AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0012060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012060 MtrunA17_Chr1g0161061 77.665 197 2 1 3 157 1 197 7.40e-106 300
Msa0012060 MtrunA17_Chr1g0161051 46.829 205 55 2 3 153 1 205 1.06e-61 189
Msa0012060 MtrunA17_Chr1g0186321 40.909 198 73 3 1 154 38 235 5.80e-44 145
Msa0012060 MtrunA17_Chr7g0274451 40.884 181 64 2 11 148 51 231 2.62e-39 133
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012060 AT1G70670.1 52.284 197 48 2 3 157 1 193 3.05e-64 195
Msa0012060 AT1G70680.1 49.741 193 52 2 3 153 1 190 9.77e-59 181
Msa0012060 AT2G33380.2 50.649 154 76 0 2 155 39 192 7.82e-52 164
Msa0012060 AT1G23240.1 41.270 189 69 1 1 147 6 194 3.43e-48 155
Msa0012060 AT1G23240.3 44.910 167 50 1 23 147 2 168 2.66e-47 152
Msa0012060 AT1G23240.4 43.750 176 57 1 14 147 28 203 1.79e-46 151
Msa0012060 AT2G33380.1 39.796 196 76 1 2 155 39 234 2.65e-43 143
Msa0012060 AT1G70680.2 46.053 152 40 1 44 153 5 156 2.35e-40 133
Msa0012060 AT5G55240.1 42.373 177 60 1 23 157 64 240 2.27e-39 133
Msa0012060 AT4G26740.1 39.548 177 65 1 23 157 65 241 2.27e-36 125
Msa0012060 AT1G23240.2 56.701 97 42 0 14 110 28 124 1.49e-35 122
Msa0012060 AT5G29560.1 50.505 99 48 1 11 108 50 148 5.71e-30 107

Find 43 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATTCACATTGTGAAATT+AGG 0.180625 1_1:-18140712 Msa0012060:three_prime_UTR
GATACCTCCATTGTTGTTTG+TGG 0.360918 1_1:+18145083 None:intergenic
ATTGCAGGATTTCGAGCAAT+AGG 0.392561 1_1:-18144648 Msa0012060:intron
AAGAATGAAACGCAAGTATT+GGG 0.419851 1_1:-18145332 Msa0012060:five_prime_UTR
GGTGGTGTGAACCTGGGAAT+TGG 0.427291 1_1:+18145286 None:intergenic
TTTCTAATAAAGAAAGAATC+TGG 0.433380 1_1:-18145359 None:intergenic
GTATGTTCTTTGCAAAGATA+AGG 0.436174 1_1:-18140839 Msa0012060:CDS
AAAGAATGAAACGCAAGTAT+TGG 0.443850 1_1:-18145333 Msa0012060:five_prime_UTR
GGATTTCGAGCAATAGGTTG+TGG 0.448792 1_1:-18144642 Msa0012060:CDS
ACCATCCGTGCTGTTTATGA+TGG 0.451685 1_1:-18140796 Msa0012060:CDS
TAGACACTGTGATATTCCTA+TGG 0.454164 1_1:-18140609 Msa0012060:three_prime_UTR
TCTACTGGTAGAAAGATAGA+TGG 0.462239 1_1:+18141579 None:intergenic
CTCTCTGCATCAAATACCTA+TGG 0.466877 1_1:-18145127 Msa0012060:exon
TGGGAGTCTGTTTGAACGTA+TGG 0.510529 1_1:-18140776 Msa0012060:CDS
GCAAAACATGGAAGTGACTC+TGG 0.513495 1_1:-18141537 Msa0012060:CDS
GGCTTGCTAGCTACTCAGAA+TGG 0.514733 1_1:-18140870 Msa0012060:CDS
TCTGTTTGAACGTATGGAAA+AGG 0.526693 1_1:-18140770 Msa0012060:CDS
TTACCTTGAAATGTTTCCCA+TGG 0.539532 1_1:+18144856 None:intergenic
GCATCAAATACCTATGGCTA+TGG 0.548139 1_1:-18145121 Msa0012060:exon
TACCCATGGGAAACATTTCA+AGG 0.559067 1_1:-18144859 Msa0012060:intron
GTTCTTTGCAAAGATAAGGA+TGG 0.560495 1_1:-18140835 Msa0012060:CDS
TACCTTGAAATGTTTCCCAT+GGG 0.569151 1_1:+18144857 None:intergenic
TCTTAGCCAGAAAACTCGCC+CGG 0.569182 1_1:-18144577 Msa0012060:intron
ATGGGTAGACGATGCCATCA+TGG 0.570109 1_1:+18144875 None:intergenic
GTTGTTTGTGGTAGAAGATG+AGG 0.581998 1_1:+18145095 None:intergenic
AACATGTTGCATTCTTCGAT+AGG 0.582799 1_1:-18144900 Msa0012060:CDS
CCATCCGTGCTGTTTATGAT+GGG 0.583814 1_1:-18140795 Msa0012060:CDS
GATGAGGTTGCCATAGCCAT+AGG 0.584139 1_1:+18145111 None:intergenic
CCCATCATAAACAGCACGGA+TGG 0.584800 1_1:+18140795 None:intergenic
CTATGGGTATGTTGTGAGTG+TGG 0.594869 1_1:-18140592 Msa0012060:three_prime_UTR
CAGATATCAAACCAATTCCC+AGG 0.598605 1_1:-18145297 Msa0012060:intron
AGACACTGTGATATTCCTAT+GGG 0.599718 1_1:-18140608 Msa0012060:three_prime_UTR
ATGATGGCATCGTCTACCCA+TGG 0.600207 1_1:-18144873 Msa0012060:CDS
TCTTCTACCACAAACAACAA+TGG 0.603571 1_1:-18145090 Msa0012060:CDS
CTAATAAAGAAAGAATCTGG+TGG 0.605049 1_1:-18145356 None:intergenic
TTCTTCGATAGGAACCATGA+TGG 0.613602 1_1:-18144889 Msa0012060:CDS
TGATGGCATCGTCTACCCAT+GGG 0.621283 1_1:-18144872 Msa0012060:CDS
GTGTCTATGATAACGAAGGA+AGG 0.635393 1_1:-18141515 Msa0012060:intron
AACATAACGAAAGCAAAACA+TGG 0.639860 1_1:-18141549 Msa0012060:CDS
