenic 40.0%
TCAGCTTCTGTGCACTTACT+CGG - chr3_1:54535427-54535446 Msa0362780:CDS 45.0%
TGTACCGTCATTTACCTGAG+CGG - chr3_1:54535477-54535496 Msa0362780:CDS 45.0%
TTACCCGCTCAGGTAAATGA+CGG + chr3_1:54535484-54535503 None:intergenic 45.0%
ATTTACCTGAGCGGGTAAAG+AGG - chr3_1:54535486-54535505 Msa0362780:CDS 45.0%
GAGGCAGTTATCCTTTGTAC+AGG - chr3_1:54535505-54535524 Msa0362780:CDS 45.0%
GTTGCTGACCATTGTGTTGA+TGG - chr3_1:54535571-54535590 Msa0362780:CDS 45.0%
TTATTCACTGCTTGGGGAGA+TGG - chr3_1:54535608-54535627 Msa0362780:CDS 45.0%
TATTCACTGCTTGGGGAGAT+GGG - chr3_1:54535609-54535628 Msa0362780:CDS 45.0%
GAACATGGAGCAGATCATAG+AGG - chr3_1:54535736-54535755 Msa0362780:intron 45.0%
TAAAGAGGAGATTGTCCAGG+AGG - chr3_1:54535853-54535872 Msa0362780:CDS 45.0%
GACACTGGAAAATGAGTTCC+TGG - chr3_1:54536246-54536265 Msa0362780:CDS 45.0%
! ACGTGTCTGGATCATTTTCC+AGG + chr3_1:54536267-54536286 None:intergenic 45.0%
TTAACAACCACTGGATGCAG+CGG - chr3_1:54536295-54536314 Msa0362780:CDS 45.0%
AAATACCTAAATGCCCCCAG+CGG + chr3_1:54536386-54536405 None:intergenic 45.0%
ACGATATTGGGTTCGATTCC+TGG - chr3_1:54536639-54536658 Msa0362780:CDS 45.0%
!! TCGATTCCTGGTCTTGCATA+TGG - chr3_1:54536651-54536670 Msa0362780:CDS 45.0%
AATCTCCATCGGAGAACCTA+CGG + chr3_1:54536717-54536736 None:intergenic 45.0%
TTGTGAGAAATGTGGTGCAC+TGG - chr3_1:54537174-54537193 Msa0362780:CDS 45.0%
AATACCCTGAGCAGCAGATT+TGG + chr3_1:54537227-54537246 None:intergenic 45.0%
GTTGGAGCCTTCTTCAAATG+AGG + chr3_1:54537283-54537302 None:intergenic 45.0%
AGAAGGCTCCAACATTGTTG+TGG - chr3_1:54537290-54537309 Msa0362780:CDS 45.0%
CCACTCATAACAAATTGCGG+AGG + chr3_1:54537442-54537461 None:intergenic 45.0%
!! CCTCCGCAATTTGTTATGAG+TGG - chr3_1:54537439-54537458 Msa0362780:CDS 45.0%
CCTGAAATGTGACAAACGGT+TGG + chr3_1:54537560-54537579 None:intergenic 45.0%
CCAACCGTTTGTCACATTTC+AGG - chr3_1:54537557-54537576 Msa0362780:CDS 45.0%
AGCAAACCCACTGTACACAA+AGG + chr3_1:54537721-54537740 None:intergenic 45.0%
!! TACAGTGGGTTTGCTGTTGA+TGG - chr3_1:54537726-54537745 Msa0362780:CDS 45.0%
!! TGGTGGACTAGATGAGTCAT+TGG - chr3_1:54537746-54537765 Msa0362780:CDS 45.0%
CAACATTCCCTCAATGCATG+AGG - chr3_1:54537911-54537930 Msa0362780:CDS 45.0%
GAGGTTGCTGCTCTTATTGT+CGG - chr3_1:54537930-54537949 Msa0362780:CDS 45.0%
TGAAAACCATCCTCTCCGTA+TGG + chr3_1:54538074-54538093 None:intergenic 45.0%
CGACCACCAATAAATGAAGC+TGG + chr3_1:54538401-54538420 None:intergenic 45.0%
ATACAGACGCAGAGATTCAG+GGG - chr3_1:54539048-54539067 Msa0362780:CDS 45.0%
AGCGTCGTTCCTTATAATCC+AGG - chr3_1:54539109-54539128 Msa0362780:intron 45.0%
TGCTCGTGATAAGGATAGTG+CGG - chr3_1:54539249-54539268 Msa0362780:CDS 45.0%
AGAGAGGCTTGATGAAGTTG+TGG - chr3_1:54539423-54539442 Msa0362780:CDS 45.0%
GTGGACAGATCTAAGGACAA+AGG - chr3_1:54539442-54539461 Msa0362780:CDS 45.0%
ACCTTTGTTCCTCCTAGATC+TGG - chr3_1:54539613-54539632 Msa0362780:CDS 45.0%
