Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138820 | A0A072UTC8 | 94.608 | 408 | 9 | 1 | 1 | 408 | 1 | 395 | 0.0 | 784 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0138820 | 0.807025 | 6.183537e-50 | -8.615850e-47 |
| Msa0016670 | Msa0138820 | -0.819769 | 9.760763e-53 | -8.615850e-47 |
| Msa0017510 | Msa0138820 | -0.844997 | 5.344374e-59 | -8.615850e-47 |
| Msa0032840 | Msa0138820 | 0.859540 | 3.853352e-63 | -8.615850e-47 |
| Msa0043670 | Msa0138820 | 0.803735 | 3.024911e-49 | -8.615850e-47 |
| Msa0072810 | Msa0138820 | -0.810042 | 1.402779e-50 | -8.615850e-47 |
| Msa0081360 | Msa0138820 | -0.817474 | 3.236648e-52 | -8.615850e-47 |
| Msa0081480 | Msa0138820 | -0.814126 | 1.806013e-51 | -8.615850e-47 |
| Msa0085360 | Msa0138820 | 0.801418 | 9.090821e-49 | -8.615850e-47 |
| Msa0094120 | Msa0138820 | -0.802878 | 4.552637e-49 | -8.615850e-47 |
| Msa0095380 | Msa0138820 | -0.818972 | 1.482422e-52 | -8.615850e-47 |
| Msa0101810 | Msa0138820 | 0.816000 | 6.929744e-52 | -8.615850e-47 |
| Msa0103000 | Msa0138820 | -0.820574 | 6.381731e-53 | -8.615850e-47 |
| Msa0110970 | Msa0138820 | -0.853993 | 1.654676e-61 | -8.615850e-47 |
| Msa0114540 | Msa0138820 | 0.862533 | 4.738648e-64 | -8.615850e-47 |
| Msa0124340 | Msa0138820 | -0.820155 | 7.965303e-53 | -8.615850e-47 |
| Msa0130570 | Msa0138820 | -0.809649 | 1.704965e-50 | -8.615850e-47 |
| Msa0138820 | Msa0147560 | -0.806737 | 7.112663e-50 | -8.615850e-47 |
| Msa0138820 | Msa0148100 | -0.806549 | 7.795447e-50 | -8.615850e-47 |
| Msa0138820 | Msa0157290 | -0.845166 | 4.810297e-59 | -8.615850e-47 |
| Msa0138820 | Msa0172350 | -0.814283 | 1.667079e-51 | -8.615850e-47 |
| Msa0138820 | Msa0172960 | 0.809620 | 1.728907e-50 | -8.615850e-47 |
| Msa0138820 | Msa0182620 | 0.808547 | 2.934913e-50 | -8.615850e-47 |
| Msa0138820 | Msa0188680 | 0.812590 | 3.926695e-51 | -8.615850e-47 |
| Msa0138820 | Msa0194280 | -0.810503 | 1.115984e-50 | -8.615850e-47 |
| Msa0138820 | Msa0196130 | 0.832283 | 1.032551e-55 | -8.615850e-47 |
| Msa0138820 | Msa0215320 | 0.836347 | 9.867543e-57 | -8.615850e-47 |
| Msa0138820 | Msa0222920 | -0.801588 | 8.389881e-49 | -8.615850e-47 |
| Msa0138820 | Msa0225740 | -0.802242 | 6.157599e-49 | -8.615850e-47 |
| Msa0138820 | Msa0230550 | 0.855097 | 7.928298e-62 | -8.615850e-47 |
| Msa0138820 | Msa0238070 | 0.820730 | 5.877224e-53 | -8.615850e-47 |
| Msa0138820 | Msa0267760 | -0.814812 | 1.273218e-51 | -8.615850e-47 |
| Msa0138820 | Msa0274290 | -0.808351 | 3.231720e-50 | -8.615850e-47 |
| Msa0138820 | Msa0283450 | -0.800239 | 1.582242e-48 | -8.615850e-47 |
| Msa0138820 | Msa0283520 | -0.806213 | 9.176020e-50 | -8.615850e-47 |
| Msa0138820 | Msa0292400 | -0.802326 | 5.917010e-49 | -8.615850e-47 |
| Msa0138820 | Msa0294560 | 0.844973 | 5.423209e-59 | -8.615850e-47 |
| Msa0138820 | Msa0300690 | -0.802693 | 4.969784e-49 | -8.615850e-47 |
| Msa0138820 | Msa0306300 | -0.816422 | 5.574507e-52 | -8.615850e-47 |
| Msa0138820 | Msa0307830 | 0.802329 | 5.906379e-49 | -8.615850e-47 |
| Msa0138820 | Msa0314480 | -0.805191 | 1.503700e-49 | -8.615850e-47 |
| Msa0138820 | Msa0316810 | -0.800207 | 1.606090e-48 | -8.615850e-47 |
| Msa0138820 | Msa0332000 | -0.801154 | 1.029602e-48 | -8.615850e-47 |
| Msa0138820 | Msa0336040 | 0.846330 | 2.324516e-59 | -8.615850e-47 |
| Msa0138820 | Msa0378080 | -0.804068 | 2.580012e-49 | -8.615850e-47 |
| Msa0138820 | Msa0410500 | -0.810254 | 1.263000e-50 | -8.615850e-47 |
| Msa0138820 | Msa0414950 | 0.822536 | 2.247521e-53 | -8.615850e-47 |
| Msa0138820 | Msa0419640 | 0.800639 | 1.311280e-48 | -8.615850e-47 |
| Msa0138820 | Msa0419820 | -0.809878 | 1.522301e-50 | -8.615850e-47 |
| Msa0138820 | Msa0422850 | -0.802804 | 4.714246e-49 | -8.615850e-47 |
| Msa0138820 | Msa0423900 | -0.801419 | 9.084341e-49 | -8.615850e-47 |
| Msa0138820 | Msa0436280 | 0.838276 | 3.166640e-57 | -8.615850e-47 |
| Msa0138820 | Msa0437710 | -0.801868 | 7.350705e-49 | -8.615850e-47 |
| Msa0138820 | Msa0459770 | 0.814913 | 1.209384e-51 | -8.615850e-47 |
| Msa0138820 | Msa0461720 | -0.811968 | 5.367413e-51 | -8.615850e-47 |
| Msa0138820 | Msa0467900 | 0.803785 | 2.952928e-49 | -8.615850e-47 |
| Msa0138820 | Msa0467960 | 0.806330 | 8.670554e-50 | -8.615850e-47 |
| Msa0138820 | Msa0503580 | -0.803591 | 3.240005e-49 | -8.615850e-47 |
| Msa0138820 | Msa0509970 | -0.800437 | 1.442002e-48 | -8.615850e-47 |
| Msa0138820 | Msa0518040 | -0.805932 | 1.051532e-49 | -8.615850e-47 |
| Msa0138820 | Msa0521880 | -0.800865 | 1.179555e-48 | -8.615850e-47 |
| Msa0138820 | Msa0526710 | -0.816969 | 4.203168e-52 | -8.615850e-47 |
| Msa0138820 | Msa0547140 | -0.826898 | 2.106707e-54 | -8.615850e-47 |
| Msa0138820 | Msa0574890 | -0.827149 | 1.835260e-54 | -8.615850e-47 |
| Msa0138820 | Msa0591060 | -0.822252 | 2.615848e-53 | -8.615850e-47 |
| Msa0138820 | Msa0591770 | -0.809886 | 1.516038e-50 | -8.615850e-47 |
| Msa0138820 | Msa0601850 | -0.835401 | 1.714817e-56 | -8.615850e-47 |
| Msa0138820 | Msa0624510 | -0.814752 | 1.312625e-51 | -8.615850e-47 |
| Msa0138820 | Msa0625530 | 0.800037 | 1.738861e-48 | -8.615850e-47 |
| Msa0138820 | Msa0649980 | -0.816238 | 6.128514e-52 | -8.615850e-47 |
| Msa0138820 | Msa0669850 | -0.801428 | 9.047287e-49 | -8.615850e-47 |
| Msa0138820 | Msa0684500 | -0.814882 | 1.228538e-51 | -8.615850e-47 |
| Msa0138820 | Msa0692080 | -0.804832 | 1.787630e-49 | -8.615850e-47 |
| Msa0138820 | Msa0701280 | -0.815454 | 9.170057e-52 | -8.615850e-47 |
| Msa0138820 | Msa0715010 | 0.805056 | 1.604704e-49 | -8.615850e-47 |
| Msa0138820 | Msa0722960 | -0.803876 | 2.828153e-49 | -8.615850e-47 |
| Msa0138820 | Msa0743130 | 0.806745 | 7.085194e-50 | -8.615850e-47 |
| Msa0138820 | Msa0743720 | -0.817749 | 2.806538e-52 | -8.615850e-47 |
| Msa0138820 | Msa0754720 | 0.810306 | 1.231020e-50 | -8.615850e-47 |
| Msa0138820 | Msa0756630 | 0.835802 | 1.357216e-56 | -8.615850e-47 |
| Msa0138820 | Msa0757500 | 0.802998 | 4.298735e-49 | -8.615850e-47 |
| Msa0138820 | Msa0787750 | -0.806944 | 6.432971e-50 | -8.615850e-47 |
| Msa0138820 | Msa0789570 | -0.802072 | 6.674089e-49 | -8.615850e-47 |
| Msa0138820 | Msa0790390 | 0.811571 | 6.548975e-51 | -8.615850e-47 |
| Msa0138820 | Msa0798000 | 0.809672 | 1.685293e-50 | -8.615850e-47 |
| Msa0138820 | Msa0798430 | -0.806347 | 8.596680e-50 | -8.615850e-47 |
| Msa0138820 | Msa0813740 | -0.804586 | 2.012255e-49 | -8.615850e-47 |
| Msa0138820 | Msa0824680 | -0.831744 | 1.403493e-55 | -8.615850e-47 |
| Msa0138820 | Msa0836660 | 0.812487 | 4.136239e-51 | -8.615850e-47 |
| Msa0138820 | Msa0844240 | -0.809343 | 1.983470e-50 | -8.615850e-47 |
| Msa0138820 | Msa0845750 | -0.801025 | 1.093858e-48 | -8.615850e-47 |
| Msa0138820 | Msa0850960 | -0.809017 | 2.329481e-50 | -8.615850e-47 |
| Msa0138820 | Msa0862100 | -0.807166 | 5.771055e-50 | -8.615850e-47 |
| Msa0138820 | Msa0863870 | -0.829914 | 3.942674e-55 | -8.615850e-47 |
| Msa0138820 | Msa0872310 | -0.812718 | 3.681261e-51 | -8.615850e-47 |
| Msa0138820 | Msa0880140 | -0.847462 | 1.139135e-59 | -8.615850e-47 |
| Msa0138820 | Msa0893480 | 0.971837 | 8.509220e-134 | -8.615850e-47 |
| Msa0138820 | Msa0896220 | -0.800437 | 1.441606e-48 | -8.615850e-47 |
| Msa0138820 | Msa0909000 | 0.806581 | 7.672267e-50 | -8.615850e-47 |
| Msa0138820 | Msa0930460 | 0.802295 | 6.002375e-49 | -8.615850e-47 |
| Msa0138820 | Msa0930780 | -0.827595 | 1.434099e-54 | -8.615850e-47 |
| Msa0138820 | Msa0932780 | 0.806045 | 9.953645e-50 | -8.615850e-47 |
| Msa0138820 | Msa0936340 | -0.830085 | 3.581090e-55 | -8.615850e-47 |
| Msa0138820 | Msa0947660 | -0.804685 | 1.918186e-49 | -8.615850e-47 |
| Msa0138820 | Msa0970570 | 0.812395 | 4.331500e-51 | -8.615850e-47 |
| Msa0138820 | Msa1003030 | -0.808995 | 2.354313e-50 | -8.615850e-47 |
| Msa0138820 | Msa1004900 | 0.824434 | 8.088081e-54 | -8.615850e-47 |
| Msa0138820 | Msa1007610 | 0.803780 | 2.960049e-49 | -8.615850e-47 |
| Msa0138820 | Msa1008060 | 0.823302 | 1.490283e-53 | -8.615850e-47 |
| Msa0138820 | Msa1012810 | -0.821646 | 3.614889e-53 | -8.615850e-47 |
| Msa0138820 | Msa1019020 | -0.800957 | 1.129136e-48 | -8.615850e-47 |
| Msa0138820 | Msa1026760 | -0.801559 | 8.505408e-49 | -8.615850e-47 |
| Msa0138820 | Msa1026790 | -0.800234 | 1.586022e-48 | -8.615850e-47 |