CACACTCACAACATACCCAT+AGG 0.645185 1_1:+18140593 None:intergenic
GACTCCCATCATAAACAGCA+CGG 0.654325 1_1:+18140791 None:intergenic
TCTACCACAAACAACAATGG+AGG 0.671362 1_1:-18145087 Msa0012060:intron
TCTGGTGTCTATGATAACGA+AGG 0.694666 1_1:-18141519 Msa0012060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATAAATAAATAAAA+AGG + chr1_1:18140830-18140849 None:intergenic 0.0%
!! AATAAAAAGGAAATATAAAA+AGG + chr1_1:18140817-18140836 None:intergenic 10.0%
!!! TAATGTTTAACTTTTTTTTT+TGG + chr1_1:18141820-18141839 None:intergenic 10.0%
!! AAAAAAAAAAGTTAAACATT+AGG - chr1_1:18141819-18141838 Msa0012060:intron 10.0%
!!! ATCTAATTTTTTTTTTTTTG+TGG + chr1_1:18143042-18143061 None:intergenic 10.0%
!! TTAGTTAAAATATATATTGT+AGG - chr1_1:18143069-18143088 Msa0012060:intron 10.0%
!!! AAAAAAAATGATATAAGTTT+TGG + chr1_1:18143183-18143202 None:intergenic 10.0%
!! AAATCTACATAATTATATTA+AGG + chr1_1:18143950-18143969 None:intergenic 10.0%
!!! ATTCTTATGATTTTTAAAAT+CGG - chr1_1:18144820-18144839 Msa0012060:intron 10.0%
!! GATAAATATAGTATATATAT+GGG + chr1_1:18144902-18144921 None:intergenic 10.0%
!!! GATGGAATTTTTTATTTTTA+TGG + chr1_1:18141082-18141101 None:intergenic 15.0%
!! AATTAAATCACAAAAACATA+TGG + chr1_1:18141408-18141427 None:intergenic 15.0%
!! TCTTAATAATAGTTATCTTA+AGG + chr1_1:18141487-18141506 None:intergenic 15.0%
!!! AAAAATATTTAATCCTTTTG+TGG - chr1_1:18141879-18141898 Msa0012060:intron 15.0%
!! AATAAAAATGAATATGTATC+TGG + chr1_1:18142090-18142109 None:intergenic 15.0%
!!! TTAAAATATCATGCTTTTAA+TGG - chr1_1:18142121-18142140 Msa0012060:intron 15.0%
!!! TAAAATATCATGCTTTTAAT+GGG - chr1_1:18142122-18142141 Msa0012060:intron 15.0%
!!! AGAAAATTAATCATTTTACT+TGG - chr1_1:18143538-18143557 Msa0012060:intron 15.0%
!! CTAGTTATTTAAAAATAAGA+TGG - chr1_1:18144145-18144164 Msa0012060:intron 15.0%
!! AAAATTTCTTCAAATATTGA+AGG + chr1_1:18144469-18144488 None:intergenic 15.0%
!! CGATAAATATAGTATATATA+TGG + chr1_1:18144903-18144922 None:intergenic 15.0%
!!! TATGATAATGATGATTATGA+TGG + chr1_1:18140600-18140619 None:intergenic 20.0%
!!! TGATATTGATTATATAGAGA+TGG + chr1_1:18140633-18140652 None:intergenic 20.0%
!! TGTGTTGTATATTTGTAAAA+AGG + chr1_1:18141323-18141342 None:intergenic 20.0%
!!! TTTTACAAATATACAACACA+TGG - chr1_1:18141323-18141342 Msa0012060:intron 20.0%
!!! TTACTTTAAAGTTAACCATT+AGG - chr1_1:18141788-18141807 Msa0012060:intron 20.0%
!! GATGTATTAACAAACAAAAA+TGG - chr1_1:18141905-18141924 Msa0012060:intron 20.0%
!!! ATGGATTATATTAACACTAA+AGG - chr1_1:18141924-18141943 Msa0012060:intron 20.0%
!! GTTTAATTCCTACTTAAATT+TGG + chr1_1:18142149-18142168 None:intergenic 20.0%
!!! CTCAAAATTTATCAATTTTC+TGG - chr1_1:18142168-18142187 Msa0012060:intron 20.0%
!! CTCTATTTAAGAAAAAAGTT+TGG + chr1_1:18142401-18142420 None:intergenic 20.0%
!!! ATAGGTTTTAAAAAAAACCT+AGG + chr1_1:18142428-18142447 None:intergenic 20.0%
!!! TAAAACCTATTTAGCTTAAA+AGG - chr1_1:18142438-18142457 Msa0012060:intron 20.0%
!! TAAAGATGTTCATAAGATAT+AGG - chr1_1:18142782-18142801 Msa0012060:intron 20.0%
!!! TCTTAGGCTTTAAAAAAATA+TGG - chr1_1:18142892-18142911 Msa0012060:intron 20.0%
!! TCTAAATAACTCAGTTTATA+AGG - chr1_1:18143298-18143317 Msa0012060:intron 20.0%
!!! ACTACGATTTTTTTTTTTGA+AGG + chr1_1:18143392-18143411 None:intergenic 20.0%
!!! GTAAAATGATTAATTTTCTC+TGG + chr1_1:18143537-18143556 None:intergenic 20.0%
!!! ATTATATTAAGGCTTTGTTT+GGG + chr1_1:18143939-18143958 None:intergenic 20.0%
!!! AATTATATTAAGGCTTTGTT+TGG + chr1_1:18143940-18143959 None:intergenic 20.0%
!!! AGCATAAGCAAATTTTATTA+TGG + chr1_1:18144213-18144232 None:intergenic 20.0%
!!! TTTATATTTTATGATGGTGT+AGG - chr1_1:18144252-18144271 Msa0012060:intron 20.0%
!!! TTATATTTTATGATGGTGTA+GGG - chr1_1:18144253-18144272 Msa0012060:intron 20.0%
!!! GTTATGTTTTTAATTTCTAC+TGG + chr1_1:18144301-18144320 None:intergenic 20.0%
!!! TGTGTATTATAGTCATTTTA+AGG - chr1_1:18144387-18144406 Msa0012060:intron 20.0%
