AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0687000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0687000 MtrunA17_Chr4g0037201 98.047 512 10 0 1 512 1 512 0.0 1038
Msa0687000 MtrunA17_Chr8g0384661 66.871 489 151 4 24 512 17 494 0.0 684
Msa0687000 MtrunA17_Chr1g0159761 66.736 478 152 2 36 512 4 475 0.0 669
Msa0687000 MtrunA17_Chr3g0125081 64.792 480 160 2 34 512 8 479 0.0 665
Msa0687000 MtrunA17_Chr3g0125091 64.570 477 159 3 38 512 12 480 0.0 656
Msa0687000 MtrunA17_Chr3g0125101 63.941 477 162 3 38 512 12 480 0.0 649
Msa0687000 MtrunA17_Chr3g0130651 64.211 475 158 4 34 508 2 464 0.0 610
Msa0687000 MtrunA17_Chr3g0130641 60.768 469 172 3 44 512 21 477 0.0 602
Msa0687000 MtrunA17_Chr3g0140761 58.009 462 188 2 49 509 23 479 0.0 582
Msa0687000 MtrunA17_Chr1g0146491 57.143 462 192 2 49 509 13 469 0.0 575
Msa0687000 MtrunA17_Chr1g0206871 51.620 463 209 3 58 511 14 470 0.0 531
Msa0687000 MtrunA17_Chr3g0103231 49.889 451 218 1 49 499 13 455 2.23e-175 501
Msa0687000 MtrunA17_Chr3g0103221 50.448 446 213 1 56 501 27 464 3.72e-172 493
Msa0687000 MtrunA17_Chr3g0103211 48.729 472 224 4 29 499 1 455 1.14e-171 492
Msa0687000 MtrunA17_Chr3g0140531 49.041 469 233 2 40 508 5 467 1.66e-164 474
Msa0687000 MtrunA17_Chr5g0447221 46.105 475 232 5 29 499 7 461 1.31e-160 464
Msa0687000 MtrunA17_Chr1g0146411 48.125 480 235 5 30 509 5 470 2.59e-159 461
Msa0687000 MtrunA17_Chr3g0103271 50.000 448 215 2 53 499 21 460 4.55e-157 455
Msa0687000 MtrunA17_Chr3g0140541 47.771 471 236 3 38 508 6 466 3.19e-150 437
Msa0687000 MtrunA17_Chr1g0146331 45.295 457 241 4 53 508 14 462 3.80e-147 430
Msa0687000 MtrunA17_Chr2g0293331 45.952 457 239 3 52 508 5 453 1.49e-146 428
Msa0687000 MtrunA17_Chr1g0146391 44.639 457 245 3 53 509 6 454 1.54e-145 425
Msa0687000 MtrunA17_Chr1g0206851 51.752 371 167 3 140 509 19 378 1.71e-145 422
Msa0687000 MtrunA17_Chr5g0447231 45.169 445 235 2 58 501 24 460 3.02e-140 412
Msa0687000 MtrunA17_Chr1g0206831 49.708 342 160 3 164 504 6 336 9.65e-128 375
Msa0687000 MtrunA17_Chr5g0402151 62.126 301 75 4 62 362 3 264 3.92e-123 361
Msa0687000 MtrunA17_Chr3g0103251 46.240 359 156 2 172 501 20 370 3.65e-120 357
Msa0687000 MtrunA17_Chr3g0130671 63.229 223 82 0 49 271 29 251 3.74e-98 298
Msa0687000 MtrunA17_Chr1g0206821 57.466 221 94 0 291 511 310 530 1.05e-92 292
Msa0687000 MtrunA17_Chr1g0206821 54.286 245 106 2 52 295 15 254 1.66e-86 276
Msa0687000 MtrunA17_Chr3g0130661 59.016 183 72 1 329 511 1 180 5.89e-77 239
Msa0687000 MtrunA17_Chr6g0458931 29.268 492 281 16 38 506 5 452 3.89e-51 181
Msa0687000 MtrunA17_Chr2g0331721 28.283 495 309 12 17 505 3 457 5.68e-47 169
Msa0687000 MtrunA17_Chr8g0376991 28.384 458 277 11 59 509 23 436 3.11e-45 164
Msa0687000 MtrunA17_Chr6g0458921 31.209 455 261 14 60 506 15 425 2.85e-44 161
Msa0687000 MtrunA17_Chr4g0057851 28.571 448 261 15 70 506 21 420 9.46e-44 160
Msa0687000 MtrunA17_Chr6g0459031 30.989 455 262 14 60 506 15 425 1.43e-43 159
Msa0687000 MtrunA17_Chr1g0184721 27.140 479 296 14 36 508 6 437 9.60e-40 149
Msa0687000 MtrunA17_Chr2g0328081 29.167 480 273 15 38 506 2 425 9.04e-39 146
Msa0687000 MtrunA17_Chr5g0422741 29.114 474 278 16 40 505 12 435 3.25e-38 145
Msa0687000 MtrunA17_Chr6g0459001 28.898 481 280 14 59 506 22 473 6.33e-37 142
Msa0687000 MtrunA17_Chr7g0230011 28.200 461 266 13 60 506 31 440 6.46e-37 141
Msa0687000 MtrunA17_Chr6g0459011 28.111 434 267 9 75 504 1 393 2.02e-36 139
Msa0687000 MtrunA17_Chr6g0459021 26.707 498 293 15 26 506 2 444 2.31e-36 140
Msa0687000 MtrunA17_Chr3g0103261 48.872 133 67 1 49 181 13 144 4.76e-36 131
Msa0687000 MtrunA17_Chr3g0077651 28.634 454 277 9 60 506 53 466 1.55e-35 138
Msa0687000 MtrunA17_Chr3g0122921 26.423 492 271 18 38 508 6 427 3.62e-35 136
Msa0687000 MtrunA17_Chr1g0206861 61.224 98 38 0 48 145 10 107 1.80e-33 124
Msa0687000 MtrunA17_Chr1g0198531 26.033 484 291 13 33 506 8 434 3.43e-33 131
Msa0687000 MtrunA17_Chr1g0206841 59.406 101 38 1 40 140 5 102 3.98e-33 121
Msa0687000 MtrunA17_Chr1g0198541 26.866 469 280 13 50 506 17 434 9.21e-33 129
Msa0687000 MtrunA17_Chr3g0143701 25.055 451 291 14 60 499 85 499 6.50e-31 125
