AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1049010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1049010 MtrunA17_Chr7g0217741 95.527 313 10 2 1 313 1 309 0.0 610
Msa1049010 MtrunA17_Chr6g0453471 60.800 375 67 11 1 313 1 357 5.51e-128 369
Msa1049010 MtrunA17_Chr4g0042671 79.661 177 32 2 1 173 1 177 2.59e-100 300
Msa1049010 MtrunA17_Chr8g0349261 64.481 183 62 3 1 180 1 183 6.72e-79 242
Msa1049010 MtrunA17_Chr2g0281071 76.923 130 29 1 1 129 1 130 7.90e-76 236
Msa1049010 MtrunA17_Chr4g0048511 75.373 134 32 1 1 133 1 134 1.69e-75 235
Msa1049010 MtrunA17_Chr3g0115821 60.335 179 65 2 1 173 1 179 3.58e-75 234
Msa1049010 MtrunA17_Chr4g0039971 56.842 190 71 2 1 181 2 189 4.82e-73 229
Msa1049010 MtrunA17_Chr2g0323411 71.642 134 38 0 1 134 1 134 6.04e-72 225
Msa1049010 MtrunA17_Chr1g0203411 62.722 169 56 2 1 168 1 163 7.68e-71 221
Msa1049010 MtrunA17_Chr5g0410961 66.207 145 45 1 1 145 1 141 1.06e-69 220
Msa1049010 MtrunA17_Chr5g0417821 61.184 152 55 1 10 161 5 152 1.58e-66 210
Msa1049010 MtrunA17_Chr4g0057031 68.702 131 41 0 1 131 1 131 2.29e-66 209
Msa1049010 MtrunA17_Chr5g0395281 53.886 193 79 3 1 183 1 193 2.64e-66 210
Msa1049010 MtrunA17_Chr4g0037141 58.750 160 62 1 1 160 1 156 1.19e-65 207
Msa1049010 MtrunA17_Chr5g0434571 71.094 128 37 0 1 128 37 164 9.33e-65 207
Msa1049010 MtrunA17_Chr3g0110351 71.654 127 36 0 1 127 1 127 1.25e-64 206
Msa1049010 MtrunA17_Chr3g0131121 63.571 140 46 1 1 135 1 140 2.91e-62 199
Msa1049010 MtrunA17_Chr3g0103281 68.750 128 40 0 1 128 1 128 3.39e-62 200
Msa1049010 MtrunA17_Chr6g0452271 50.270 185 83 2 1 177 1 184 4.31e-62 200
Msa1049010 MtrunA17_Chr7g0217221 51.485 202 87 5 1 201 1 192 6.90e-62 197
Msa1049010 MtrunA17_Chr1g0193371 68.939 132 41 0 1 132 1 132 1.02e-61 200
Msa1049010 MtrunA17_Chr7g0228891 61.806 144 55 0 1 144 1 144 3.32e-61 196
Msa1049010 MtrunA17_Chr1g0193801 63.699 146 50 1 1 146 1 143 4.34e-61 199
Msa1049010 MtrunA17_Chr8g0385321 65.625 128 44 0 1 128 1 128 4.52e-61 197
Msa1049010 MtrunA17_Chr7g0274581 66.949 118 39 0 1 118 1 118 5.96e-61 193
Msa1049010 MtrunA17_Chr1g0187761 70.339 118 35 0 1 118 1 118 1.98e-60 193
Msa1049010 MtrunA17_Chr7g0254411 68.800 125 37 1 1 123 1 125 3.04e-60 195
Msa1049010 MtrunA17_Chr5g0435101 65.600 125 43 0 3 127 2 126 3.31e-60 191
Msa1049010 MtrunA17_Chr7g0261281 71.552 116 33 0 1 116 1 116 3.32e-60 193
Msa1049010 MtrunA17_Chr4g0060721 53.143 175 71 3 1 175 2 165 4.37e-60 195
Msa1049010 MtrunA17_Chr7g0270891 65.909 132 45 0 1 132 1 132 4.73e-60 196
Msa1049010 MtrunA17_Chr3g0121241 67.742 124 40 0 5 128 35 158 7.75e-60 193
Msa1049010 MtrunA17_Chr3g0092401 55.422 166 62 3 1 166 2 155 8.48e-60 193
Msa1049010 MtrunA17_Chr1g0211161 47.556 225 103 3 3 212 4 228 8.54e-60 191
Msa1049010 MtrunA17_Chr1g0167691 72.414 116 32 0 1 116 1 116 1.33e-59 191
Msa1049010 MtrunA17_Chr1g0167661 73.276 116 31 0 1 116 1 116 1.81e-59 191
Msa1049010 MtrunA17_Chr4g0058631 63.971 136 49 0 1 136 1 136 4.80e-59 193
Msa1049010 MtrunA17_Chr4g0068061 70.690 116 34 0 1 116 1 116 1.67e-58 191
Msa1049010 MtrunA17_Chr7g0275911 69.828 116 35 0 1 116 1 116 5.04e-58 187
Msa1049010 MtrunA17_Chr8g0346561 68.644 118 37 0 1 118 1 118 1.05e-57 187
Msa1049010 MtrunA17_Chr7g0271241 67.939 131 42 0 1 131 1 131 2.07e-57 189
Msa1049010 MtrunA17_Chr3g0117091 51.955 179 72 1 1 165 1 179 3.14e-57 188
Msa1049010 MtrunA17_Chr4g0070611 44.403 268 117 9 1 267 1 237 7.43e-55 181
Msa1049010 MtrunA17_Chr7g0247131 67.742 124 39 1 44 166 10 133 8.62e-55 179
Msa1049010 MtrunA17_Chr2g0309911 59.259 135 50 1 6 140 5 134 1.04e-54 180
Msa1049010 MtrunA17_Chr4g0070641 67.227 119 39 0 1 119 1 119 1.17e-54 176
Msa1049010 MtrunA17_Chr1g0194951 62.791 129 48 0 1 129 1 129 2.59e-54 181
Msa1049010 MtrunA17_Chr6g0453211 68.468 111 35 0 1 111 1 111 7.03e-54 178
Msa1049010 MtrunA17_Chr2g0311221 64.545 110 39 0 2 111 4 113 1.22e-52 176
Msa1049010 MtrunA17_Chr4g0044421 62.400 125 46 1 3 126 2 126 1.72e-52 171
Msa1049010 MtrunA17_Chr2g0323351 66.102 118 40 0 1 118 1 118 1.80e-52 172
Msa1049010 MtrunA17_Chr7g0264641 56.757 148 60 3 1 145 1 147 2.02e-52 173
Msa1049010 MtrunA17_Chr4g0042611 85.227 88 13 0 1 88 1 88 3.79e-52 166
Msa1049010 MtrunA17_Chr4g0028311 60.769 130 50 1 1 129 1 130 4.31e-52 174
Msa1049010 MtrunA17_Chr3g0135311 55.944 143 62 1 1 142 1 143 5.27e-51 172
Msa1049010 MtrunA17_Chr2g0330041 49.080 163 73 2 1 153 1 163 6.62e-51 173
Msa1049010 MtrunA17_Chr8g0387421 60.169 118 47 0 1 118 1 118 9.56e-51 170
Msa1049010 MtrunA17_Chr8g0342521 59.350 123 50 0 1 123 1 123 3.56e-50 169
Msa1049010 MtrunA17_Chr1g0151941 53.571 140 63 2 1 139 1 139 3.89e-50 167
Msa1049010 MtrunA17_Chr1g0152011 64.103 117 41 1 1 116 1 117 4.03e-50 169
Msa1049010 MtrunA17_Chr5g0400821 64.103 117 41 1 1 116 1 117 4.27e-50 168
Msa1049010 MtrunA17_Chr4g0022931 62.393 117 43 1 1 116 1 117 6.20e-50 167
Msa1049010 MtrunA17_Chr8g0342541 58.537 123 51 0 1 123 1 123 1.05e-49 168
Msa1049010 MtrunA17_Chr7g0269831 68.103 116 37 0 1 116 1 116 1.22e-49 168
Msa1049010 MtrunA17_Chr2g0327351 66.667 111 36 1 1 110 1 111 4.13e-49 166
Msa1049010 MtrunA17_Chr4g0022911 60.345 116 45 1 1 115 1 116 7.12e-49 164
Msa1049010 MtrunA17_Chr4g0022901 62.069 116 43 1 1 115 1 116 1.08e-48 164
Msa1049010 MtrunA17_Chr5g0397231 61.818 110 42 0 1 110 1 110 5.45e-48 164
Msa1049010 MtrunA17_Chr1g0203441 67.925 106 34 0 13 118 14 119 9.18e-48 161
Msa1049010 MtrunA17_Chr4g0032401 63.063 111 41 0 12 122 17 127 2.57e-47 162
Msa1049010 MtrunA17_Chr2g0328771 63.889 108 39 0 12 119 20 127 2.82e-47 161
Msa1049010 MtrunA17_Chr4g0022881 60.526 114 45 0 1 114 1 114 7.49e-47 157
Msa1049010 MtrunA17_Chr4g0054391 60.909 110 42 1 1 109 1 110 1.31e-45 156
Msa1049010 MtrunA17_Chr3g0088461 64.815 108 38 0 9 116 19 126 2.28e-45 157
Msa1049010 MtrunA17_Chr4g0072751 62.162 111 41 1 1 110 1 111 4.01e-45 156
Msa1049010 MtrunA17_Chr4g0022891 58.407 113 47 0 1 113 1 113 1.16e-44 152
Msa1049010 MtrunA17_Chr8g0342481 52.174 138 64 2 1 137 1 137 1.75e-44 156
Msa1049010 MtrunA17_Chr6g0487491 55.556 126 47 2 1 117 1 126 4.62e-44 151
Msa1049010 MtrunA17_Chr4g0055981 53.571 140 64 1 9 148 52 190 6.54e-44 150
Msa1049010 MtrunA17_Chr1g0186061 64.078 103 37 0 13 115 21 123 1.97e-43 149
Msa1049010 MtrunA17_Chr6g0470971 59.821 112 45 0 7 118 9 120 5.41e-43 149