!!! ATAGTTAGATTGTGAATTTT+AGG - chr1_1:18144437-18144456 Msa0012060:intron 20.0%
!! CAATTTAAAAAGAGAAGATA+TGG - chr1_1:18144685-18144704 Msa0012060:intron 20.0%
!!! TGCATCCTTTATTTTATTTT+TGG - chr1_1:18144738-18144757 Msa0012060:intron 20.0%
!! TGCAACCAAAAATAAAATAA+AGG + chr1_1:18144746-18144765 None:intergenic 20.0%
!! TGTTTATATACTAGAAAACA+TGG + chr1_1:18144773-18144792 None:intergenic 20.0%
!! AAAAGAAATTTTGAATGCTG+GGG + chr1_1:18140709-18140728 None:intergenic 25.0%
!! GAAAAGAAATTTTGAATGCT+GGG + chr1_1:18140710-18140729 None:intergenic 25.0%
!! AGAAAAGAAATTTTGAATGC+TGG + chr1_1:18140711-18140730 None:intergenic 25.0%
!!! TAGTTTTGTAGAGAGATATA+TGG - chr1_1:18141155-18141174 Msa0012060:intron 25.0%
!!! GCAGCTATTTTCATAAATTT+TGG - chr1_1:18141262-18141281 Msa0012060:intron 25.0%
!!! TAGTCGAACTTTTTTTTTTG+AGG - chr1_1:18141358-18141377 Msa0012060:intron 25.0%
!!! AGTCGAACTTTTTTTTTTGA+GGG - chr1_1:18141359-18141378 Msa0012060:intron 25.0%
! TTTAGGAGAAATAAACTCTT+AGG - chr1_1:18141448-18141467 Msa0012060:intron 25.0%
! TATCTTAAGGACTAATCTTA+AGG + chr1_1:18141474-18141493 None:intergenic 25.0%
! TAAACAAAAGATTCATGTTG+AGG - chr1_1:18141513-18141532 Msa0012060:intron 25.0%
! AACGAATACGTATAAAAAAC+AGG - chr1_1:18141576-18141595 Msa0012060:CDS 25.0%
! GTGCAATAATAATTGGTATA+AGG - chr1_1:18141654-18141673 Msa0012060:intron 25.0%
! GATTATATTAACACTAAAGG+AGG - chr1_1:18141927-18141946 Msa0012060:intron 25.0%
! TTCATCTTACTTAAATATGC+CGG + chr1_1:18142506-18142525 None:intergenic 25.0%
!! ATAATCAACACGAAGTTTTA+GGG + chr1_1:18142692-18142711 None:intergenic 25.0%
! CAATGTGATCTAAGTTTAAA+TGG + chr1_1:18142756-18142775 None:intergenic 25.0%
!! TAAGATATAGGCTTTTAAAC+AGG - chr1_1:18142794-18142813 Msa0012060:intron 25.0%
!!! ATTTTTTTAAAGCCTAAGAC+TGG + chr1_1:18142891-18142910 None:intergenic 25.0%
!!! ATACTTTGATGATTTTGACA+AGG - chr1_1:18143330-18143349 Msa0012060:intron 25.0%
! CAATCTCTTACAATCATAAT+AGG - chr1_1:18143428-18143447 Msa0012060:intron 25.0%
! GAGGAACTAAAAAATTGTAT+TGG - chr1_1:18143711-18143730 Msa0012060:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG - chr1_1:18143714-18143733 Msa0012060:intron 25.0%
! TAAAAAATTGTATTGGAGGA+GGG - chr1_1:18143718-18143737 Msa0012060:intron 25.0%
! TTCAACAAAGATAGAAAACT+TGG + chr1_1:18144060-18144079 None:intergenic 25.0%
!! ATAAAATTTGCTTATGCTGT+TGG - chr1_1:18144215-18144234 Msa0012060:intron 25.0%
!! TTTAACTTCTGATGAATTGA+TGG - chr1_1:18144519-18144538 Msa0012060:intron 25.0%
! TTAACTTCTGATGAATTGAT+GGG - chr1_1:18144520-18144539 Msa0012060:intron 25.0%
! AACTTCGTATCAATATATCA+TGG + chr1_1:18144640-18144659 None:intergenic 25.0%
!! AATTGTCATTTATCGTTAAG+CGG + chr1_1:18144670-18144689 None:intergenic 25.0%
! ATCATAAGAATGAAACTATG+TGG + chr1_1:18144811-18144830 None:intergenic 25.0%
! ACTATTCACATTGTGAAATT+AGG - chr1_1:18145150-18145169 Msa0012060:five_prime_UTR 25.0%
AAAGAATGAAACGCAAGTAT+TGG - chr1_1:18140529-18140548 Msa0012060:three_prime_UTR 30.0%
AAGAATGAAACGCAAGTATT+GGG - chr1_1:18140530-18140549 Msa0012060:three_prime_UTR 30.0%
GATAATGATGATTATGATGG+TGG + chr1_1:18140597-18140616 None:intergenic 30.0%
CGGTTTAAATGAGAAGAAAA+CGG + chr1_1:18141109-18141128 None:intergenic 30.0%
TATCTCTCTACAAAACTACA+AGG + chr1_1:18141153-18141172 None:intergenic 30.0%
ACCAAAATAAATCTCATGCA+TGG - chr1_1:18141182-18141201 Msa0012060:intron 30.0%
! ACCATGCATGAGATTTATTT+TGG + chr1_1:18141186-18141205 None:intergenic 30.0%
AAAAAGGAAGAGAGAAATAC+CGG + chr1_1:18141307-18141326 None:intergenic 30.0%
! TGCCAATGCACTTATATTTT+AGG - chr1_1:18141431-18141450 Msa0012060:intron 30.0%
CTCCTAAAATATAAGTGCAT+TGG + chr1_1:18141436-18141455 None:intergenic 30.0%
ATTCGTTTGTTCATTGGAAT+CGG + chr1_1:18141563-18141582 None:intergenic 30.0%
ATACGTATTCGTTTGTTCAT+TGG + chr1_1:18141569-18141588 None:intergenic 30.0%
AAAAAACAGGAAATGTGAAG+TGG - chr1_1:18141589-18141608 Msa0012060:CDS 30.0%
! TGGGTTTATCTTTATGCTTT+TGG - chr1_1:18141632-18141651 Msa0012060:intron 30.0%