Msa0687000 MtrunA17_Chr1g0146351 56.863 102 43 1 70 171 14 114 2.81e-30 114
Msa0687000 MtrunA17_Chr4g0027241 25.662 491 302 19 36 508 14 459 1.04e-28 118
Msa0687000 MtrunA17_Chr1g0198081 25.541 462 298 14 58 511 58 481 5.13e-27 114
Msa0687000 MtrunA17_Chr8g0387941 24.319 477 299 17 53 511 18 450 2.36e-26 111
Msa0687000 MtrunA17_Chr4g0038711 24.301 465 301 13 60 507 71 501 3.55e-25 108
Msa0687000 MtrunA17_Chr5g0406351 25.054 459 286 17 59 501 107 523 4.84e-24 105
Msa0687000 MtrunA17_Chr5g0436281 25.641 429 257 14 90 508 4 380 4.94e-22 97.8
Msa0687000 MtrunA17_Chr1g0159751 69.231 52 16 0 308 359 1 52 1.47e-17 77.4
Msa0687000 MtrunA17_Chr3g0112971 26.214 412 246 15 105 508 72 433 1.52e-16 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0687000 AT5G09220.1 71.429 469 126 3 45 512 32 493 0.0 721
Msa0687000 AT5G63850.1 70.905 464 128 2 50 512 9 466 0.0 700
Msa0687000 AT1G77380.1 68.534 464 140 1 49 512 19 476 0.0 665
Msa0687000 AT1G44100.1 63.445 476 173 1 38 512 5 480 0.0 652
Msa0687000 AT1G10010.2 56.399 461 196 1 50 510 19 474 0.0 570
Msa0687000 AT1G10010.1 56.399 461 196 1 50 510 18 473 0.0 569
Msa0687000 AT5G49630.1 56.129 465 197 3 47 509 20 479 0.0 555
Msa0687000 AT1G58360.1 51.653 484 229 1 27 510 4 482 0.0 552
Msa0687000 AT5G23810.1 48.620 471 227 5 34 499 2 462 8.85e-147 429
Msa0687000 AT5G23810.2 50.432 347 159 4 34 377 2 338 1.00e-108 328
Msa0687000 AT5G23810.4 46.792 265 128 4 34 295 2 256 7.00e-71 227
Msa0687000 AT5G23810.5 46.919 211 107 3 34 241 2 210 4.45e-56 187
Msa0687000 AT5G23810.3 46.919 211 107 3 34 241 2 210 4.45e-56 187
Msa0687000 AT1G24400.1 27.254 488 290 12 36 508 3 440 1.58e-45 166
Msa0687000 AT5G40780.1 27.391 460 271 11 60 506 34 443 1.92e-43 160
Msa0687000 AT1G48640.1 26.585 489 300 12 33 509 12 453 5.43e-43 159
Msa0687000 AT3G01760.1 28.477 453 272 13 60 503 32 441 1.08e-39 150
Msa0687000 AT5G40780.3 27.191 445 261 11 75 506 1 395 2.54e-39 147
Msa0687000 AT5G40780.2 27.191 445 261 11 75 506 1 395 2.54e-39 147
Msa0687000 AT1G67640.1 27.887 459 274 13 60 508 29 440 4.12e-38 145
Msa0687000 AT1G61270.1 27.193 456 273 12 60 503 34 442 2.50e-37 143
Msa0687000 AT1G71680.1 26.585 489 291 12 38 508 9 447 1.75e-36 140
Msa0687000 AT1G25530.1 29.139 453 274 11 59 506 27 437 2.78e-33 131
Msa0687000 AT1G71680.2 27.945 365 212 11 38 384 9 340 2.22e-31 125
Msa0687000 AT1G08230.2 27.623 467 278 16 58 508 26 448 2.22e-27 115
Msa0687000 AT5G41800.1 24.262 474 290 16 58 511 25 449 1.87e-23 103
Msa0687000 AT2G36590.1 24.719 445 272 17 29 465 1 390 1.75e-19 91.3
Msa0687000 AT2G39890.2 24.062 453 286 17 65 508 36 439 2.60e-18 87.8
Msa0687000 AT2G39890.1 24.062 453 286 17 65 508 36 439 2.60e-18 87.8
Msa0687000 AT3G55740.1 25.000 492 296 22 30 508 5 436 3.15e-18 87.4
Msa0687000 AT2G39890.3 23.709 426 269 15 90 508 4 380 6.21e-18 86.3
Msa0687000 AT3G55740.2 25.641 429 257 18 90 508 4 380 1.16e-17 85.5
Msa0687000 AT3G55740.3 25.641 429 257 18 90 508 4 380 1.16e-17 85.5
Msa0687000 AT1G08230.4 31.349 252 136 10 270 508 102 329 1.33e-17 84.3
Msa0687000 AT1G08230.6 31.349 252 136 10 270 508 102 329 1.33e-17 84.3
Msa0687000 AT1G08230.5 31.349 252 136 10 270 508 102 329 1.33e-17 84.3
Msa0687000 AT1G08230.3 31.349 252 136 10 270 508 121 348 2.92e-17 83.6
Msa0687000 AT4G35180.1 23.779 471 294 12 32 482 24 449 2.97e-16 81.6
Msa0687000 AT1G47670.1 24.190 463 299 15 59 507 93 517 2.97e-14 75.5
Msa0687000 AT4G35180.2 25.392 319 202 7 32 338 24 318 6.56e-13 70.5
Msa0687000 AT2G36590.2 25.568 352 214 15 29 372 1 312 2.40e-11 65.5

Find 117 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGTCTCAGTTTGGATTT+TGG 0.149290 4_4:-51653912 None:intergenic
TTGAATTTCAATGAGGATAA+TGG 0.220587 4_4:-51655405 None:intergenic
TTCAGAAGGAGGAGACTTTA+AGG 0.234915 4_4:-51655522 None:intergenic
CTGGAGTGCTTTCATTGGCT+TGG 0.244355 4_4:+51654171 Msa0687000:CDS
TTGGATTCTATAACCCTTAT+TGG 0.244673 4_4:+51655669 Msa0687000:CDS
ATCCATTGCTGGAGTGGTTT+TGG 0.246912 4_4:+51656518 Msa0687000:CDS
GTTGGAATACTTGGAGCTTT+TGG 0.258162 4_4:+51656357 Msa0687000:CDS
GGACATGATAGCTGCAACTA+TGG 0.263574 4_4:-51655113 None:intergenic