Msa1049010 MtrunA17_Chr1g0168661 63.107 103 38 0 13 115 22 124 6.32e-43 148
Msa1049010 MtrunA17_Chr7g0228231 59.813 107 43 0 12 118 14 120 7.91e-42 144
Msa1049010 MtrunA17_Chr2g0294811 68.478 92 29 0 1 92 1 92 9.80e-42 140
Msa1049010 MtrunA17_Chr6g0450101 53.719 121 54 1 1 119 1 121 1.63e-41 143
Msa1049010 MtrunA17_Chr3g0080861 58.036 112 46 1 10 121 35 145 1.74e-41 150
Msa1049010 MtrunA17_Chr8g0343831 59.322 118 44 1 1 118 1 114 2.01e-41 144
Msa1049010 MtrunA17_Chr1g0194291 56.140 114 50 0 9 122 18 131 4.33e-41 144
Msa1049010 MtrunA17_Chr1g0209661 56.522 115 50 0 8 122 23 137 4.45e-41 145
Msa1049010 MtrunA17_Chr8g0354661 59.434 106 43 0 10 115 35 140 5.54e-41 149
Msa1049010 MtrunA17_Chr3g0099131 57.547 106 45 0 10 115 39 144 2.02e-40 148
Msa1049010 MtrunA17_Chr1g0194301 54.955 111 50 0 12 122 33 143 5.08e-40 141
Msa1049010 MtrunA17_Chr7g0240821 48.485 132 68 0 17 148 6 137 6.61e-40 139
Msa1049010 MtrunA17_Chr1g0180391 60.000 105 42 0 12 116 19 123 9.91e-40 139
Msa1049010 MtrunA17_Chr5g0434911 54.054 111 51 0 7 117 16 126 7.74e-39 138
Msa1049010 MtrunA17_Chr1g0154031 43.210 162 87 3 12 172 76 233 8.07e-39 141
Msa1049010 MtrunA17_Chr7g0220341 57.273 110 45 1 10 117 23 132 1.02e-38 137
Msa1049010 MtrunA17_Chr2g0322521 58.879 107 44 0 9 115 26 132 1.14e-38 140
Msa1049010 MtrunA17_Chr5g0434931 55.140 107 48 0 11 117 34 140 1.55e-38 137
Msa1049010 MtrunA17_Chr5g0395221 67.045 88 29 0 1 88 1 88 1.25e-37 129
Msa1049010 MtrunA17_Chr5g0434831 56.075 107 47 0 11 117 6 112 3.28e-37 131
Msa1049010 MtrunA17_Chr4g0068921 53.043 115 54 0 8 122 20 134 6.15e-37 130
Msa1049010 MtrunA17_Chr7g0228991 55.140 107 48 0 11 117 28 134 9.82e-37 132
Msa1049010 MtrunA17_Chr2g0323321 58.095 105 43 1 1 105 1 104 1.02e-36 127
Msa1049010 MtrunA17_Chr2g0293911 53.043 115 54 0 8 122 20 134 1.80e-36 133
Msa1049010 MtrunA17_Chr8g0360111 56.863 102 44 0 11 112 24 125 3.83e-36 130
Msa1049010 MtrunA17_Chr2g0327821 53.846 104 48 0 12 115 6 109 8.85e-36 129
Msa1049010 MtrunA17_Chr8g0342511 60.920 87 34 0 1 87 1 87 3.99e-35 123
Msa1049010 MtrunA17_Chr1g0192411 41.463 164 87 4 1 161 1 158 5.56e-35 131
Msa1049010 MtrunA17_Chr4g0030881 52.727 110 45 1 13 115 8 117 6.77e-35 127
Msa1049010 MtrunA17_Chr8g0342531 60.674 89 35 0 1 89 1 89 8.15e-35 124
Msa1049010 MtrunA17_Chr5g0434841 53.774 106 49 0 11 116 19 124 9.15e-35 128
Msa1049010 MtrunA17_Chr5g0440781 47.788 113 57 2 13 124 13 124 2.32e-33 121
Msa1049010 MtrunA17_Chr5g0440761 47.788 113 57 2 13 124 13 124 8.81e-33 122
Msa1049010 MtrunA17_Chr5g0441141 47.788 113 57 2 13 124 13 124 9.53e-33 122
Msa1049010 MtrunA17_Chr4g0042621 69.663 89 23 2 89 173 15 103 1.36e-32 123
Msa1049010 MtrunA17_Chr8g0334881 47.706 109 55 2 12 119 10 117 1.00e-31 120
Msa1049010 MtrunA17_Chr5g0441131 47.414 116 59 2 10 124 7 121 3.19e-31 115
Msa1049010 MtrunA17_Chr4g0013361 50.000 108 53 1 8 114 6 113 3.43e-31 118
Msa1049010 MtrunA17_Chr8g0342461 55.556 90 39 1 1 89 1 90 3.94e-31 114
Msa1049010 MtrunA17_Chr8g0342471 55.556 90 39 1 1 89 1 90 1.25e-30 112
Msa1049010 MtrunA17_Chr3g0099141 51.724 87 42 0 8 94 36 122 1.49e-30 112
Msa1049010 MtrunA17_Chr3g0093811 56.044 91 40 0 44 134 14 104 3.13e-30 115
Msa1049010 MtrunA17_Chr3g0133601 51.402 107 51 1 9 115 32 137 9.90e-30 112
Msa1049010 MtrunA17_Chr5g0401731 47.706 109 56 1 14 122 15 122 6.04e-29 113
Msa1049010 MtrunA17_Chr6g0454921 45.946 111 59 1 14 124 15 124 6.09e-29 110
Msa1049010 MtrunA17_Chr4g0008551 46.903 113 55 2 14 126 38 145 5.80e-27 108
Msa1049010 MtrunA17_Chr7g0238631 48.571 105 53 1 12 116 111 214 1.76e-26 109
Msa1049010 MtrunA17_Chr4g0053431 48.039 102 52 1 14 115 5 105 2.06e-26 105
Msa1049010 MtrunA17_Chr5g0429661 49.495 99 47 2 12 109 120 216 3.28e-26 106
Msa1049010 MtrunA17_Chr7g0229101 64.286 70 25 0 44 113 4 73 3.22e-25 100
Msa1049010 MtrunA17_Chr7g0229131 58.108 74 31 0 44 117 4 77 1.73e-24 97.4
Msa1049010 MtrunA17_Chr4g0058991 43.243 111 62 1 8 118 203 312 1.82e-24 102
Msa1049010 MtrunA17_Chr3g0117511 42.342 111 63 1 8 118 177 286 5.94e-24 101
Msa1049010 MtrunA17_Chr6g0453751 50.000 92 37 2 11 93 19 110 1.69e-23 93.6
Msa1049010 MtrunA17_Chr5g0434901 61.765 68 26 0 46 113 7 74 3.54e-23 92.4
Msa1049010 MtrunA17_Chr5g0425591 48.235 85 43 1 10 93 7 91 8.60e-23 90.5
Msa1049010 MtrunA17_Chr3g0139671 40.952 105 61 1 12 116 83 186 3.42e-22 97.1
Msa1049010 MtrunA17_Chr5g0437321 44.444 99 54 1 14 112 19 116 8.29e-22 93.2
Msa1049010 MtrunA17_Chr1g0157731 40.000 105 62 1 12 116 89 192 2.83e-21 94.4
Msa1049010 MtrunA17_Chr7g0228531 39.450 109 64 2 10 118 216 322 1.40e-20 91.7
Msa1049010 MtrunA17_Chr6g0480581 41.584 101 58 1 14 114 4 103 1.54e-20 88.6
Msa1049010 MtrunA17_Chr6g0460661 36.885 122 75 2 14 135 16 135 3.72e-20 85.5
Msa1049010 MtrunA17_Chr6g0460671 31.977 172 109 4 14 184 99 263 4.82e-20 89.4
Msa1049010 MtrunA17_Chr4g0042501 40.870 115 60 3 2 115 98 205 1.19e-19 89.0
Msa1049010 MtrunA17_Chr5g0417621 41.346 104 58 2 14 116 134 235 2.34e-19 88.2
Msa1049010 MtrunA17_Chr5g0395231 60.714 56 22 0 78 133 5 60 4.38e-19 84.7
Msa1049010 MtrunA17_Chr3g0125801 41.176 102 59 1 14 115 16 116 7.50e-19 85.1
Msa1049010 MtrunA17_Chr5g0397841 42.857 98 55 1 12 109 108 204 8.08e-19 86.7
Msa1049010 MtrunA17_Chr7g0254261 40.678 118 63 3 3 115 74 189 1.02e-17 82.8
Msa1049010 MtrunA17_Chr7g0228401 44.186 86 47 1 25 110 290 374 1.98e-17 82.8
Msa1049010 MtrunA17_Chr7g0247141 65.957 47 15 1 1 46 1 47 3.46e-17 74.7
Msa1049010 MtrunA17_Chr7g0233061 39.623 106 43 2 14 110 180 273 4.46e-17 80.9
Msa1049010 MtrunA17_Chr1g0177901 47.126 87 42 2 24 110 7 89 5.58e-17 78.2
Msa1049010 MtrunA17_Chr7g0238651 35.938 128 70 3 17 140 10 129 1.07e-16 79.7
Msa1049010 MtrunA17_Chr7g0228481 36.634 101 62 2 10 110 216 314 1.37e-16 79.7
Msa1049010 MtrunA17_Chr5g0416341 38.384 99 60 1 17 115 29 126 2.35e-15 76.3
Msa1049010 MtrunA17_Chr1g0193901 51.724 58 27 1 12 68 11 68 4.81e-15 70.1
Msa1049010 MtrunA17_Chr1g0193891 51.724 58 27 1 12 68 11 68 4.81e-15 70.1
Msa1049010 MtrunA17_Chr1g0193871 51.724 58 27 1 12 68 11 68 4.81e-15 70.1
Msa1049010 MtrunA17_Chr1g0193881 51.724 58 27 1 12 68 11 68 4.81e-15 70.1
Msa1049010 MtrunA17_Chr8g0362231 36.364 99 62 1 17 115 25 122 6.31e-14 72.0
Msa1049010 MtrunA17_Chr3g0145551 67.500 40 13 0 92 131 2 41 1.09e-12 62.8