TCCAGATCTAGGAGGAACAA+AGG + chr3_1:54539617-54539636 None:intergenic 45.0%
TGCAAGTTTCCAGATCTAGG+AGG + chr3_1:54539625-54539644 None:intergenic 45.0%
GAGGACATTAAAACGGTTGG+TGG - chr3_1:54539691-54539710 Msa0362780:intron 45.0%
! GAGGTATCAACCTTAGGTTC+TGG - chr3_1:54539796-54539815 Msa0362780:intron 45.0%
TGAGCGACCCATTGTATGTT+TGG - chr3_1:54539866-54539885 Msa0362780:intron 45.0%
GTCTGCTGCCAAACATACAA+TGG + chr3_1:54539877-54539896 None:intergenic 45.0%
TGTATGTTTGGCAGCAGACA+TGG - chr3_1:54539878-54539897 Msa0362780:intron 45.0%
GTATGTTTGGCAGCAGACAT+GGG - chr3_1:54539879-54539898 Msa0362780:intron 45.0%
CTTTGTGTGTATGCCATCTC+TGG - chr3_1:54540163-54540182 Msa0362780:intron 45.0%
! TTCTTTGTTGACGGGTATGG+AGG - chr3_1:54540356-54540375 Msa0362780:intron 45.0%
!! GCATCTTTGTTATTGCCTGG+GGG - chr3_1:54540467-54540486 Msa0362780:intron 45.0%
CGACTTCCCTTAGGAATAAC+TGG + chr3_1:54540758-54540777 None:intergenic 45.0%
! TAAGGGAAGTCGTGCTGATA+CGG - chr3_1:54540766-54540785 Msa0362780:intron 45.0%
ACAATGTGCCTCAGATGATG+TGG - chr3_1:54540862-54540881 Msa0362780:intron 45.0%
GCCTCAGATGATGTGGAAAA+TGG - chr3_1:54540869-54540888 Msa0362780:intron 45.0%
TGCGATGGGCATATTTGCTT+GGG + chr3_1:54541219-54541238 None:intergenic 45.0%
TTGCGATGGGCATATTTGCT+TGG + chr3_1:54541220-54541239 None:intergenic 45.0%
GCAAATATGCCCATCGCAAA+TGG - chr3_1:54541221-54541240 Msa0362780:CDS 45.0%
! TCTGTTTGACGCATTTTGCC+AGG + chr3_1:54541305-54541324 None:intergenic 45.0%
AGGTCTGCAAATGACTGCTT+TGG + chr3_1:54541344-54541363 None:intergenic 45.0%
!! ACGCAGACTGTGTTCTGAAA+AGG + chr3_1:54541364-54541383 None:intergenic 45.0%
CAGCTTCTGTGCACTTACTC+GGG - chr3_1:54535428-54535447 Msa0362780:CDS 50.0%
TTCTGTGCACTTACTCGGGA+TGG - chr3_1:54535432-54535451 Msa0362780:CDS 50.0%
GTACCGTCATTTACCTGAGC+GGG - chr3_1:54535478-54535497 Msa0362780:CDS 50.0%
TCTGGGAACGTCCTGTACAA+AGG + chr3_1:54535519-54535538 None:intergenic 50.0%
ACGACAGAAGACGGATGTCT+GGG + chr3_1:54535536-54535555 None:intergenic 50.0%
AACGACAGAAGACGGATGTC+TGG + chr3_1:54535537-54535556 None:intergenic 50.0%
ACATCCGTCTTCTGTCGTTC+CGG - chr3_1:54535538-54535557 Msa0362780:CDS 50.0%
ACAATGGTCAGCAACTGCGT+AGG + chr3_1:54535566-54535585 None:intergenic 50.0%
CTGAGCGTCCATCAACACAA+TGG + chr3_1:54535582-54535601 None:intergenic 50.0%
! CATTGTGTTGATGGACGCTC+AGG - chr3_1:54535580-54535599 Msa0362780:CDS 50.0%
AGGCGTGGTTATTCACTGCT+TGG - chr3_1:54535600-54535619 Msa0362780:CDS 50.0%
GGCGTGGTTATTCACTGCTT+GGG - chr3_1:54535601-54535620 Msa0362780:CDS 50.0%
GCGTGGTTATTCACTGCTTG+GGG - chr3_1:54535602-54535621 Msa0362780:CDS 50.0%
AGAGCATGACATCATGCTCC+TGG - chr3_1:54535638-54535657 Msa0362780:CDS 50.0%
ACATCATGCTCCTGGCTACA+TGG - chr3_1:54535646-54535665 Msa0362780:CDS 50.0%
ACATACCAAGCCATGTAGCC+AGG + chr3_1:54535659-54535678 None:intergenic 50.0%