CTAGGAAGTGTTCTACTTCT+TGG 0.264874 4_4:-51653735 None:intergenic
GCTGTCACAAAATTATTCTT+TGG 0.273989 4_4:-51656207 None:intergenic
ATTGGGTAATAAACTGTTAA+AGG 0.276366 4_4:-51656387 None:intergenic
TCAATTTCTTCCGCTTAGTA+TGG 0.277518 4_4:+51656271 Msa0687000:CDS
ACTTATTCTGCAGTTGGATT+AGG 0.281638 4_4:+51655139 Msa0687000:CDS
TGTGAAATATACATGTCTAT+TGG 0.291402 4_4:-51656405 None:intergenic
GTGAAATATACATGTCTATT+GGG 0.296365 4_4:-51656404 None:intergenic
TTGATCAAAGTCTGGGATTT+GGG 0.299517 4_4:-51655077 None:intergenic
AGAACAGATGACTCTGTTAA+TGG 0.303497 4_4:+51654290 Msa0687000:CDS
CTTGATCAAAGTCTGGGATT+TGG 0.326018 4_4:-51655078 None:intergenic
TGTTTCTTAGGGCAATTAAA+AGG 0.327651 4_4:+51654960 Msa0687000:intron
TGGAGTGCTTTCATTGGCTT+GGG 0.340533 4_4:+51654172 Msa0687000:CDS
GCAATGTCAAGAAGCCAATA+AGG 0.342161 4_4:-51655683 None:intergenic
GCAATTGTTGTGCACTTAGT+TGG 0.345019 4_4:+51655713 Msa0687000:CDS
GGTGTATTGCAGGAACATTT+TGG 0.352855 4_4:+51654111 Msa0687000:intron
TGAACACAAGACCATGAAAA+AGG 0.355176 4_4:+51655541 Msa0687000:CDS
GTTACAAGGACTAATTTCTA+TGG 0.355249 4_4:+51656744 Msa0687000:three_prime_UTR
TCACTGGCACACAGAAAATA+TGG 0.358100 4_4:+51655336 Msa0687000:CDS
CAATTGTTGTGCACTTAGTT+GGG 0.358372 4_4:+51655714 Msa0687000:CDS
CATATTATCACTGCTGTGAT+AGG 0.360414 4_4:+51654146 Msa0687000:CDS
GATGCAGTAAAGTCTATCTT+AGG 0.361901 4_4:+51654335 Msa0687000:CDS
CTGTGTGCCAGTGACTGTTC+CGG 0.370439 4_4:-51655327 None:intergenic
TATGCTTGAACCTGCAACTT+TGG 0.370453 4_4:-51655173 None:intergenic
GGCAATAGCTCAGCTTGGTT+GGG 0.371439 4_4:+51654193 Msa0687000:CDS
TCCCAGACTTTGATCAAGTA+TGG 0.373754 4_4:+51655083 Msa0687000:CDS
GGGCAATAGCTCAGCTTGGT+TGG 0.375371 4_4:+51654192 Msa0687000:CDS
GCTGCTGTTGGATCCATTGC+TGG 0.376547 4_4:+51656507 Msa0687000:CDS
AATGATGTGGTTGGAATACT+TGG 0.378175 4_4:+51656348 Msa0687000:CDS
CACCATACTTGATCAAAGTC+TGG 0.378867 4_4:-51655085 None:intergenic
CTAGGCATCGCCAAAGTTGC+AGG 0.384071 4_4:+51655163 Msa0687000:CDS
AGGCTCTGGAGTGCTTTCAT+TGG 0.387217 4_4:+51654166 Msa0687000:CDS
GTCGAAGCACTTGGAATAGT+TGG 0.391776 4_4:-51653951 None:intergenic
TCCTTCACTTATTCTGCAGT+TGG 0.394941 4_4:+51655133 Msa0687000:CDS
ATTCAGTATGTGAATCTGTT+TGG 0.402010 4_4:+51654475 Msa0687000:CDS
AGACTGATTCAGTCTCAGTT+TGG 0.403667 4_4:-51653919 None:intergenic
AAACCAGTCAAAAGATTTCC+AGG 0.403962 4_4:-51655647 None:intergenic
GCTCAGCTTGGTTGGGCTGT+TGG 0.410253 4_4:+51654200 Msa0687000:CDS
GGCATGGGTTATGCAGCCTT+TGG 0.414032 4_4:+51655614 Msa0687000:CDS
AATCTGTTTGGAATTGCAAT+TGG 0.419799 4_4:+51654487 Msa0687000:CDS
TATATTTCACAAAAGAAGAT+TGG 0.422296 4_4:+51656417 Msa0687000:CDS
CTTGGAATAGTTGGGCTCAA+TGG 0.435400 4_4:-51653942 None:intergenic
TTTGCACTTCAGATGCTTAG+TGG 0.435901 4_4:+51656459 Msa0687000:CDS
AAAATTTCAAGGAAGCTTGA+TGG 0.436014 4_4:+51655277 Msa0687000:CDS
CACAAAAGAAGATTGGTAGA+TGG 0.438960 4_4:+51656424 Msa0687000:CDS
TCTGCAGTTGGATTAGGTCT+AGG 0.439412 4_4:+51655145 Msa0687000:CDS
GTGCACAACAATTGCAAAGT+TGG 0.444851 4_4:-51655705 None:intergenic
ATTTCAATATTAGCTGCTGT+TGG 0.447054 4_4:+51656495 Msa0687000:CDS
ATCACTGCTGTGATAGGCTC+TGG 0.458270 4_4:+51654152 Msa0687000:CDS
TTCAATGAGGATAATGGAAA+AGG 0.458924 4_4:-51655399 None:intergenic
TGTATCCATTGCTTGACATA+TGG 0.461416 4_4:-51655021 None:intergenic
TTCATGGTCTTGTGTTCAGA+AGG 0.465842 4_4:-51655536 None:intergenic
ATAGAAAATGGAAAATTTCA+AGG 0.466520 4_4:+51655266 Msa0687000:intron
TATTTACTATGTGGTGGCAT+GGG 0.466716 4_4:+51655599 Msa0687000:CDS
CTATTTACTATGTGGTGGCA+TGG 0.467141 4_4:+51655598 Msa0687000:CDS
ACTAATTTCTATGGTCTAAG+AGG 0.476906 4_4:+51656753 Msa0687000:three_prime_UTR
GCACTTAGTTGGGGCATACC+AGG 0.483844 4_4:+51655724 Msa0687000:CDS
GCCTTTGGAGATCATGTACC+TGG 0.484040 4_4:+51655629 Msa0687000:CDS
GAGTTGGTACACACCAATGC+AGG 0.487979 4_4:-51656250 None:intergenic
AAATTTCAAGGAAGCTTGAT+GGG 0.493759 4_4:+51655278 Msa0687000:CDS
TCGAAGCACTTGGAATAGTT+GGG 0.495734 4_4:-51653950 None:intergenic
GCGAAGAGAATCATGACAAC+AGG 0.499921 4_4:-51654224 None:intergenic
TGTTGGATCCATTGCTGGAG+TGG 0.501226 4_4:+51656512 Msa0687000:CDS
CAATGTCAAGAAGCCAATAA+GGG 0.505504 4_4:-51655682 None:intergenic