| Msa0138820 | Msa1054240 | -0.828267 | 9.888505e-55 | -8.615850e-47 |
| Msa0138820 | Msa1075220 | 0.818672 | 1.734507e-52 | -8.615850e-47 |
| Msa0138820 | Msa1082700 | -0.818364 | 2.037668e-52 | -8.615850e-47 |
| Msa0138820 | Msa1085300 | -0.810255 | 1.262390e-50 | -8.615850e-47 |
| Msa0138820 | Msa1094420 | -0.812739 | 3.643429e-51 | -8.615850e-47 |
| Msa0138820 | Msa1097640 | -0.809482 | 1.851224e-50 | -8.615850e-47 |
| Msa0138820 | Msa1104370 | -0.807989 | 3.860080e-50 | -8.615850e-47 |
| Msa0138820 | Msa1116130 | 0.823588 | 1.277697e-53 | -8.615850e-47 |
| Msa0138820 | Msa1123880 | -0.808906 | 2.459645e-50 | -8.615850e-47 |
| Msa0138820 | Msa1127950 | -0.821542 | 3.819398e-53 | -8.615850e-47 |
| Msa0138820 | Msa1130270 | 0.805617 | 1.224513e-49 | -8.615850e-47 |
| Msa0138820 | Msa1139810 | -0.819686 | 1.019307e-52 | -8.615850e-47 |
| Msa0138820 | Msa1162550 | 0.811842 | 5.718311e-51 | -8.615850e-47 |
| Msa0138820 | Msa1193950 | 0.801004 | 1.104601e-48 | -8.615850e-47 |
| Msa0138820 | Msa1208890 | 0.802170 | 6.371533e-49 | -8.615850e-47 |
| Msa0138820 | Msa1211150 | 0.825583 | 4.331407e-54 | -8.615850e-47 |
| Msa0138820 | Msa1218280 | 0.968943 | 2.113663e-129 | -8.615850e-47 |
| Msa0138820 | Msa1228210 | -0.809263 | 2.062960e-50 | -8.615850e-47 |
| Msa0138820 | Msa1264020 | -0.802610 | 5.169731e-49 | -8.615850e-47 |
| Msa0138820 | Msa1269580 | 0.831619 | 1.506051e-55 | -8.615850e-47 |
| Msa0138820 | Msa1284260 | -0.806614 | 7.550629e-50 | -8.615850e-47 |
| Msa0138820 | Msa1293770 | -0.803824 | 2.899090e-49 | -8.615850e-47 |
| Msa0138820 | Msa1299300 | 0.818976 | 1.479895e-52 | -8.615850e-47 |
| Msa0138820 | Msa1343070 | -0.807205 | 5.662657e-50 | -8.615850e-47 |
| Msa0138820 | Msa1351760 | -0.847567 | 1.065887e-59 | -8.615850e-47 |
| Msa0138820 | Msa1362510 | -0.800433 | 1.444590e-48 | -8.615850e-47 |
| Msa0138820 | Msa1364470 | 0.825395 | 4.798166e-54 | -8.615850e-47 |
| Msa0138820 | Msa1373330 | -0.803697 | 3.080033e-49 | -8.615850e-47 |
| Msa0138820 | Msa1374550 | -0.824004 | 1.020735e-53 | -8.615850e-47 |
| Msa0138820 | Msa1376090 | 0.808583 | 2.884466e-50 | -8.615850e-47 |
| Msa0138820 | Msa1377540 | 0.815250 | 1.017726e-51 | -8.615850e-47 |
| Msa0138820 | Msa1390310 | -0.807886 | 4.059662e-50 | -8.615850e-47 |
| Msa0138820 | Msa1403930 | 0.802278 | 6.052756e-49 | -8.615850e-47 |
| Msa0138820 | Msa1409870 | -0.801570 | 8.460948e-49 | -8.615850e-47 |
| Msa0138820 | Msa1416150 | -0.803856 | 2.854651e-49 | -8.615850e-47 |
| Msa0138820 | Msa1429360 | 0.838650 | 2.535661e-57 | -8.615850e-47 |
| Msa0138820 | Msa1438740 | -0.819225 | 1.298488e-52 | -8.615850e-47 |
| Msa0138820 | Msa1440260 | 0.801856 | 7.391041e-49 | -8.615850e-47 |
| Msa0138820 | Msa1443290 | 0.806419 | 8.302274e-50 | -8.615850e-47 |
| Msa0138820 | Msa1466990 | -0.817253 | 3.629227e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138820 | MtrunA17_Chr4g0067961 | 94.608 | 408 | 9 | 1 | 1 | 408 | 1 | 395 | 0.0 | 784 |
| Msa0138820 | MtrunA17_Chr2g0294991 | 63.333 | 420 | 123 | 9 | 1 | 408 | 52 | 452 | 9.92e-160 | 457 |
| Msa0138820 | MtrunA17_Chr1g0209341 | 43.632 | 424 | 189 | 9 | 9 | 400 | 1 | 406 | 6.07e-97 | 295 |
| Msa0138820 | MtrunA17_Chr6g0483721 | 43.810 | 420 | 198 | 9 | 6 | 408 | 3 | 401 | 1.25e-96 | 294 |
| Msa0138820 | MtrunA17_Chr8g0376071 | 43.250 | 400 | 187 | 11 | 21 | 408 | 13 | 384 | 2.45e-94 | 288 |
| Msa0138820 | MtrunA17_Chr2g0324081 | 37.059 | 340 | 167 | 8 | 71 | 402 | 10 | 310 | 9.90e-61 | 199 |
| Msa0138820 | MtrunA17_Chr4g0022111 | 35.965 | 342 | 172 | 6 | 65 | 401 | 2 | 301 | 5.52e-57 | 189 |
| Msa0138820 | MtrunA17_Chr1g0188731 | 31.373 | 357 | 186 | 9 | 72 | 400 | 13 | 338 | 2.09e-37 | 139 |
| Msa0138820 | MtrunA17_Chr1g0195091 | 44.030 | 134 | 67 | 2 | 269 | 401 | 7 | 133 | 7.76e-28 | 107 |
| Msa0138820 | MtrunA17_Chr6g0477851 | 30.734 | 218 | 107 | 3 | 214 | 400 | 73 | 277 | 1.28e-25 | 105 |
| Msa0138820 | MtrunA17_Chr6g0481871 | 27.463 | 335 | 165 | 14 | 105 | 406 | 818 | 1107 | 1.16e-13 | 73.2 |
| Msa0138820 | MtrunA17_Chr6g0467441 | 30.667 | 150 | 73 | 6 | 284 | 406 | 5 | 150 | 7.04e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138820 | AT4G16100.1 | 45.324 | 417 | 163 | 10 | 18 | 403 | 6 | 388 | 1.02e-100 | 305 |
| Msa0138820 | AT5G49220.1 | 42.605 | 453 | 155 | 13 | 1 | 400 | 1 | 401 | 8.63e-98 | 298 |
| Msa0138820 | AT1G15030.1 | 46.847 | 333 | 152 | 6 | 71 | 400 | 47 | 357 | 2.45e-88 | 272 |
| Msa0138820 | AT2G01260.1 | 41.310 | 397 | 193 | 11 | 10 | 400 | 4 | 366 | 9.92e-83 | 258 |
| Msa0138820 | AT1G15030.2 | 47.308 | 260 | 112 | 6 | 71 | 327 | 47 | 284 | 3.62e-64 | 207 |
| Msa0138820 | AT1G03610.1 | 36.752 | 351 | 173 | 7 | 62 | 408 | 2 | 307 | 1.15e-63 | 207 |
| Msa0138820 | AT2G01260.2 | 41.486 | 323 | 151 | 9 | 10 | 326 | 4 | 294 | 2.32e-62 | 204 |
| Msa0138820 | AT4G03420.1 | 36.012 | 336 | 170 | 6 | 71 | 400 | 7 | 303 | 8.98e-57 | 189 |
| Msa0138820 | AT4G28150.1 | 34.756 | 328 | 147 | 7 | 71 | 394 | 8 | 272 | 3.26e-52 | 176 |
| Msa0138820 | AT1G03610.2 | 39.416 | 274 | 117 | 7 | 62 | 331 | 2 | 230 | 1.69e-51 | 173 |
| Msa0138820 | AT4G28150.2 | 34.356 | 326 | 149 | 7 | 71 | 394 | 8 | 270 | 4.07e-51 | 173 |
| Msa0138820 | AT1G73210.3 | 35.447 | 347 | 176 | 10 | 64 | 402 | 5 | 311 | 9.22e-51 | 173 |
| Msa0138820 | AT1G73210.1 | 35.447 | 347 | 176 | 10 | 64 | 402 | 5 | 311 | 9.22e-51 | 173 |
| Msa0138820 | AT1G73210.2 | 35.159 | 347 | 175 | 10 | 64 | 402 | 5 | 309 | 1.43e-49 | 170 |
| Msa0138820 | AT1G17830.1 | 32.133 | 361 | 194 | 10 | 63 | 405 | 10 | 337 | 4.38e-42 | 151 |
| Msa0138820 | AT2G01260.3 | 37.154 | 253 | 134 | 8 | 10 | 256 | 4 | 237 | 2.30e-34 | 128 |
| Msa0138820 | AT4G28150.3 | 35.931 | 231 | 97 | 5 | 71 | 297 | 8 | 191 | 6.10e-32 | 120 |
| Msa0138820 | AT5G23380.1 | 31.897 | 348 | 168 | 10 | 71 | 406 | 7 | 297 | 1.13e-31 | 122 |
| Msa0138820 | AT5G23380.3 | 32.184 | 261 | 115 | 7 | 71 | 322 | 7 | 214 | 1.33e-22 | 95.9 |
| Msa0138820 | AT5G23380.2 | 32.184 | 261 | 115 | 7 | 71 | 322 | 7 | 214 | 1.33e-22 | 95.9 |
| Msa0138820 | AT5G08360.1 | 30.864 | 162 | 88 | 6 | 240 | 401 | 28 | 165 | 1.22e-12 | 66.6 |
| Msa0138820 | AT5G08360.2 | 30.827 | 133 | 77 | 3 | 269 | 401 | 3 | 120 | 1.93e-12 | 64.7 |
Find 144 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTATGTACTTGGAGATTTA+TGG | 0.151152 | 1_3:-72047008 | Msa0138820:CDS |
| ACAAGTTCAAAATTTCTATC+TGG | 0.224727 | 1_3:-72043001 | Msa0138820:CDS |
| TTCCAGAGTTGAAGACTTAC+TGG | 0.245117 | 1_3:-72043413 | Msa0138820:CDS |
| CCTTTGGCTGGTTTGAATGC+TGG | 0.245831 | 1_3:-72043506 | Msa0138820:CDS |
| AGGCTATCGTTACCAATCTT+TGG | 0.246177 | 1_3:-72043035 | Msa0138820:CDS |
| GTTGCTTAACTAGGGGATTC+CGG | 0.270793 | 1_3:-72042686 | Msa0138820:three_prime_UTR |
| TACCCACTTACTTACTGATT+TGG | 0.288714 | 1_3:-72042418 | Msa0138820:three_prime_UTR |
| TGGCACGAGCTGCTGAAAAT+TGG | 0.296299 | 1_3:-72042938 | Msa0138820:CDS |
| CTTTGGCTGGTTTGAATGCT+GGG | 0.297140 | 1_3:-72043505 | Msa0138820:CDS |
| TACATCTGATATATCAAATT+TGG | 0.299390 | 1_3:-72047447 | Msa0138820:CDS |
| GCTAATGGCTCGCGATTATA+AGG | 0.302384 | 1_3:+72043548 | None:intergenic |
| TTGCTTAACTAGGGGATTCC+GGG | 0.304330 | 1_3:-72042685 | Msa0138820:three_prime_UTR |
| GGCTATCGTTACCAATCTTT+GGG | 0.306293 | 1_3:-72043034 | Msa0138820:CDS |
| CCAGTAGGTATTCTATATAT+TGG | 0.323623 | 1_3:+72043253 | None:intergenic |
| TCACCAAAAGGGTGTGTATC+AGG | 0.342474 | 1_3:+72042471 | None:intergenic |
| ACCGGTGGCGCTGCCATCGC+CGG | 0.347243 | 1_3:-72047635 | Msa0138820:CDS |
| CTATGTACTTGGAGATTTAT+GGG | 0.348445 | 1_3:-72047007 | Msa0138820:CDS |
| TCTCGCCGAGTTGTCGATTA+CGG | 0.349296 | 1_3:+72047600 | None:intergenic |
| ATACCTGATACACACCCTTT+TGG | 0.356752 | 1_3:-72042474 | Msa0138820:three_prime_UTR |
| TTTAAGGAATGGAGTGCATA+TGG | 0.374580 | 1_3:-72046979 | Msa0138820:CDS |
| AGCAGCTCGTGCCAGAGAAT+TGG | 0.376757 | 1_3:+72042947 | None:intergenic |
| ACCTGCAAGTTGGGTTTCGC+TGG | 0.380213 | 1_3:-72043376 | Msa0138820:CDS |
| TGATCTTTCACCTGCAAGTT+GGG | 0.386324 | 1_3:-72043385 | Msa0138820:CDS |
| GCGGCCTATGTATTCCTTCC+CGG | 0.391641 | 1_3:-72042806 | Msa0138820:three_prime_UTR |
| CGAGCAATCGGAAGAAGAAC+CGG | 0.399227 | 1_3:+72047484 | None:intergenic |
| TACTTTGTAAAGCTGTTGAC+AGG | 0.400970 | 1_3:+72043185 | None:intergenic |