CATCAGGTGGGAGAATACGA+GGG + chr3_1:54535694-54535713 None:intergenic 50.0%
TCATCAGGTGGGAGAATACG+AGG + chr3_1:54535695-54535714 None:intergenic 50.0%
CGTATTCTCCCACCTGATGA+AGG - chr3_1:54535695-54535714 Msa0362780:intron 50.0%
GAGGAGATCCTTCATCAGGT+GGG + chr3_1:54535706-54535725 None:intergenic 50.0%
ATGATCTGCTCCATGTTCGC+CGG + chr3_1:54535734-54535753 None:intergenic 50.0%
CATGGAGCAGATCATAGAGG+AGG - chr3_1:54535739-54535758 Msa0362780:intron 50.0%
CTGACACACTGACGATCATC+CGG - chr3_1:54535780-54535799 Msa0362780:intron 50.0%
TGACACACTGACGATCATCC+GGG - chr3_1:54535781-54535800 Msa0362780:intron 50.0%
CAGCTATATGCACCACATCC+CGG + chr3_1:54535802-54535821 None:intergenic 50.0%
AGATTGTCCAGGAGGTGATG+CGG - chr3_1:54535861-54535880 Msa0362780:CDS 50.0%
TAGCGGCAGTTAACAACCAC+TGG - chr3_1:54536286-54536305 Msa0362780:CDS 50.0%
!! TTAACAGCCGCTGGCTTTAG+CGG - chr3_1:54536321-54536340 Msa0362780:CDS 50.0%
TTAACTGCCGCTAAAGCCAG+CGG + chr3_1:54536331-54536350 None:intergenic 50.0%
AACGGATGTTAACTGCCGCT+GGG - chr3_1:54536368-54536387 Msa0362780:CDS 50.0%
ACCTACGGGGCATACAAAGA+GGG + chr3_1:54536702-54536721 None:intergenic 50.0%
AACCTACGGGGCATACAAAG+AGG + chr3_1:54536703-54536722 None:intergenic 50.0%
ATCTCCATCGGAGAACCTAC+GGG + chr3_1:54536716-54536735 None:intergenic 50.0%
AACTCCATGTGCTCAGCCAA+GGG + chr3_1:54536923-54536942 None:intergenic 50.0%
AAACTCCATGTGCTCAGCCA+AGG + chr3_1:54536924-54536943 None:intergenic 50.0%
!! AGAAATGTGGTGCACTGGCT+TGG - chr3_1:54537179-54537198 Msa0362780:CDS 50.0%
!! TTGGATTGGCGAGATCGACA+AGG - chr3_1:54537198-54537217 Msa0362780:CDS 50.0%
GCTTCCAAATCTGCTGCTCA+GGG - chr3_1:54537220-54537239 Msa0362780:CDS 50.0%
ACCAAGTCAAACGACGGTGT+TGG - chr3_1:54537415-54537434 Msa0362780:CDS 50.0%
CCAAGTCAAACGACGGTGTT+GGG - chr3_1:54537416-54537435 Msa0362780:CDS 50.0%
!! AGTGGGTTTGCTGTTGATGG+TGG - chr3_1:54537729-54537748 Msa0362780:CDS 50.0%
GCAGCAACCTCATGCATTGA+GGG + chr3_1:54537921-54537940 None:intergenic 50.0%
AGCAGCAACCTCATGCATTG+AGG + chr3_1:54537922-54537941 None:intergenic 50.0%
CACGGAATGGCCAACTACAA+AGG - chr3_1:54537997-54538016 Msa0362780:CDS 50.0%
ATTGAGGAAGCAGTGAGTCG+TGG - chr3_1:54538335-54538354 Msa0362780:CDS 50.0%
AGCCAGCTTCTATAGGATCG+CGG - chr3_1:54538366-54538385 Msa0362780:CDS 50.0%
AGCGGGATGCATAAGTTACG+AGG - chr3_1:54539672-54539691 Msa0362780:intron 50.0%
! CGAGAAGCATGTGGTGCATT+AGG - chr3_1:54539733-54539752 Msa0362780:intron 50.0%
GTATCAGCACGACTTCCCTT+AGG + chr3_1:54540767-54540786 None:intergenic 50.0%
! TGGCAAACGTCCTTTTGCCA+AGG + chr3_1:54541174-54541193 None:intergenic 50.0%
TTGGCAAAAGGACGTTTGCC+AGG - chr3_1:54541173-54541192 Msa0362780:intron 50.0%
TTTGCTTGGGATTCTGCTCC+TGG + chr3_1:54541206-54541225 None:intergenic 50.0%
CTGGCATGTCCATTTGCGAT+GGG + chr3_1:54541233-54541252 None:intergenic 50.0%
CATCGCAAATGGACATGCCA+GGG - chr3_1:54541232-54541251 Msa0362780:CDS 50.0%