GATGGTCGCCTCAAGAGAAC+AGG 0.506003 4_4:+51653977 Msa0687000:CDS
GCTTGGGCAATAGCTCAGCT+TGG 0.509406 4_4:+51654188 Msa0687000:CDS
ACACAAGCCGGAACAGTCAC+TGG 0.511407 4_4:+51655320 Msa0687000:CDS
ACCATCGTCGTCGAAGCACT+TGG 0.513005 4_4:-51653960 None:intergenic
TGTGCCACTTTGAAGTTACA+AGG 0.522675 4_4:+51656730 Msa0687000:three_prime_UTR
GGAGGAGTTTACAAGCTCTA+GGG 0.530559 4_4:+51655357 Msa0687000:CDS
TGGAGGAGTTTACAAGCTCT+AGG 0.533735 4_4:+51655356 Msa0687000:CDS
ATCCAAAACCACTCCAGCAA+TGG 0.538718 4_4:-51656520 None:intergenic
AGCTTGATGGGAATTAGCAT+TGG 0.538971 4_4:+51655290 Msa0687000:CDS
ATTGGTGCGGTGACACAAGC+CGG 0.545386 4_4:+51655308 Msa0687000:CDS
GAAATACATATTCCCTGCAT+TGG 0.545635 4_4:+51656237 Msa0687000:CDS
TTTCAGACACTACTTAGAAG+TGG 0.545928 4_4:+51653880 Msa0687000:CDS
TTTACAAGCTCTAGGGGCAA+TGG 0.553880 4_4:+51655364 Msa0687000:CDS
AGAAGTGGAGTTCACGTAAG+TGG 0.555074 4_4:+51656184 Msa0687000:CDS
GAGGATAATGGAAAAGGAGT+AGG 0.556091 4_4:-51655393 None:intergenic
ATTTCTTCCGCTTAGTATGG+AGG 0.558949 4_4:+51656274 Msa0687000:CDS
ACAGTGTTCTATTTACTATG+TGG 0.563522 4_4:+51655590 Msa0687000:CDS
ATGGTCTTGTGTTCAGAAGG+AGG 0.564496 4_4:-51655533 None:intergenic
GTCTTTGCTAAAAGTGAATG+TGG 0.568057 4_4:-51653665 None:intergenic
ATGTTGAACCTGTTCTCTTG+AGG 0.568328 4_4:-51653985 None:intergenic
ACCATACTTGATCAAAGTCT+GGG 0.568824 4_4:-51655084 None:intergenic
AATTGTTGTGCACTTAGTTG+GGG 0.569503 4_4:+51655715 Msa0687000:CDS
CCATGCCATATGTCAAGCAA+TGG 0.571445 4_4:+51655016 Msa0687000:CDS
AATTGTTATCATGAGAGTCA+TGG 0.575521 4_4:+51654986 Msa0687000:CDS
TCCAAGTGCTTCGACGACGA+TGG 0.576041 4_4:+51653959 Msa0687000:CDS
ACTCCATGTTGAAATCTGCT+AGG 0.577936 4_4:-51653753 None:intergenic
CCATTGCTTGACATATGGCA+TGG 0.582704 4_4:-51655016 None:intergenic
TAATTACTTGAATTTCAATG+AGG 0.589061 4_4:-51655412 None:intergenic
GTGTTCTATTTACTATGTGG+TGG 0.593769 4_4:+51655593 Msa0687000:CDS
AACTATGATGCTCACCAAAG+TGG 0.602438 4_4:-51655564 None:intergenic
TAGTCCTTGTAACTTCAAAG+TGG 0.607640 4_4:-51656734 None:intergenic
CAGCTAATATTGAAATGATG+AGG 0.607869 4_4:-51656488 None:intergenic
TCCAACTGCAGAATAAGTGA+AGG 0.609438 4_4:-51655134 None:intergenic
TCCAGGTACATGATCTCCAA+AGG 0.613687 4_4:-51655630 None:intergenic
CTAAGCGGAAGAAATTGAGT+TGG 0.621124 4_4:-51656266 None:intergenic
AGTTGGTACACACCAATGCA+GGG 0.642172 4_4:-51656249 None:intergenic
CTTCCTAGCAGATTTCAACA+TGG 0.642728 4_4:+51653750 Msa0687000:CDS
GAGGAGTTTACAAGCTCTAG+GGG 0.643999 4_4:+51655358 Msa0687000:CDS
AACTCACATCATACTAACTG+AGG 0.651693 4_4:-51654524 None:intergenic
TTCTATAACAGACAGAAGAG+AGG 0.662581 4_4:+51653852 Msa0687000:intron
GTACAAGTGAGTGTGATGAA+TGG 0.668186 4_4:-51653687 None:intergenic
CAGACTTTGATCAAGTATGG+TGG 0.668858 4_4:+51655086 Msa0687000:CDS
GATGGGAATTAGCATTGGTG+CGG 0.687311 4_4:+51655295 Msa0687000:CDS
AGAGTGTCCTCCATACTAAG+CGG 0.698286 4_4:-51656281 None:intergenic
CTGGCACACAGAAAATATGG+AGG 0.722683 4_4:+51655339 Msa0687000:CDS
AGAAGTGTAAAGATTGACGA+CGG 0.735870 4_4:-51654246 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTATTTTTTTTATCATC+AGG - chr4_4:51654080-51654099 None:intergenic 10.0%
!! TATGAAAATTAATCATTTAA+GGG + chr4_4:51654822-51654841 Msa0687000:intron 10.0%
!!! TTAAGTTGATTATATAAAAA+CGG - chr4_4:51655767-51655786 None:intergenic 10.0%
!! ATAAAAACAACTTATTTATA+TGG - chr4_4:51655893-51655912 None:intergenic 10.0%
!! AAAATAAATAAAGAATCAAC+TGG + chr4_4:51654090-51654109 Msa0687000:intron 15.0%
!! GTATGAAAATTAATCATTTA+AGG + chr4_4:51654821-51654840 Msa0687000:intron 15.0%
!!! ATTTTTCATCATATAGAAAA+TGG + chr4_4:51655254-51655273 Msa0687000:intron 15.0%
!! AATAAGATACAAATTATGTA+TGG - chr4_4:51656026-51656045 None:intergenic 15.0%
!! TTAGTTTATATTTAGAAGTT+GGG - chr4_4:51656085-51656104 None:intergenic 15.0%
!!! TTTAGTTTATATTTAGAAGT+TGG - chr4_4:51656086-51656105 None:intergenic 15.0%
!!! AAAAAATGATAAGTTTGTTT+TGG + chr4_4:51656615-51656634 Msa0687000:three_prime_UTR 15.0%
!! CACTTCAAACTTTAAATTTA+TGG + chr4_4:51654040-51654059 Msa0687000:intron 20.0%
!! CAAAAACAAATCATCAATAT+AGG - chr4_4:51654929-51654948 None:intergenic 20.0%
!! ATAGAAAATGGAAAATTTCA+AGG + chr4_4:51655266-51655285 Msa0687000:intron 20.0%