| CAAGTTGGGTTTCGCTGGCT+TGG | 0.407061 | 1_3:-72043371 | Msa0138820:intron |
| GCTATCGCTGCTTGTCTCTC+TGG | 0.407206 | 1_3:+72043766 | None:intergenic |
| CATCTTGCCTTATCTGCTAA+TGG | 0.407959 | 1_3:+72043533 | None:intergenic |
| CAGGTGAAATATGTATCAAT+TGG | 0.411079 | 1_3:+72042527 | None:intergenic |
| GCCGGCGATGGCAGCGCCAC+CGG | 0.414214 | 1_3:+72047634 | None:intergenic |
| ATATGGGGCGGGTGTTCCTT+TGG | 0.420874 | 1_3:-72046962 | Msa0138820:CDS |
| TGTACTAGACAAGCAGTAAC+AGG | 0.421078 | 1_3:+72042508 | None:intergenic |
| ACCAGGAGGGTTGGAGCTCT+CGG | 0.421092 | 1_3:+72043604 | None:intergenic |
| GAGAAGGTGAAGTGTGAAGA+AGG | 0.427220 | 1_3:+72047718 | None:intergenic |
| CAAAACCTTCCACGCGGTTA+AGG | 0.434657 | 1_3:-72046864 | Msa0138820:intron |
| TTCATAAAGAAATTGTAATC+AGG | 0.437136 | 1_3:+72042891 | None:intergenic |
| GCCAGCGAAACCCAACTTGC+AGG | 0.437891 | 1_3:+72043375 | None:intergenic |
| CTCCAGTAAGTCTTCAACTC+TGG | 0.438180 | 1_3:+72043411 | None:intergenic |
| GCAAGCAGGGTTGCTTAACT+AGG | 0.439763 | 1_3:-72042695 | Msa0138820:three_prime_UTR |
| TTACATCTCATCTCACCAAA+AGG | 0.441049 | 1_3:+72042459 | None:intergenic |
| CAAGTTCAAAATTTCTATCT+GGG | 0.441685 | 1_3:-72043000 | Msa0138820:CDS |
| GTTGCGGCTTCCGCCGGCGA+TGG | 0.447916 | 1_3:+72047622 | None:intergenic |
| GTTGGCTTATGTGATAATAA+TGG | 0.449234 | 1_3:+72042386 | None:intergenic |
| TCACTCGGTGAACCCGTTGA+AGG | 0.451853 | 1_3:+72043632 | None:intergenic |
| AATTGAGCTGCTTCTGTTGA+GGG | 0.458308 | 1_3:+72042837 | None:intergenic |
| GTAAAGCTGTTGACAGGGAA+TGG | 0.463969 | 1_3:+72043191 | None:intergenic |
| AGAAGGTGAAGTGTGAAGAA+GGG | 0.465492 | 1_3:+72047719 | None:intergenic |
| CTCTGCTATCTCGAATATAT+AGG | 0.465631 | 1_3:+72042864 | None:intergenic |
| CGGTACTAATTCAGCTTCCT+CGG | 0.467513 | 1_3:+72047032 | None:intergenic |
| GGATGCATGCAATCATGCTT+TGG | 0.468623 | 1_3:-72043675 | Msa0138820:CDS |
| TTTCCAAATCAGTAAGTAAG+TGG | 0.474657 | 1_3:+72042415 | None:intergenic |
| TCATTAAGTAAACCTTCAAC+GGG | 0.475052 | 1_3:-72043644 | Msa0138820:CDS |
| GCAAGATGCTATCCTTTGGC+TGG | 0.477580 | 1_3:-72043518 | Msa0138820:CDS |
| ATAAAAGAAGCAGAAAATCT+TGG | 0.480235 | 1_3:+72042581 | None:intergenic |
| ATTACGGTTGCGGCTTCCGC+CGG | 0.480381 | 1_3:+72047616 | None:intergenic |
| CTCATTAAGTAAACCTTCAA+CGG | 0.482636 | 1_3:-72043645 | Msa0138820:CDS |
| CGAGTTGTCGATTACGGTTG+CGG | 0.484859 | 1_3:+72047606 | None:intergenic |
| GTGATCTTTCACCTGCAAGT+TGG | 0.485241 | 1_3:-72043386 | Msa0138820:CDS |
| TTGACAGGGAATGGAAAGTC+AGG | 0.486002 | 1_3:+72043200 | None:intergenic |
| ATGAACAACAGAAGTGATAC+CGG | 0.487285 | 1_3:+72042787 | None:intergenic |
| TGAGATTCAGAAACTCCGTC+TGG | 0.488227 | 1_3:+72042975 | None:intergenic |
| ATATTCATTATTCAAGAGGT+AGG | 0.488730 | 1_3:-72043070 | Msa0138820:CDS |
| GAAGATATTGTGCAGGAACA+TGG | 0.492098 | 1_3:+72047399 | None:intergenic |
| TCCTGCACAATATCTTCCTA+AGG | 0.493447 | 1_3:-72047393 | Msa0138820:intron |
| GGCGATGGCAGCGCCACCGG+TGG | 0.496828 | 1_3:+72047637 | None:intergenic |
| TCGCGAGCCATTAGCAGATA+AGG | 0.498035 | 1_3:-72043540 | Msa0138820:CDS |
| TTAAGGAATGGAGTGCATAT+GGG | 0.498489 | 1_3:-72046978 | Msa0138820:CDS |
| GGTGTTCCTTTGGTGATGAA+TGG | 0.498888 | 1_3:-72046952 | Msa0138820:CDS |
| GCACTCAAACTCTGCAGTGT+TGG | 0.498957 | 1_3:+72043229 | None:intergenic |
| ATCTCAGAAAGCCAATTCTC+TGG | 0.502730 | 1_3:-72042958 | Msa0138820:CDS |
| GAGCTCTCGGTCTCTTCACT+CGG | 0.503936 | 1_3:+72043617 | None:intergenic |
| GCTTAACTAGGGGATTCCGG+GGG | 0.504351 | 1_3:-72042683 | Msa0138820:three_prime_UTR |
| TAAGGCAAGATGCTATCCTT+TGG | 0.505223 | 1_3:-72043522 | Msa0138820:CDS |
| TAGGAATCATCTTAATGCAT+TGG | 0.505289 | 1_3:-72043696 | Msa0138820:CDS |
| ACCGAGAGCTCCAACCCTCC+TGG | 0.506379 | 1_3:-72043605 | Msa0138820:CDS |
| TTAGTACCGTACTATGTACT+TGG | 0.508746 | 1_3:-72047018 | Msa0138820:CDS |
| ACGTGAAGAAATCGAGCAAT+CGG | 0.510081 | 1_3:+72047472 | None:intergenic |
| AACAGACAAGTTCAAAGAGA+TGG | 0.511927 | 1_3:-72047059 | Msa0138820:intron |
| TGCTTAACTAGGGGATTCCG+GGG | 0.512379 | 1_3:-72042684 | Msa0138820:three_prime_UTR |
| TCTTCATAATATAAGCAAGC+AGG | 0.512662 | 1_3:-72042709 | Msa0138820:three_prime_UTR |
| CTTAATATTCATTATTCAAG+AGG | 0.512868 | 1_3:-72043074 | Msa0138820:CDS |
| TACATCTCATCTCACCAAAA+GGG | 0.515717 | 1_3:+72042460 | None:intergenic |
| CTGTGTTTACGAAGAGGTGG+TGG | 0.517223 | 1_3:+72047563 | None:intergenic |
| TGATGGGCAAGCCCAAAGAT+TGG | 0.521628 | 1_3:+72043023 | None:intergenic |
| TTGAATAATGAATATTAAGC+GGG | 0.522707 | 1_3:+72043078 | None:intergenic |
| CAAGCAGGGTTGCTTAACTA+GGG | 0.524661 | 1_3:-72042694 | Msa0138820:three_prime_UTR |
| GAGCTGCTGAAAATTGGCTT+AGG | 0.525829 | 1_3:-72042932 | Msa0138820:CDS |
| TATTCATTATTCAAGAGGTA+GGG | 0.527308 | 1_3:-72043069 | Msa0138820:CDS |
| AAAGATTGGTAACGATAGCC+TGG | 0.528010 | 1_3:+72043037 | None:intergenic |
| ACAAGCAGCGATAGCAGCAG+TGG | 0.538484 | 1_3:-72043758 | Msa0138820:CDS |
| AAGATATTGTGCAGGAACAT+GGG | 0.542938 | 1_3:+72047400 | None:intergenic |
| ATGCAATCATGCTTTGGAAA+GGG | 0.545871 | 1_3:-72043669 | Msa0138820:CDS |
| TATCAGCTGACCAGGAGGGT+TGG | 0.550588 | 1_3:+72043595 | None:intergenic |
| CCAATATATAGAATACCTAC+TGG | 0.551922 | 1_3:-72043253 | Msa0138820:CDS |
| TATTGAAATATCAGCTGACC+AGG | 0.554105 | 1_3:+72043587 | None:intergenic |
| GAAGCAGAAAATCTTGGTCA+AGG | 0.554786 | 1_3:+72042587 | None:intergenic |
| GAATTGAGCTGCTTCTGTTG+AGG | 0.556229 | 1_3:+72042836 | None:intergenic |
| GAATGGAGTGCATATGGGGC+GGG | 0.557966 | 1_3:-72046973 | Msa0138820:CDS |
| TTCGCTTTCTAGAACCTCAT+CGG | 0.561586 | 1_3:-72047516 | Msa0138820:CDS |
| GGGATCAATATAAAGCTGAA+TGG | 0.562198 | 1_3:+72046888 | None:intergenic |
| ACCTTAGGAAGATATTGTGC+AGG | 0.564825 | 1_3:+72047392 | None:intergenic |
| ACTAACCTTAACCGCGTGGA+AGG | 0.571996 | 1_3:+72046859 | None:intergenic |
| GAGCAATCGGAAGAAGAACC+GGG | 0.575322 | 1_3:+72047485 | None:intergenic |
| AGTGGCAATTGTAATGAAAG+AGG | 0.583383 | 1_3:-72043740 | Msa0138820:CDS |
| GGTGGCGCTGCCATCGCCGG+CGG | 0.583498 | 1_3:-72047632 | Msa0138820:CDS |
| TTTGGCTGGTTTGAATGCTG+GGG | 0.584602 | 1_3:-72043504 | Msa0138820:CDS |
| GGAATGGAAAGTCAGGAAGC+AGG | 0.586747 | 1_3:+72043207 | None:intergenic |
| CTTCATAATATAAGCAAGCA+GGG | 0.587091 | 1_3:-72042708 | Msa0138820:three_prime_UTR |
| CTCTGCAGTGTTGGACCAGT+AGG | 0.589732 | 1_3:+72043238 | None:intergenic |
| TAAGGAATGGAGTGCATATG+GGG | 0.590626 | 1_3:-72046977 | Msa0138820:CDS |
| CATTCTGTGATATCAGAAGC+GGG | 0.592224 | 1_3:+72042617 | None:intergenic |
| CGCAACCGTAATCGACAACT+CGG | 0.593188 | 1_3:-72047605 | Msa0138820:CDS |
| AAATCTCCAAGTACATAGTA+CGG | 0.596621 | 1_3:+72047012 | None:intergenic |
| AAGCAGAAAATCTTGGTCAA+GGG | 0.599303 | 1_3:+72042588 | None:intergenic |
| GCTATCTCGAATATATAGGA+TGG | 0.600309 | 1_3:+72042868 | None:intergenic |
| TCTTCAATGTCAGCCACCGG+TGG | 0.602979 | 1_3:-72047650 | Msa0138820:exon |
| TCTCTGTGTTTACGAAGAGG+TGG | 0.603487 | 1_3:+72047560 | None:intergenic |
| ACCTCATCGGAAAATAGACC+CGG | 0.603610 | 1_3:-72047503 | Msa0138820:CDS |
| GCATTCTGTGATATCAGAAG+CGG | 0.604780 | 1_3:+72042616 | None:intergenic |
| CATGCAATCATGCTTTGGAA+AGG | 0.606980 | 1_3:-72043670 | Msa0138820:CDS |
| TCATTGCCATTCATCACCAA+AGG | 0.608416 | 1_3:+72046946 | None:intergenic |
| GAGGTAGGGACATATCATCC+AGG | 0.615118 | 1_3:-72043055 | Msa0138820:CDS |
| TATGAAGACACAAGCGATCG+TGG | 0.615816 | 1_3:+72042724 | None:intergenic |
| GCAGCTCAATTCTCAAACTG+CGG | 0.616730 | 1_3:-72042825 | Msa0138820:three_prime_UTR |
| CTTGAATAATGAATATTAAG+CGG | 0.617456 | 1_3:+72043077 | None:intergenic |
| TTCCAAATCAGTAAGTAAGT+GGG | 0.618529 | 1_3:+72042416 | None:intergenic |
| TGAACAACAGAAGTGATACC+GGG | 0.622204 | 1_3:+72042788 | None:intergenic |
| GGTGTTTATGATTGAAGACA+TGG | 0.633475 | 1_3:+72042745 | None:intergenic |
| CCAGCATTCAAACCAGCCAA+AGG | 0.634773 | 1_3:+72043506 | None:intergenic |
| ACTTTGTAAAGCTGTTGACA+GGG | 0.637229 | 1_3:+72043186 | None:intergenic |
| AGATATTGTGCAGGAACATG+GGG | 0.639958 | 1_3:+72047401 | None:intergenic |
| GAAATATCAGCTGACCAGGA+GGG | 0.640142 | 1_3:+72043591 | None:intergenic |
| GTTTAATTTAGCATTCGTTG+AGG | 0.647952 | 1_3:+72047741 | None:intergenic |
| ATTTCTATCTGGGATCCAGA+CGG | 0.651136 | 1_3:-72042990 | Msa0138820:CDS |
| TGAAATATCAGCTGACCAGG+AGG | 0.652090 | 1_3:+72043590 | None:intergenic |