! TTTTGCCAGGAGTTGTGCCA+GGG + chr3_1:54541292-54541311 None:intergenic 50.0%
! ATTTTGCCAGGAGTTGTGCC+AGG + chr3_1:54541293-54541312 None:intergenic 50.0%
GATCCAGGCGTAAGCGGTAA+TGG + chr3_1:54535345-54535364 None:intergenic 55.0%
TACTCGGGATGGCTCATGTG+CGG - chr3_1:54535443-54535462 Msa0362780:CDS 55.0%
GCTCATGTGCGGGAAGAACA+GGG - chr3_1:54535454-54535473 Msa0362780:CDS 55.0%
AACTGCCTCTTTACCCGCTC+AGG + chr3_1:54535494-54535513 None:intergenic 55.0%
ATGCTCCTGGCTACATGGCT+TGG - chr3_1:54535651-54535670 Msa0362780:CDS 55.0%
GGAGGAGATCCTTCATCAGG+TGG + chr3_1:54535707-54535726 None:intergenic 55.0%
CTGGGAGGAGATCCTTCATC+AGG + chr3_1:54535710-54535729 None:intergenic 55.0%
CTGATGAAGGATCTCCTCCC+AGG - chr3_1:54535708-54535727 Msa0362780:intron 55.0%
! TCATAGAGGAGGAGCATGCC+AGG - chr3_1:54535750-54535769 Msa0362780:intron 55.0%
CAGTGTGTCAGGCATCTACC+TGG + chr3_1:54535771-54535790 None:intergenic 55.0%
CGGATGATCGTCAGTGTGTC+AGG + chr3_1:54535782-54535801 None:intergenic 55.0%
ACTGACGATCATCCGGGATG+TGG - chr3_1:54535787-54535806 Msa0362780:intron 55.0%
TAGCTATCCGCATCACCTCC+TGG + chr3_1:54535871-54535890 None:intergenic 55.0%
! CAGAGGCATGGTAGGCAACA+TGG - chr3_1:54535941-54535960 Msa0362780:CDS 55.0%
GTTAACTGCCGCTACGTGTC+TGG + chr3_1:54536280-54536299 None:intergenic 55.0%
TTAACTGCCGCTGCATCCAG+TGG + chr3_1:54536305-54536324 None:intergenic 55.0%
! ACATCCGTTGGTCTAACCGG+CGG + chr3_1:54536357-54536376 None:intergenic 55.0%
CAGCGGCAGTTAACATCCGT+TGG + chr3_1:54536369-54536388 None:intergenic 55.0%
CAACGGATGTTAACTGCCGC+TGG - chr3_1:54536367-54536386 Msa0362780:CDS 55.0%
ACGGATGTTAACTGCCGCTG+GGG - chr3_1:54536369-54536388 Msa0362780:CDS 55.0%
ACCCTCTTTGTATGCCCCGT+AGG - chr3_1:54536698-54536717 Msa0362780:CDS 55.0%
TCTCCATCGGAGAACCTACG+GGG + chr3_1:54536715-54536734 None:intergenic 55.0%
!! AGAGGCATTGTCCGATCCCT+TGG - chr3_1:54536904-54536923 Msa0362780:CDS 55.0%
CATGTGCTCAGCCAAGGGAT+CGG + chr3_1:54536918-54536937 None:intergenic 55.0%
!! TGTGGTGCACTGGCTTGGAT+TGG - chr3_1:54537184-54537203 Msa0362780:CDS 55.0%
GGCTTCCAAATCTGCTGCTC+AGG - chr3_1:54537219-54537238 Msa0362780:CDS 55.0%
CCCAACACCGTCGTTTGACT+TGG + chr3_1:54537419-54537438 None:intergenic 55.0%
GCCAGCTTCTATAGGATCGC+GGG - chr3_1:54538367-54538386 Msa0362780:CDS 55.0%
ACCCGCGATCCTATAGAAGC+TGG + chr3_1:54538371-54538390 None:intergenic 55.0%
ATGCGCAGAGCTACCGAACA+AGG - chr3_1:54538862-54538881 Msa0362780:CDS 55.0%
! GTTGACGGGTATGGAGGTAC+TGG - chr3_1:54540362-54540381 Msa0362780:intron 55.0%
GAATGTGCAGTTCTACCCCC+AGG + chr3_1:54540485-54540504 None:intergenic 55.0%
CCTGGCATGTCCATTTGCGA+TGG + chr3_1:54541234-54541253 None:intergenic 55.0%
CCATCGCAAATGGACATGCC+AGG - chr3_1:54541231-54541250 Msa0362780:CDS 55.0%
TTTGCCAGGAGCTAAAGCCC+TGG + chr3_1:54541252-54541271 None:intergenic 55.0%