!! TAATTACTTGAATTTCAATG+AGG - chr4_4:51655415-51655434 None:intergenic 20.0%
!! ACAACTTATTTATATGGAAA+CGG - chr4_4:51655887-51655906 None:intergenic 20.0%
!! TTTCTATATTGTATTGTGTT+AGG + chr4_4:51656131-51656150 Msa0687000:intron 20.0%
!! ATTAAAAAATGGTAATAGCA+TGG - chr4_4:51656331-51656350 None:intergenic 20.0%
!!! ATTACCATTTTTTAATGATG+TGG + chr4_4:51656335-51656354 Msa0687000:CDS 20.0%
!! TATATTTCACAAAAGAAGAT+TGG + chr4_4:51656417-51656436 Msa0687000:CDS 20.0%
!!! ACTTAATAACTAGTTTTGAA+TGG - chr4_4:51656561-51656580 None:intergenic 20.0%
!! AAGTGAATGTGGATTTTTAT+AGG - chr4_4:51653657-51653676 None:intergenic 25.0%
! AGCATATGACATTAGAATAT+TGG - chr4_4:51653799-51653818 None:intergenic 25.0%
!!! TTGATCATGTCATTGTTTTT+TGG + chr4_4:51654417-51654436 Msa0687000:intron 25.0%
!! TATCAATCAGAATTTTCTTG+AGG - chr4_4:51654631-51654650 None:intergenic 25.0%
!! CATAGATCAAATTTTCGATA+TGG - chr4_4:51654793-51654812 None:intergenic 25.0%
! CATATCGAAAATTTGATCTA+TGG + chr4_4:51654791-51654810 Msa0687000:intron 25.0%
! TTGAATTTCAATGAGGATAA+TGG - chr4_4:51655408-51655427 None:intergenic 25.0%
! GATACAAATTATGTATGGAT+TGG - chr4_4:51656021-51656040 None:intergenic 25.0%
! CTCAAAAGTTAGTATCTTAT+TGG + chr4_4:51656049-51656068 Msa0687000:intron 25.0%
! TTCTCAACAAATGCAAAAAA+GGG - chr4_4:51656168-51656187 None:intergenic 25.0%
! ATTGGGTAATAAACTGTTAA+AGG - chr4_4:51656390-51656409 None:intergenic 25.0%
! GTGAAATATACATGTCTATT+GGG - chr4_4:51656407-51656426 None:intergenic 25.0%
! TGTGAAATATACATGTCTAT+TGG - chr4_4:51656408-51656427 None:intergenic 25.0%
ACATGTAATGTAGTCATGTT+TGG + chr4_4:51654373-51654392 Msa0687000:intron 30.0%
!!! TGTCATTGTTTTTTGGTTTC+AGG + chr4_4:51654424-51654443 Msa0687000:intron 30.0%
GGAAAAAAGTTCAAAATGTG+TGG + chr4_4:51654448-51654467 Msa0687000:CDS 30.0%
ATTCAGTATGTGAATCTGTT+TGG + chr4_4:51654475-51654494 Msa0687000:CDS 30.0%
! AATCTGTTTGGAATTGCAAT+TGG + chr4_4:51654487-51654506 Msa0687000:CDS 30.0%
TAAGAGTTACACTACTTAGT+TGG + chr4_4:51654665-51654684 Msa0687000:intron 30.0%
! TGATTTGCAAGACATTGATA+TGG - chr4_4:51654855-51654874 None:intergenic 30.0%
TGTTTCTTAGGGCAATTAAA+AGG + chr4_4:51654960-51654979 Msa0687000:intron 30.0%
AATTGTTATCATGAGAGTCA+TGG + chr4_4:51654986-51655005 Msa0687000:CDS 30.0%
AAAATTTCAAGGAAGCTTGA+TGG + chr4_4:51655277-51655296 Msa0687000:CDS 30.0%
AAATTTCAAGGAAGCTTGAT+GGG + chr4_4:51655278-51655297 Msa0687000:CDS 30.0%
!! TTCAATGAGGATAATGGAAA+AGG - chr4_4:51655402-51655421 None:intergenic 30.0%
ACAGTGTTCTATTTACTATG+TGG + chr4_4:51655590-51655609 Msa0687000:CDS 30.0%
TTGGATTCTATAACCCTTAT+TGG + chr4_4:51655669-51655688 Msa0687000:CDS 30.0%
GTTATAGAATCCAAAATACC+TGG - chr4_4:51655745-51655764 None:intergenic 30.0%
ATAAACTGTATAAGCTCTTC+AGG - chr4_4:51655923-51655942 None:intergenic 30.0%
CTTCTCAACAAATGCAAAAA+AGG - chr4_4:51656169-51656188 None:intergenic 30.0%
!! TTTTTGCATTTGTTGAGAAG+TGG + chr4_4:51656169-51656188 Msa0687000:CDS 30.0%
GCTGTCACAAAATTATTCTT+TGG - chr4_4:51656210-51656229 None:intergenic 30.0%
CCAACCACATCATTAAAAAA+TGG - chr4_4:51656342-51656361 None:intergenic 30.0%
!!! CCATTTTTTAATGATGTGGT+TGG + chr4_4:51656339-51656358 Msa0687000:CDS 30.0%
CAGCTAATATTGAAATGATG+AGG - chr4_4:51656491-51656510 None:intergenic 30.0%
ATTTCAATATTAGCTGCTGT+TGG + chr4_4:51656495-51656514 Msa0687000:CDS 30.0%
GTTACAAGGACTAATTTCTA+TGG + chr4_4:51656744-51656763 Msa0687000:three_prime_UTR 30.0%
ACTAATTTCTATGGTCTAAG+AGG + chr4_4:51656753-51656772 Msa0687000:three_prime_UTR 30.0%
GTCTTTGCTAAAAGTGAATG+TGG - chr4_4:51653668-51653687 None:intergenic 35.0%
TTCTATAACAGACAGAAGAG+AGG + chr4_4:51653852-51653871 Msa0687000:intron 35.0%
TTTCAGACACTACTTAGAAG+TGG + chr4_4:51653880-51653899 Msa0687000:CDS 35.0%
! TCAGTCTCAGTTTGGATTTT+GGG - chr4_4:51653914-51653933 None:intergenic 35.0%
! TTCAGTCTCAGTTTGGATTT+TGG - chr4_4:51653915-51653934 None:intergenic 35.0%
CATATTATCACTGCTGTGAT+AGG + chr4_4:51654146-51654165 Msa0687000:CDS 35.0%
! AGAAGTGTAAAGATTGACGA+CGG - chr4_4:51654249-51654268 None:intergenic 35.0%
AGAACAGATGACTCTGTTAA+TGG + chr4_4:51654290-51654309 Msa0687000:CDS 35.0%