!! GCTTTTGGTGCAATAATAAT+TGG - chr1_1:18141647-18141666 Msa0012060:intron 30.0%
AAAAAAGCCATGCCATTAAT+AGG - chr1_1:18141729-18141748 Msa0012060:intron 30.0%
!!! TTTTTTTGGTAGAGTCCTAA+TGG + chr1_1:18141806-18141825 None:intergenic 30.0%
!!! TGCCTGCAATATTTTTTTGA+AGG - chr1_1:18141854-18141873 Msa0012060:intron 30.0%
!!! GCCTGCAATATTTTTTTGAA+GGG - chr1_1:18141855-18141874 Msa0012060:intron 30.0%
TCCCTTCAAAAAAATATTGC+AGG + chr1_1:18141859-18141878 None:intergenic 30.0%
TTAATACATCGTTCCACAAA+AGG + chr1_1:18141895-18141914 None:intergenic 30.0%
!! ACTTTGTTGTAAACTTTTGC+GGG + chr1_1:18141962-18141981 None:intergenic 30.0%
!! GACTTTGTTGTAAACTTTTG+CGG + chr1_1:18141963-18141982 None:intergenic 30.0%
TAATGGGACCAAATTTAAGT+AGG - chr1_1:18142138-18142157 Msa0012060:intron 30.0%
!! TTGAAGTGTTGATAAGCAAT+AGG - chr1_1:18142240-18142259 Msa0012060:intron 30.0%
AAATGACCTCTTATCTCATA+TGG + chr1_1:18142292-18142311 None:intergenic 30.0%
TTCTTAAATAGAGAAGACCT+AGG - chr1_1:18142408-18142427 Msa0012060:intron 30.0%
! AAAAGCCTTTTAAGCCTATT+AGG - chr1_1:18142480-18142499 Msa0012060:intron 30.0%
! GATAATCAACACGAAGTTTT+AGG + chr1_1:18142693-18142712 None:intergenic 30.0%
!! AGGCTTTAAAAAAATATGGC+AGG - chr1_1:18142896-18142915 Msa0012060:intron 30.0%
!!! ATAAGTTTTGGTTCCTTGAA+CGG + chr1_1:18143171-18143190 None:intergenic 30.0%
GTCATTCATTTGATTGATTG+TGG + chr1_1:18143266-18143285 None:intergenic 30.0%
!! TTTGATGATTTTGACAAGGA+AGG - chr1_1:18143334-18143353 Msa0012060:intron 30.0%
TTGAAGGTAAACTATATCTC+AGG + chr1_1:18143376-18143395 None:intergenic 30.0%
! ATCATTTTACTTGGTCTCTT+AGG - chr1_1:18143547-18143566 Msa0012060:intron 30.0%
TGGAAGAAATAGAGGAAAAA+GGG - chr1_1:18143631-18143650 Msa0012060:intron 30.0%
!!! TTTTTTAGTTCCTCCAAATG+AGG + chr1_1:18143705-18143724 None:intergenic 30.0%
CTAAAAAATTGTATTGGAGG+AGG - chr1_1:18143717-18143736 Msa0012060:intron 30.0%
AACATAACGAAAGCAAAACA+TGG - chr1_1:18144313-18144332 Msa0012060:intron 30.0%
! CATCAGAAGTTAAAGCATTT+GGG + chr1_1:18144513-18144532 None:intergenic 30.0%
! TCATCAGAAGTTAAAGCATT+TGG + chr1_1:18144514-18144533 None:intergenic 30.0%
TAACTTCTGATGAATTGATG+GGG - chr1_1:18144521-18144540 Msa0012060:intron 30.0%
!!! TTTTAAAATCGGTTCTCGTT+CGG - chr1_1:18144831-18144850 Msa0012060:intron 30.0%
ATATATATGGGTGCTTCTAA+TGG + chr1_1:18144890-18144909 None:intergenic 30.0%
!! ATTGTTGCGATTTGATTTTC+AGG - chr1_1:18144971-18144990 Msa0012060:intron 30.0%
GTATGTTCTTTGCAAAGATA+AGG - chr1_1:18145023-18145042 Msa0012060:intron 30.0%
GGAGAGGAAACAAAATAAGA+GGG + chr1_1:18140683-18140702 None:intergenic 35.0%
TGGAGAGGAAACAAAATAAG+AGG + chr1_1:18140684-18140703 None:intergenic 35.0%
! AAATTTTGAATGCTGGGGAA+TGG + chr1_1:18140704-18140723 None:intergenic 35.0%
TCTTCTACCACAAACAACAA+TGG - chr1_1:18140772-18140791 Msa0012060:CDS 35.0%
AACATGTTGCATTCTTCGAT+AGG - chr1_1:18140962-18140981 Msa0012060:intron 35.0%
TACCTTGAAATGTTTCCCAT+GGG + chr1_1:18141008-18141027 None:intergenic 35.0%
TTACCTTGAAATGTTTCCCA+TGG + chr1_1:18141009-18141028 None:intergenic 35.0%
AAAAGGAAGAGAGAAATACC+GGG + chr1_1:18141306-18141325 None:intergenic 35.0%
ACAAAAGATTCATGTTGAGG+AGG - chr1_1:18141516-18141535 Msa0012060:CDS 35.0%
AATAGGAATCAGATTCCTGA+TGG - chr1_1:18141612-18141631 Msa0012060:intron 35.0%
ATAGGAATCAGATTCCTGAT+GGG - chr1_1:18141613-18141632 Msa0012060:intron 35.0%
AGCATAAAGATAAACCCATC+AGG + chr1_1:18141630-18141649 None:intergenic 35.0%
! GCCAAAAACAACACACATTT+TGG - chr1_1:18141985-18142004 Msa0012060:intron 35.0%
!!! GCCAAAATGTGTGTTGTTTT+TGG + chr1_1:18141989-18142008 None:intergenic 35.0%
TTGGTCAAGGTTATCACATA+TGG + chr1_1:18142052-18142071 None:intergenic 35.0%
!! ACGCATATTCATTTTGGTCA+AGG + chr1_1:18142065-18142084 None:intergenic 35.0%
TCAATTATTGCTGTGGAAAG+AGG + chr1_1:18142224-18142243 None:intergenic 35.0%
CAACACTTCAATTATTGCTG+TGG + chr1_1:18142231-18142250 None:intergenic 35.0%