Msa1049010 MtrunA17_Chr5g0434871 58.140 43 18 0 74 116 2 44 2.03e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1049010 AT5G15310.2 61.468 327 100 7 1 313 1 315 5.36e-123 355
Msa1049010 AT5G15310.1 60.597 335 101 7 1 313 1 326 7.06e-123 355
Msa1049010 AT3G01140.2 55.932 354 106 8 1 313 1 345 3.28e-116 339
Msa1049010 AT3G01140.1 55.899 356 103 10 1 313 44 388 4.05e-113 333
Msa1049010 AT5G15310.4 72.273 220 42 3 1 201 1 220 4.38e-105 307
Msa1049010 AT3G61250.1 66.471 170 56 1 1 170 1 169 2.49e-80 246
Msa1049010 AT4G21440.1 75.940 133 32 0 1 133 1 133 8.36e-78 241
Msa1049010 AT5G16770.4 49.801 251 110 5 1 238 1 248 6.89e-77 238
Msa1049010 AT5G16770.3 49.801 251 110 5 1 238 1 248 6.89e-77 238
Msa1049010 AT5G16770.1 50.196 255 103 7 1 238 1 248 2.33e-76 237
Msa1049010 AT5G16770.2 50.196 255 103 7 1 238 1 248 2.33e-76 237
Msa1049010 AT3G02940.2 74.436 133 34 0 1 133 1 133 4.60e-75 233
Msa1049010 AT4G05100.1 77.692 130 28 1 1 129 1 130 6.17e-75 233
Msa1049010 AT3G02940.1 74.436 133 34 0 1 133 1 133 1.28e-74 232
Msa1049010 AT3G02940.3 74.436 133 34 0 1 133 1 133 1.28e-74 232
Msa1049010 AT1G34670.1 73.188 138 35 1 1 136 1 138 8.75e-74 231
Msa1049010 AT4G28110.1 74.419 129 33 0 1 129 1 129 1.16e-73 228
Msa1049010 AT5G10280.1 68.421 133 42 0 1 133 1 133 1.40e-69 219
Msa1049010 AT5G65230.1 68.657 134 42 0 1 134 1 134 2.38e-68 216
Msa1049010 AT4G17785.1 40.659 364 158 13 1 312 1 358 2.38e-68 217
Msa1049010 AT5G61420.2 73.438 128 34 0 1 128 1 128 3.57e-68 217
Msa1049010 AT5G07690.1 74.219 128 33 0 1 128 1 128 5.96e-68 216
Msa1049010 AT4G34990.1 53.846 195 82 2 1 188 1 194 2.23e-67 212
Msa1049010 AT4G17785.2 42.216 334 146 11 1 291 1 330 4.11e-67 214
Msa1049010 AT4G22680.1 70.229 131 39 0 1 131 1 131 5.86e-67 211
Msa1049010 AT5G60890.1 68.939 132 41 0 1 132 1 132 2.44e-66 210
Msa1049010 AT5G07700.1 72.656 128 35 0 1 128 1 128 3.83e-66 211
Msa1049010 AT5G07700.2 72.656 128 35 0 1 128 1 128 3.83e-66 211
Msa1049010 AT4G12350.1 67.153 137 45 0 1 137 1 137 4.29e-66 209
Msa1049010 AT5G16600.1 70.992 131 38 0 1 131 1 131 1.04e-65 209
Msa1049010 AT5G54230.1 72.093 129 36 0 1 129 1 129 1.50e-65 209
Msa1049010 AT1G18570.1 65.584 154 45 3 1 147 1 153 2.64e-65 209
Msa1049010 AT1G74080.1 70.079 127 38 0 1 127 1 127 3.96e-65 208
Msa1049010 AT4G09460.1 68.182 132 42 0 1 132 1 132 1.73e-64 203
Msa1049010 AT1G66230.1 69.531 128 39 0 1 128 1 128 4.05e-64 204
Msa1049010 AT2G16720.1 67.424 132 43 0 1 132 1 132 1.01e-63 202
Msa1049010 AT1G22640.1 65.672 134 46 0 1 134 1 134 1.03e-63 202
Msa1049010 AT1G35515.1 63.830 141 47 1 1 137 1 141 1.82e-63 200
Msa1049010 AT4G38620.1 65.152 132 46 0 1 132 1 132 3.75e-63 201
Msa1049010 AT5G56110.1 60.667 150 59 0 1 150 1 150 5.60e-63 202
Msa1049010 AT2G31180.1 73.729 118 31 0 1 118 1 118 1.77e-62 199
Msa1049010 AT1G57560.1 64.539 141 50 0 1 141 1 141 2.38e-62 200
Msa1049010 AT5G26660.1 70.312 128 38 0 1 128 1 128 3.19e-62 201
Msa1049010 AT5G62470.2 55.172 174 59 3 1 166 1 163 4.04e-62 201
Msa1049010 AT3G47600.1 53.977 176 65 3 1 166 1 170 7.40e-62 200
Msa1049010 AT1G57560.2 67.176 131 43 0 1 131 1 131 8.19e-62 198
Msa1049010 AT3G23250.1 52.308 195 74 2 1 195 1 176 3.88e-61 196
Msa1049010 AT1G06180.1 73.276 116 31 0 1 116 1 116 9.03e-61 194
Msa1049010 AT5G62470.1 55.172 174 58 4 1 166 1 162 1.89e-60 197
Msa1049010 AT3G13540.1 66.400 125 42 0 4 128 15 139 1.95e-60 193
Msa1049010 AT1G09540.1 65.909 132 45 0 1 132 1 132 6.23e-60 196
Msa1049010 AT1G08810.1 69.672 122 37 0 1 122 1 122 8.16e-60 193
Msa1049010 AT1G74430.1 64.925 134 47 0 1 134 1 134 1.32e-59 192
Msa1049010 AT4G01680.3 68.504 127 40 0 1 127 1 127 2.18e-59 190
Msa1049010 AT1G74650.1 47.573 206 79 4 1 190 1 193 4.34e-59 192
Msa1049010 AT4G01680.1 68.504 127 40 0 1 127 1 127 9.13e-59 192
Msa1049010 AT1G18710.1 64.844 128 45 0 1 128 1 128 3.50e-58 188
Msa1049010 AT5G62320.1 62.406 133 43 1 2 127 3 135 3.51e-58 187
Msa1049010 AT5G14340.1 60.606 132 52 0 1 132 13 144 1.73e-57 187
Msa1049010 AT3G28910.1 66.393 122 41 0 1 122 1 122 4.03e-57 187
Msa1049010 AT1G16490.1 67.241 116 38 0 2 117 4 119 8.03e-57 185
Msa1049010 AT3G28470.1 65.414 133 46 0 1 133 1 133 1.10e-56 186
Msa1049010 AT5G15310.3 50.403 248 92 7 88 313 9 247 1.77e-56 183
Msa1049010 AT5G49330.1 68.103 116 37 0 1 116 1 116 1.05e-55 184
Msa1049010 AT3G62610.1 68.103 116 37 0 1 116 1 116 3.22e-55 183
Msa1049010 AT4G01680.2 62.590 139 40 1 1 127 1 139 3.58e-55 183
Msa1049010 AT1G79180.1 65.812 117 40 0 2 118 4 120 4.33e-55 181
Msa1049010 AT1G56160.1 67.241 116 38 0 2 117 4 119 1.62e-54 180
Msa1049010 AT2G47460.1 44.019 209 102 3 1 206 1 197 3.65e-54 181
Msa1049010 AT3G12720.1 61.157 121 47 0 6 126 16 136 3.75e-52 174
Msa1049010 AT3G12820.1 64.655 116 41 0 3 118 5 120 7.00e-51 168
Msa1049010 AT1G63910.1 56.391 133 58 0 1 133 1 133 9.56e-51 172
Msa1049010 AT3G13890.2 62.069 116 44 0 1 116 1 116 1.38e-50 171
Msa1049010 AT4G37780.1 61.538 117 44 1 1 116 1 117 1.13e-49 167
Msa1049010 AT5G23000.1 63.248 117 42 1 1 116 1 117 1.19e-49 168
Msa1049010 AT3G49690.1 64.957 117 40 1 1 116 1 117 2.02e-49 167
Msa1049010 AT5G57620.1 62.393 117 43 1 1 116 1 117 6.06e-49 166
Msa1049010 AT1G79180.2 50.667 150 41 1 2 118 4 153 2.72e-48 164
Msa1049010 AT5G65790.1 63.248 117 42 1 1 116 1 117 3.26e-48 166
Msa1049010 AT2G36890.1 58.268 127 52 1 1 126 1 127 1.29e-47 162
Msa1049010 AT3G13890.1 57.600 125 44 1 1 116 1 125 1.75e-47 163
Msa1049010 AT2G36890.2 58.268 127 52 1 1 126 42 168 3.16e-47 162
Msa1049010 AT5G12870.1 64.815 108 38 0 12 119 18 125 1.08e-46 159
Msa1049010 AT5G14750.1 63.462 104 38 0 13 116 17 120 1.28e-45 154
Msa1049010 AT3G08500.1 64.815 108 38 0 9 116 27 134 1.09e-44 155
Msa1049010 AT5G40330.1 62.500 104 39 0 13 116 13 116 1.34e-44 152
Msa1049010 AT5G35550.1 65.421 107 37 0 12 118 14 120 2.02e-44 152
Msa1049010 AT3G27920.1 60.952 105 41 0 13 117 15 119 2.76e-43 149
Msa1049010 AT5G52600.1 52.143 140 58 1 12 142 12 151 3.07e-43 147
Msa1049010 AT3G24310.1 62.857 105 39 0 11 115 17 121 6.78e-43 149
Msa1049010 AT5G40350.1 59.633 109 44 0 12 120 17 125 7.54e-43 147
Msa1049010 AT1G48000.1 59.292 113 46 0 10 122 30 142 2.41e-42 146
Msa1049010 AT4G13480.1 63.107 103 38 0 13 115 7 109 4.77e-42 146
Msa1049010 AT2G32460.1 59.259 108 44 0 8 115 14 121 7.25e-42 151