| AAGCAGGGTTGCTTAACTAG+GGG | 0.654639 | 1_3:-72042693 | Msa0138820:three_prime_UTR |
| CAACAGAAGTGATACCGGGA+AGG | 0.665204 | 1_3:+72042792 | None:intergenic |
| GATACCGGGAAGGAATACAT+AGG | 0.666171 | 1_3:+72042802 | None:intergenic |
| CTTAACTAGGGGATTCCGGG+GGG | 0.668234 | 1_3:-72042682 | Msa0138820:three_prime_UTR |
| GGAATGGAGTGCATATGGGG+CGG | 0.676421 | 1_3:-72046974 | Msa0138820:CDS |
| TTCAAAGAGATGGAAAACCG+AGG | 0.703539 | 1_3:-72047049 | Msa0138820:CDS |
| ACATACTAACCTTAACCGCG+TGG | 0.735225 | 1_3:+72046855 | None:intergenic |
| ATCCCACAAAACCTTCCACG+CGG | 0.769771 | 1_3:-72046870 | Msa0138820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAGAATTTTGTTTTTTTT+TGG | - | chr1_3:72043648-72043667 | Msa0138820:CDS | 10.0% |
| !!! | ATAGAATTTTGTTTTTTTTT+GGG | - | chr1_3:72043649-72043668 | Msa0138820:CDS | 10.0% |
| !!! | TAAAGAATAATTGTTTATTT+TGG | - | chr1_3:72043777-72043796 | Msa0138820:CDS | 10.0% |
| !!! | AAAACTGATTTTGATAATTT+GGG | + | chr1_3:72042501-72042520 | None:intergenic | 15.0% |
| !!! | ATAAATGGGATTTTAAATAA+TGG | - | chr1_3:72042896-72042915 | Msa0138820:CDS | 15.0% |
| !!! | TAAATGGGATTTTAAATAAT+GGG | - | chr1_3:72042897-72042916 | Msa0138820:CDS | 15.0% |
| !! | AATCAAAATTCTTAAATATG+TGG | + | chr1_3:72044520-72044539 | None:intergenic | 15.0% |
| !!! | AATTTTGAGATTACTATAAA+GGG | + | chr1_3:72045522-72045541 | None:intergenic | 15.0% |
| !!! | TAATTTTGAGATTACTATAA+AGG | + | chr1_3:72045523-72045542 | None:intergenic | 15.0% |
| !!! | TTTTTTATGTACGTATAAAT+TGG | - | chr1_3:72045873-72045892 | Msa0138820:intron | 15.0% |
| !!! | GAAAACTGATTTTGATAATT+TGG | + | chr1_3:72042502-72042521 | None:intergenic | 20.0% |
| !! | TACATCTGATATATCAAATT+TGG | - | chr1_3:72042723-72042742 | Msa0138820:three_prime_UTR | 20.0% |
| !!! | ATTTTAGATGTCTCTTAAAT+TGG | - | chr1_3:72042947-72042966 | Msa0138820:CDS | 20.0% |
| !!! | TTTTAGATGTCTCTTAAATT+GGG | - | chr1_3:72042948-72042967 | Msa0138820:CDS | 20.0% |
| !!! | TAGTTTTTTAAGGTTAATGT+CGG | - | chr1_3:72043002-72043021 | Msa0138820:CDS | 20.0% |
| !!! | TTTCAATTCAAAGTACATTT+TGG | - | chr1_3:72043045-72043064 | Msa0138820:CDS | 20.0% |
| !! | TTATATGAATAATAACACTC+TGG | + | chr1_3:72043870-72043889 | None:intergenic | 20.0% |
| !!! | TCTTAAATATGTGGATATTT+TGG | + | chr1_3:72044511-72044530 | None:intergenic | 20.0% |
| !!! | TGTTTTCTATAATATGCTAA+AGG | + | chr1_3:72044908-72044927 | None:intergenic | 20.0% |
| !! | AAACACTCTATTAAAAAAGA+TGG | + | chr1_3:72045029-72045048 | None:intergenic | 20.0% |
| !!! | AACTTAAAAATTTGTTGGAA+GGG | - | chr1_3:72045455-72045474 | Msa0138820:intron | 20.0% |
| !! | TTTATACGTACATAAAAAAG+AGG | + | chr1_3:72045872-72045891 | None:intergenic | 20.0% |
| !! | AAAACATTGTTACATTAGAA+AGG | + | chr1_3:72046259-72046278 | None:intergenic | 20.0% |
| !! | AAGAAATACAAATACATGTT+AGG | + | chr1_3:72046708-72046727 | None:intergenic | 20.0% |
| !! | ATAAAACCACAATAATATCA+TGG | + | chr1_3:72046847-72046866 | None:intergenic | 20.0% |
| !! | TTGAATAATGAATATTAAGC+GGG | + | chr1_3:72047095-72047114 | None:intergenic | 20.0% |
| !! | CTTGAATAATGAATATTAAG+CGG | + | chr1_3:72047096-72047115 | None:intergenic | 20.0% |
| !! | CTTAATATTCATTATTCAAG+AGG | - | chr1_3:72047096-72047115 | Msa0138820:intron | 20.0% |
| !! | TTCATAAAGAAATTGTAATC+AGG | + | chr1_3:72047282-72047301 | None:intergenic | 20.0% |
| ! | ACACTTAAAAATGAAGATGA+CGG | + | chr1_3:72042376-72042395 | None:intergenic | 25.0% |
| !!! | ATCAAATTTGGATCGATTTT+TGG | - | chr1_3:72042735-72042754 | Msa0138820:three_prime_UTR | 25.0% |
| !! | AAAAAGCGTAATTGAATTGA+AGG | + | chr1_3:72042818-72042837 | None:intergenic | 25.0% |
| !!! | CATAACGTGTTAGTTTTTTA+AGG | - | chr1_3:72042992-72043011 | Msa0138820:CDS | 25.0% |
| !! | AGATTTATGGGAATCTTTTA+AGG | - | chr1_3:72043175-72043194 | Msa0138820:intron | 25.0% |
| ! | AAATGCTATGTTTCATTTCA+TGG | + | chr1_3:72043343-72043362 | None:intergenic | 25.0% |
| !!! | ATTCACTAGAGTATTTTATC+TGG | - | chr1_3:72044348-72044367 | Msa0138820:intron | 25.0% |
| !!! | AAATATGTGGATATTTTGGA+AGG | + | chr1_3:72044507-72044526 | None:intergenic | 25.0% |
| ! | AAAAAATGAGTAGATGATAC+TGG | - | chr1_3:72044669-72044688 | Msa0138820:intron | 25.0% |
| ! | TGAAGACAGTTTATAAAGAA+GGG | + | chr1_3:72044815-72044834 | None:intergenic | 25.0% |
| ! | TTGAAGACAGTTTATAAAGA+AGG | + | chr1_3:72044816-72044835 | None:intergenic | 25.0% |
| ! | TCTTAATAATTGCATGTTGA+AGG | - | chr1_3:72044931-72044950 | Msa0138820:intron | 25.0% |
| !!! | TTTAGGATTTTTTTGGAGAT+TGG | + | chr1_3:72045299-72045318 | None:intergenic | 25.0% |
| ! | AATACAAAATCCCTGTAATA+TGG | - | chr1_3:72045429-72045448 | Msa0138820:intron | 25.0% |
| ! | ATACAAAATCCCTGTAATAT+GGG | - | chr1_3:72045430-72045449 | Msa0138820:intron | 25.0% |
| !!! | GAACTTAAAAATTTGTTGGA+AGG | - | chr1_3:72045454-72045473 | Msa0138820:intron | 25.0% |
| !!! | ACTTAAAAATTTGTTGGAAG+GGG | - | chr1_3:72045456-72045475 | Msa0138820:intron | 25.0% |
| !!! | CAACTGTATTTTAGACAATT+GGG | - | chr1_3:72045970-72045989 | Msa0138820:intron | 25.0% |
| !! | CAATATGATGCATTTTATCT+TGG | - | chr1_3:72046164-72046183 | Msa0138820:intron | 25.0% |
| ! | ACAATAATATCATGGACAAA+AGG | + | chr1_3:72046839-72046858 | None:intergenic | 25.0% |
| !! | TTTTGTCCATGATATTATTG+TGG | - | chr1_3:72046838-72046857 | Msa0138820:intron | 25.0% |
| !! | TAAATTATTTGTTGCTCTGA+AGG | - | chr1_3:72046891-72046910 | Msa0138820:CDS | 25.0% |
| !!! | AACATTTTGATCTTTGAATC+AGG | - | chr1_3:72047057-72047076 | Msa0138820:CDS | 25.0% |
| ! | ATATTCATTATTCAAGAGGT+AGG | - | chr1_3:72047100-72047119 | Msa0138820:intron | 25.0% |
| ! | TATTCATTATTCAAGAGGTA+GGG | - | chr1_3:72047101-72047120 | Msa0138820:intron | 25.0% |
| !! | AGAAATTTTGAACTTGTGAT+GGG | + | chr1_3:72047166-72047185 | None:intergenic | 25.0% |
| !! | TAGAAATTTTGAACTTGTGA+TGG | + | chr1_3:72047167-72047186 | None:intergenic | 25.0% |
| ! | ACAAGTTCAAAATTTCTATC+TGG | - | chr1_3:72047169-72047188 | Msa0138820:intron | 25.0% |
| ! | CAAGTTCAAAATTTCTATCT+GGG | - | chr1_3:72047170-72047189 | Msa0138820:intron | 25.0% |
| ! | ATAAAAGAAGCAGAAAATCT+TGG | + | chr1_3:72047592-72047611 | None:intergenic | 25.0% |
| !!! | CATAAGCCAACATTTTTTTA+TGG | - | chr1_3:72047796-72047815 | Msa0138820:five_prime_UTR | 25.0% |
| ! | GTTTAATTTAGCATTCGTTG+AGG | + | chr1_3:72042432-72042451 | None:intergenic | 30.0% |
| GAGAAAAACAAGAACAACAA+AGG | - | chr1_3:72042629-72042648 | Msa0138820:three_prime_UTR | 30.0% | |
| GTGATGAAAATTGAAACCTT+AGG | + | chr1_3:72042796-72042815 | None:intergenic | 30.0% | |
| GAGTTCAATTAGCATAATCA+TGG | - | chr1_3:72042852-72042871 | Msa0138820:exon | 30.0% | |
| TTGGCGAATTAGTGAATAAA+TGG | - | chr1_3:72042881-72042900 | Msa0138820:CDS | 30.0% | |
| TGGCGAATTAGTGAATAAAT+GGG | - | chr1_3:72042882-72042901 | Msa0138820:CDS | 30.0% | |
| !!! | AAAGTACATTTTGGCTTATC+TGG | - | chr1_3:72043054-72043073 | Msa0138820:CDS | 30.0% |
| !!! | AAGTACATTTTGGCTTATCT+GGG | - | chr1_3:72043055-72043074 | Msa0138820:CDS | 30.0% |
| AAATCTCCAAGTACATAGTA+CGG | + | chr1_3:72043161-72043180 | None:intergenic | 30.0% | |
| ACTATGTACTTGGAGATTTA+TGG | - | chr1_3:72043162-72043181 | Msa0138820:intron | 30.0% | |
| CTATGTACTTGGAGATTTAT+GGG | - | chr1_3:72043163-72043182 | Msa0138820:intron | 30.0% | |
| !! | TATGGGAATCTTTTAAGGAA+TGG | - | chr1_3:72043180-72043199 | Msa0138820:intron | 30.0% |
| ! | CCTCTATTTGATAATAACAC+TGG | + | chr1_3:72043509-72043528 | None:intergenic | 30.0% |
| ! | CCAGTGTTATTATCAAATAG+AGG | - | chr1_3:72043506-72043525 | Msa0138820:CDS | 30.0% |
| !! | GTAGTCGATTTTCAAGAATT+TGG | - | chr1_3:72043546-72043565 | Msa0138820:CDS | 30.0% |
| ! | CACTCTTTAAGAACTATAAG+TGG | - | chr1_3:72043695-72043714 | Msa0138820:CDS | 30.0% |
| GTCAAACATCTGACATTTAT+TGG | - | chr1_3:72043990-72044009 | Msa0138820:intron | 30.0% | |
| TGGTTTCAGTAATAACTAGT+CGG | - | chr1_3:72044010-72044029 | Msa0138820:intron | 30.0% | |
| TCAGCATTGTTATCAATAGT+GGG | + | chr1_3:72044198-72044217 | None:intergenic | 30.0% | |
| CAAGAGGAAACATTTAAAGA+AGG | - | chr1_3:72044251-72044270 | Msa0138820:intron | 30.0% | |
| !!! | CTGTTCATTTTTTCACGTTA+GGG | + | chr1_3:72044543-72044562 | None:intergenic | 30.0% |
| !!! | TCTGTTCATTTTTTCACGTT+AGG | + | chr1_3:72044544-72044563 | None:intergenic | 30.0% |