AACACACCATATGAGATAAG+AGG - chr1_1:18142283-18142302 Msa0012060:intron 35.0%
!! TCTGGCCTTTTAAGCTAAAT+AGG + chr1_1:18142446-18142465 None:intergenic 35.0%
TTAAAAAAATATGGCAGGCC+AGG - chr1_1:18142901-18142920 Msa0012060:intron 35.0%
CAAATCATGACCTCTTTGTA+GGG + chr1_1:18142969-18142988 None:intergenic 35.0%
ATCATTGAGACAACAATCTG+CGG - chr1_1:18142994-18143013 Msa0012060:intron 35.0%
AAAACTTTGTATCCCGTTCA+AGG - chr1_1:18143155-18143174 Msa0012060:intron 35.0%
!!! TAAGTTTTGGTTCCTTGAAC+GGG + chr1_1:18143170-18143189 None:intergenic 35.0%
GGAAAAAAGGAATGAGTAAG+TGG - chr1_1:18143611-18143630 Msa0012060:intron 35.0%
TGAGTAAGTGGAAGAAATAG+AGG - chr1_1:18143623-18143642 Msa0012060:intron 35.0%
GTGGAAGAAATAGAGGAAAA+AGG - chr1_1:18143630-18143649 Msa0012060:intron 35.0%
TCTACTGGTAGAAAGATAGA+TGG + chr1_1:18144286-18144305 None:intergenic 35.0%
TACCATCCTTTGTAATCCTT+AGG + chr1_1:18144568-18144587 None:intergenic 35.0%
GAAACTATGTGGTCTATCAT+TGG + chr1_1:18144800-18144819 None:intergenic 35.0%
!!! TAAAGTCTTTTTTCCTCGTC+TGG + chr1_1:18144867-18144886 None:intergenic 35.0%
GTTCTTTGCAAAGATAAGGA+TGG - chr1_1:18145027-18145046 Msa0012060:intron 35.0%
TCTGTTTGAACGTATGGAAA+AGG - chr1_1:18145092-18145111 Msa0012060:CDS 35.0%
TAGACACTGTGATATTCCTA+TGG - chr1_1:18145253-18145272 Msa0012060:intron 35.0%
AGACACTGTGATATTCCTAT+GGG - chr1_1:18145254-18145273 Msa0012060:intron 35.0%
CAGATATCAAACCAATTCCC+AGG - chr1_1:18140565-18140584 Msa0012060:three_prime_UTR 40.0%
CTCTCTGCATCAAATACCTA+TGG - chr1_1:18140735-18140754 Msa0012060:exon 40.0%
GCATCAAATACCTATGGCTA+TGG - chr1_1:18140741-18140760 Msa0012060:CDS 40.0%
GTTGTTTGTGGTAGAAGATG+AGG + chr1_1:18140770-18140789 None:intergenic 40.0%
TCTACCACAAACAACAATGG+AGG - chr1_1:18140775-18140794 Msa0012060:CDS 40.0%
!! GATACCTCCATTGTTGTTTG+TGG + chr1_1:18140782-18140801 None:intergenic 40.0%
TTCTTCGATAGGAACCATGA+TGG - chr1_1:18140973-18140992 Msa0012060:intron 40.0%
TACCCATGGGAAACATTTCA+AGG - chr1_1:18141003-18141022 Msa0012060:intron 40.0%
TGAGAAGAAAACGGTTCAGA+TGG + chr1_1:18141100-18141119 None:intergenic 40.0%
ATTGCAGGATTTCGAGCAAT+AGG - chr1_1:18141214-18141233 Msa0012060:intron 40.0%
CAGGAAATGTGAAGTGGAAT+AGG - chr1_1:18141595-18141614 Msa0012060:intron 40.0%
CACATGCTTCAGCTTTACTT+TGG + chr1_1:18141699-18141718 None:intergenic 40.0%
AAAGCCATGCCATTAATAGG+AGG - chr1_1:18141732-18141751 Msa0012060:intron 40.0%
AGATCCTCCTATTAATGGCA+TGG + chr1_1:18141739-18141758 None:intergenic 40.0%
!! TCGAGCTTGTTGGTTTGTTT+GGG + chr1_1:18142026-18142045 None:intergenic 40.0%
GTCAAGGTTATCACATATGG+TGG + chr1_1:18142049-18142068 None:intergenic 40.0%
! CTGGCAACGCATATTCATTT+TGG + chr1_1:18142071-18142090 None:intergenic 40.0%
! ATATGGTGTGTTGCACGTTT+TGG + chr1_1:18142275-18142294 None:intergenic 40.0%
AAGAGGTCATTTCCCCAAAA+AGG - chr1_1:18142300-18142319 Msa0012060:intron 40.0%
! TCCCTCTTTGTCTCCTTTTT+GGG + chr1_1:18142316-18142335 None:intergenic 40.0%
! ATCCCTCTTTGTCTCCTTTT+TGG + chr1_1:18142317-18142336 None:intergenic 40.0%
AAAAAGGAGACAAAGAGGGA+TGG - chr1_1:18142316-18142335 Msa0012060:intron 40.0%
AAAAGGAGACAAAGAGGGAT+GGG - chr1_1:18142317-18142336 Msa0012060:intron 40.0%
!! GGCTTAAAAGGCTTTTTGAG+AGG + chr1_1:18142476-18142495 None:intergenic 40.0%
CTTAAATATGCCGGCCTAAT+AGG + chr1_1:18142497-18142516 None:intergenic 40.0%
! AGGCTTTTAAACAGGCTAGT+AGG - chr1_1:18142802-18142821 Msa0012060:intron 40.0%
CCTAAAAAGTAGGCCTATGA+CGG - chr1_1:18142857-18142876 Msa0012060:intron 40.0%
CTAAAAAGTAGGCCTATGAC+GGG - chr1_1:18142858-18142877 Msa0012060:intron 40.0%
CCAAATCATGACCTCTTTGT+AGG + chr1_1:18142970-18142989 None:intergenic 40.0%
CCTACAAAGAGGTCATGATT+TGG - chr1_1:18142967-18142986 Msa0012060:intron 40.0%
!! TTAGGCTTTGTTTGCGAGTT+TGG - chr1_1:18143565-18143584 Msa0012060:intron 40.0%
GAAATAGAGGAAAAAGGGAG+AGG - chr1_1:18143636-18143655 Msa0012060:intron 40.0%
GATACAAAACCCTCCTCATT+TGG - chr1_1:18143689-18143708 Msa0012060:intron 40.0%