Msa1049010 AT2G26960.1 55.752 113 49 1 9 121 17 128 8.18e-42 150
Msa1049010 AT2G32460.2 60.000 105 42 0 11 115 5 109 8.38e-42 151
Msa1049010 AT5G55020.1 59.821 112 44 1 10 121 24 134 9.48e-42 151
Msa1049010 AT4G26930.1 58.036 112 46 1 10 121 17 127 1.06e-41 149
Msa1049010 AT5G06100.1 59.048 105 43 0 11 115 31 135 3.74e-41 149
Msa1049010 AT5G26660.2 74.419 86 22 0 43 128 12 97 4.02e-41 145
Msa1049010 AT3G27810.1 56.364 110 48 0 12 121 20 129 4.49e-41 143
Msa1049010 AT3G01530.1 59.048 105 43 0 12 116 25 129 6.76e-41 142
Msa1049010 AT3G11440.2 58.654 104 43 0 12 115 41 144 7.14e-41 148
Msa1049010 AT4G25560.1 60.377 106 42 0 13 118 11 116 8.86e-41 144
Msa1049010 AT5G06100.5 59.048 105 43 0 11 115 31 135 9.26e-41 149
Msa1049010 AT5G06100.2 59.048 105 43 0 11 115 31 135 9.26e-41 149
Msa1049010 AT5G06100.3 59.048 105 43 0 11 115 31 135 9.26e-41 149
Msa1049010 AT5G06100.4 59.048 105 43 0 11 115 31 135 9.26e-41 149
Msa1049010 AT3G11440.3 58.654 104 43 0 12 115 41 144 2.07e-40 148
Msa1049010 AT3G11440.4 58.654 104 43 0 12 115 41 144 2.07e-40 148
Msa1049010 AT3G11440.1 58.654 104 43 0 12 115 41 144 2.07e-40 148
Msa1049010 AT3G30210.1 60.577 104 41 0 11 114 26 129 2.49e-40 142
Msa1049010 AT5G52260.1 63.208 106 39 0 13 118 13 118 3.60e-40 142
Msa1049010 AT1G66370.1 56.522 115 46 1 1 115 1 111 8.10e-40 140
Msa1049010 AT1G25340.1 54.783 115 52 0 13 127 19 133 2.12e-39 140
Msa1049010 AT3G48920.1 57.143 105 45 0 13 117 19 123 2.86e-39 139
Msa1049010 AT2G47190.1 50.435 115 57 0 8 122 16 130 5.68e-38 136
Msa1049010 AT3G53200.1 58.654 104 43 0 12 115 9 112 1.10e-37 134
Msa1049010 AT1G68320.1 54.955 111 50 0 12 122 19 129 1.29e-37 135
Msa1049010 AT3G06490.1 52.846 123 58 0 8 130 15 137 1.95e-37 136
Msa1049010 AT1G66380.1 60.952 105 41 0 11 115 7 111 6.89e-37 129
Msa1049010 AT1G56650.1 50.000 144 62 2 11 144 7 150 1.78e-36 131
Msa1049010 AT3G46130.1 55.238 105 47 0 11 115 8 112 2.41e-36 131
Msa1049010 AT5G59780.3 55.340 103 46 0 13 115 9 111 3.38e-36 130
Msa1049010 AT5G49620.1 51.220 123 60 0 8 130 22 144 6.64e-36 131
Msa1049010 AT1G66390.1 59.048 105 43 0 11 115 7 111 2.48e-35 128
Msa1049010 AT1G25340.2 52.174 115 50 1 13 127 19 128 1.11e-34 127
Msa1049010 AT3G47600.2 49.242 132 51 3 45 166 39 164 1.54e-34 128
Msa1049010 AT1G25340.3 52.174 115 50 1 13 127 19 128 2.41e-34 127
Msa1049010 AT3G60460.1 49.123 114 56 2 7 119 6 118 3.23e-33 124
Msa1049010 AT5G49620.2 45.985 137 60 1 8 130 22 158 3.01e-32 122
Msa1049010 AT5G14750.3 71.014 69 20 0 48 116 18 86 2.72e-31 115
Msa1049010 AT5G35550.2 72.973 74 20 0 45 118 50 123 3.39e-31 118
Msa1049010 AT3G12820.2 71.831 71 20 0 48 118 2 72 1.41e-30 114
Msa1049010 AT1G22640.3 61.842 76 29 0 59 134 2 77 5.52e-29 110
Msa1049010 AT2G26950.1 44.828 116 62 2 9 124 13 126 9.09e-29 114
Msa1049010 AT5G40350.2 61.842 76 29 0 45 120 5 80 1.90e-28 108
Msa1049010 AT5G59780.2 63.514 74 27 0 42 115 17 90 2.50e-28 109
Msa1049010 AT3G53200.2 65.753 73 25 0 43 115 7 79 2.72e-28 108
Msa1049010 AT3G46130.3 65.278 72 25 0 44 115 9 80 3.71e-28 109
Msa1049010 AT3G46130.4 63.514 74 27 0 42 115 17 90 5.14e-28 108
Msa1049010 AT1G18960.1 45.902 122 59 4 14 133 10 126 1.34e-27 109
Msa1049010 AT1G71030.1 51.579 95 45 1 38 132 7 100 1.77e-27 106
Msa1049010 AT1G71030.2 56.098 82 36 0 51 132 5 86 2.79e-27 105
Msa1049010 AT3G27810.2 61.111 72 28 0 45 116 4 75 9.22e-27 103
Msa1049010 AT2G23290.1 49.038 104 52 1 14 117 13 115 2.35e-26 106
Msa1049010 AT4G37260.1 47.664 107 55 1 14 120 13 118 3.88e-26 105
Msa1049010 AT5G02320.1 46.667 105 55 1 12 116 125 228 1.28e-25 107
Msa1049010 AT5G02320.2 46.667 105 55 1 12 116 125 228 1.28e-25 107
Msa1049010 AT5G02320.3 46.667 105 55 1 12 116 65 168 1.57e-25 106
Msa1049010 AT3G50060.1 45.098 102 55 1 14 115 6 106 3.21e-25 103
Msa1049010 AT3G09230.1 46.364 110 50 2 14 119 55 159 4.59e-25 104
Msa1049010 AT4G18770.1 43.243 111 62 1 8 118 211 320 5.27e-25 104
Msa1049010 AT3G09370.2 46.154 104 55 1 12 115 133 235 6.51e-25 104
Msa1049010 AT3G09370.1 46.154 104 55 1 12 115 128 230 6.54e-25 104
Msa1049010 AT5G58850.1 45.370 108 56 2 12 118 103 208 6.72e-25 104
Msa1049010 AT3G09370.3 46.154 104 55 1 12 115 141 243 8.28e-25 104
Msa1049010 AT5G67300.1 45.098 102 55 1 14 115 6 106 1.43e-24 101
Msa1049010 AT1G66380.3 66.667 72 24 0 44 115 7 78 2.09e-24 95.5
Msa1049010 AT2G39880.1 48.039 102 52 1 14 115 50 150 4.17e-24 101
Msa1049010 AT3G23250.2 43.796 137 58 2 59 195 2 119 6.29e-24 97.8
Msa1049010 AT3G55730.1 46.226 106 56 1 14 119 56 160 7.77e-24 100
Msa1049010 AT5G11050.1 43.396 106 57 2 14 118 105 208 2.91e-23 99.4
Msa1049010 AT3G27785.1 45.098 102 55 1 8 109 183 283 3.40e-23 99.4
Msa1049010 AT5G40360.1 43.810 105 57 2 12 116 156 258 3.67e-23 98.6
Msa1049010 AT5G14750.4 67.241 58 19 0 59 116 2 59 2.24e-22 91.3
Msa1049010 AT5G14750.2 67.241 58 19 0 59 116 2 59 2.24e-22 91.3
Msa1049010 AT1G66380.2 56.962 79 34 0 11 89 7 85 2.30e-22 90.5
Msa1049010 AT4G32730.5 40.952 105 61 1 12 116 85 188 2.82e-22 97.8
Msa1049010 AT4G32730.5 32.075 106 70 2 14 118 35 139 6.85e-11 63.5
Msa1049010 AT4G32730.4 40.952 105 61 1 12 116 85 188 2.82e-22 97.8
Msa1049010 AT4G32730.4 32.075 106 70 2 14 118 35 139 6.85e-11 63.5
Msa1049010 AT4G32730.3 40.952 105 61 1 12 116 85 188 2.82e-22 97.8
Msa1049010 AT4G32730.3 32.075 106 70 2 14 118 35 139 6.85e-11 63.5
Msa1049010 AT4G32730.2 40.952 105 61 1 12 116 85 188 2.82e-22 97.8
Msa1049010 AT4G32730.2 32.075 106 70 2 14 118 35 139 6.85e-11 63.5
Msa1049010 AT4G32730.1 40.952 105 61 1 12 116 85 188 2.92e-22 97.8
Msa1049010 AT4G32730.1 32.075 106 70 2 14 118 35 139 6.50e-11 63.5
Msa1049010 AT5G11510.3 41.905 105 60 1 12 116 79 182 9.35e-22 96.3
Msa1049010 AT5G11510.1 41.905 105 60 1 12 116 79 182 9.35e-22 96.3
Msa1049010 AT5G11510.4 41.905 105 60 1 12 116 79 182 9.35e-22 96.3
Msa1049010 AT5G11510.2 41.905 105 60 1 12 116 79 182 1.18e-21 95.9
Msa1049010 AT5G11510.5 41.905 105 60 1 12 116 79 182 1.26e-21 95.9
Msa1049010 AT1G17950.1 43.137 102 57 1 14 115 5 105 1.65e-21 92.0
Msa1049010 AT1G73410.1 40.984 122 62 3 14 135 6 117 2.39e-20 88.6
Msa1049010 AT1G73410.2 43.137 102 57 1 14 115 6 106 3.03e-20 87.4
Msa1049010 AT1G69560.1 38.889 108 65 1 9 116 102 208 3.70e-20 89.7
Msa1049010 AT1G69560.2 38.889 108 65 1 9 116 118 224 4.66e-20 89.7
