Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305740 | XP_013456461.1 | 97.070 | 512 | 11 | 1 | 1 | 508 | 1 | 512 | 0.0 | 1024 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305740 | sp|Q38967|AAP2_ARATH | 70.362 | 469 | 127 | 4 | 45 | 508 | 32 | 493 | 0.0 | 707 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305740 | A0A072ULC2 | 97.070 | 512 | 11 | 1 | 1 | 508 | 1 | 512 | 0.0 | 1024 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0049400 | Msa1305740 | -0.802646 | 5.083058e-49 | -8.615850e-47 |
| Msa0053110 | Msa1305740 | 0.800500 | 1.399717e-48 | -8.615850e-47 |
| Msa0053900 | Msa1305740 | 0.816627 | 5.016162e-52 | -8.615850e-47 |
| Msa0079770 | Msa1305740 | 0.828104 | 1.081916e-54 | -8.615850e-47 |
| Msa0614230 | Msa1305740 | 0.808013 | 3.816003e-50 | -8.615850e-47 |
| Msa0617830 | Msa1305740 | 0.809240 | 2.086919e-50 | -8.615850e-47 |
| Msa0665910 | Msa1305740 | -0.808859 | 2.517412e-50 | -8.615850e-47 |
| Msa0673010 | Msa1305740 | -0.806645 | 7.437210e-50 | -8.615850e-47 |
| Msa0687000 | Msa1305740 | 0.994718 | 1.335435e-209 | -8.615850e-47 |
| Msa0738850 | Msa1305740 | 0.823230 | 1.549473e-53 | -8.615850e-47 |
| Msa0738860 | Msa1305740 | 0.826727 | 2.314018e-54 | -8.615850e-47 |
| Msa0738870 | Msa1305740 | 0.823262 | 1.522429e-53 | -8.615850e-47 |
| Msa0787750 | Msa1305740 | 0.802888 | 4.530328e-49 | -8.615850e-47 |
| Msa0792790 | Msa1305740 | -0.804700 | 1.904767e-49 | -8.615850e-47 |
| Msa0819330 | Msa1305740 | 0.800460 | 1.426465e-48 | -8.615850e-47 |
| Msa0819340 | Msa1305740 | 0.812789 | 3.552060e-51 | -8.615850e-47 |
| Msa0819360 | Msa1305740 | 0.807454 | 5.014258e-50 | -8.615850e-47 |
| Msa0835730 | Msa1305740 | 0.802546 | 5.329844e-49 | -8.615850e-47 |
| Msa0127440 | Msa1305740 | 0.827128 | 1.856012e-54 | -8.615850e-47 |
| Msa0143080 | Msa1305740 | 0.810853 | 9.375930e-51 | -8.615850e-47 |
| Msa0148360 | Msa1305740 | 0.817147 | 3.834310e-52 | -8.615850e-47 |
| Msa0168640 | Msa1305740 | -0.805394 | 1.363291e-49 | -8.615850e-47 |
| Msa0182930 | Msa1305740 | 0.802381 | 5.763740e-49 | -8.615850e-47 |
| Msa0185480 | Msa1305740 | 0.814324 | 1.632338e-51 | -8.615850e-47 |
| Msa0194280 | Msa1305740 | 0.813654 | 2.293858e-51 | -8.615850e-47 |
| Msa0196130 | Msa1305740 | -0.856403 | 3.293682e-62 | -8.615850e-47 |
| Msa0235980 | Msa1305740 | 0.812164 | 4.866129e-51 | -8.615850e-47 |
| Msa0238070 | Msa1305740 | -0.836285 | 1.023473e-56 | -8.615850e-47 |
| Msa1241820 | Msa1305740 | 0.824885 | 6.335199e-54 | -8.615850e-47 |
| Msa1263660 | Msa1305740 | 0.800789 | 1.222026e-48 | -8.615850e-47 |
| Msa1282920 | Msa1305740 | 0.857277 | 1.821043e-62 | -8.615850e-47 |
| Msa1303720 | Msa1305740 | 0.805693 | 1.180028e-49 | -8.615850e-47 |
| Msa1305740 | Msa1305750 | 0.833422 | 5.381917e-56 | -8.615850e-47 |