GATGCAGTAAAGTCTATCTT+AGG + chr4_4:51654335-51654354 Msa0687000:CDS 35.0%
!!! CATTGTTTTTTGGTTTCAGG+AGG + chr4_4:51654427-51654446 Msa0687000:intron 35.0%
AACTCACATCATACTAACTG+AGG - chr4_4:51654527-51654546 None:intergenic 35.0%
CTACTCAAAGTATGCTAGTT+TGG - chr4_4:51654756-51654775 None:intergenic 35.0%
AATGTCTTGCAAATCATCGA+GGG + chr4_4:51654859-51654878 Msa0687000:intron 35.0%
GTTTGAATTATACGCATCTG+CGG - chr4_4:51654893-51654912 None:intergenic 35.0%
ACCTTTGTGCATGTTTCTTA+GGG + chr4_4:51654949-51654968 Msa0687000:intron 35.0%
TGTATCCATTGCTTGACATA+TGG - chr4_4:51655024-51655043 None:intergenic 35.0%
! TTGATCAAAGTCTGGGATTT+GGG - chr4_4:51655080-51655099 None:intergenic 35.0%
ACCATACTTGATCAAAGTCT+GGG - chr4_4:51655087-51655106 None:intergenic 35.0%
ACTTATTCTGCAGTTGGATT+AGG + chr4_4:51655139-51655158 Msa0687000:CDS 35.0%
!!! AAGCATGTTTGTTTTGTTGC+AGG + chr4_4:51655496-51655515 Msa0687000:intron 35.0%
TGAACACAAGACCATGAAAA+AGG + chr4_4:51655541-51655560 Msa0687000:CDS 35.0%
GTGTTCTATTTACTATGTGG+TGG + chr4_4:51655593-51655612 Msa0687000:CDS 35.0%
TATTTACTATGTGGTGGCAT+GGG + chr4_4:51655599-51655618 Msa0687000:CDS 35.0%
AAACCAGTCAAAAGATTTCC+AGG - chr4_4:51655650-51655669 None:intergenic 35.0%
!!! GGAAATCTTTTGACTGGTTT+TGG + chr4_4:51655650-51655669 Msa0687000:CDS 35.0%
CAATGTCAAGAAGCCAATAA+GGG - chr4_4:51655685-51655704 None:intergenic 35.0%
CAATTGTTGTGCACTTAGTT+GGG + chr4_4:51655714-51655733 Msa0687000:CDS 35.0%
AATTGTTGTGCACTTAGTTG+GGG + chr4_4:51655715-51655734 Msa0687000:CDS 35.0%
GAAATACATATTCCCTGCAT+TGG + chr4_4:51656237-51656256 Msa0687000:CDS 35.0%
TCAATTTCTTCCGCTTAGTA+TGG + chr4_4:51656271-51656290 Msa0687000:CDS 35.0%
AATGATGTGGTTGGAATACT+TGG + chr4_4:51656348-51656367 Msa0687000:CDS 35.0%
! TTGGAATACTTGGAGCTTTT+GGG + chr4_4:51656358-51656377 Msa0687000:CDS 35.0%
CACAAAAGAAGATTGGTAGA+TGG + chr4_4:51656424-51656443 Msa0687000:CDS 35.0%
!! TTGGTAGATGGACTAAAAAG+TGG + chr4_4:51656436-51656455 Msa0687000:CDS 35.0%
TAGTCCTTGTAACTTCAAAG+TGG - chr4_4:51656737-51656756 None:intergenic 35.0%
GTACAAGTGAGTGTGATGAA+TGG - chr4_4:51653690-51653709 None:intergenic 40.0%
!! CTAGGAAGTGTTCTACTTCT+TGG - chr4_4:51653738-51653757 None:intergenic 40.0%
CTTCCTAGCAGATTTCAACA+TGG + chr4_4:51653750-51653769 Msa0687000:CDS 40.0%
ACTCCATGTTGAAATCTGCT+AGG - chr4_4:51653756-51653775 None:intergenic 40.0%
! AGACTGATTCAGTCTCAGTT+TGG - chr4_4:51653922-51653941 None:intergenic 40.0%
! TCGAAGCACTTGGAATAGTT+GGG - chr4_4:51653953-51653972 None:intergenic 40.0%
ATGTTGAACCTGTTCTCTTG+AGG - chr4_4:51653988-51654007 None:intergenic 40.0%
AGAATCAACTGGTGTATTGC+AGG + chr4_4:51654101-51654120 Msa0687000:intron 40.0%
! GGTGTATTGCAGGAACATTT+TGG + chr4_4:51654111-51654130 Msa0687000:intron 40.0%
ACTTTGAGTAGTAAGCAGCT+CGG + chr4_4:51654765-51654784 Msa0687000:intron 40.0%
CAATGTCTTGCAAATCATCG+AGG + chr4_4:51654858-51654877 Msa0687000:intron 40.0%
GACCTTTGTGCATGTTTCTT+AGG + chr4_4:51654948-51654967 Msa0687000:intron 40.0%
! CTTGATCAAAGTCTGGGATT+TGG - chr4_4:51655081-51655100 None:intergenic 40.0%
TCCCAGACTTTGATCAAGTA+TGG + chr4_4:51655083-51655102 Msa0687000:CDS 40.0%
CACCATACTTGATCAAAGTC+TGG - chr4_4:51655088-51655107 None:intergenic 40.0%
CAGACTTTGATCAAGTATGG+TGG + chr4_4:51655086-51655105 Msa0687000:CDS 40.0%
TCCTTCACTTATTCTGCAGT+TGG + chr4_4:51655133-51655152 Msa0687000:CDS 40.0%
TCCAACTGCAGAATAAGTGA+AGG - chr4_4:51655137-51655156 None:intergenic 40.0%
TATGCTTGAACCTGCAACTT+TGG - chr4_4:51655176-51655195 None:intergenic 40.0%
AGCTTGATGGGAATTAGCAT+TGG + chr4_4:51655290-51655309 Msa0687000:CDS 40.0%
TCACTGGCACACAGAAAATA+TGG + chr4_4:51655336-51655355 Msa0687000:CDS 40.0%
!! GAGGATAATGGAAAAGGAGT+AGG - chr4_4:51655396-51655415 None:intergenic 40.0%
TTCAGAAGGAGGAGACTTTA+AGG - chr4_4:51655525-51655544 None:intergenic 40.0%
!! TTCATGGTCTTGTGTTCAGA+AGG - chr4_4:51655539-51655558 None:intergenic 40.0%
AACTATGATGCTCACCAAAG+TGG - chr4_4:51655567-51655586 None:intergenic 40.0%
CTATTTACTATGTGGTGGCA+TGG + chr4_4:51655598-51655617 Msa0687000:CDS 40.0%
! GTACCTGGAAATCTTTTGAC+TGG + chr4_4:51655644-51655663 Msa0687000:CDS 40.0%
GCAATGTCAAGAAGCCAATA+AGG - chr4_4:51655686-51655705 None:intergenic 40.0%