Msa1049010 AT5G61420.1 79.167 48 10 0 81 128 2 49 5.03e-20 88.6
Msa1049010 AT2G25230.1 38.095 126 75 2 1 124 13 137 7.37e-20 87.0
Msa1049010 AT4G33450.1 37.168 113 65 2 3 115 13 119 1.24e-19 86.7
Msa1049010 AT1G26780.2 40.385 104 61 1 12 115 96 198 4.32e-19 87.0
Msa1049010 AT1G26780.1 40.385 104 61 1 12 115 96 198 5.01e-19 85.5
Msa1049010 AT5G17800.1 39.216 102 61 1 14 115 93 193 2.47e-17 81.6
Msa1049010 AT4G28110.2 73.810 42 11 0 88 129 4 45 5.70e-17 78.2
Msa1049010 AT3G29020.1 35.238 105 67 1 14 118 65 168 5.85e-17 79.0
Msa1049010 AT3G29020.2 35.922 103 65 1 14 116 67 168 6.94e-17 80.1
Msa1049010 AT4G00540.2 39.640 111 63 2 12 119 101 210 7.72e-17 80.9
Msa1049010 AT4G00540.1 39.640 111 63 2 12 119 99 208 1.12e-16 80.5
Msa1049010 AT5G39700.1 35.577 104 66 1 15 118 57 159 1.64e-15 73.9
Msa1049010 AT1G74650.3 35.659 129 54 4 78 190 2 117 2.37e-15 74.7
Msa1049010 AT1G14350.2 38.384 99 60 1 17 115 28 125 6.70e-15 75.1
Msa1049010 AT1G14350.1 38.384 99 60 1 17 115 28 125 6.70e-15 75.1
Msa1049010 AT3G28910.2 66.667 45 15 0 78 122 2 46 8.79e-15 73.2
Msa1049010 AT5G40430.1 34.188 117 75 2 4 120 44 158 2.08e-14 72.4
Msa1049010 AT2G37630.1 34.653 101 64 1 17 115 7 107 2.38e-14 73.2
Msa1049010 AT2G02820.2 37.374 99 61 1 17 115 33 130 3.09e-14 73.6
Msa1049010 AT1G22640.2 63.830 47 17 0 88 134 16 62 3.18e-14 70.5
Msa1049010 AT2G02820.1 37.374 99 61 1 17 115 33 130 3.21e-14 73.2
Msa1049010 AT2G02820.3 37.374 99 61 1 17 115 33 130 3.38e-14 72.4
Msa1049010 AT1G74430.2 53.448 58 27 0 77 134 8 65 3.90e-14 70.5
Msa1049010 AT5G59780.1 65.116 43 15 0 73 115 4 46 1.78e-13 67.8
Msa1049010 AT4G25560.2 61.224 49 19 0 70 118 2 50 1.78e-13 68.9
Msa1049010 AT3G46130.2 65.116 43 15 0 73 115 4 46 3.15e-13 67.8
Msa1049010 AT5G14340.2 59.091 44 18 0 88 131 10 53 4.47e-12 64.3

Find 83 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAGGATCAATTCCCATTT+TGG 0.167566 7_2:-11748136 None:intergenic
GAATTTGTCAGCGGCATAAA+AGG 0.201385 7_2:-11745993 None:intergenic
TATATACTCTAATCTTTATA+TGG 0.220433 7_2:-11746119 None:intergenic
ATTTCATTATCTGTTCTCTT+AGG 0.277610 7_2:-11748075 None:intergenic
GCTAAGATTTGCAGCATTCT+TGG 0.289751 7_2:-11748202 None:intergenic
TCAAACCAATCAAAAGCTAT+TGG 0.311087 7_2:+11748935 Msa1049010:three_prime_UTR
GTTAGAATTCAAAGATTTGA+TGG 0.315601 7_2:+11748443 Msa1049010:CDS
AAAGAAGAAAATAAATAAAA+TGG 0.317849 7_2:+11748978 Msa1049010:three_prime_UTR
AACTTTCCCCTCTTAATATC+AGG 0.320397 7_2:-11746668 None:intergenic
AAATGCATGAAGTTGAATAA+TGG 0.352752 7_2:-11746711 None:intergenic
TAAGATGGACTAATTATCTA+AGG 0.387725 7_2:+11746645 Msa1049010:CDS
ATAATGAAATCAAGAACTAT+TGG 0.390797 7_2:+11748088 Msa1049010:CDS
GAGAAGTTGGAGGAGAAACT+TGG 0.394993 7_2:-11746094 None:intergenic
ACTTGAAGCTGAAGCAAGAT+TGG 0.402581 7_2:+11748251 Msa1049010:CDS
TTCATTAAAACATTTCCAAT+GGG 0.407361 7_2:+11746160 Msa1049010:exon
GTCATTGTCGGTTGAGTGCT+TGG 0.407492 7_2:+11749066 Msa1049010:three_prime_UTR
TCTTTATATGGTGGAGAAGT+TGG 0.409046 7_2:-11746107 None:intergenic
TGTTTCTGTAGACAAGTTGA+TGG 0.425864 7_2:+11749124 Msa1049010:three_prime_UTR
GAAAAGGTTGGTTTAAAGAA+AGG 0.426041 7_2:+11746199 Msa1049010:CDS
AAGAAGAAGGTGAGAAAGAG+TGG 0.428852 7_2:+11748394 Msa1049010:CDS
TGGAAGAGAAAGAGAAAGAA+AGG 0.429608 7_2:-11746074 None:intergenic
ATCTAAGGCCTGATATTAAG+AGG 0.433219 7_2:+11746660 Msa1049010:CDS
GTGTGTGGCTTCTTACTTGT+TGG 0.433307 7_2:+11749157 Msa1049010:three_prime_UTR
ATCTTAGCCACAAGGCTCAA+TGG 0.433665 7_2:+11748217 Msa1049010:CDS
CGTTCTTTGCCTACAAAAGC+TGG 0.434834 7_2:+11746289 Msa1049010:CDS
TCTTAGCCACAAGGCTCAAT+GGG 0.448848 7_2:+11748218 Msa1049010:CDS
TGATCTTCCTCAGATGTCCA+TGG 0.449291 7_2:-11746223 None:intergenic
CGCTCTCCGGTGACAAACTC+AGG 0.450060 7_2:-11748575 None:intergenic
TTTGATGGAGAATTCATCAA+TGG 0.459211 7_2:+11748458 Msa1049010:CDS
ATGAAGATAACAAGAACTAC+TGG 0.460330 7_2:+11748652 Msa1049010:CDS
AAAAGGTTGGTTTAAAGAAA+GGG 0.462253 7_2:+11746200 Msa1049010:CDS
AAGAACATGGTCATGGAAGC+TGG 0.467929 7_2:+11746266 Msa1049010:CDS
CACTTTCCCATTGAGCCTTG+TGG 0.471844 7_2:-11748224 None:intergenic
CAATTGCAACAGCATCAACT+TGG 0.472770 7_2:+11748297 Msa1049010:CDS
TATTATTAGAGCTTGAACAT+AGG 0.488378 7_2:-11749187 None:intergenic
TTTCATTAAAACATTTCCAA+TGG 0.493695 7_2:+11746159 Msa1049010:exon
TCATCTTCAAATCAAGTACT+TGG 0.499747 7_2:+11748366 Msa1049010:CDS
ACTTGTGATGGAAGTGGTAG+AGG 0.500500 7_2:+11748612 Msa1049010:CDS
TGTACAAGAAATTAATGAGA+TGG 0.504002 7_2:-11746024 None:intergenic
ATGGTTGTGAAATTAAGTTA+TGG 0.506421 7_2:+11748997 Msa1049010:three_prime_UTR
GTAAGAAAGCAATTCAATCA+TGG 0.514050 7_2:+11749025 Msa1049010:three_prime_UTR
GATTTGCAGCATTCTTGGAA+TGG 0.519998 7_2:-11748197 None:intergenic
GCAAGAGCTGCAGACTAAGA+TGG 0.520053 7_2:+11746630 Msa1049010:CDS
AATTTGTCAGCGGCATAAAA+GGG 0.535155 7_2:-11745992 None:intergenic
GTACAAGAAATTAATGAGAT+GGG 0.542200 7_2:-11746023 None:intergenic
GTACTTGGTATTAAAGAAGA+AGG 0.544001 7_2:+11748381 Msa1049010:CDS
TTACACTCTCCACCGCTCTC+CGG 0.544259 7_2:-11748588 None:intergenic
GATGGAAGTGGTAGAGGCGG+TGG 0.544558 7_2:+11748618 Msa1049010:CDS
ATACTCTAATCTTTATATGG+TGG 0.551635 7_2:-11746116 None:intergenic
TAGAACATTGGCGAATCAGA+AGG 0.556955 7_2:-11748705 None:intergenic
TCACCATGTTGTGAAAAGGT+TGG 0.557617 7_2:+11746187 Msa1049010:CDS
CAACATGGTGATCTCCCCAT+TGG 0.561281 7_2:-11746175 None:intergenic
TTGCTTGATAATTCTAACTC+CGG 0.569468 7_2:+11748549 Msa1049010:CDS
TTATATGGTGGAGAAGTTGG+AGG 0.574757 7_2:-11746104 None:intergenic
TACATTGAAGAACATGGTCA+TGG 0.574804 7_2:+11746259 Msa1049010:CDS
TTATCGATAGAAATTAGTGA+TGG 0.577496 7_2:+11748747 Msa1049010:three_prime_UTR
TCTAAGGCCTGATATTAAGA+GGG 0.578462 7_2:+11746661 Msa1049010:CDS
ATGATCAGTGCTGCTGAGGA+GGG 0.581711 7_2:+11748513 Msa1049010:CDS
CGGTGACCTGAGTTTGTCAC+CGG 0.586084 7_2:+11748569 Msa1049010:CDS
AATGATCAGTGCTGCTGAGG+AGG 0.587023 7_2:+11748512 Msa1049010:CDS
CGGTGACAAACTCAGGTCAC+CGG 0.587763 7_2:-11748568 None:intergenic
GGAGAGTGTAATACTTGTGA+TGG 0.589020 7_2:+11748600 Msa1049010:CDS
GAGATCACCATGTTGTGAAA+AGG 0.593939 7_2:+11746183 Msa1049010:CDS
GTAGATGATGAAGGTTGTGA+TGG 0.594359 7_2:-11748339 None:intergenic
TTTGCAGGACTTGAGAGGTG+TGG 0.597250 7_2:+11746608 Msa1049010:intron
GATGATGATGTAGATGATGA+AGG 0.598426 7_2:-11748348 None:intergenic