| Msa1305740 | Msa1309540 | 0.803267 | 3.781477e-49 | -8.615850e-47 |
| Msa1305740 | Msa1342930 | 0.915827 | 3.703551e-85 | -8.615850e-47 |
| Msa1305740 | Msa1343820 | 0.828225 | 1.011665e-54 | -8.615850e-47 |
| Msa1305740 | Msa1368210 | 0.806182 | 9.315182e-50 | -8.615850e-47 |
| Msa1305740 | Msa1382720 | 0.860790 | 1.616077e-63 | -8.615850e-47 |
| Msa1305740 | Msa1423450 | 0.822267 | 2.595982e-53 | -8.615850e-47 |
| Msa1305740 | Msa1425010 | 0.824559 | 7.557985e-54 | -8.615850e-47 |
| Msa1305740 | Msa1442290 | 0.822935 | 1.815431e-53 | -8.615850e-47 |
| Msa1305740 | Msa1450020 | 0.820317 | 7.312020e-53 | -8.615850e-47 |
| Msa0375080 | Msa1305740 | -0.837897 | 3.963442e-57 | -8.615850e-47 |
| Msa0378340 | Msa1305740 | 0.843791 | 1.127639e-58 | -8.615850e-47 |
| Msa0419620 | Msa1305740 | -0.806700 | 7.243284e-50 | -8.615850e-47 |
| Msa0419640 | Msa1305740 | -0.804991 | 1.655706e-49 | -8.615850e-47 |
| Msa0427520 | Msa1305740 | -0.807286 | 5.443586e-50 | -8.615850e-47 |
| Msa0427690 | Msa1305740 | 0.845538 | 3.815832e-59 | -8.615850e-47 |
| Msa0429070 | Msa1305740 | -0.814161 | 1.773485e-51 | -8.615850e-47 |
| Msa0446080 | Msa1305740 | 0.833647 | 4.730014e-56 | -8.615850e-47 |
| Msa0446090 | Msa1305740 | 0.846406 | 2.216601e-59 | -8.615850e-47 |
| Msa0981010 | Msa1305740 | 0.808544 | 2.939276e-50 | -8.615850e-47 |
| Msa0996080 | Msa1305740 | 0.829640 | 4.597669e-55 | -8.615850e-47 |
| Msa0996090 | Msa1305740 | 0.813037 | 3.134347e-51 | -8.615850e-47 |
| Msa1007610 | Msa1305740 | -0.802201 | 6.277322e-49 | -8.615850e-47 |
| Msa1014270 | Msa1305740 | 0.806831 | 6.794547e-50 | -8.615850e-47 |
| Msa1055260 | Msa1305740 | 0.807256 | 5.524759e-50 | -8.615850e-47 |
| Msa1055280 | Msa1305740 | 0.808660 | 2.777214e-50 | -8.615850e-47 |
| Msa0282170 | Msa1305740 | 0.818810 | 1.614330e-52 | -8.615850e-47 |
| Msa0309650 | Msa1305740 | -0.819888 | 9.165002e-53 | -8.615850e-47 |
| Msa0312990 | Msa1305740 | 0.801928 | 7.143290e-49 | -8.615850e-47 |
| Msa0314480 | Msa1305740 | 0.814430 | 1.546680e-51 | -8.615850e-47 |
| Msa0352040 | Msa1305740 | 0.803043 | 4.208123e-49 | -8.615850e-47 |
| Msa1116140 | Msa1305740 | 0.833850 | 4.206994e-56 | -8.615850e-47 |
| Msa1116150 | Msa1305740 | 0.836621 | 8.406475e-57 | -8.615850e-47 |
| Msa1133710 | Msa1305740 | 0.811691 | 6.167012e-51 | -8.615850e-47 |
| Msa1162560 | Msa1305740 | 0.833122 | 6.393149e-56 | -8.615850e-47 |
| Msa1178160 | Msa1305740 | 0.801872 | 7.335986e-49 | -8.615850e-47 |
| Msa1187520 | Msa1305740 | 0.836283 | 1.024460e-56 | -8.615850e-47 |
| Msa1217810 | Msa1305740 | 0.831708 | 1.431963e-55 | -8.615850e-47 |
| Msa0511720 | Msa1305740 | -0.820705 | 5.956643e-53 | -8.615850e-47 |
| Msa0518520 | Msa1305740 | 0.844758 | 6.201466e-59 | -8.615850e-47 |
| Msa0535450 | Msa1305740 | 0.803994 | 2.672249e-49 | -8.615850e-47 |