GTGCACAACAATTGCAAAGT+TGG - chr4_4:51655708-51655727 None:intergenic 40.0%
GCAATTGTTGTGCACTTAGT+TGG + chr4_4:51655713-51655732 Msa0687000:CDS 40.0%
CTAAGCGGAAGAAATTGAGT+TGG - chr4_4:51656269-51656288 None:intergenic 40.0%
ATTTCTTCCGCTTAGTATGG+AGG + chr4_4:51656274-51656293 Msa0687000:CDS 40.0%
! GTTGGAATACTTGGAGCTTT+TGG + chr4_4:51656357-51656376 Msa0687000:CDS 40.0%
!!! TACTTGGAGCTTTTGGGTTT+TGG + chr4_4:51656364-51656383 Msa0687000:CDS 40.0%
TTTGCACTTCAGATGCTTAG+TGG + chr4_4:51656459-51656478 Msa0687000:CDS 40.0%
!! TGTGCCACTTTGAAGTTACA+AGG + chr4_4:51656730-51656749 Msa0687000:three_prime_UTR 40.0%
CTTGGAATAGTTGGGCTCAA+TGG - chr4_4:51653945-51653964 None:intergenic 45.0%
! GTCGAAGCACTTGGAATAGT+TGG - chr4_4:51653954-51653973 None:intergenic 45.0%
!! TGGAGTGCTTTCATTGGCTT+GGG + chr4_4:51654172-51654191 Msa0687000:CDS 45.0%
GCGAAGAGAATCATGACAAC+AGG - chr4_4:51654227-51654246 None:intergenic 45.0%
CTTTGAGTAGTAAGCAGCTC+GGG + chr4_4:51654766-51654785 Msa0687000:intron 45.0%
GCCCTAAGAAACATGCACAA+AGG - chr4_4:51654953-51654972 None:intergenic 45.0%
CCATTGCTTGACATATGGCA+TGG - chr4_4:51655019-51655038 None:intergenic 45.0%
CCATGCCATATGTCAAGCAA+TGG + chr4_4:51655016-51655035 Msa0687000:CDS 45.0%
GGACATGATAGCTGCAACTA+TGG - chr4_4:51655116-51655135 None:intergenic 45.0%
! TCTGCAGTTGGATTAGGTCT+AGG + chr4_4:51655145-51655164 Msa0687000:CDS 45.0%
!! GATGGGAATTAGCATTGGTG+CGG + chr4_4:51655295-51655314 Msa0687000:CDS 45.0%
CTGGCACACAGAAAATATGG+AGG + chr4_4:51655339-51655358 Msa0687000:CDS 45.0%
TGGAGGAGTTTACAAGCTCT+AGG + chr4_4:51655356-51655375 Msa0687000:CDS 45.0%
GGAGGAGTTTACAAGCTCTA+GGG + chr4_4:51655357-51655376 Msa0687000:CDS 45.0%
! GAGGAGTTTACAAGCTCTAG+GGG + chr4_4:51655358-51655377 Msa0687000:CDS 45.0%
!! TTTACAAGCTCTAGGGGCAA+TGG + chr4_4:51655364-51655383 Msa0687000:CDS 45.0%
!! ATGGTCTTGTGTTCAGAAGG+AGG - chr4_4:51655536-51655555 None:intergenic 45.0%
GACCATGAAAAAGGCCACTT+TGG + chr4_4:51655550-51655569 Msa0687000:CDS 45.0%
!! CACCAAAGTGGCCTTTTTCA+TGG - chr4_4:51655555-51655574 None:intergenic 45.0%
TCCAGGTACATGATCTCCAA+AGG - chr4_4:51655633-51655652 None:intergenic 45.0%
! TTGGGGCATACCAGGTATTT+TGG + chr4_4:51655732-51655751 Msa0687000:intron 45.0%
AGAAGTGGAGTTCACGTAAG+TGG + chr4_4:51656184-51656203 Msa0687000:CDS 45.0%
! AGTTGGTACACACCAATGCA+GGG - chr4_4:51656252-51656271 None:intergenic 45.0%
! AGAGTGTCCTCCATACTAAG+CGG - chr4_4:51656284-51656303 None:intergenic 45.0%
! ATCCATTGCTGGAGTGGTTT+TGG + chr4_4:51656518-51656537 Msa0687000:CDS 45.0%
ATCCAAAACCACTCCAGCAA+TGG - chr4_4:51656523-51656542 None:intergenic 45.0%
ATCACTGCTGTGATAGGCTC+TGG + chr4_4:51654152-51654171 Msa0687000:CDS 50.0%
!! AGGCTCTGGAGTGCTTTCAT+TGG + chr4_4:51654166-51654185 Msa0687000:CDS 50.0%
! CTGGAGTGCTTTCATTGGCT+TGG + chr4_4:51654171-51654190 Msa0687000:CDS 50.0%
GGCAATAGCTCAGCTTGGTT+GGG + chr4_4:51654193-51654212 Msa0687000:CDS 50.0%
! GCCTTTGGAGATCATGTACC+TGG + chr4_4:51655629-51655648 Msa0687000:CDS 50.0%
!! GAGTTGGTACACACCAATGC+AGG - chr4_4:51656253-51656272 None:intergenic 50.0%
TGTTGGATCCATTGCTGGAG+TGG + chr4_4:51656512-51656531 Msa0687000:CDS 50.0%
TCCAAGTGCTTCGACGACGA+TGG + chr4_4:51653959-51653978 Msa0687000:CDS 55.0%
! ACCATCGTCGTCGAAGCACT+TGG - chr4_4:51653963-51653982 None:intergenic 55.0%
GATGGTCGCCTCAAGAGAAC+AGG + chr4_4:51653977-51653996 Msa0687000:CDS 55.0%
GCTTGGGCAATAGCTCAGCT+TGG + chr4_4:51654188-51654207 Msa0687000:CDS 55.0%
GGGCAATAGCTCAGCTTGGT+TGG + chr4_4:51654192-51654211 Msa0687000:CDS 55.0%
! CTAGGCATCGCCAAAGTTGC+AGG + chr4_4:51655163-51655182 Msa0687000:CDS 55.0%
ATTGGTGCGGTGACACAAGC+CGG + chr4_4:51655308-51655327 Msa0687000:CDS 55.0%
ACACAAGCCGGAACAGTCAC+TGG + chr4_4:51655320-51655339 Msa0687000:CDS 55.0%
CTGTGTGCCAGTGACTGTTC+CGG - chr4_4:51655330-51655349 None:intergenic 55.0%
! GGCATGGGTTATGCAGCCTT+TGG + chr4_4:51655614-51655633 Msa0687000:CDS 55.0%
GCACTTAGTTGGGGCATACC+AGG + chr4_4:51655724-51655743 Msa0687000:CDS 55.0%
GCTGCTGTTGGATCCATTGC+TGG + chr4_4:51656507-51656526 Msa0687000:CDS 55.0%