AAAGACCCTGGCACAACTCC+TGG - chr3_1:54541284-54541303 Msa0362780:CDS 55.0%
AAGATGTCAGGCGCTTTGCC+AGG - chr3_1:54541403-54541422 Msa0362780:CDS 55.0%
AGATGTCAGGCGCTTTGCCA+GGG - chr3_1:54541404-54541423 Msa0362780:CDS 55.0%
ATTTGCCAGGGGTTAACCCC+TGG + chr3_1:54541424-54541443 None:intergenic 55.0%
GCACCATTACCGCTTACGCC+TGG - chr3_1:54535339-54535358 Msa0362780:CDS 60.0%
CCAAGCGATCCAGGCGTAAG+CGG + chr3_1:54535351-54535370 None:intergenic 60.0%
CTTACGCCTGGATCGCTTGG+AGG - chr3_1:54535351-54535370 Msa0362780:CDS 60.0%
CATCCACCTCCAAGCGATCC+AGG + chr3_1:54535360-54535379 None:intergenic 60.0%
GCTTGGAGGTGGATGACGTC+AGG - chr3_1:54535365-54535384 Msa0362780:CDS 60.0%
ACTCGGGATGGCTCATGTGC+GGG - chr3_1:54535444-54535463 Msa0362780:CDS 60.0%
GGCTCATGTGCGGGAAGAAC+AGG - chr3_1:54535453-54535472 Msa0362780:CDS 60.0%
! GGCACCGGAACGACAGAAGA+CGG + chr3_1:54535545-54535564 None:intergenic 60.0%
GTCAGCAACTGCGTAGGCAC+CGG + chr3_1:54535560-54535579 None:intergenic 60.0%
! TGTTGATGGACGCTCAGGCG+TGG - chr3_1:54535585-54535604 Msa0362780:CDS 60.0%
TGAAGGATCTCCTCCCAGGC+CGG - chr3_1:54535712-54535731 Msa0362780:intron 60.0%
TAGCGGCAGTTAACAGCCGC+CGG - chr3_1:54536338-54536357 Msa0362780:CDS 60.0%
! ACAGCCGCCGGTTAGACCAA+CGG - chr3_1:54536350-54536369 Msa0362780:CDS 60.0%
CGGATGTTAACTGCCGCTGG+GGG - chr3_1:54536370-54536389 Msa0362780:CDS 60.0%
!! AACTGCCGCTGGGGGCATTT+AGG - chr3_1:54536378-54536397 Msa0362780:CDS 60.0%
ATGCCCCGTAGGTTCTCCGA+TGG - chr3_1:54536709-54536728 Msa0362780:CDS 60.0%
CGATCCCTTGGCTGAGCACA+TGG - chr3_1:54536916-54536935 Msa0362780:CDS 60.0%
GAATGGAAACCTCGCGAGCG+AGG - chr3_1:54539571-54539590 Msa0362780:CDS 60.0%
TTTGACAGGGCTTCTGCCCC+TGG + chr3_1:54541141-54541160 None:intergenic 60.0%
CGTTTGCCAGGAGCTTTGCC+AGG - chr3_1:54541185-54541204 Msa0362780:intron 60.0%
TCTGCTCCTGGCAAAGCTCC+TGG + chr3_1:54541194-54541213 None:intergenic 60.0%
! CATGCCAGGGCTTTAGCTCC+TGG - chr3_1:54541245-54541264 Msa0362780:CDS 60.0%
TTGCCAGGAGCGACTTTGCC+AGG + chr3_1:54541266-54541285 None:intergenic 60.0%
GTTGTGCCAGGGTCTTTGCC+AGG + chr3_1:54541281-54541300 None:intergenic 60.0%
GATGTCAGGCGCTTTGCCAG+GGG - chr3_1:54541405-54541424 Msa0362780:CDS 60.0%
CTTTGCCAGGGGTTAACCCC+TGG - chr3_1:54541416-54541435 Msa0362780:CDS 60.0%
CCGCTTACGCCTGGATCGCT+TGG - chr3_1:54535348-54535367 Msa0362780:CDS 65.0%
ACGCCTGGATCGCTTGGAGG+TGG - chr3_1:54535354-54535373 Msa0362780:CDS 65.0%
TGCTCCATGTTCGCCGGCCT+GGG + chr3_1:54535728-54535747 None:intergenic 65.0%
ATCAGATTGCCAGGCCGCGC+AGG - chr3_1:54535915-54535934 Msa0362780:CDS 65.0%
TCAGATTGCCAGGCCGCGCA+GGG - chr3_1:54535916-54535935 Msa0362780:CDS 65.0%
CAGCGGCAGTTAACAGCCGC+TGG - chr3_1:54536312-54536331 Msa0362780:CDS 65.0%
GCTCCTGGCAAAGTCGCTCC+TGG - chr3_1:54541260-54541279 Msa0362780:CDS 65.0%
GTCGCTCCTGGCAAAGACCC+TGG - chr3_1:54541272-54541291 Msa0362780:CDS 65.0%