| Msa0538270 | Msa1305740 | 0.804010 | 2.652093e-49 | -8.615850e-47 |
| Msa0538570 | Msa1305740 | 0.810857 | 9.358304e-51 | -8.615850e-47 |
| Msa0551950 | Msa1305740 | 0.914520 | 1.740027e-84 | -8.615850e-47 |
| Msa0561510 | Msa1305740 | 0.809420 | 1.908692e-50 | -8.615850e-47 |
| Msa0576600 | Msa1305740 | 0.806417 | 8.308935e-50 | -8.615850e-47 |
| Msa0598570 | Msa1305740 | 0.815245 | 1.020421e-51 | -8.615850e-47 |
| Msa0599740 | Msa1305740 | 0.805424 | 1.344205e-49 | -8.615850e-47 |
| Msa0859520 | Msa1305740 | 0.812348 | 4.436023e-51 | -8.615850e-47 |
| Msa0859530 | Msa1305740 | 0.811294 | 7.524860e-51 | -8.615850e-47 |
| Msa0861040 | Msa1305740 | -0.809209 | 2.118869e-50 | -8.615850e-47 |
| Msa0866790 | Msa1305740 | 0.850032 | 2.206947e-60 | -8.615850e-47 |
| Msa0877420 | Msa1305740 | 0.834338 | 3.175996e-56 | -8.615850e-47 |
| Msa0878980 | Msa1305740 | -0.820247 | 7.587981e-53 | -8.615850e-47 |
| Msa0896210 | Msa1305740 | 0.828826 | 7.244218e-55 | -8.615850e-47 |
| Msa0896220 | Msa1305740 | 0.820632 | 6.191307e-53 | -8.615850e-47 |
| Msa0922540 | Msa1305740 | 0.835804 | 1.355553e-56 | -8.615850e-47 |
| Msa0931480 | Msa1305740 | 0.804557 | 2.039832e-49 | -8.615850e-47 |
| Msa0937550 | Msa1305740 | 0.809199 | 2.129407e-50 | -8.615850e-47 |
| Msa0942730 | Msa1305740 | 0.809690 | 1.670598e-50 | -8.615850e-47 |
| Msa0944770 | Msa1305740 | 0.817843 | 2.671829e-52 | -8.615850e-47 |
| Msa0955300 | Msa1305740 | 0.831581 | 1.539351e-55 | -8.615850e-47 |
| Msa0955310 | Msa1305740 | 0.805938 | 1.048048e-49 | -8.615850e-47 |
| Msa0979550 | Msa1305740 | 0.828217 | 1.016664e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305740 | MtrunA17_Chr4g0037201 | 97.070 | 512 | 11 | 1 | 1 | 508 | 1 | 512 | 0.0 | 1024 |
| Msa1305740 | MtrunA17_Chr8g0384661 | 65.849 | 489 | 152 | 5 | 24 | 508 | 17 | 494 | 0.0 | 668 |
| Msa1305740 | MtrunA17_Chr1g0159761 | 66.109 | 478 | 151 | 3 | 36 | 508 | 4 | 475 | 0.0 | 657 |
| Msa1305740 | MtrunA17_Chr3g0125081 | 63.958 | 480 | 160 | 3 | 34 | 508 | 8 | 479 | 0.0 | 655 |
| Msa1305740 | MtrunA17_Chr3g0125091 | 63.732 | 477 | 159 | 4 | 38 | 508 | 12 | 480 | 0.0 | 646 |
| Msa1305740 | MtrunA17_Chr3g0125101 | 63.103 | 477 | 162 | 4 | 38 | 508 | 12 | 480 | 0.0 | 638 |
| Msa1305740 | MtrunA17_Chr3g0130651 | 63.368 | 475 | 158 | 5 | 34 | 504 | 2 | 464 | 0.0 | 595 |
| Msa1305740 | MtrunA17_Chr3g0130641 | 59.701 | 469 | 173 | 4 | 44 | 508 | 21 | 477 | 0.0 | 588 |
| Msa1305740 | MtrunA17_Chr3g0140761 | 57.143 | 462 | 188 | 3 | 49 | 505 | 23 | 479 | 0.0 | 568 |
| Msa1305740 | MtrunA17_Chr1g0146491 | 56.494 | 462 | 191 | 3 | 49 | 505 | 13 | 469 | 0.0 | 564 |
| Msa1305740 | MtrunA17_Chr1g0206871 | 50.756 | 463 | 209 | 4 | 58 | 507 | 14 | 470 | 0.0 | 518 |
| Msa1305740 | MtrunA17_Chr3g0103231 | 49.446 | 451 | 216 | 2 | 49 | 495 | 13 | 455 | 1.85e-172 | 494 |