| ! | AGTTCTCTTTTCTCTACAAA+TGG | - | chr1_3:72044575-72044594 | Msa0138820:intron | 30.0% |
| ! | GTTCTCTTTTCTCTACAAAT+GGG | - | chr1_3:72044576-72044595 | Msa0138820:intron | 30.0% |
| AAAATAAGAATGAGCAACCA+GGG | + | chr1_3:72044633-72044652 | None:intergenic | 30.0% | |
| TAAAATAAGAATGAGCAACC+AGG | + | chr1_3:72044634-72044653 | None:intergenic | 30.0% | |
| ! | AGCCTTATATATTCAAAACG+TGG | - | chr1_3:72044835-72044854 | Msa0138820:intron | 30.0% |
| GCCTTATATATTCAAAACGT+GGG | - | chr1_3:72044836-72044855 | Msa0138820:intron | 30.0% | |
| !! | TCCCACGTTTTGAATATATA+AGG | + | chr1_3:72044840-72044859 | None:intergenic | 30.0% |
| TTGTAGAGAATGACAATTGA+AGG | - | chr1_3:72045047-72045066 | Msa0138820:intron | 30.0% | |
| AGTAATATCACAACATAGAC+TGG | - | chr1_3:72045099-72045118 | Msa0138820:intron | 30.0% | |
| GTAATATCACAACATAGACT+GGG | - | chr1_3:72045100-72045119 | Msa0138820:intron | 30.0% | |
| !!! | TTTTGAGTTCCCCTAAATTA+GGG | - | chr1_3:72045176-72045195 | Msa0138820:intron | 30.0% |
| TACAAAATCCCCCTAATTTA+GGG | + | chr1_3:72045189-72045208 | None:intergenic | 30.0% | |
| ATACAAAATCCCCCTAATTT+AGG | + | chr1_3:72045190-72045209 | None:intergenic | 30.0% | |
| !!! | ATGGTGCTTTAGGATTTTTT+TGG | + | chr1_3:72045306-72045325 | None:intergenic | 30.0% |
| ! | AAAAATCCTAAAGCACCATT+TGG | - | chr1_3:72045307-72045326 | Msa0138820:intron | 30.0% |
| ! | AAAATCCTAAAGCACCATTT+GGG | - | chr1_3:72045308-72045327 | Msa0138820:intron | 30.0% |
| TACAAAATCCCTGTAATATG+GGG | - | chr1_3:72045431-72045450 | Msa0138820:intron | 30.0% | |
| ! | TAATTTTGTAGAGAACGAGA+CGG | + | chr1_3:72045570-72045589 | None:intergenic | 30.0% |
| CAAAATTACCCTCTCTAATA+AGG | - | chr1_3:72045582-72045601 | Msa0138820:intron | 30.0% | |
| GAAAGATAGCAAATACAAGA+CGG | + | chr1_3:72045713-72045732 | None:intergenic | 30.0% | |
| !! | GCAACTGTATTTTAGACAAT+TGG | - | chr1_3:72045969-72045988 | Msa0138820:intron | 30.0% |
| ATTCAGCTAAAATGGTAAAC+TGG | + | chr1_3:72046305-72046324 | None:intergenic | 30.0% | |
| AGTCTTTGATTCAGCTAAAA+TGG | + | chr1_3:72046313-72046332 | None:intergenic | 30.0% | |
| TAGGAATCATCTTAATGCAT+TGG | - | chr1_3:72046474-72046493 | Msa0138820:intron | 30.0% | |
| CTCATTAAGTAAACCTTCAA+CGG | - | chr1_3:72046525-72046544 | Msa0138820:intron | 30.0% | |
| TCATTAAGTAAACCTTCAAC+GGG | - | chr1_3:72046526-72046545 | Msa0138820:intron | 30.0% | |
| CCAGTAGGTATTCTATATAT+TGG | + | chr1_3:72046920-72046939 | None:intergenic | 30.0% | |
| CCAATATATAGAATACCTAC+TGG | - | chr1_3:72046917-72046936 | Msa0138820:CDS | 30.0% | |
| TCTTCATAATATAAGCAAGC+AGG | - | chr1_3:72047461-72047480 | Msa0138820:CDS | 30.0% | |
| CTTCATAATATAAGCAAGCA+GGG | - | chr1_3:72047462-72047481 | Msa0138820:CDS | 30.0% | |
| CAGGTGAAATATGTATCAAT+TGG | + | chr1_3:72047646-72047665 | None:intergenic | 30.0% | |
| TTCCAAATCAGTAAGTAAGT+GGG | + | chr1_3:72047757-72047776 | None:intergenic | 30.0% | |
| TTTCCAAATCAGTAAGTAAG+TGG | + | chr1_3:72047758-72047777 | None:intergenic | 30.0% | |
| ! | GTTGGCTTATGTGATAATAA+TGG | + | chr1_3:72047787-72047806 | None:intergenic | 30.0% |
| ! | TTTTCTCTGTGTTTACGAAG+AGG | + | chr1_3:72042616-72042635 | None:intergenic | 35.0% |
| AAGATATTGTGCAGGAACAT+GGG | + | chr1_3:72042773-72042792 | None:intergenic | 35.0% | |
| TATTCACTAATTCGCCAACA+GGG | + | chr1_3:72042879-72042898 | None:intergenic | 35.0% | |
| TTATTCACTAATTCGCCAAC+AGG | + | chr1_3:72042880-72042899 | None:intergenic | 35.0% | |
| ! | TGGAATATGTTGTTGTTGTG+TGG | - | chr1_3:72043078-72043097 | Msa0138820:CDS | 35.0% |
| ! | GGAATATGTTGTTGTTGTGT+GGG | - | chr1_3:72043079-72043098 | Msa0138820:CDS | 35.0% |
| AACAGACAAGTTCAAAGAGA+TGG | - | chr1_3:72043111-72043130 | Msa0138820:intron | 35.0% | |
| TTAGTACCGTACTATGTACT+TGG | - | chr1_3:72043152-72043171 | Msa0138820:intron | 35.0% | |
| TTTAAGGAATGGAGTGCATA+TGG | - | chr1_3:72043191-72043210 | Msa0138820:CDS | 35.0% | |
| TTAAGGAATGGAGTGCATAT+GGG | - | chr1_3:72043192-72043211 | Msa0138820:CDS | 35.0% | |
| GGGATCAATATAAAGCTGAA+TGG | + | chr1_3:72043285-72043304 | None:intergenic | 35.0% | |
| TTCTGCATGCTTTGTAAATG+TGG | - | chr1_3:72043472-72043491 | Msa0138820:intron | 35.0% | |
| !! | ATAGTTCTTAAAGAGTGTCC+CGG | + | chr1_3:72043692-72043711 | None:intergenic | 35.0% |
| ! | TGGAATGCTTAAAGAGTGTA+TGG | - | chr1_3:72043797-72043816 | Msa0138820:CDS | 35.0% |
| ! | GGAATGCTTAAAGAGTGTAT+GGG | - | chr1_3:72043798-72043817 | Msa0138820:CDS | 35.0% |
| ! | GAATGCTTAAAGAGTGTATG+GGG | - | chr1_3:72043799-72043818 | Msa0138820:CDS | 35.0% |
| ! | AATGCTTAAAGAGTGTATGG+GGG | - | chr1_3:72043800-72043819 | Msa0138820:CDS | 35.0% |
| !! | TTGTTATCAATAGTGGGTCA+TGG | + | chr1_3:72044192-72044211 | None:intergenic | 35.0% |
| CTCAGCATTGTTATCAATAG+TGG | + | chr1_3:72044199-72044218 | None:intergenic | 35.0% | |
| ATAACAATGCTGAGAATGAG+AGG | - | chr1_3:72044205-72044224 | Msa0138820:intron | 35.0% | |
| TAACAATGCTGAGAATGAGA+GGG | - | chr1_3:72044206-72044225 | Msa0138820:intron | 35.0% | |
| ! | GGGTTTTACTTATTGTTCTC+TGG | - | chr1_3:72044226-72044245 | Msa0138820:intron | 35.0% |
| TAGCAAGTCTAAATCAACAG+AGG | + | chr1_3:72044389-72044408 | None:intergenic | 35.0% | |
| TTGAAGGACAACCTATATGT+GGG | - | chr1_3:72044947-72044966 | Msa0138820:intron | 35.0% | |
| !!! | GGATTTTAGAAGGTTTTGGA+GGG | + | chr1_3:72045145-72045164 | None:intergenic | 35.0% |
| !! | AGGATTTTAGAAGGTTTTGG+AGG | + | chr1_3:72045146-72045165 | None:intergenic | 35.0% |
| !! | AGGAGGATTTTAGAAGGTTT+TGG | + | chr1_3:72045149-72045168 | None:intergenic | 35.0% |
| ! | TATTGGAGGAGGATTTTAGA+AGG | + | chr1_3:72045155-72045174 | None:intergenic | 35.0% |
| ! | TTAGGGGAACTCAAAAGTAT+TGG | + | chr1_3:72045172-72045191 | None:intergenic | 35.0% |
| !!! | CTTTTGAGTTCCCCTAAATT+AGG | - | chr1_3:72045175-72045194 | Msa0138820:intron | 35.0% |
| ! | TTTGAGTTCCCCTAAATTAG+GGG | - | chr1_3:72045177-72045196 | Msa0138820:intron | 35.0% |
| ACAAAATCCCCCTAATTTAG+GGG | + | chr1_3:72045188-72045207 | None:intergenic | 35.0% | |
| !!! | GATTTTTTTGGAGATTGGAG+GGG | + | chr1_3:72045294-72045313 | None:intergenic | 35.0% |
| !!! | GGATTTTTTTGGAGATTGGA+GGG | + | chr1_3:72045295-72045314 | None:intergenic | 35.0% |
| !!! | AGGATTTTTTTGGAGATTGG+AGG | + | chr1_3:72045296-72045315 | None:intergenic | 35.0% |
| TAGAGAAAGGAAGGAGAAAA+GGG | - | chr1_3:72045352-72045371 | Msa0138820:intron | 35.0% | |
| AGAAAAGGGAAAGTGAAGAA+AGG | - | chr1_3:72045366-72045385 | Msa0138820:intron | 35.0% | |
| GAAAAGGGAAAGTGAAGAAA+GGG | - | chr1_3:72045367-72045386 | Msa0138820:intron | 35.0% | |
| ACAAAATCCCTGTAATATGG+GGG | - | chr1_3:72045432-72045451 | Msa0138820:intron | 35.0% | |
| TTAAGTTCCCCCATATTACA+GGG | + | chr1_3:72045442-72045461 | None:intergenic | 35.0% | |
| ! | TTTAAGTTCCCCCATATTAC+AGG | + | chr1_3:72045443-72045462 | None:intergenic | 35.0% |
| GGGGGAACTTAAAAATTTGT+TGG | - | chr1_3:72045450-72045469 | Msa0138820:intron | 35.0% | |
| !!! | AATTTGTTGGAAGGGGATTT+TGG | - | chr1_3:72045463-72045482 | Msa0138820:intron | 35.0% |
| ! | AATTTTGTAGAGAACGAGAC+GGG | + | chr1_3:72045569-72045588 | None:intergenic | 35.0% |
| AATTACCCTCTCTAATAAGG+TGG | - | chr1_3:72045585-72045604 | Msa0138820:intron | 35.0% | |
| ATTACCCTCTCTAATAAGGT+GGG | - | chr1_3:72045586-72045605 | Msa0138820:intron | 35.0% | |
| TTAAGCTTCTTGCTCTGTTT+GGG | + | chr1_3:72045674-72045693 | None:intergenic | 35.0% | |
| TGGTTGCATATTTACATGTG+AGG | - | chr1_3:72045788-72045807 | Msa0138820:intron | 35.0% | |
| GGTTGCATATTTACATGTGA+GGG | - | chr1_3:72045789-72045808 | Msa0138820:intron | 35.0% | |
| GATGTGAGATATAAAGAACC+TGG | - | chr1_3:72045811-72045830 | Msa0138820:intron | 35.0% | |
| AGATATAAAGAACCTGGCAT+GGG | - | chr1_3:72045817-72045836 | Msa0138820:intron | 35.0% | |
| CATAAAAAAGAGGCGAGTTT+CGG | + | chr1_3:72045862-72045881 | None:intergenic | 35.0% | |
| !! | AGAGTATTGTGACTTGTGAA+CGG | + | chr1_3:72046019-72046038 | None:intergenic | 35.0% |
| CATCGAAGTAAGAAACAAGA+AGG | + | chr1_3:72046114-72046133 | None:intergenic | 35.0% | |
| ! | GAATGTTGTCTAGAACTTGT+AGG | + | chr1_3:72046145-72046164 | None:intergenic | 35.0% |
| GTCTTGTAAAAGTGATCTTG+TGG | + | chr1_3:72046221-72046240 | None:intergenic | 35.0% | |
| TGACTAGATTTCCTGGAATA+TGG | + | chr1_3:72046364-72046383 | None:intergenic | 35.0% | |