TTAGTTCCTCCAAATGAGGA+GGG + chr1_1:18143701-18143720 None:intergenic 40.0%
! TTTAGTTCCTCCAAATGAGG+AGG + chr1_1:18143702-18143721 None:intergenic 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - chr1_1:18143724-18143743 Msa0012060:intron 40.0%
! TTTGAGGGGTGCAAAATATG+AGG + chr1_1:18143889-18143908 None:intergenic 40.0%
! AAGGAAAGGAAAGGCTTTGA+GGG + chr1_1:18143904-18143923 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG + chr1_1:18143932-18143951 None:intergenic 40.0%
! TCTGGTGTCTATGATAACGA+AGG - chr1_1:18144343-18144362 Msa0012060:intron 40.0%
! GTGTCTATGATAACGAAGGA+AGG - chr1_1:18144347-18144366 Msa0012060:intron 40.0%
GTAATCCTTAGGCTCTCTAT+TGG + chr1_1:18144557-18144576 None:intergenic 40.0%
AGAGAGCCTAAGGATTACAA+AGG - chr1_1:18144559-18144578 Msa0012060:intron 40.0%
AGCCTAAGGATTACAAAGGA+TGG - chr1_1:18144563-18144582 Msa0012060:intron 40.0%
! TGTCATTTATCGTTAAGCGG+TGG + chr1_1:18144667-18144686 None:intergenic 40.0%
!!! TCTTTTTTCCTCGTCTGGAT+GGG + chr1_1:18144862-18144881 None:intergenic 40.0%
!! TATGATGGTGGTGTGAACCT+GGG + chr1_1:18140585-18140604 None:intergenic 45.0%
!! TTATGATGGTGGTGTGAACC+TGG + chr1_1:18140586-18140605 None:intergenic 45.0%
GCTCGAAATCCTGCAATCAA+GGG + chr1_1:18141211-18141230 None:intergenic 45.0%
TGCTCGAAATCCTGCAATCA+AGG + chr1_1:18141212-18141231 None:intergenic 45.0%
GGATTTCGAGCAATAGGTTG+TGG - chr1_1:18141220-18141239 Msa0012060:intron 45.0%
GCTTCAGCTTTACTTTGGCA+TGG + chr1_1:18141694-18141713 None:intergenic 45.0%
GCTGCAGATCCTCCTATTAA+TGG + chr1_1:18141744-18141763 None:intergenic 45.0%
TTAATAGGAGGATCTGCAGC+AGG - chr1_1:18141744-18141763 Msa0012060:intron 45.0%
!! GTCGAGCTTGTTGGTTTGTT+TGG + chr1_1:18142027-18142046 None:intergenic 45.0%
TGTGGAAAGAGGATGACTGA+TGG + chr1_1:18142213-18142232 None:intergenic 45.0%
TCCCCAAAAAGGAGACAAAG+AGG - chr1_1:18142311-18142330 Msa0012060:intron 45.0%
! CCCTCTTTGTCTCCTTTTTG+GGG + chr1_1:18142315-18142334 None:intergenic 45.0%
CCCCAAAAAGGAGACAAAGA+GGG - chr1_1:18142312-18142331 Msa0012060:intron 45.0%
AGACAAAGAGGGATGGGAAT+AGG - chr1_1:18142323-18142342 Msa0012060:intron 45.0%
GAAAAAAGTTTGGCCTAGCC+TGG + chr1_1:18142391-18142410 None:intergenic 45.0%
!! TTTTTGAGAGGCATGTGGTC+TGG + chr1_1:18142464-18142483 None:intergenic 45.0%
!! AAGGCTTTTTGAGAGGCATG+TGG + chr1_1:18142469-18142488 None:intergenic 45.0%
! GCCTTTTAAGCCTATTAGGC+CGG - chr1_1:18142484-18142503 Msa0012060:intron 45.0%
!!! CCGTCATAGGCCTACTTTTT+AGG + chr1_1:18142860-18142879 None:intergenic 45.0%
TAAAGCCTAAGACTGGCATG+CGG + chr1_1:18142884-18142903 None:intergenic 45.0%
CTCTTTGTAGGGATGGGAAT+AGG + chr1_1:18142958-18142977 None:intergenic 45.0%
CTATTCCCATCCCTACAAAG+AGG - chr1_1:18142956-18142975 Msa0012060:intron 45.0%
CATGACCTCTTTGTAGGGAT+GGG + chr1_1:18142964-18142983 None:intergenic 45.0%
TCATGACCTCTTTGTAGGGA+TGG + chr1_1:18142965-18142984 None:intergenic 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - chr1_1:18143569-18143588 Msa0012060:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr1_1:18143570-18143589 Msa0012060:intron 45.0%
ATAGAGGAAAAAGGGAGAGG+AGG - chr1_1:18143639-18143658 Msa0012060:intron 45.0%
TAGAGGAAAAAGGGAGAGGA+GGG - chr1_1:18143640-18143659 Msa0012060:intron 45.0%
! AAAAAGGGAGAGGAGGGTTT+TGG - chr1_1:18143646-18143665 Msa0012060:intron 45.0%
! AAAAGGGAGAGGAGGGTTTT+GGG - chr1_1:18143647-18143666 Msa0012060:intron 45.0%
ACAAAACCCTCCTCATTTGG+AGG - chr1_1:18143692-18143711 Msa0012060:intron 45.0%
!!! TATTGGAGGAGGGTTTTGGA+GGG - chr1_1:18143728-18143747 Msa0012060:intron 45.0%
!! AGGAAAGGAAAGGCTTTGAG+GGG + chr1_1:18143903-18143922 None:intergenic 45.0%
GAAGGAAAGGAAAGGCTTTG+AGG + chr1_1:18143905-18143924 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr1_1:18143927-18143946 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr1_1:18143928-18143947 None:intergenic 45.0%
GCAAAACATGGAAGTGACTC+TGG - chr1_1:18144325-18144344 Msa0012060:intron 45.0%