GCTCAGCTTGGTTGGGCTGT+TGG + chr4_4:51654200-51654219 Msa0687000:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 51653647 51656794 51653647 ID=Msa0687000;Name=Msa0687000
chr4_4 mRNA 51653647 51656794 51653647 ID=Msa0687000-mRNA-1;Parent=Msa0687000;Name=Msa0687000-mRNA-1;_AED=0.14;_eAED=0.14;_QI=82|1|1|1|1|1|8|216|512
chr4_4 exon 51653647 51653776 51653647 ID=Msa0687000-mRNA-1:exon:13419;Parent=Msa0687000-mRNA-1
chr4_4 exon 51653863 51653998 51653863 ID=Msa0687000-mRNA-1:exon:13420;Parent=Msa0687000-mRNA-1
chr4_4 exon 51654123 51654356 51654123 ID=Msa0687000-mRNA-1:exon:13421;Parent=Msa0687000-mRNA-1
chr4_4 exon 51654446 51654539 51654446 ID=Msa0687000-mRNA-1:exon:13422;Parent=Msa0687000-mRNA-1
chr4_4 exon 51654970 51655184 51654970 ID=Msa0687000-mRNA-1:exon:13423;Parent=Msa0687000-mRNA-1
chr4_4 exon 51655270 51655427 51655270 ID=Msa0687000-mRNA-1:exon:13424;Parent=Msa0687000-mRNA-1
chr4_4 exon 51655518 51655745 51655518 ID=Msa0687000-mRNA-1:exon:13425;Parent=Msa0687000-mRNA-1
chr4_4 exon 51656153 51656794 51656153 ID=Msa0687000-mRNA-1:exon:13426;Parent=Msa0687000-mRNA-1
chr4_4 five_prime_UTR 51653647 51653728 51653647 ID=Msa0687000-mRNA-1:five_prime_utr;Parent=Msa0687000-mRNA-1
chr4_4 CDS 51653729 51653776 51653729 ID=Msa0687000-mRNA-1:cds;Parent=Msa0687000-mRNA-1
chr4_4 CDS 51653863 51653998 51653863 ID=Msa0687000-mRNA-1:cds;Parent=Msa0687000-mRNA-1
chr4_4 CDS 51654123 51654356 51654123 ID=Msa0687000-mRNA-1:cds;Parent=Msa0687000-mRNA-1
chr4_4 CDS 51654446 51654539 51654446 ID=Msa0687000-mRNA-1:cds;Parent=Msa0687000-mRNA-1
chr4_4 CDS 51654970 51655184 51654970 ID=Msa0687000-mRNA-1:cds;Parent=Msa0687000-mRNA-1
chr4_4 CDS 51655270 51655427 51655270 ID=Msa0687000-mRNA-1:cds;Parent=Msa0687000-mRNA-1
chr4_4 CDS 51655518 51655745 51655518 ID=Msa0687000-mRNA-1:cds;Parent=Msa0687000-mRNA-1
chr4_4 CDS 51656153 51656578 51656153 ID=Msa0687000-mRNA-1:cds;Parent=Msa0687000-mRNA-1
chr4_4 three_prime_UTR 51656579 51656794 51656579 ID=Msa0687000-mRNA-1:three_prime_utr;Parent=Msa0687000-mRNA-1
Gene Sequence

>Msa0687000

ATGTTGCCAAGAAGTAGAACACTTCCTAGCAGATTTCAACATGGAGTTACAGAAGAGAGGTCTGATTTCAGACACTACTTAGAAGTGGAAGCACAGCCCAAAATCCAAACTGAGACTGAATCAGTCTCCATTGAGCCCAACTATTCCAAGTGCTTCGACGACGATGGTCGCCTCAAGAGAACAGGAACATTTTGGACTGCAACTGCTCATATTATCACTGCTGTGATAGGCTCTGGAGTGCTTTCATTGGCTTGGGCAATAGCTCAGCTTGGTTGGGCTGTTGGACCTGTTGTCATGATTCTCTTCGCCGTCGTCAATCTTTACACTTCTAGTCTACTAACACAGTGTTATAGAACAGATGACTCTGTTAATGGACAGAGAAATTACACATACACTGATGCAGTAAAGTCTATCTTAGGAGGAAAAAAGTTCAAAATGTGTGGTTTGATTCAGTATGTGAATCTGTTTGGAATTGCAATTGGATATACTATTGCTGCCTCAGTTAGTATGATGGCAATTAAAAGGTCAAATTGTTATCATGAGAGTCATGGAAAAGATCCATGCCATATGTCAAGCAATGGATACATGATAACATTTGCTATAGCAGAAGTGATACTTTCCCAAATCCCAGACTTTGATCAAGTATGGTGGCTATCCATAGTTGCAGCTATCATGTCCTTCACTTATTCTGCAGTTGGATTAGGTCTAGGCATCGCCAAAGTTGCAGAAAATGGAAAATTTCAAGGAAGCTTGATGGGAATTAGCATTGGTGCGGTGACACAAGCCGGAACAGTCACTGGCACACAGAAAATATGGAGGAGTTTACAAGCTCTAGGGGCAATGGCTTTTTCCTACTCCTTTTCCATTATCCTCATTGAAATTCAAGACACCTTAAAGTCTCCTCCTTCTGAACACAAGACCATGAAAAAGGCCACTTTGGTGAGCATCATAGTTACTACAGTGTTCTATTTACTATGTGGTGGCATGGGTTATGCAGCCTTTGGAGATCATGTACCTGGAAATCTTTTGACTGGTTTTGGATTCTATAACCCTTATTGGCTTCTTGACATTGCCAACTTTGCAATTGTTGTGCACTTAGTTGGGGCATACCAGGTGTTTTCTCAACCCTTTTTTGCATTTGTTGAGAAGTGGAGTTCACGTAAGTGGCCAAAGAATAATTTTGTGACAGCAGAACATGAAATACATATTCCCTGCATTGGTGTGTACCAACTCAATTTCTTCCGCTTAGTATGGAGGACACTCTTTGTGCTATTGACAACAATCATAGCCATGCTATTACCATTTTTTAATGATGTGGTTGGAATACTTGGAGCTTTTGGGTTTTGGCCTTTAACAGTTTATTACCCAATAGACATGTATATTTCACAAAAGAAGATTGGTAGATGGACTAAAAAGTGGTTTGCACTTCAGATGCTTAGTGGATGTTGCCTCATCATTTCAATATTAGCTGCTGTTGGATCCATTGCTGGAGTGGTTTTGGATCTCAAAACTTACAAGCCATTCAAAACTAGTTATTAA
Protein sequence

>Msa0687000

MLPRSRTLPSRFQHGVTEERSDFRHYLEVEAQPKIQTETESVSIEPNYSKCFDDDGRLKRTGTFWTATAHIITAVIGSGVLSLAWAIAQLGWAVGPVVMILFAVVNLYTSSLLTQCYRTDDSVNGQRNYTYTDAVKSILGGKKFKMCGLIQYVNLFGIAIGYTIAASVSMMAIKRSNCYHESHGKDPCHMSSNGYMITFAIAEVILSQIPDFDQVWWLSIVAAIMSFTYSAVGLGLGIAKVAENGKFQGSLMGISIGAVTQAGTVTGTQKIWRSLQALGAMAFSYSFSIILIEIQDTLKSPPSEHKTMKKATLVSIIVTTVFYLLCGGMGYAAFGDHVPGNLLTGFGFYNPYWLLDIANFAIVVHLVGAYQVFSQPFFAFVEKWSSRKWPKNNFVTAEHEIHIPCIGVYQLNFFRLVWRTLFVLLTTIIAMLLPFFNDVVGILGAFGFWPLTVYYPIDMYISQKKIGRWTKKWFALQMLSGCCLIISILAAVGSIAGVVLDLKTYKPFKTSY*