TCCTCCCAGGCCGGCGAACA+TGG - chr3_1:54535721-54535740 Msa0362780:intron 70.0%
TCCATGTTCGCCGGCCTGGG+AGG + chr3_1:54535725-54535744 None:intergenic 70.0%
CTGCTCCATGTTCGCCGGCC+TGG + chr3_1:54535729-54535748 None:intergenic 70.0%
CAGATTGCCAGGCCGCGCAG+GGG - chr3_1:54535917-54535936 Msa0362780:CDS 70.0%
AGATTGCCAGGCCGCGCAGG+GGG - chr3_1:54535918-54535937 Msa0362780:CDS 70.0%
! GCAGGGGGCAGAGGCATGGT+AGG - chr3_1:54535933-54535952 Msa0362780:CDS 70.0%
! ATTGACGGGCCTCGCTCGCG+AGG + chr3_1:54539583-54539602 None:intergenic 70.0%
CGCGAGCGAGGCCCGTCAAT+TGG - chr3_1:54539583-54539602 Msa0362780:CDS 70.0%
CCATGCCTCTGCCCCCTGCG+CGG + chr3_1:54535932-54535951 None:intergenic 75.0%
! CCGCGCAGGGGGCAGAGGCA+TGG - chr3_1:54535929-54535948 Msa0362780:CDS 80.0%
! CCTCTGCCCCCTGCGCGGCC+TGG + chr3_1:54535927-54535946 None:intergenic 85.0%
! CCAGGCCGCGCAGGGGGCAG+AGG - chr3_1:54535924-54535943 Msa0362780:CDS 85.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 54535335 54541487 54535335 ID=Msa0362780;Name=Msa0362780
chr3_1 mRNA 54535335 54541487 54535335 ID=Msa0362780-mRNA-1;Parent=Msa0362780;Name=Msa0362780-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|0.25|1|1|8|0|1424
chr3_1 exon 54541192 54541487 54541192 ID=Msa0362780-mRNA-1:exon:9898;Parent=Msa0362780-mRNA-1
chr3_1 exon 54541051 54541092 54541051 ID=Msa0362780-mRNA-1:exon:9897;Parent=Msa0362780-mRNA-1
chr3_1 exon 54540872 54540984 54540872 ID=Msa0362780-mRNA-1:exon:9896;Parent=Msa0362780-mRNA-1
chr3_1 exon 54539244 54539679 54539244 ID=Msa0362780-mRNA-1:exon:9895;Parent=Msa0362780-mRNA-1
chr3_1 exon 54538163 54539091 54538163 ID=Msa0362780-mRNA-1:exon:9894;Parent=Msa0362780-mRNA-1
chr3_1 exon 54536888 54538069 54536888 ID=Msa0362780-mRNA-1:exon:9893;Parent=Msa0362780-mRNA-1
chr3_1 exon 54535817 54536747 54535817 ID=Msa0362780-mRNA-1:exon:9892;Parent=Msa0362780-mRNA-1
chr3_1 exon 54535335 54535680 54535335 ID=Msa0362780-mRNA-1:exon:9891;Parent=Msa0362780-mRNA-1
chr3_1 CDS 54541192 54541487 54541192 ID=Msa0362780-mRNA-1:cds;Parent=Msa0362780-mRNA-1
chr3_1 CDS 54541051 54541092 54541051 ID=Msa0362780-mRNA-1:cds;Parent=Msa0362780-mRNA-1
chr3_1 CDS 54540872 54540984 54540872 ID=Msa0362780-mRNA-1:cds;Parent=Msa0362780-mRNA-1
chr3_1 CDS 54539244 54539679 54539244 ID=Msa0362780-mRNA-1:cds;Parent=Msa0362780-mRNA-1
chr3_1 CDS 54538163 54539091 54538163 ID=Msa0362780-mRNA-1:cds;Parent=Msa0362780-mRNA-1
chr3_1 CDS 54536888 54538069 54536888 ID=Msa0362780-mRNA-1:cds;Parent=Msa0362780-mRNA-1
chr3_1 CDS 54535817 54536747 54535817 ID=Msa0362780-mRNA-1:cds;Parent=Msa0362780-mRNA-1
chr3_1 CDS 54535335 54535680 54535335 ID=Msa0362780-mRNA-1:cds;Parent=Msa0362780-mRNA-1
Gene Sequence

>Msa0362780