!!! GTCTTTTTTCCTCGTCTGGA+TGG + chr1_1:18144863-18144882 None:intergenic 45.0%
!! ACCATCCGTGCTGTTTATGA+TGG - chr1_1:18145066-18145085 Msa0012060:intron 45.0%
!! CCATCCGTGCTGTTTATGAT+GGG - chr1_1:18145067-18145086 Msa0012060:intron 45.0%
GACTCCCATCATAAACAGCA+CGG + chr1_1:18145074-18145093 None:intergenic 45.0%
TGGGAGTCTGTTTGAACGTA+TGG - chr1_1:18145086-18145105 Msa0012060:intron 45.0%
CACACTCACAACATACCCAT+AGG + chr1_1:18145272-18145291 None:intergenic 45.0%
CTATGGGTATGTTGTGAGTG+TGG - chr1_1:18145270-18145289 Msa0012060:intron 45.0%
!! AATATAATTCTATTAAAAAA+CGG + chr1_1:18141129-18141148 None:intergenic 5.0%
!!! TTATATTTTATATTTTATGA+TGG - chr1_1:18144246-18144265 Msa0012060:intron 5.0%
TTGAATGCTGGGGAATGGAG+AGG + chr1_1:18140699-18140718 None:intergenic 50.0%
GATGAGGTTGCCATAGCCAT+AGG + chr1_1:18140754-18140773 None:intergenic 50.0%
ATGGGTAGACGATGCCATCA+TGG + chr1_1:18140990-18141009 None:intergenic 50.0%
ATGATGGCATCGTCTACCCA+TGG - chr1_1:18140989-18141008 Msa0012060:intron 50.0%
TGATGGCATCGTCTACCCAT+GGG - chr1_1:18140990-18141009 Msa0012060:intron 50.0%
GCATGGTTACCCTTGATTGC+AGG - chr1_1:18141199-18141218 Msa0012060:intron 50.0%
TCTTAGCCAGAAAACTCGCC+CGG - chr1_1:18141285-18141304 Msa0012060:intron 50.0%
! GAAATACCGGGCGAGTTTTC+TGG + chr1_1:18141294-18141313 None:intergenic 50.0%
CATATGGTGGTCGAGCTTGT+TGG + chr1_1:18142036-18142055 None:intergenic 50.0%
GCCGGCCTAATAGGCTTAAA+AGG + chr1_1:18142488-18142507 None:intergenic 50.0%
ACAGGCTAGTAGGCTGTATC+AGG - chr1_1:18142812-18142831 Msa0012060:intron 50.0%
!! GGCTGTATCAGGCTTTGAGA+AGG - chr1_1:18142823-18142842 Msa0012060:intron 50.0%
!! TATCAGGCTTTGAGAAGGCC+AGG - chr1_1:18142828-18142847 Msa0012060:intron 50.0%
!!! CTACTTTTTAGGCCTGAGCC+TGG + chr1_1:18142849-18142868 None:intergenic 50.0%
CAGGCTCAGGCCTAAAAAGT+AGG - chr1_1:18142847-18142866 Msa0012060:intron 50.0%
AAATATGGCAGGCCAGGCTT+AGG - chr1_1:18142907-18142926 Msa0012060:intron 50.0%
TGTAGGGATGGGAATAGGCT+AGG + chr1_1:18142953-18142972 None:intergenic 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - chr1_1:18143568-18143587 Msa0012060:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+TGG - chr1_1:18143575-18143594 Msa0012060:intron 50.0%
AGGGGAAGGCTTGGGAAAAA+AGG - chr1_1:18143598-18143617 Msa0012060:intron 50.0%
! AAAGGGAGAGGAGGGTTTTG+GGG - chr1_1:18143648-18143667 Msa0012060:intron 50.0%
!! GTATTGGAGGAGGGTTTTGG+AGG - chr1_1:18143727-18143746 Msa0012060:intron 50.0%
TTGGAGGGGAAGGAAAGGAA+AGG + chr1_1:18143913-18143932 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr1_1:18143929-18143948 None:intergenic 50.0%
TGAATTGATGGGGCTGCTCA+AGG - chr1_1:18144531-18144550 Msa0012060:intron 50.0%
CAAGGCCAATAGAGAGCCTA+AGG - chr1_1:18144549-18144568 Msa0012060:intron 50.0%
!! GGCTTGCTAGCTACTCAGAA+TGG - chr1_1:18144992-18145011 Msa0012060:intron 50.0%
CCCATCATAAACAGCACGGA+TGG + chr1_1:18145070-18145089 None:intergenic 50.0%
GGTGGTGTGAACCTGGGAAT+TGG + chr1_1:18140579-18140598 None:intergenic 55.0%
AAGAGGGATGGGAATAGGCC+AGG - chr1_1:18142328-18142347 Msa0012060:intron 55.0%
AGGCCTTGCAAAGCCTAGCT+CGG - chr1_1:18142927-18142946 Msa0012060:intron 55.0%
CGAGTTTGGAGGGGAATGGA+GGG - chr1_1:18143579-18143598 Msa0012060:intron 55.0%
GAGTTTGGAGGGGAATGGAG+GGG - chr1_1:18143580-18143599 Msa0012060:intron 55.0%
!! AAGGGAGAGGAGGGTTTTGG+GGG - chr1_1:18143649-18143668 Msa0012060:intron 55.0%
GGAGTTTGGAGGGGAAGGAA+AGG + chr1_1:18143918-18143937 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG + chr1_1:18143923-18143942 None:intergenic 55.0%
CGGATTTACCCATCCAGACG+AGG - chr1_1:18144851-18144870 Msa0012060:intron 55.0%
CCTGTCGTAGGCTAAGCCGT+AGG + chr1_1:18142368-18142387 None:intergenic 60.0%
CCTACGGCTTAGCCTACGAC+AGG - chr1_1:18142365-18142384 Msa0012060:intron 60.0%
!! GCTTTGAGAAGGCCAGGCTC+AGG - chr1_1:18142834-18142853 Msa0012060:intron 60.0%
GGCTTTGCAAGGCCTAAGCC+TGG + chr1_1:18142922-18142941 None:intergenic 60.0%