GAAGGTGAGAAAGAGTGGAA+AGG 0.602261 7_2:+11748399 Msa1049010:CDS
TTATCTTACATTGAAGAACA+TGG 0.606328 7_2:+11746253 Msa1049010:CDS
TGTAATACTTGTGATGGAAG+TGG 0.616978 7_2:+11748606 Msa1049010:CDS
CTGAGTTTGTCACCGGAGAG+CGG 0.623921 7_2:+11748576 Msa1049010:CDS
TTGGTTTAAAGAAAGGGCCA+TGG 0.628472 7_2:+11746206 Msa1049010:CDS
TGCTGCAAATCTTAGCCACA+AGG 0.636234 7_2:+11748209 Msa1049010:CDS
GAAAGGGCCATGGACATCTG+AGG 0.637685 7_2:+11746216 Msa1049010:CDS
TCATTAAAACATTTCCAATG+GGG 0.645596 7_2:+11746161 Msa1049010:exon
CTAAGGCCTGATATTAAGAG+GGG 0.648811 7_2:+11746662 Msa1049010:CDS
GACAATGATCAGTGCTGCTG+AGG 0.654513 7_2:+11748509 Msa1049010:CDS
AGTTTGTCACCGGAGAGCGG+TGG 0.663951 7_2:+11748579 Msa1049010:CDS
TTATCAACGAAAATTAGAGA+CGG 0.669230 7_2:-11748842 None:intergenic
GGCAGAGAAGAATTTGTCAG+CGG 0.687212 7_2:-11746002 None:intergenic
TGTTCTCTTAGGCAAACGAG+TGG 0.693831 7_2:-11748064 None:intergenic
TGTGATGGAAGTGGTAGAGG+CGG 0.720815 7_2:+11748615 Msa1049010:CDS
TCAATATAAATCATTATACG+AGG 0.734219 7_2:-11745946 None:intergenic
GATGGCAAGACTCAAGTGTG+TGG 0.743375 7_2:+11749142 Msa1049010:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATACTTTATTTAGAAATA+TGG - chr7_2:11746786-11746805 None:intergenic 10.0%
!!! AAGTATTTTGATTTTAAAAT+AGG + chr7_2:11746798-11746817 Msa1049010:intron 10.0%
!!! AGTATTTTGATTTTAAAATA+GGG + chr7_2:11746799-11746818 Msa1049010:intron 10.0%
!!! AATTTTATTAACCATAAAAA+AGG - chr7_2:11747509-11747528 None:intergenic 10.0%
!! AAAGAAGAAAATAAATAAAA+TGG + chr7_2:11748978-11748997 Msa1049010:three_prime_UTR 10.0%
!! TATATACTCTAATCTTTATA+TGG - chr7_2:11746122-11746141 None:intergenic 15.0%
!!! TTTTATGTTTATGAAAAACA+TGG - chr7_2:11746916-11746935 None:intergenic 15.0%
!! TGTAAAATGCAAATAAATTA+TGG - chr7_2:11747259-11747278 None:intergenic 15.0%
!!! TTTTCGCTAATAAAAATTTA+GGG - chr7_2:11747971-11747990 None:intergenic 15.0%
!!! TTTTTCGCTAATAAAAATTT+AGG - chr7_2:11747972-11747991 None:intergenic 15.0%
!! TAAAAAAAGATTAACCAAAA+TGG + chr7_2:11748122-11748141 Msa1049010:CDS 15.0%
!! AAAAAAAGATTAACCAAAAT+GGG + chr7_2:11748123-11748142 Msa1049010:CDS 15.0%
!!! TTTTCTAATTATTAGAACAT+TGG - chr7_2:11748720-11748739 None:intergenic 15.0%
!! TCAATATAAATCATTATACG+AGG - chr7_2:11745949-11745968 None:intergenic 20.0%
!! TTTCATTAAAACATTTCCAA+TGG + chr7_2:11746159-11746178 Msa1049010:exon 20.0%
!! TTCATTAAAACATTTCCAAT+GGG + chr7_2:11746160-11746179 Msa1049010:exon 20.0%
!! ACGATGAAAAAAATATCAAA+TGG - chr7_2:11746998-11747017 None:intergenic 20.0%
!!! TTTTCCAATAATAGAATGAT+AGG - chr7_2:11747025-11747044 None:intergenic 20.0%
!! CTAGTACTAATAAAATATCA+AGG - chr7_2:11747194-11747213 None:intergenic 20.0%
!! TTCATACTTAAAAACTTAAG+AGG + chr7_2:11747216-11747235 Msa1049010:intron 20.0%
!!! TCATGAAATATCCTTTTTTA+TGG + chr7_2:11747495-11747514 Msa1049010:intron 20.0%
!! CAATTCAGTTTATATTCTTT+CGG + chr7_2:11747648-11747667 Msa1049010:intron 20.0%
!! GATCTTAATATGAAAAGTAA+GGG - chr7_2:11747795-11747814 None:intergenic 20.0%
!! TGATCTTAATATGAAAAGTA+AGG - chr7_2:11747796-11747815 None:intergenic 20.0%
!!! ATAGTAGTTTAATTTATGCA+TGG + chr7_2:11747901-11747920 Msa1049010:intron 20.0%
!!! ATTTTTTTGTCCTATACTTT+AGG + chr7_2:11748028-11748047 Msa1049010:intron 20.0%
!! ATAATGAAATCAAGAACTAT+TGG + chr7_2:11748088-11748107 Msa1049010:CDS 20.0%
!!! ATAATTCAACTTTTTAGTGT+TGG + chr7_2:11748861-11748880 Msa1049010:three_prime_UTR 20.0%
!! ATGGATTTCTGTTAAAAAAT+AGG + chr7_2:11749044-11749063 Msa1049010:three_prime_UTR 20.0%
! GTACAAGAAATTAATGAGAT+GGG - chr7_2:11746026-11746045 None:intergenic 25.0%
! TGTACAAGAAATTAATGAGA+TGG - chr7_2:11746027-11746046 None:intergenic 25.0%
! ATACTCTAATCTTTATATGG+TGG - chr7_2:11746119-11746138 None:intergenic 25.0%
! TCATTAAAACATTTCCAATG+GGG + chr7_2:11746161-11746180 Msa1049010:exon 25.0%
!!! AAAAGGTTGGTTTAAAGAAA+GGG + chr7_2:11746200-11746219 Msa1049010:CDS 25.0%
! TTATCTTACATTGAAGAACA+TGG + chr7_2:11746253-11746272 Msa1049010:CDS 25.0%
! TTTAGTGTAATCATATGTGT+CGG + chr7_2:11746491-11746510 Msa1049010:intron 25.0%
!!! GAAATTGGTTATTTTTTTGC+AGG + chr7_2:11746593-11746612 Msa1049010:intron 25.0%
!!! TAAGATGGACTAATTATCTA+AGG + chr7_2:11746645-11746664 Msa1049010:CDS 25.0%
! AAATGCATGAAGTTGAATAA+TGG - chr7_2:11746714-11746733 None:intergenic 25.0%
!! TATTCAACTTCATGCATTTT+TGG + chr7_2:11746715-11746734 Msa1049010:CDS 25.0%
!! ATTCAACTTCATGCATTTTT+GGG + chr7_2:11746716-11746735 Msa1049010:CDS 25.0%
! ATGAAAAACATGGAAAAATG+CGG - chr7_2:11746906-11746925 None:intergenic 25.0%
! TCTTCCTATCATTCTATTAT+TGG + chr7_2:11747018-11747037 Msa1049010:intron 25.0%
!! CACAATTACAACAACAATTT+TGG + chr7_2:11747083-11747102 Msa1049010:intron 25.0%
!! TAGAGCATGATTTTAAATTG+CGG - chr7_2:11747123-11747142 None:intergenic 25.0%
! AAAAGTAGCAAAAATCTTGA+TGG - chr7_2:11747166-11747185 None:intergenic 25.0%
!! ATTCTATCCTTTTGCATTTA+AGG - chr7_2:11747435-11747454 None:intergenic 25.0%
! ATGAATTGTCTATCACAATT+CGG - chr7_2:11747609-11747628 None:intergenic 25.0%
!!! GGGGTTTTGATTTTTTTTAA+CGG + chr7_2:11747673-11747692 Msa1049010:intron 25.0%
! AATTATCCGAATCGAATATT+TGG - chr7_2:11747700-11747719 None:intergenic 25.0%
!!! ATTCGATTCGGATAATTTTT+TGG + chr7_2:11747703-11747722 Msa1049010:intron 25.0%
!!! TTCGATTCGGATAATTTTTT+GGG + chr7_2:11747704-11747723 Msa1049010:intron 25.0%
!!! ATTTGATTTTTCTTCCTGAA+CGG + chr7_2:11747757-11747776 Msa1049010:intron 25.0%
! TAATTTATGCATGGATGTTA+AGG + chr7_2:11747910-11747929 Msa1049010:intron 25.0%
!! TAATAAAAATTTAGGGTGAG+GGG - chr7_2:11747964-11747983 None:intergenic 25.0%
!! CTAATAAAAATTTAGGGTGA+GGG - chr7_2:11747965-11747984 None:intergenic 25.0%
! ATTTCATTATCTGTTCTCTT+AGG - chr7_2:11748078-11748097 None:intergenic 25.0%
! GTTAGAATTCAAAGATTTGA+TGG + chr7_2:11748443-11748462 Msa1049010:CDS 25.0%
! TTATCGATAGAAATTAGTGA+TGG + chr7_2:11748747-11748766 Msa1049010:three_prime_UTR 25.0%
! TTATCAACGAAAATTAGAGA+CGG - chr7_2:11748845-11748864 None:intergenic 25.0%
! ATGGTTGTGAAATTAAGTTA+TGG + chr7_2:11748997-11749016 Msa1049010:three_prime_UTR 25.0%
! GTTAAAAAATAGGTCATTGT+CGG + chr7_2:11749054-11749073 Msa1049010:three_prime_UTR 25.0%
! TATTATTAGAGCTTGAACAT+AGG - chr7_2:11749190-11749209 None:intergenic 25.0%
!! GAAAAGGTTGGTTTAAAGAA+AGG + chr7_2:11746199-11746218 Msa1049010:CDS 30.0%
! GTTAAATTACCAGCTTTTGT+AGG - chr7_2:11746301-11746320 None:intergenic 30.0%