| ACTTTCTTGACTAGATTTCC+TGG | + | chr1_3:72046371-72046390 | None:intergenic | 35.0% | |
| AGTGGCAATTGTAATGAAAG+AGG | - | chr1_3:72046430-72046449 | Msa0138820:intron | 35.0% | |
| AGAGGACCAAAAACTAATCA+CGG | - | chr1_3:72046448-72046467 | Msa0138820:intron | 35.0% | |
| !! | ATGCAATCATGCTTTGGAAA+GGG | - | chr1_3:72046501-72046520 | Msa0138820:intron | 35.0% |
| TATTGAAATATCAGCTGACC+AGG | + | chr1_3:72046586-72046605 | None:intergenic | 35.0% | |
| ACTTTGTAAAGCTGTTGACA+GGG | + | chr1_3:72046987-72047006 | None:intergenic | 35.0% | |
| TACTTTGTAAAGCTGTTGAC+AGG | + | chr1_3:72046988-72047007 | None:intergenic | 35.0% | |
| TTTCTGTGTCTGCAAAATGA+TGG | - | chr1_3:72047029-72047048 | Msa0138820:CDS | 35.0% | |
| GCTATCTCGAATATATAGGA+TGG | + | chr1_3:72047305-72047324 | None:intergenic | 35.0% | |
| CTCTGCTATCTCGAATATAT+AGG | + | chr1_3:72047309-72047328 | None:intergenic | 35.0% | |
| ATGAACAACAGAAGTGATAC+CGG | + | chr1_3:72047386-72047405 | None:intergenic | 35.0% | |
| GGTGTTTATGATTGAAGACA+TGG | + | chr1_3:72047428-72047447 | None:intergenic | 35.0% | |
| AAGCAGAAAATCTTGGTCAA+GGG | + | chr1_3:72047585-72047604 | None:intergenic | 35.0% | |
| ! | ATATTTTCGACATCATCCTC+GGG | + | chr1_3:72047623-72047642 | None:intergenic | 35.0% |
| ! | GATATTTTCGACATCATCCT+CGG | + | chr1_3:72047624-72047643 | None:intergenic | 35.0% |
| TACATCTCATCTCACCAAAA+GGG | + | chr1_3:72047713-72047732 | None:intergenic | 35.0% | |
| TTACATCTCATCTCACCAAA+AGG | + | chr1_3:72047714-72047733 | None:intergenic | 35.0% | |
| ! | TACCCACTTACTTACTGATT+TGG | - | chr1_3:72047752-72047771 | Msa0138820:five_prime_UTR | 35.0% |
| AGAAGGTGAAGTGTGAAGAA+GGG | + | chr1_3:72042454-72042473 | None:intergenic | 40.0% | |
| ! | TTTTCTTCAATGTCAGCCAC+CGG | - | chr1_3:72042517-72042536 | Msa0138820:three_prime_UTR | 40.0% |
| !! | TTCGCTTTCTAGAACCTCAT+CGG | - | chr1_3:72042654-72042673 | Msa0138820:three_prime_UTR | 40.0% |
| ACGTGAAGAAATCGAGCAAT+CGG | + | chr1_3:72042701-72042720 | None:intergenic | 40.0% | |
| AGATATTGTGCAGGAACATG+GGG | + | chr1_3:72042772-72042791 | None:intergenic | 40.0% | |
| GAAGATATTGTGCAGGAACA+TGG | + | chr1_3:72042774-72042793 | None:intergenic | 40.0% | |
| TCCTGCACAATATCTTCCTA+AGG | - | chr1_3:72042777-72042796 | Msa0138820:three_prime_UTR | 40.0% | |
| ACCTTAGGAAGATATTGTGC+AGG | + | chr1_3:72042781-72042800 | None:intergenic | 40.0% | |
| !!! | TACATTTTGGCTTATCTGGG+TGG | - | chr1_3:72043058-72043077 | Msa0138820:CDS | 40.0% |
| TTCAAAGAGATGGAAAACCG+AGG | - | chr1_3:72043121-72043140 | Msa0138820:intron | 40.0% | |
| TAAGGAATGGAGTGCATATG+GGG | - | chr1_3:72043193-72043212 | Msa0138820:CDS | 40.0% | |
| TCATTGCCATTCATCACCAA+AGG | + | chr1_3:72043227-72043246 | None:intergenic | 40.0% | |
| ! | ATCACTAAGCTAGCCCATTT+TGG | - | chr1_3:72043576-72043595 | Msa0138820:CDS | 40.0% |
| TATTGTCGCTACAACTGCTA+TGG | + | chr1_3:72043620-72043639 | None:intergenic | 40.0% | |
| !! | TAGTTCTTAAAGAGTGTCCC+GGG | + | chr1_3:72043691-72043710 | None:intergenic | 40.0% |
| !! | AGACGACTTGTTGAAAAGCA+AGG | + | chr1_3:72043939-72043958 | None:intergenic | 40.0% |
| ! | TAGTGGGTCATGGAAAATAG+AGG | + | chr1_3:72044182-72044201 | None:intergenic | 40.0% |
| TTATTGTTCTCTGGTGCAAG+AGG | - | chr1_3:72044235-72044254 | Msa0138820:intron | 40.0% | |
| !! | TGTGGATATTTTGGAAGGCT+TGG | + | chr1_3:72044502-72044521 | None:intergenic | 40.0% |
| !! | AGATGATACTGGCTTGTTTG+AGG | - | chr1_3:72044680-72044699 | Msa0138820:intron | 40.0% |
| GCACAATGATGAGAAGCTAT+TGG | + | chr1_3:72044875-72044894 | None:intergenic | 40.0% | |
| AGCTTCTCATCATTGTGCTA+TGG | - | chr1_3:72044877-72044896 | Msa0138820:intron | 40.0% | |
| GTTGAAGGACAACCTATATG+TGG | - | chr1_3:72044946-72044965 | Msa0138820:intron | 40.0% | |
| !!! | TAGAAGGTTTTGGAGGGTTT+AGG | + | chr1_3:72045139-72045158 | None:intergenic | 40.0% |
| !! | GAACTCAAAAGTATTGGAGG+AGG | + | chr1_3:72045166-72045185 | None:intergenic | 40.0% |
| TTGAGTTCCCCTAAATTAGG+GGG | - | chr1_3:72045178-72045197 | Msa0138820:intron | 40.0% | |
| AAACTCCCAAATGGTGCTTT+AGG | + | chr1_3:72045316-72045335 | None:intergenic | 40.0% | |
| ! | AAAGCACCATTTGGGAGTTT+AGG | - | chr1_3:72045316-72045335 | Msa0138820:intron | 40.0% |
| CTAGAGAAAGGAAGGAGAAA+AGG | - | chr1_3:72045351-72045370 | Msa0138820:intron | 40.0% | |
| ATCTCCCACCTTATTAGAGA+GGG | + | chr1_3:72045593-72045612 | None:intergenic | 40.0% | |
| AATCTCCCACCTTATTAGAG+AGG | + | chr1_3:72045594-72045613 | None:intergenic | 40.0% | |
| CTTAAGCTTCTTGCTCTGTT+TGG | + | chr1_3:72045675-72045694 | None:intergenic | 40.0% | |
| ! | CATATCAGGTTGTCTACAGT+GGG | - | chr1_3:72045760-72045779 | Msa0138820:intron | 40.0% |
| GAGATATAAAGAACCTGGCA+TGG | - | chr1_3:72045816-72045835 | Msa0138820:intron | 40.0% | |
| TTTCTTATTGTTCCCATGCC+AGG | + | chr1_3:72045832-72045851 | None:intergenic | 40.0% | |
| TCACATTTCCACCATATTCC+AGG | - | chr1_3:72046350-72046369 | Msa0138820:intron | 40.0% | |
| CTAGATTTCCTGGAATATGG+TGG | + | chr1_3:72046361-72046380 | None:intergenic | 40.0% | |
| !!! | CTACTGCCGTGATTAGTTTT+TGG | + | chr1_3:72046457-72046476 | None:intergenic | 40.0% |
| CAAAAACTAATCACGGCAGT+AGG | - | chr1_3:72046455-72046474 | Msa0138820:intron | 40.0% | |
| !! | CATGCAATCATGCTTTGGAA+AGG | - | chr1_3:72046500-72046519 | Msa0138820:intron | 40.0% |
| CATCTTGCCTTATCTGCTAA+TGG | + | chr1_3:72046640-72046659 | None:intergenic | 40.0% | |
| TAAGGCAAGATGCTATCCTT+TGG | - | chr1_3:72046648-72046667 | Msa0138820:intron | 40.0% | |
| TTCCAGAGTTGAAGACTTAC+TGG | - | chr1_3:72046757-72046776 | Msa0138820:intron | 40.0% | |
| TGATCTTTCACCTGCAAGTT+GGG | - | chr1_3:72046785-72046804 | Msa0138820:intron | 40.0% | |
| !! | AAAGATTGGTAACGATAGCC+TGG | + | chr1_3:72047136-72047155 | None:intergenic | 40.0% |
| AGGCTATCGTTACCAATCTT+TGG | - | chr1_3:72047135-72047154 | Msa0138820:intron | 40.0% | |
| GGCTATCGTTACCAATCTTT+GGG | - | chr1_3:72047136-72047155 | Msa0138820:intron | 40.0% | |
| ! | ATTTCTATCTGGGATCCAGA+CGG | - | chr1_3:72047180-72047199 | Msa0138820:intron | 40.0% |
| ATCTCAGAAAGCCAATTCTC+TGG | - | chr1_3:72047212-72047231 | Msa0138820:intron | 40.0% | |
| AATTGAGCTGCTTCTGTTGA+GGG | + | chr1_3:72047336-72047355 | None:intergenic | 40.0% | |
| TGAACAACAGAAGTGATACC+GGG | + | chr1_3:72047385-72047404 | None:intergenic | 40.0% | |
| CATTCTGTGATATCAGAAGC+GGG | + | chr1_3:72047556-72047575 | None:intergenic | 40.0% | |
| GCATTCTGTGATATCAGAAG+CGG | + | chr1_3:72047557-72047576 | None:intergenic | 40.0% | |
| GAAGCAGAAAATCTTGGTCA+AGG | + | chr1_3:72047586-72047605 | None:intergenic | 40.0% | |
| !! | TCTTTTATGTCACTTACCCG+AGG | - | chr1_3:72047604-72047623 | Msa0138820:CDS | 40.0% |
| TGTACTAGACAAGCAGTAAC+AGG | + | chr1_3:72047665-72047684 | None:intergenic | 40.0% | |
| ! | ATACCTGATACACACCCTTT+TGG | - | chr1_3:72047696-72047715 | Msa0138820:five_prime_UTR | 40.0% |
| GAGAAGGTGAAGTGTGAAGA+AGG | + | chr1_3:72042455-72042474 | None:intergenic | 45.0% | |
| !!! | GAAACGACGACGTTTTGAGA+AGG | + | chr1_3:72042471-72042490 | None:intergenic | 45.0% |
| TCTCTGTGTTTACGAAGAGG+TGG | + | chr1_3:72042613-72042632 | None:intergenic | 45.0% | |
| ACCTCATCGGAAAATAGACC+CGG | - | chr1_3:72042667-72042686 | Msa0138820:three_prime_UTR | 45.0% | |
| AGCATAATCATGGACCCTGT+TGG | - | chr1_3:72042862-72042881 | Msa0138820:exon | 45.0% | |
| CGGTACTAATTCAGCTTCCT+CGG | + | chr1_3:72043141-72043160 | None:intergenic | 45.0% | |
| !! | GGTGTTCCTTTGGTGATGAA+TGG | - | chr1_3:72043218-72043237 | Msa0138820:CDS | 45.0% |
| ACATACTAACCTTAACCGCG+TGG | + | chr1_3:72043318-72043337 | None:intergenic | 45.0% | |
| AACGCTCTCGTAGCCAAAAT+GGG | + | chr1_3:72043592-72043611 | None:intergenic | 45.0% | |
| TAACGCTCTCGTAGCCAAAA+TGG | + | chr1_3:72043593-72043612 | None:intergenic | 45.0% | |
| AGCAGTTGTAGCGACAATAG+AGG | - | chr1_3:72043621-72043640 | Msa0138820:CDS | 45.0% | |
| GGAAATGTTAACGAGTTCCC+CGG | - | chr1_3:72043670-72043689 | Msa0138820:CDS | 45.0% | |
| GAAATGTTAACGAGTTCCCC+GGG | - | chr1_3:72043671-72043690 | Msa0138820:CDS | 45.0% | |
| !! | AGTTCTTAAAGAGTGTCCCG+GGG | + | chr1_3:72043690-72043709 | None:intergenic | 45.0% |
| CGCACAGCTTATGTATAGAG+AGG | + | chr1_3:72043910-72043929 | None:intergenic | 45.0% | |
| !! | CGACTTGTTGAAAAGCAAGG+AGG | + | chr1_3:72043936-72043955 | None:intergenic | 45.0% |