AGGCCGAGCTAGGCTTTGCA+AGG + chr1_1:18142933-18142952 None:intergenic 60.0%
GGAATAGGCTAGGCCGAGCT+AGG + chr1_1:18142943-18142962 None:intergenic 60.0%
GCGAGTTTGGAGGGGAATGG+AGG - chr1_1:18143578-18143597 Msa0012060:intron 60.0%
TTGGAGGGGAATGGAGGGGA+AGG - chr1_1:18143584-18143603 Msa0012060:intron 60.0%
GGGAATGGAGGGGAAGGCTT+GGG - chr1_1:18143590-18143609 Msa0012060:intron 60.0%
!!! AGGGAGAGGAGGGTTTTGGG+GGG - chr1_1:18143650-18143669 Msa0012060:intron 60.0%
GGGATGGGAATAGGCCAGGC+CGG - chr1_1:18142332-18142351 Msa0012060:intron 65.0%
AATAGGCCAGGCCGGCCTAC+AGG - chr1_1:18142340-18142359 Msa0012060:intron 65.0%
ATAGGCCAGGCCGGCCTACA+GGG - chr1_1:18142341-18142360 Msa0012060:intron 65.0%
GCTAAGCCGTAGGCCCCTGT+AGG + chr1_1:18142358-18142377 None:intergenic 65.0%
GGCTTAGCCTACGACAGGCC+AGG - chr1_1:18142370-18142389 Msa0012060:intron 65.0%
AGCCTACGACAGGCCAGGCT+AGG - chr1_1:18142375-18142394 Msa0012060:intron 65.0%
ACTGGCATGCGGCCCGTCAT+AGG + chr1_1:18142873-18142892 None:intergenic 65.0%
ACGGGCCGCATGCCAGTCTT+AGG - chr1_1:18142876-18142895 Msa0012060:intron 65.0%
GGGGAATGGAGGGGAAGGCT+TGG - chr1_1:18143589-18143608 Msa0012060:intron 65.0%
!!! GGGAGAGGAGGGTTTTGGGG+GGG - chr1_1:18143651-18143670 Msa0012060:intron 65.0%
TAGGCCAGGCCGGCCTACAG+GGG - chr1_1:18142342-18142361 Msa0012060:intron 70.0%
AGCCGTAGGCCCCTGTAGGC+CGG + chr1_1:18142354-18142373 None:intergenic 70.0%
GGCCTAGCCTGGCCTGTCGT+AGG + chr1_1:18142380-18142399 None:intergenic 70.0%
TAGGCCCCTGTAGGCCGGCC+TGG + chr1_1:18142349-18142368 None:intergenic 75.0%
GGCCGGCCTACAGGGGCCTA+CGG - chr1_1:18142349-18142368 Msa0012060:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 18140517 18145367 18140517 ID=Msa0012060;Name=Msa0012060
chr1_1 mRNA 18140517 18145367 18140517 ID=Msa0012060-mRNA-1;Parent=Msa0012060;Name=Msa0012060-mRNA-1;_AED=0.44;_eAED=0.44;_QI=112|0.8|1|1|0.8|0.83|6|224|157
chr1_1 exon 18140517 18140891 18140517 ID=Msa0012060-mRNA-1:exon:6657;Parent=Msa0012060-mRNA-1
chr1_1 exon 18141516 18141610 18141516 ID=Msa0012060-mRNA-1:exon:6656;Parent=Msa0012060-mRNA-1
chr1_1 exon 18144578 18144663 18144578 ID=Msa0012060-mRNA-1:exon:6655;Parent=Msa0012060-mRNA-1
chr1_1 exon 18144860 18144958 18144860 ID=Msa0012060-mRNA-1:exon:6654;Parent=Msa0012060-mRNA-1
chr1_1 exon 18145088 18145172 18145088 ID=Msa0012060-mRNA-1:exon:6653;Parent=Msa0012060-mRNA-1
chr1_1 exon 18145298 18145367 18145298 ID=Msa0012060-mRNA-1:exon:6652;Parent=Msa0012060-mRNA-1
chr1_1 five_prime_UTR 18145298 18145367 18145298 ID=Msa0012060-mRNA-1:five_prime_utr;Parent=Msa0012060-mRNA-1
chr1_1 five_prime_UTR 18145131 18145172 18145131 ID=Msa0012060-mRNA-1:five_prime_utr;Parent=Msa0012060-mRNA-1
chr1_1 CDS 18145088 18145130 18145088 ID=Msa0012060-mRNA-1:cds;Parent=Msa0012060-mRNA-1
chr1_1 CDS 18144860 18144958 18144860 ID=Msa0012060-mRNA-1:cds;Parent=Msa0012060-mRNA-1
chr1_1 CDS 18144578 18144663 18144578 ID=Msa0012060-mRNA-1:cds;Parent=Msa0012060-mRNA-1
chr1_1 CDS 18141516 18141610 18141516 ID=Msa0012060-mRNA-1:cds;Parent=Msa0012060-mRNA-1
chr1_1 CDS 18140741 18140891 18140741 ID=Msa0012060-mRNA-1:cds;Parent=Msa0012060-mRNA-1
chr1_1 three_prime_UTR 18140517 18140740 18140517 ID=Msa0012060-mRNA-1:three_prime_utr;Parent=Msa0012060-mRNA-1
Gene Sequence

>Msa0012060

ATGGCTATGGCAACCTCATCTTCTACCACAAACAACAATGGAGAGAAACAAATAGAACATGATCAAAATGTTCTACAAAAACATGTTGCATTCTTCGATAGGAACCATGATGGCATCGTCTACCCATGGGAAACATTTCAAGGATTTCGAGCAATAGGTTGTGGAATTATATTGTCAAGTTTTGCAGCTATTTTCATAAATTTTGGTCTTAGCCAGAAAACTCGCCCGGGAAAGTTTCCATCTATCTTTCTACCAGTAGAAATTAAAAACATAACGAAAGCAAAACATGGAAGTGACTCTGGTGTCTATGATAACGAAGGAAGGCTTGCTAGCTACTCAGAATGGAAGATCTTGTATGTTCTTTGCAAAGATAAGGATGGTTTACTACACAAAGAAACCATCCGTGCTGTTTATGATGGGAGTCTGTTTGAACGTATGGAAAAGGAGCACTCAGAAAAGAAAAAGAATAAATAA

Protein sequence

>Msa0012060

MAMATSSSTTNNNGEKQIEHDQNVLQKHVAFFDRNHDGIVYPWETFQGFRAIGCGIILSSFAAIFINFGLSQKTRPGKFPSIFLPVEIKNITKAKHGSDSGVYDNEGRLASYSEWKILYVLCKDKDGLLHKETIRAVYDGSLFERMEKEHSEKKKNK*