ATGTGCACCATTACCGCTTACGCCTGGATCGCTTGGAGGTGGATGACGTCAGGTTTTTCTACTTATGGTGATCACAGAGACGTGCATCCATTTCAGCTTCTGTGCACTTACTCGGGATGGCTCATGTGCGGGAAGAACAGGGTGTACCGTCATTTACCTGAGCGGGTAAAGAGGCAGTTATCCTTTGTACAGGACGTTCCCAGACATCCGTCTTCTGTCGTTCCGGTGCCTACGCAGTTGCTGACCATTGTGTTGATGGACGCTCAGGCGTGGTTATTCACTGCTTGGGGAGATGGGCCGGCGAACATGGAGCAGATCATAGAGGAGGAGCATGCCAGGCAATCCGAGATTACTAAAGAGGAGATTGTCCAGGAGGTGATGCGGATAGCTAGTACTAGTCGCCCTGCTCTTACTTATCAGATTGCCAGGCCGCGCAGGGGGCAGAGGCATGTTTATTCGGATATTGGTGATATGAATATTGTTTGTGAGAAATGTGGTGCACTGGCTTGGATTGGCGAGATCGACAAGGCTTCCAAATCTGCTGCTCAGGGTATTTCTATATGTTGCATGAAAGGAAAAGTCACAATACCTCATTTGAAGAAGGCTCCAACATTGTTGTGGAATTTAATCAATGGTTATGATGAAAGGAGTGCTCATTTCCTTAAACATATACGATCATATAACAACATGTTTGCATTCACATCTCTTGGGGGTAATATAGAAACCAAGTCAAACGACGGTGTTGGGCCTCCGCAATTTGTTATGAGTGGTCAGAATTATCATCGCATTGGTAGTTTGTTGCCAATAGGAACATATATGCCCAAATTTTCTCAGTTGTATATATATGATACAAGCAATGAAGTTGCCAACCGTTTGTCACATTTCAGTGGGTTTGCTGTTGATGGTGGACTAGATGAGTCATTGGTGAATCAATTATTAGCAATGGTTGATGAGAACAATGTAGTGGCAAAGTCTTTTAGACGTGTGAGGGATCGTTTAGAGCAAACACAAAATGTTGAAGTTGCCTTACGTCTTTTTAGACATCGTTCTACTAATGAACGAACAAACAACATTCCCTCAATGCATGAGGTTGCTGCTCTTATTGTCGGAGATTTTGATTACTCTGATACTGGTAAAGACATAATTTTGCATTCACGGAATGGCCAACTACAAAGGATACCTGAAACTCATGCCAATTACATGCCTTTGCAATATCCGTTGTTATTTCCATACGGAGAGGATGGTTTTCATGAAAAAATTCCTTTGAGCACATGTTATTGGGACTCATCCACTAGAAAAAGAGTTCGTGTGTCTTTGAGAGAATTCATTGCTTTTCGGATTCAAGAAAGACATATTGAACATTCTATTATTCTTAAAAGTCGACGATTGTTTCAACAATTTATTGTGGACTCTTATTCAATGATTGAATCACAGAGGTTGTCGTTCATCAGAAACAATCAAGGAAAAATCAGATCTGAGTTTTTGAGTGGAATTGAGGAAGCAGTGAGTCGTGGAGATATGAAGCCAGCTTCTATAGGATCGCGGGTTGTATTGCCAGCTTCATTTATTGGTGGTCGAAGATACGTGTTTAACAATTGTCAAGATGCAATGGCCATATGTAAGAGATTTGGGTATCCAGATTTATTCTTGACAATGACATGTAACCCAAATTGGTTAGAAATTCAACGTTTCCTTCATGACAAAGACATGTGTGTAAATGATCGTCCAGATATTGCATGTAGAGTTTTTCGGTTGAAGTTAAATGATATGATGGCTGACTTCAAAAAGGGAATTTTTTTTGGAAAAGTGATAGCAAGCATGTATACGATTGAATTTCAAAAGAGGGGGTTACCGCATGCACACATATTATTGTGGTTGGATGCAAGTGATAAGTTGAATACTGTGAGTTTGGTAGACTCATTGATATGCGCAGAGCTACCGAACAAGGATTTGTTTCCAAAGTTGTACTCTGCTGTTAGTAATTTTATGATACATGGACCATGTGGTGCTAGTCATCAAAATTCACCTTGCATGAAAAATGGTAGATGCTCAAAATTTTACCCAAAAAAATTTGCAGCACGAGTGTCATTTGATGAAAAAGGGTATCCAATATACAGACGCAGAGATTCAGGGGACATTATTATGAAGAAGGACACTAAATTGGATAATAGAAGCGTCGTTCCTTATAATCCAGGTTTATTAATGAAGTATCAAGCTCACATTAACATTGAGTACTGTAACAAGTCTAACAGTATAGCATATTTATTTAAGCATATTAATAAAGGAGTTGACAGGGTGACGATGTTAGCTAATGCTCGTGATAAGGATAGTGCGGATGAGATAAATCAATATTATAATTGCCGATATTTATCACCTTGTGAGTCTGTTTGGAGAATTTTTGCCTTTGATATTCATCGTCGATGGCCTTCAGTTCAACGACTCACTTTTCATCTCCCGAGACAACAAAGTGTCATTTTCAATGATTCAGAGAGGCTTGATGAAGTTGTGGACAGATCTAAGGACAAAGGAACAATGTTTCTTAGTTGGATGGAAGCAAATAAGAAATATACCGAGGGTAGGCAATTAACTTATGCTGAGTTTCCCATGTTTTTTGTTTACTCACCAGATGAAATGGAATGGAAACCTCGCGAGCGAGGCCCGTCAATTGGAAGATTGACCTTTGTTCCTCCTAGATCTGGAAACTTGCATTATTTGAGATTGTTGCTAAATGTTCAAGCGGGATGCATAAGTTACGAGGACATTAAAACGGTTGGTGGTCGTATTTATGATACTTTTCGAGAAGCATGTGGTGCATTAGGTATGTTGGCAGATGATCAAGAATTTATTGATGGTGTTAAGGAGGTATCAACCTTAGGTTCTGGATTTCATTCTAGGAAACTCTTTGCTACTTTGTTGTCGACAAGTTCATTGAGCGACCCATTGTATGTTTGGCAGCAGACATGGGAAATCTTATCAGATGGGATTATGTATGAAAAAGATTTGATAACTTCTCCCGAAAGTGTTAAAAACTCATGTTTGGTTGAGATCGAAAAGCTTTTGCGTTTGAATGGGAAAACATTAAAGGACTTTGTGTGTATGCCATCTCTGGATTTTTCTGAATTAGGTGAGTTTGAAAATATTTTACTCGCGAGTGAATTAATGTATGATAAGGTTGAGATGCTCGCCAAGCATAAAGAATATTATGCAAACTTGAACTTTGCTCAGAAGGCAGCCTATGATTGTATTGTCAATGCTGTTAATGGAAAATTAGGTGGTTTTTTCTTTGTTGACGGGTATGGAGGTACTGGTAAAACTTATTTATGGAGAGCTTTGTCCTTTAGATTTCGTTCAGAAAGTAAGGTTGTTCTTAATGTTGCATCCAGTGGCATTGCATCTTTGTTATTGCCTGGGGGTAGAACTGCACATTCTCAATTTGAGATACCATTAGTGTTGAATGAGAGTTCGTGTTGCAATATAAAACAAGGAAGTATGAAGGCAGAACTGTTACAAAGAACAAGTCTGATCATTTGGGATGAAGCTCCAATGATCAATAAATGGGCCTTAGAAGCATTGGACAGAACATTAAGGGATATTATGAGATTTGATTGTGCAAATAGTATGGATCAACCTTTTGGTGGAAAAACTATTGTTTTGGGTGGCGATTTTCGACAAATTTTACCAGTTATTCCTAAGGGAAGTCGTGCTGATACGGTTCATGCAACTATCAACTCATCTCGGTTATGGCATCATTGCATAATTTTCAAACTAACCGAAAATATGAGGTTACAATGTGCCTCAGATGATGTGGAAAATGGAAACATCAAAGAGTTTGCCAAGTGGATTTTAAACTTAGGTGATGGAAAATTAGGTGAAGAAGATGATGATGGTGATGCAACTGTTGAAATGCTTCAAGATATATTAATTCAAAGGGGCAGAAGCCCTGTCAAAATGCAAAAAGCCTTGGCAAAAGGACGTTTGCCAGGAGCTTTGCCAGGAGCAGAATCCCAAGCAAATATGCCCATCGCAAATGGACATGCCAGGGCTTTAGCTCCTGGCAAAGTCGCTCCTGGCAAAGACCCTGGCACAACTCCTGGCAAAATGCGTCAAACAGAACACAGACTTTTCTGTCCAAAGCAGTCATTTGCAGACCTTTTCAGAACACAGTCTGCGTCATGTCAATCATTTTCAGAAAGATGTCAGGCGCTTTGCCAGGGGTTAACCCCTGGCAAATTGTGTACGAATTTTATAAAAAAAGAACGTTTTTATTTGTTATAA
Protein sequence

>Msa0362780

MCTITAYAWIAWRWMTSGFSTYGDHRDVHPFQLLCTYSGWLMCGKNRVYRHLPERVKRQLSFVQDVPRHPSSVVPVPTQLLTIVLMDAQAWLFTAWGDGPANMEQIIEEEHARQSEITKEEIVQEVMRIASTSRPALTYQIARPRRGQRHVYSDIGDMNIVCEKCGALAWIGEIDKASKSAAQGISICCMKGKVTIPHLKKAPTLLWNLINGYDERSAHFLKHIRSYNNMFAFTSLGGNIETKSNDGVGPPQFVMSGQNYHRIGSLLPIGTYMPKFSQLYIYDTSNEVANRLSHFSGFAVDGGLDESLVNQLLAMVDENNVVAKSFRRVRDRLEQTQNVEVALRLFRHRSTNERTNNIPSMHEVAALIVGDFDYSDTGKDIILHSRNGQLQRIPETHANYMPLQYPLLFPYGEDGFHEKIPLSTCYWDSSTRKRVRVSLREFIAFRIQERHIEHSIILKSRRLFQQFIVDSYSMIESQRLSFIRNNQGKIRSEFLSGIEEAVSRGDMKPASIGSRVVLPASFIGGRRYVFNNCQDAMAICKRFGYPDLFLTMTCNPNWLEIQRFLHDKDMCVNDRPDIACRVFRLKLNDMMADFKKGIFFGKVIASMYTIEFQKRGLPHAHILLWLDASDKLNTVSLVDSLICAELPNKDLFPKLYSAVSNFMIHGPCGASHQNSPCMKNGRCSKFYPKKFAARVSFDEKGYPIYRRRDSGDIIMKKDTKLDNRSVVPYNPGLLMKYQAHINIEYCNKSNSIAYLFKHINKGVDRVTMLANARDKDSADEINQYYNCRYLSPCESVWRIFAFDIHRRWPSVQRLTFHLPRQQSVIFNDSERLDEVVDRSKDKGTMFLSWMEANKKYTEGRQLTYAEFPMFFVYSPDEMEWKPRERGPSIGRLTFVPPRSGNLHYLRLLLNVQAGCISYEDIKTVGGRIYDTFREACGALGMLADDQEFIDGVKEVSTLGSGFHSRKLFATLLSTSSLSDPLYVWQQTWEILSDGIMYEKDLITSPESVKNSCLVEIEKLLRLNGKTLKDFVCMPSLDFSELGEFENILLASELMYDKVEMLAKHKEYYANLNFAQKAAYDCIVNAVNGKLGGFFFVDGYGGTGKTYLWRALSFRFRSESKVVLNVASSGIASLLLPGGRTAHSQFEIPLVLNESSCCNIKQGSMKAELLQRTSLIIWDEAPMINKWALEALDRTLRDIMRFDCANSMDQPFGGKTIVLGGDFRQILPVIPKGSRADTVHATINSSRLWHHCIIFKLTENMRLQCASDDVENGNIKEFAKWILNLGDGKLGEEDDDGDATVEMLQDILIQRGRSPVKMQKALAKGRLPGALPGAESQANMPIANGHARALAPGKVAPGKDPGTTPGKMRQTEHRLFCPKQSFADLFRTQSASCQSFSERCQALCQGLTPGKLCTNFIKKERFYLL*