| TTCCATAGTTAGCGAGACCT+TGG | - | chr1_3:72043958-72043977 | Msa0138820:intron | 45.0% | |
| TGTTTGACCGAAGAACACCA+AGG | + | chr1_3:72043978-72043997 | None:intergenic | 45.0% | |
| ATAATCTCCCTTGACAACCC+TGG | - | chr1_3:72044613-72044632 | Msa0138820:intron | 45.0% | |
| !! | GATACTGGCTTGTTTGAGGA+TGG | - | chr1_3:72044684-72044703 | Msa0138820:intron | 45.0% |
| ATAGACTCCGATACCAACGT+AGG | - | chr1_3:72044737-72044756 | Msa0138820:intron | 45.0% | |
| TCCAGAACCTACGTTGGTAT+CGG | + | chr1_3:72044747-72044766 | None:intergenic | 45.0% | |
| ACTCAATCCAGAACCTACGT+TGG | + | chr1_3:72044753-72044772 | None:intergenic | 45.0% | |
| !! | CCATACAGGCTGATTTTGCA+AGG | + | chr1_3:72044785-72044804 | None:intergenic | 45.0% |
| CCTTGCAAAATCAGCCTGTA+TGG | - | chr1_3:72044782-72044801 | Msa0138820:intron | 45.0% | |
| TGCAAAATCAGCCTGTATGG+TGG | - | chr1_3:72044785-72044804 | Msa0138820:intron | 45.0% | |
| AGAAGGGATATCCACCATAC+AGG | + | chr1_3:72044799-72044818 | None:intergenic | 45.0% | |
| AAGGACAACCTATATGTGGG+AGG | - | chr1_3:72044950-72044969 | Msa0138820:intron | 45.0% | |
| AACCTATATGTGGGAGGAGA+GGG | - | chr1_3:72044956-72044975 | Msa0138820:intron | 45.0% | |
| !! | GGGGAACTCAAAAGTATTGG+AGG | + | chr1_3:72045169-72045188 | None:intergenic | 45.0% |
| ! | AGGAATAGAGAACTCTGGGA+GGG | + | chr1_3:72045241-72045260 | None:intergenic | 45.0% |
| TGGGAGGAATAGAGAACTCT+GGG | + | chr1_3:72045245-72045264 | None:intergenic | 45.0% | |
| !! | TTTTTGGAGATTGGAGGGGA+GGG | + | chr1_3:72045290-72045309 | None:intergenic | 45.0% |
| !!! | TTTTTTGGAGATTGGAGGGG+AGG | + | chr1_3:72045291-72045310 | None:intergenic | 45.0% |
| CACCATTTGGGAGTTTAGGA+GGG | - | chr1_3:72045320-72045339 | Msa0138820:intron | 45.0% | |
| ACCATTTGGGAGTTTAGGAG+GGG | - | chr1_3:72045321-72045340 | Msa0138820:intron | 45.0% | |
| GAGGACATCTAGAGAAAGGA+AGG | - | chr1_3:72045343-72045362 | Msa0138820:intron | 45.0% | |
| TAGTCCCTCAACTGGAATGA+GGG | - | chr1_3:72045390-72045409 | Msa0138820:intron | 45.0% | |
| AAACCCCTCATTCCAGTTGA+GGG | + | chr1_3:72045397-72045416 | None:intergenic | 45.0% | |
| TAAACCCCTCATTCCAGTTG+AGG | + | chr1_3:72045398-72045417 | None:intergenic | 45.0% | |
| ! | TTGTTGGAAGGGGATTTTGG+AGG | - | chr1_3:72045466-72045485 | Msa0138820:intron | 45.0% |
| ! | TGTTGGAAGGGGATTTTGGA+GGG | - | chr1_3:72045467-72045486 | Msa0138820:intron | 45.0% |
| TCTTGCTCTGTTTGGGAGTT+TGG | + | chr1_3:72045667-72045686 | None:intergenic | 45.0% | |
| !! | TGATATGCAAGTGCTGATCG+AGG | + | chr1_3:72045747-72045766 | None:intergenic | 45.0% |
| TCGATCAGCACTTGCATATC+AGG | - | chr1_3:72045746-72045765 | Msa0138820:intron | 45.0% | |
| ! | GCATATCAGGTTGTCTACAG+TGG | - | chr1_3:72045759-72045778 | Msa0138820:intron | 45.0% |
| GTTGTCTACAGTGGGTAAGT+TGG | - | chr1_3:72045768-72045787 | Msa0138820:intron | 45.0% | |
| ! | GTATTGTGACTTGTGAACGG+TGG | + | chr1_3:72046016-72046035 | None:intergenic | 45.0% |
| !! | GTTGCCACTGAGAGAGTATT+CGG | - | chr1_3:72046073-72046092 | Msa0138820:intron | 45.0% |
| GGATGCATGCAATCATGCTT+TGG | - | chr1_3:72046495-72046514 | Msa0138820:intron | 45.0% | |
| GAAATATCAGCTGACCAGGA+GGG | + | chr1_3:72046582-72046601 | None:intergenic | 45.0% | |
| TGAAATATCAGCTGACCAGG+AGG | + | chr1_3:72046583-72046602 | None:intergenic | 45.0% | |
| GCTAATGGCTCGCGATTATA+AGG | + | chr1_3:72046625-72046644 | None:intergenic | 45.0% | |
| !! | CTTTGGCTGGTTTGAATGCT+GGG | - | chr1_3:72046665-72046684 | Msa0138820:intron | 45.0% |
| !! | TTTGGCTGGTTTGAATGCTG+GGG | - | chr1_3:72046666-72046685 | Msa0138820:intron | 45.0% |
| CTCCAGTAAGTCTTCAACTC+TGG | + | chr1_3:72046762-72046781 | None:intergenic | 45.0% | |
| GTGATCTTTCACCTGCAAGT+TGG | - | chr1_3:72046784-72046803 | Msa0138820:intron | 45.0% | |
| TTGACAGGGAATGGAAAGTC+AGG | + | chr1_3:72046973-72046992 | None:intergenic | 45.0% | |
| GTAAAGCTGTTGACAGGGAA+TGG | + | chr1_3:72046982-72047001 | None:intergenic | 45.0% | |
| TGAGATTCAGAAACTCCGTC+TGG | + | chr1_3:72047198-72047217 | None:intergenic | 45.0% | |
| ! | GAGCTGCTGAAAATTGGCTT+AGG | - | chr1_3:72047238-72047257 | Msa0138820:intron | 45.0% |
| GAATTGAGCTGCTTCTGTTG+AGG | + | chr1_3:72047337-72047356 | None:intergenic | 45.0% | |
| GCAGCTCAATTCTCAAACTG+CGG | - | chr1_3:72047345-72047364 | Msa0138820:intron | 45.0% | |
| GATACCGGGAAGGAATACAT+AGG | + | chr1_3:72047371-72047390 | None:intergenic | 45.0% | |
| TATGAAGACACAAGCGATCG+TGG | + | chr1_3:72047449-72047468 | None:intergenic | 45.0% | |
| CAAGCAGGGTTGCTTAACTA+GGG | - | chr1_3:72047476-72047495 | Msa0138820:CDS | 45.0% | |
| AAGCAGGGTTGCTTAACTAG+GGG | - | chr1_3:72047477-72047496 | Msa0138820:CDS | 45.0% | |
| GTTGCTTAACTAGGGGATTC+CGG | - | chr1_3:72047484-72047503 | Msa0138820:CDS | 45.0% | |
| TTGCTTAACTAGGGGATTCC+GGG | - | chr1_3:72047485-72047504 | Msa0138820:CDS | 45.0% | |
| TTTCAAACTTTCCTTCCCCC+CGG | + | chr1_3:72047506-72047525 | None:intergenic | 45.0% | |
| ! | TCACCAAAAGGGTGTGTATC+AGG | + | chr1_3:72047702-72047721 | None:intergenic | 45.0% |
| ! | CGAGTTGTCGATTACGGTTG+CGG | + | chr1_3:72042567-72042586 | None:intergenic | 50.0% |
| CGCAACCGTAATCGACAACT+CGG | - | chr1_3:72042565-72042584 | Msa0138820:three_prime_UTR | 50.0% | |
| ! | TCTCGCCGAGTTGTCGATTA+CGG | + | chr1_3:72042573-72042592 | None:intergenic | 50.0% |
| CTGTGTTTACGAAGAGGTGG+TGG | + | chr1_3:72042610-72042629 | None:intergenic | 50.0% | |
| ! | ACCGGGTCTATTTTCCGATG+AGG | + | chr1_3:72042671-72042690 | None:intergenic | 50.0% |
| GAGCAATCGGAAGAAGAACC+GGG | + | chr1_3:72042688-72042707 | None:intergenic | 50.0% | |
| CGAGCAATCGGAAGAAGAAC+CGG | + | chr1_3:72042689-72042708 | None:intergenic | 50.0% | |
| ATCCCACAAAACCTTCCACG+CGG | - | chr1_3:72043300-72043319 | Msa0138820:intron | 50.0% | |
| !! | AACCGCGTGGAAGGTTTTGT+GGG | + | chr1_3:72043305-72043324 | None:intergenic | 50.0% |
| ! | TAACCGCGTGGAAGGTTTTG+TGG | + | chr1_3:72043306-72043325 | None:intergenic | 50.0% |
| CAAAACCTTCCACGCGGTTA+AGG | - | chr1_3:72043306-72043325 | Msa0138820:intron | 50.0% | |
| ACTAACCTTAACCGCGTGGA+AGG | + | chr1_3:72043314-72043333 | None:intergenic | 50.0% | |
| !! | TTTGGCTACGAGAGCGTTAG+CGG | - | chr1_3:72043594-72043613 | Msa0138820:CDS | 50.0% |
| CACCAAGGTCTCGCTAACTA+TGG | + | chr1_3:72043963-72043982 | None:intergenic | 50.0% | |
| !! | AGCGAGACCTTGGTGTTCTT+CGG | - | chr1_3:72043968-72043987 | Msa0138820:intron | 50.0% |
| CACATTGCAGACAGTGATGC+GGG | + | chr1_3:72044146-72044165 | None:intergenic | 50.0% | |
| CCACATTGCAGACAGTGATG+CGG | + | chr1_3:72044147-72044166 | None:intergenic | 50.0% | |
| TGAGCAACCAGGGTTGTCAA+GGG | + | chr1_3:72044623-72044642 | None:intergenic | 50.0% | |
| ATGAGCAACCAGGGTTGTCA+AGG | + | chr1_3:72044624-72044643 | None:intergenic | 50.0% | |
| TCCGATACCAACGTAGGTTC+TGG | - | chr1_3:72044743-72044762 | Msa0138820:intron | 50.0% | |
| CAACCTATATGTGGGAGGAG+AGG | - | chr1_3:72044955-72044974 | Msa0138820:intron | 50.0% | |
| ACCTATATGTGGGAGGAGAG+GGG | - | chr1_3:72044957-72044976 | Msa0138820:intron | 50.0% | |
| ! | GGAATAGAGAACTCTGGGAG+GGG | + | chr1_3:72045240-72045259 | None:intergenic | 50.0% |
| GAGGAATAGAGAACTCTGGG+AGG | + | chr1_3:72045242-72045261 | None:intergenic | 50.0% | |
| GTGGGAGGAATAGAGAACTC+TGG | + | chr1_3:72045246-72045265 | None:intergenic | 50.0% | |
| AAAAAAGGGGAGGAAGTGGG+AGG | + | chr1_3:72045261-72045280 | None:intergenic | 50.0% | |
| GGGAAAAAAGGGGAGGAAGT+GGG | + | chr1_3:72045264-72045283 | None:intergenic | 50.0% | |
| TGGGAAAAAAGGGGAGGAAG+TGG | + | chr1_3:72045265-72045284 | None:intergenic | 50.0% | |
| GCACCATTTGGGAGTTTAGG+AGG | - | chr1_3:72045319-72045338 | Msa0138820:intron | 50.0% | |
| TCCCCTCCTAAACTCCCAAA+TGG | + | chr1_3:72045325-72045344 | None:intergenic | 50.0% | |
| ATTTGGGAGTTTAGGAGGGG+AGG | - | chr1_3:72045324-72045343 | Msa0138820:intron | 50.0% | |
| AGGGGAGGACATCTAGAGAA+AGG | - | chr1_3:72045339-72045358 | Msa0138820:intron | 50.0% | |
| AGAAAGGGTAGTCCCTCAAC+TGG | - | chr1_3:72045382-72045401 | Msa0138820:intron | 50.0% | |
| GTAGTCCCTCAACTGGAATG+AGG | - | chr1_3:72045389-72045408 | Msa0138820:intron | 50.0% | |
| AGTCCCTCAACTGGAATGAG+GGG | - | chr1_3:72045391-72045410 | Msa0138820:intron | 50.0% | |
| GTTTGGGAGTTTGGAGAGGA+GGG | + | chr1_3:72045658-72045677 | None:intergenic | 50.0% | |