ACCAATTTCTCGATCTTTAA+CGG - chr7_2:11746582-11746601 None:intergenic 30.0%
! AGATCTAAAGAGTGTATACA+TGG - chr7_2:11746975-11746994 None:intergenic 30.0%
!!! TAGTCCATAGTTTTAACTTG+CGG + chr7_2:11747052-11747071 Msa1049010:intron 30.0%
TGTTGTTGTAATTGTGATAG+CGG - chr7_2:11747079-11747098 None:intergenic 30.0%
! GGATTAGAATTTTCTGTTCA+AGG - chr7_2:11747333-11747352 None:intergenic 30.0%
TAAAGAATGTGTTGGAAATG+TGG - chr7_2:11747354-11747373 None:intergenic 30.0%
TGGTACAATAAAGAATGTGT+TGG - chr7_2:11747362-11747381 None:intergenic 30.0%
! TAAATTTTGAACATGGCTGT+TGG - chr7_2:11747382-11747401 None:intergenic 30.0%
! CAGAGAGTAAATTTTGAACA+TGG - chr7_2:11747389-11747408 None:intergenic 30.0%
AGGACCACGTTAATTAAATT+GGG - chr7_2:11747415-11747434 None:intergenic 30.0%
AAGGACCACGTTAATTAAAT+TGG - chr7_2:11747416-11747435 None:intergenic 30.0%
TTCATGAACCAATGACTATT+TGG - chr7_2:11747482-11747501 None:intergenic 30.0%
!!! TTCTTTTTGGTTCGGTTTAA+CGG - chr7_2:11747586-11747605 None:intergenic 30.0%
! TATCACAATTCGGTTCTTTT+TGG - chr7_2:11747599-11747618 None:intergenic 30.0%
TCAGTTTATATTCTTTCGGT+AGG + chr7_2:11747652-11747671 Msa1049010:intron 30.0%
CAGTTTATATTCTTTCGGTA+GGG + chr7_2:11747653-11747672 Msa1049010:intron 30.0%
AGTTTATATTCTTTCGGTAG+GGG + chr7_2:11747654-11747673 Msa1049010:intron 30.0%
AACAATTCTAACAGTTCAGT+TGG + chr7_2:11747734-11747753 Msa1049010:intron 30.0%
! GCTAATAAAAATTTAGGGTG+AGG - chr7_2:11747966-11747985 None:intergenic 30.0%
! TTTTTGTCCTATACTTTAGG+TGG + chr7_2:11748031-11748050 Msa1049010:intron 30.0%
TCATCTTCAAATCAAGTACT+TGG + chr7_2:11748366-11748385 Msa1049010:CDS 30.0%
GTACTTGGTATTAAAGAAGA+AGG + chr7_2:11748381-11748400 Msa1049010:CDS 30.0%
TTTGATGGAGAATTCATCAA+TGG + chr7_2:11748458-11748477 Msa1049010:CDS 30.0%
! TTGCTTGATAATTCTAACTC+CGG + chr7_2:11748549-11748568 Msa1049010:CDS 30.0%
ATGAAGATAACAAGAACTAC+TGG + chr7_2:11748652-11748671 Msa1049010:CDS 30.0%
TCAAACCAATCAAAAGCTAT+TGG + chr7_2:11748935-11748954 Msa1049010:three_prime_UTR 30.0%
! GAAAACCAATAGCTTTTGAT+TGG - chr7_2:11748943-11748962 None:intergenic 30.0%
GTAAGAAAGCAATTCAATCA+TGG + chr7_2:11749025-11749044 Msa1049010:three_prime_UTR 30.0%
AATTTGTCAGCGGCATAAAA+GGG - chr7_2:11745995-11746014 None:intergenic 35.0%
TGGAAGAGAAAGAGAAAGAA+AGG - chr7_2:11746077-11746096 None:intergenic 35.0%
! TCTTTATATGGTGGAGAAGT+TGG - chr7_2:11746110-11746129 None:intergenic 35.0%
! AAACCAACCTTTTCACAACA+TGG - chr7_2:11746193-11746212 None:intergenic 35.0%
TACATTGAAGAACATGGTCA+TGG + chr7_2:11746259-11746278 Msa1049010:CDS 35.0%
TATAGTTCTTCCCTCCAAAA+TGG + chr7_2:11746366-11746385 Msa1049010:intron 35.0%
TCCGTTAAAGATCGAGAAAT+TGG + chr7_2:11746578-11746597 Msa1049010:intron 35.0%
!!! ATTTTTTTGCAGGACTTGAG+AGG + chr7_2:11746603-11746622 Msa1049010:intron 35.0%
! ATCTAAGGCCTGATATTAAG+AGG + chr7_2:11746660-11746679 Msa1049010:CDS 35.0%
! TCTAAGGCCTGATATTAAGA+GGG + chr7_2:11746661-11746680 Msa1049010:CDS 35.0%
AACTTTCCCCTCTTAATATC+AGG - chr7_2:11746671-11746690 None:intergenic 35.0%
GCAAAAATCTTGATGGAGTT+TGG - chr7_2:11747159-11747178 None:intergenic 35.0%
! AGATTCTGGAAAAACAACAC+AGG - chr7_2:11747285-11747304 None:intergenic 35.0%
TCAAGGAAATTGATATGCCA+TGG - chr7_2:11747316-11747335 None:intergenic 35.0%
GACACCCAATTTAATTAACG+TGG + chr7_2:11747408-11747427 Msa1049010:intron 35.0%
TTCGGTTTAACGGTTCAATT+TGG - chr7_2:11747576-11747595 None:intergenic 35.0%
!!! CAATTCGGTTCTTTTTGGTT+CGG - chr7_2:11747594-11747613 None:intergenic 35.0%
AACGGTCCAAATATTCGATT+CGG + chr7_2:11747691-11747710 Msa1049010:intron 35.0%
! TTGATGACCACCTAAAGTAT+AGG - chr7_2:11748041-11748060 None:intergenic 35.0%
!!! GGCAAAAGGGTTTCATTTTT+TGG - chr7_2:11748171-11748190 None:intergenic 35.0%
! GATGATGATGTAGATGATGA+AGG - chr7_2:11748351-11748370 None:intergenic 35.0%
! TGTAATACTTGTGATGGAAG+TGG + chr7_2:11748606-11748625 Msa1049010:CDS 35.0%
! TGTTTCTGTAGACAAGTTGA+TGG + chr7_2:11749124-11749143 Msa1049010:three_prime_UTR 35.0%
GAATTTGTCAGCGGCATAAA+AGG - chr7_2:11745996-11746015 None:intergenic 40.0%
! TTATATGGTGGAGAAGTTGG+AGG - chr7_2:11746107-11746126 None:intergenic 40.0%
GAGATCACCATGTTGTGAAA+AGG + chr7_2:11746183-11746202 Msa1049010:CDS 40.0%
TCACCATGTTGTGAAAAGGT+TGG + chr7_2:11746187-11746206 Msa1049010:CDS 40.0%
TTGGTTTAAAGAAAGGGCCA+TGG + chr7_2:11746206-11746225 Msa1049010:CDS 40.0%
TTCTTCCCTCCAAAATGGAT+GGG + chr7_2:11746371-11746390 Msa1049010:intron 40.0%
! TGTATCCCATCCATTTTGGA+GGG - chr7_2:11746379-11746398 None:intergenic 40.0%
!! GCACGAACACTCTTTTGATT+AGG - chr7_2:11746522-11746541 None:intergenic 40.0%
! ATCGTCTACAGTCGACTTTA+TGG - chr7_2:11746553-11746572 None:intergenic 40.0%
!! TTCTCGATCTTTAACGGACT+AGG - chr7_2:11746576-11746595 None:intergenic 40.0%
CTAAGGCCTGATATTAAGAG+GGG + chr7_2:11746662-11746681 Msa1049010:CDS 40.0%
!! TTCATGCATTTTTGGGCAAC+AGG + chr7_2:11746723-11746742 Msa1049010:CDS 40.0%
! AAGAGTGTATACATGGCTCA+TGG - chr7_2:11746968-11746987 None:intergenic 40.0%
CCATGGCATTTAAGAGATTC+TGG - chr7_2:11747299-11747318 None:intergenic 40.0%
CCAGAATCTCTTAAATGCCA+TGG + chr7_2:11747296-11747315 Msa1049010:intron 40.0%
ACGTGGTCCTTAAATGCAAA+AGG + chr7_2:11747425-11747444 Msa1049010:intron 40.0%
!! TTTGGCTTGGTGAGAAAGAA+TGG - chr7_2:11747464-11747483 None:intergenic 40.0%
TCACCAAGCCAAATAGTCAT+TGG + chr7_2:11747471-11747490 Msa1049010:intron 40.0%
GAACCAATGACTATTTGGCT+TGG - chr7_2:11747477-11747496 None:intergenic 40.0%
TGAAAAGTAAGGGCTATTCG+TGG - chr7_2:11747785-11747804 None:intergenic 40.0%
! AAAAATTTAGGGTGAGGGGA+CGG - chr7_2:11747960-11747979 None:intergenic 40.0%
! GACAGGATCAATTCCCATTT+TGG - chr7_2:11748139-11748158 None:intergenic 40.0%
!!! TTTTTTGGCTTGTGTGTGAC+AGG - chr7_2:11748156-11748175 None:intergenic 40.0%
!! GGAATGGTTTTCAGGCAAAA+GGG - chr7_2:11748184-11748203 None:intergenic 40.0%
!! TGGAATGGTTTTCAGGCAAA+AGG - chr7_2:11748185-11748204 None:intergenic 40.0%
! GCATTCTTGGAATGGTTTTC+AGG - chr7_2:11748192-11748211 None:intergenic 40.0%
GATTTGCAGCATTCTTGGAA+TGG - chr7_2:11748200-11748219 None:intergenic 40.0%
GCTAAGATTTGCAGCATTCT+TGG - chr7_2:11748205-11748224 None:intergenic 40.0%
ACTTGAAGCTGAAGCAAGAT+TGG + chr7_2:11748251-11748270 Msa1049010:CDS 40.0%
CAATTGCAACAGCATCAACT+TGG + chr7_2:11748297-11748316 Msa1049010:CDS 40.0%