| TGTTTGGGAGTTTGGAGAGG+AGG | + | chr1_3:72045659-72045678 | None:intergenic | 50.0% | |
| CTCTGTTTGGGAGTTTGGAG+AGG | + | chr1_3:72045662-72045681 | None:intergenic | 50.0% | |
| ACGACCGAATACTCTCTCAG+TGG | + | chr1_3:72046080-72046099 | None:intergenic | 50.0% | |
| TCGCGAGCCATTAGCAGATA+AGG | - | chr1_3:72046630-72046649 | Msa0138820:intron | 50.0% | |
| GCAAGATGCTATCCTTTGGC+TGG | - | chr1_3:72046652-72046671 | Msa0138820:intron | 50.0% | |
| CCAGCATTCAAACCAGCCAA+AGG | + | chr1_3:72046667-72046686 | None:intergenic | 50.0% | |
| !! | CCTTTGGCTGGTTTGAATGC+TGG | - | chr1_3:72046664-72046683 | Msa0138820:intron | 50.0% |
| GCACTCAAACTCTGCAGTGT+TGG | + | chr1_3:72046944-72046963 | None:intergenic | 50.0% | |
| GGAATGGAAAGTCAGGAAGC+AGG | + | chr1_3:72046966-72046985 | None:intergenic | 50.0% | |
| GAGGTAGGGACATATCATCC+AGG | - | chr1_3:72047115-72047134 | Msa0138820:intron | 50.0% | |
| ! | TGATGGGCAAGCCCAAAGAT+TGG | + | chr1_3:72047150-72047169 | None:intergenic | 50.0% |
| TGGCACGAGCTGCTGAAAAT+TGG | - | chr1_3:72047232-72047251 | Msa0138820:intron | 50.0% | |
| CAACAGAAGTGATACCGGGA+AGG | + | chr1_3:72047381-72047400 | None:intergenic | 50.0% | |
| GCAAGCAGGGTTGCTTAACT+AGG | - | chr1_3:72047475-72047494 | Msa0138820:CDS | 50.0% | |
| TGCTTAACTAGGGGATTCCG+GGG | - | chr1_3:72047486-72047505 | Msa0138820:CDS | 50.0% | |
| TCTTCAATGTCAGCCACCGG+TGG | - | chr1_3:72042520-72042539 | Msa0138820:three_prime_UTR | 55.0% | |
| GGAATGGAGTGCATATGGGG+CGG | - | chr1_3:72043196-72043215 | Msa0138820:CDS | 55.0% | |
| GAATGGAGTGCATATGGGGC+GGG | - | chr1_3:72043197-72043216 | Msa0138820:CDS | 55.0% | |
| ATATGGGGCGGGTGTTCCTT+TGG | - | chr1_3:72043208-72043227 | Msa0138820:CDS | 55.0% | |
| CCGCATCACTGTCTGCAATG+TGG | - | chr1_3:72044144-72044163 | Msa0138820:intron | 55.0% | |
| TCCCCTCTCCTCCCACATAT+AGG | + | chr1_3:72044961-72044980 | None:intergenic | 55.0% | |
| ATATGTGGGAGGAGAGGGGA+AGG | - | chr1_3:72044961-72044980 | Msa0138820:intron | 55.0% | |
| TATGTGGGAGGAGAGGGGAA+GGG | - | chr1_3:72044962-72044981 | Msa0138820:intron | 55.0% | |
| ! | AGGGGAAGGGAGAGCTTTGT+GGG | - | chr1_3:72044975-72044994 | Msa0138820:intron | 55.0% |
| ! | ATAGAGAACTCTGGGAGGGG+AGG | + | chr1_3:72045237-72045256 | None:intergenic | 55.0% |
| AGGGCTTGGGAAAAAAGGGG+AGG | + | chr1_3:72045271-72045290 | None:intergenic | 55.0% | |
| GGGAGGGCTTGGGAAAAAAG+GGG | + | chr1_3:72045274-72045293 | None:intergenic | 55.0% | |
| GGGGAGGGCTTGGGAAAAAA+GGG | + | chr1_3:72045275-72045294 | None:intergenic | 55.0% | |
| AGGGGAGGGCTTGGGAAAAA+AGG | + | chr1_3:72045276-72045295 | None:intergenic | 55.0% | |
| AGGGAAGGGAATTCCTGTGG+GGG | + | chr1_3:72045639-72045658 | None:intergenic | 55.0% | |
| GAGGGAAGGGAATTCCTGTG+GGG | + | chr1_3:72045640-72045659 | None:intergenic | 55.0% | |
| GGAGGGAAGGGAATTCCTGT+GGG | + | chr1_3:72045641-72045660 | None:intergenic | 55.0% | |
| AGGAGGGAAGGGAATTCCTG+TGG | + | chr1_3:72045642-72045661 | None:intergenic | 55.0% | |
| GGAGTTTGGAGAGGAGGGAA+GGG | + | chr1_3:72045653-72045672 | None:intergenic | 55.0% | |
| GCTATCGCTGCTTGTCTCTC+TGG | + | chr1_3:72046407-72046426 | None:intergenic | 55.0% | |
| ACAAGCAGCGATAGCAGCAG+TGG | - | chr1_3:72046412-72046431 | Msa0138820:intron | 55.0% | |
| ! | TCACTCGGTGAACCCGTTGA+AGG | + | chr1_3:72046541-72046560 | None:intergenic | 55.0% |
| GAGCTCTCGGTCTCTTCACT+CGG | + | chr1_3:72046556-72046575 | None:intergenic | 55.0% | |
| TATCAGCTGACCAGGAGGGT+TGG | + | chr1_3:72046578-72046597 | None:intergenic | 55.0% | |
| ! | ACCTGCAAGTTGGGTTTCGC+TGG | - | chr1_3:72046794-72046813 | Msa0138820:intron | 55.0% |
| ! | CAAGTTGGGTTTCGCTGGCT+TGG | - | chr1_3:72046799-72046818 | Msa0138820:intron | 55.0% |
| ! | CTCTGCAGTGTTGGACCAGT+AGG | + | chr1_3:72046935-72046954 | None:intergenic | 55.0% |
| AGCAGCTCGTGCCAGAGAAT+TGG | + | chr1_3:72047226-72047245 | None:intergenic | 55.0% | |
| GCGGCCTATGTATTCCTTCC+CGG | - | chr1_3:72047364-72047383 | Msa0138820:intron | 55.0% | |
| GCTTAACTAGGGGATTCCGG+GGG | - | chr1_3:72047487-72047506 | Msa0138820:CDS | 55.0% | |
| CTTAACTAGGGGATTCCGGG+GGG | - | chr1_3:72047488-72047507 | Msa0138820:CDS | 55.0% | |
| ATTACGGTTGCGGCTTCCGC+CGG | + | chr1_3:72042557-72042576 | None:intergenic | 60.0% | |
| GAGGGGAAGGGAGAGCTTTG+TGG | - | chr1_3:72044974-72044993 | Msa0138820:intron | 60.0% | |
| ! | GGGGAAGGGAGAGCTTTGTG+GGG | - | chr1_3:72044976-72044995 | Msa0138820:intron | 60.0% |
| TCTGGGAGGGGAGGACTTTG+GGG | + | chr1_3:72045228-72045247 | None:intergenic | 60.0% | |
| ! | CTCTGGGAGGGGAGGACTTT+GGG | + | chr1_3:72045229-72045248 | None:intergenic | 60.0% |
| ! | ACTCTGGGAGGGGAGGACTT+TGG | + | chr1_3:72045230-72045249 | None:intergenic | 60.0% |
| GAGATTGGAGGGGAGGGCTT+GGG | + | chr1_3:72045284-72045303 | None:intergenic | 60.0% | |
| AAGGGAATTCCTGTGGGGGG+AGG | + | chr1_3:72045635-72045654 | None:intergenic | 60.0% | |
| GGGAAGGGAATTCCTGTGGG+GGG | + | chr1_3:72045638-72045657 | None:intergenic | 60.0% | |
| GGGAGTTTGGAGAGGAGGGA+AGG | + | chr1_3:72045654-72045673 | None:intergenic | 60.0% | |
| ACCAGGAGGGTTGGAGCTCT+CGG | + | chr1_3:72046569-72046588 | None:intergenic | 60.0% | |
| GCCAGCGAAACCCAACTTGC+AGG | + | chr1_3:72046798-72046817 | None:intergenic | 60.0% | |
| CTGGGAGGGGAGGACTTTGG+GGG | + | chr1_3:72045227-72045246 | None:intergenic | 65.0% | |
| GGAGATTGGAGGGGAGGGCT+TGG | + | chr1_3:72045285-72045304 | None:intergenic | 65.0% | |
| GGAATTCCTGTGGGGGGAGG+AGG | + | chr1_3:72045632-72045651 | None:intergenic | 65.0% | |
| ACCGAGAGCTCCAACCCTCC+TGG | - | chr1_3:72046565-72046584 | Msa0138820:intron | 65.0% | |
| ACTAGGGGATTCCGGGGGGA+AGG | - | chr1_3:72047492-72047511 | Msa0138820:CDS | 65.0% | |
| CCTGTGGGGGGAGGAGGAGA+GGG | + | chr1_3:72045626-72045645 | None:intergenic | 70.0% | |
| TCCTGTGGGGGGAGGAGGAG+AGG | + | chr1_3:72045627-72045646 | None:intergenic | 70.0% | |
| ACCGGTGGCGCTGCCATCGC+CGG | - | chr1_3:72042535-72042554 | Msa0138820:three_prime_UTR | 75.0% | |
| GTTGCGGCTTCCGCCGGCGA+TGG | + | chr1_3:72042551-72042570 | None:intergenic | 75.0% | |
| CCCTCTCCTCCTCCCCCCAC+AGG | - | chr1_3:72045623-72045642 | Msa0138820:intron | 75.0% | |
| ! | GGCGATGGCAGCGCCACCGG+TGG | + | chr1_3:72042536-72042555 | None:intergenic | 80.0% |
| ! | GCCGGCGATGGCAGCGCCAC+CGG | + | chr1_3:72042539-72042558 | None:intergenic | 80.0% |
| ! | GGTGGCGCTGCCATCGCCGG+CGG | - | chr1_3:72042538-72042557 | Msa0138820:three_prime_UTR | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 72042373 | 72047819 | 72042373 | ID=Msa0138820;Name=Msa0138820 |
| chr1_3 | mRNA | 72042373 | 72047819 | 72042373 | ID=Msa0138820-mRNA-1;Parent=Msa0138820;Name=Msa0138820-mRNA-1;_AED=0.07;_eAED=0.07;_QI=153|0.8|0.83|1|1|1|6|496|408 |
| chr1_3 | exon | 72042373 | 72043113 | 72042373 | ID=Msa0138820-mRNA-1:exon:25129;Parent=Msa0138820-mRNA-1 |
| chr1_3 | exon | 72043188 | 72043279 | 72043188 | ID=Msa0138820-mRNA-1:exon:25128;Parent=Msa0138820-mRNA-1 |
| chr1_3 | exon | 72043372 | 72043457 | 72043372 | ID=Msa0138820-mRNA-1:exon:25127;Parent=Msa0138820-mRNA-1 |
| chr1_3 | exon | 72043502 | 72043820 | 72043502 | ID=Msa0138820-mRNA-1:exon:25126;Parent=Msa0138820-mRNA-1 |
| chr1_3 | exon | 72046865 | 72047076 | 72046865 | ID=Msa0138820-mRNA-1:exon:25125;Parent=Msa0138820-mRNA-1 |
| chr1_3 | exon | 72047394 | 72047819 | 72047394 | ID=Msa0138820-mRNA-1:exon:25124;Parent=Msa0138820-mRNA-1 |
| chr1_3 | five_prime_UTR | 72047667 | 72047819 | 72047667 | ID=Msa0138820-mRNA-1:five_prime_utr;Parent=Msa0138820-mRNA-1 |
| chr1_3 | CDS | 72047394 | 72047666 | 72047394 | ID=Msa0138820-mRNA-1:cds;Parent=Msa0138820-mRNA-1 |
| chr1_3 | CDS | 72046865 | 72047076 | 72046865 | ID=Msa0138820-mRNA-1:cds;Parent=Msa0138820-mRNA-1 |
| chr1_3 | CDS | 72043502 | 72043820 | 72043502 | ID=Msa0138820-mRNA-1:cds;Parent=Msa0138820-mRNA-1 |
| chr1_3 | CDS | 72043372 | 72043457 | 72043372 | ID=Msa0138820-mRNA-1:cds;Parent=Msa0138820-mRNA-1 |
| chr1_3 | CDS | 72043188 | 72043279 | 72043188 | ID=Msa0138820-mRNA-1:cds;Parent=Msa0138820-mRNA-1 |
| chr1_3 | CDS | 72042869 | 72043113 | 72042869 | ID=Msa0138820-mRNA-1:cds;Parent=Msa0138820-mRNA-1 |
| chr1_3 | three_prime_UTR | 72042373 | 72042868 | 72042373 | ID=Msa0138820-mRNA-1:three_prime_utr;Parent=Msa0138820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