GTAGATGATGAAGGTTGTGA+TGG - chr7_2:11748342-11748361 None:intergenic 40.0%
AAGAAGAAGGTGAGAAAGAG+TGG + chr7_2:11748394-11748413 Msa1049010:CDS 40.0%
! GGAGAGTGTAATACTTGTGA+TGG + chr7_2:11748600-11748619 Msa1049010:CDS 40.0%
TAGAACATTGGCGAATCAGA+AGG - chr7_2:11748708-11748727 None:intergenic 40.0%
GGCAGAGAAGAATTTGTCAG+CGG - chr7_2:11746005-11746024 None:intergenic 45.0%
GAGAAGTTGGAGGAGAAACT+TGG - chr7_2:11746097-11746116 None:intergenic 45.0%
TGATCTTCCTCAGATGTCCA+TGG - chr7_2:11746226-11746245 None:intergenic 45.0%
AAGAACATGGTCATGGAAGC+TGG + chr7_2:11746266-11746285 Msa1049010:CDS 45.0%
CGTTCTTTGCCTACAAAAGC+TGG + chr7_2:11746289-11746308 Msa1049010:CDS 45.0%
GTTCTTCCCTCCAAAATGGA+TGG + chr7_2:11746370-11746389 Msa1049010:intron 45.0%
! GTGTATCCCATCCATTTTGG+AGG - chr7_2:11746380-11746399 None:intergenic 45.0%
! AGGGTGTATCCCATCCATTT+TGG - chr7_2:11746383-11746402 None:intergenic 45.0%
GTCTGCATTCGTGCTTCATA+GGG - chr7_2:11746402-11746421 None:intergenic 45.0%
TGTCTGCATTCGTGCTTCAT+AGG - chr7_2:11746403-11746422 None:intergenic 45.0%
ATGAAGCACGAATGCAGACA+CGG + chr7_2:11746403-11746422 Msa1049010:intron 45.0%
GTCAGTGTCTGTGTCATGTT+CGG - chr7_2:11746432-11746451 None:intergenic 45.0%
TGAGATTCTTAACCGTGTCG+TGG - chr7_2:11746458-11746477 None:intergenic 45.0%
!! GCATTTTTGGGCAACAGGTT+TGG + chr7_2:11746728-11746747 Msa1049010:intron 45.0%
! TGCTATCACAACCGCAGTTT+TGG + chr7_2:11746880-11746899 Msa1049010:intron 45.0%
GAAAAATGCGGCCAAAACTG+CGG - chr7_2:11746894-11746913 None:intergenic 45.0%
CGGACCGCAAGTTAAAACTA+TGG - chr7_2:11747059-11747078 None:intergenic 45.0%
TGTTCTCTTAGGCAAACGAG+TGG - chr7_2:11748067-11748086 None:intergenic 45.0%
TGCTGCAAATCTTAGCCACA+AGG + chr7_2:11748209-11748228 Msa1049010:CDS 45.0%
ATCTTAGCCACAAGGCTCAA+TGG + chr7_2:11748217-11748236 Msa1049010:CDS 45.0%
TCTTAGCCACAAGGCTCAAT+GGG + chr7_2:11748218-11748237 Msa1049010:CDS 45.0%
GAAGGTGAGAAAGAGTGGAA+AGG + chr7_2:11748399-11748418 Msa1049010:CDS 45.0%
! ACTTGTGATGGAAGTGGTAG+AGG + chr7_2:11748612-11748631 Msa1049010:CDS 45.0%
GTGTGTGGCTTCTTACTTGT+TGG + chr7_2:11749157-11749176 Msa1049010:three_prime_UTR 45.0%
CAACATGGTGATCTCCCCAT+TGG - chr7_2:11746178-11746197 None:intergenic 50.0%
TTTGCAGGACTTGAGAGGTG+TGG + chr7_2:11746608-11746627 Msa1049010:intron 50.0%
GCAAGAGCTGCAGACTAAGA+TGG + chr7_2:11746630-11746649 Msa1049010:CDS 50.0%
CTGCGGTTGTGATAGCATTG+AGG - chr7_2:11746877-11746896 None:intergenic 50.0%
GGTCCTCTCTAGCACAAACT+CGG + chr7_2:11747931-11747950 Msa1049010:intron 50.0%
TGTCCGAGTTTGTGCTAGAG+AGG - chr7_2:11747937-11747956 None:intergenic 50.0%
CACTTTCCCATTGAGCCTTG+TGG - chr7_2:11748227-11748246 None:intergenic 50.0%
! GACAATGATCAGTGCTGCTG+AGG + chr7_2:11748509-11748528 Msa1049010:CDS 50.0%
! AATGATCAGTGCTGCTGAGG+AGG + chr7_2:11748512-11748531 Msa1049010:CDS 50.0%
! ATGATCAGTGCTGCTGAGGA+GGG + chr7_2:11748513-11748532 Msa1049010:CDS 50.0%
! TGTGATGGAAGTGGTAGAGG+CGG + chr7_2:11748615-11748634 Msa1049010:CDS 50.0%
! GTCATTGTCGGTTGAGTGCT+TGG + chr7_2:11749066-11749085 Msa1049010:three_prime_UTR 50.0%
GATGGCAAGACTCAAGTGTG+TGG + chr7_2:11749142-11749161 Msa1049010:three_prime_UTR 50.0%
GAAAGGGCCATGGACATCTG+AGG + chr7_2:11746216-11746235 Msa1049010:CDS 55.0%
GGCTATTCGTGGTTCCGTTC+AGG - chr7_2:11747774-11747793 None:intergenic 55.0%
CGGTGACAAACTCAGGTCAC+CGG - chr7_2:11748571-11748590 None:intergenic 55.0%
CGGTGACCTGAGTTTGTCAC+CGG + chr7_2:11748569-11748588 Msa1049010:CDS 55.0%
CTGAGTTTGTCACCGGAGAG+CGG + chr7_2:11748576-11748595 Msa1049010:CDS 55.0%
TTACACTCTCCACCGCTCTC+CGG - chr7_2:11748591-11748610 None:intergenic 55.0%
GACACTGACACGCCACGACA+CGG + chr7_2:11746443-11746462 Msa1049010:intron 60.0%
CGCTCTCCGGTGACAAACTC+AGG - chr7_2:11748578-11748597 None:intergenic 60.0%
AGTTTGTCACCGGAGAGCGG+TGG + chr7_2:11748579-11748598 Msa1049010:CDS 60.0%
GATGGAAGTGGTAGAGGCGG+TGG + chr7_2:11748618-11748637 Msa1049010:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 11745899 11749220 11745899 ID=Msa1049010;Name=Msa1049010
chr7_2 mRNA 11745899 11749220 11745899 ID=Msa1049010-mRNA-1;Parent=Msa1049010;Name=Msa1049010-mRNA-1;_AED=0.03;_eAED=0.03;_QI=279|1|1|1|1|1|3|492|313
chr7_2 exon 11745899 11746310 11745899 ID=Msa1049010-mRNA-1:exon:2948;Parent=Msa1049010-mRNA-1
chr7_2 exon 11746615 11746744 11746615 ID=Msa1049010-mRNA-1:exon:2949;Parent=Msa1049010-mRNA-1
chr7_2 exon 11748050 11749220 11748050 ID=Msa1049010-mRNA-1:exon:2950;Parent=Msa1049010-mRNA-1
chr7_2 five_prime_UTR 11745899 11746177 11745899 ID=Msa1049010-mRNA-1:five_prime_utr;Parent=Msa1049010-mRNA-1
chr7_2 CDS 11746178 11746310 11746178 ID=Msa1049010-mRNA-1:cds;Parent=Msa1049010-mRNA-1
chr7_2 CDS 11746615 11746744 11746615 ID=Msa1049010-mRNA-1:cds;Parent=Msa1049010-mRNA-1
chr7_2 CDS 11748050 11748728 11748050 ID=Msa1049010-mRNA-1:cds;Parent=Msa1049010-mRNA-1
chr7_2 three_prime_UTR 11748729 11749220 11748729 ID=Msa1049010-mRNA-1:three_prime_utr;Parent=Msa1049010-mRNA-1
Gene Sequence

>Msa1049010

ATGGGGAGATCACCATGTTGTGAAAAGGTTGGTTTAAAGAAAGGGCCATGGACATCTGAGGAAGATCAAAAGCTCTTATCTTACATTGAAGAACATGGTCATGGAAGCTGGCGTTCTTTGCCTACAAAAGCTGGACTTGAGAGGTGTGGCAAGAGCTGCAGACTAAGATGGACTAATTATCTAAGGCCTGATATTAAGAGGGGAAAGTTTAGTGTGCAAGAAGAACAAACCATTATTCAACTTCATGCATTTTTGGGCAACAGGTGGTCATCAATAGCCACTCGTTTGCCTAAGAGAACAGATAATGAAATCAAGAACTATTGGAACACACATCTTAAAAAAAGATTAACCAAAATGGGAATTGATCCTGTCACACACAAGCCAAAAAATGAAACCCTTTTGCCTGAAAACCATTCCAAGAATGCTGCAAATCTTAGCCACAAGGCTCAATGGGAAAGTGCAAGACTTGAAGCTGAAGCAAGATTGGTTAGAGAATCAAAGTTGCGTTCACAATTGCAACAGCATCAACTTGGAAGTAATATTTCTCTTTTTCCATCACAACCTTCATCATCTACATCATCATCTTCAAATCAAGTACTTGGTATTAAAGAAGAAGGTGAGAAAGAGTGGAAAGGTTATGAAGATTCAACACATTTGTTAGAATTCAAAGATTTGATGGAGAATTCATCAATGGCTTTTAGTTCTACATTGCAACATGAGATGACAATGATCAGTGCTGCTGAGGAGGGTTTCACTAATCTCTTGCTTGATAATTCTAACTCCGGTGACCTGAGTTTGTCACCGGAGAGCGGTGGAGAGTGTAATACTTGTGATGGAAGTGGTAGAGGCGGTGGAAGTGATTTCAATGAAGATAACAAGAACTACTGGAACAACATTCTCAATTTAGTTAATTCTTCGCCTTCTGATTCGCCAATGTTCTAA
Protein sequence

>Msa1049010

MGRSPCCEKVGLKKGPWTSEEDQKLLSYIEEHGHGSWRSLPTKAGLERCGKSCRLRWTNYLRPDIKRGKFSVQEEQTIIQLHAFLGNRWSSIATRLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNETLLPENHSKNAANLSHKAQWESARLEAEARLVRESKLRSQLQQHQLGSNISLFPSQPSSSTSSSSNQVLGIKEEGEKEWKGYEDSTHLLEFKDLMENSSMAFSSTLQHEMTMISAAEEGFTNLLLDNSNSGDLSLSPESGGECNTCDGSGRGGGSDFNEDNKNYWNNILNLVNSSPSDSPMF*