| Msa1305740 | MtrunA17_Chr3g0103221 | 50.000 | 446 | 211 | 2 | 56 | 497 | 27 | 464 | 2.46e-169 | 486 |
| Msa1305740 | MtrunA17_Chr3g0103211 | 48.305 | 472 | 222 | 5 | 29 | 495 | 1 | 455 | 6.45e-169 | 485 |
| Msa1305740 | MtrunA17_Chr5g0447221 | 45.992 | 474 | 230 | 5 | 29 | 495 | 7 | 461 | 3.54e-160 | 463 |
| Msa1305740 | MtrunA17_Chr3g0140531 | 48.401 | 469 | 232 | 3 | 40 | 504 | 5 | 467 | 5.69e-160 | 462 |
| Msa1305740 | MtrunA17_Chr3g0103271 | 49.777 | 448 | 212 | 3 | 53 | 495 | 21 | 460 | 1.15e-155 | 451 |
| Msa1305740 | MtrunA17_Chr1g0146411 | 47.292 | 480 | 235 | 6 | 30 | 505 | 5 | 470 | 6.03e-154 | 447 |
| Msa1305740 | MtrunA17_Chr3g0140541 | 47.134 | 471 | 235 | 4 | 38 | 504 | 6 | 466 | 8.02e-146 | 426 |
| Msa1305740 | MtrunA17_Chr1g0206851 | 51.630 | 368 | 166 | 3 | 139 | 505 | 22 | 378 | 4.75e-144 | 418 |
| Msa1305740 | MtrunA17_Chr2g0293331 | 45.295 | 457 | 238 | 4 | 52 | 504 | 5 | 453 | 2.31e-142 | 417 |
| Msa1305740 | MtrunA17_Chr1g0146331 | 44.420 | 457 | 241 | 5 | 53 | 504 | 14 | 462 | 5.66e-142 | 416 |
| Msa1305740 | MtrunA17_Chr1g0146391 | 43.764 | 457 | 245 | 4 | 53 | 505 | 6 | 454 | 1.01e-140 | 413 |
| Msa1305740 | MtrunA17_Chr5g0447231 | 44.719 | 445 | 233 | 3 | 58 | 497 | 24 | 460 | 1.28e-137 | 405 |
| Msa1305740 | MtrunA17_Chr1g0206831 | 49.708 | 342 | 160 | 3 | 160 | 500 | 6 | 336 | 6.66e-128 | 376 |
| Msa1305740 | MtrunA17_Chr3g0103251 | 46.240 | 359 | 156 | 2 | 168 | 497 | 20 | 370 | 2.55e-120 | 358 |
| Msa1305740 | MtrunA17_Chr5g0402151 | 60.465 | 301 | 76 | 5 | 62 | 358 | 3 | 264 | 1.55e-117 | 347 |
| Msa1305740 | MtrunA17_Chr3g0130671 | 61.435 | 223 | 82 | 1 | 49 | 267 | 29 | 251 | 4.41e-93 | 285 |
| Msa1305740 | MtrunA17_Chr1g0206821 | 57.466 | 221 | 94 | 0 | 287 | 507 | 310 | 530 | 9.32e-93 | 292 |
| Msa1305740 | MtrunA17_Chr1g0206821 | 52.653 | 245 | 106 | 3 | 52 | 291 | 15 | 254 | 2.10e-81 | 263 |
| Msa1305740 | MtrunA17_Chr3g0130661 | 59.016 | 183 | 72 | 1 | 325 | 507 | 1 | 180 | 6.29e-77 | 239 |
| Msa1305740 | MtrunA17_Chr6g0458931 | 29.328 | 491 | 278 | 15 | 38 | 502 | 5 | 452 | 3.37e-51 | 181 |
| Msa1305740 | MtrunA17_Chr2g0331721 | 28.340 | 494 | 306 | 11 | 17 | 501 | 3 | 457 | 7.22e-47 | 169 |
| Msa1305740 | MtrunA17_Chr8g0376991 | 28.194 | 454 | 279 | 10 | 59 | 505 | 23 | 436 | 4.18e-45 | 164 |
| Msa1305740 | MtrunA17_Chr6g0458921 | 31.209 | 455 | 257 | 14 | 60 | 502 | 15 | 425 | 2.85e-44 | 161 |
| Msa1305740 | MtrunA17_Chr4g0057851 | 28.859 | 447 | 257 | 14 | 70 | 502 | 21 | 420 | 4.20e-44 | 160 |
| Msa1305740 | MtrunA17_Chr6g0459031 | 30.769 | 455 | 259 | 14 | 60 | 502 | 15 | 425 | 9.46e-44 | 160 |
| Msa1305740 | MtrunA17_Chr2g0328081 | 29.167 | 480 | 269 | 15 | 38 | 502 | 2 | 425 | 9.50e-39 | 146 |
| Msa1305740 | MtrunA17_Chr7g0230011 | 28.009 | 457 | 268 | 12 | 60 | 502 | 31 | 440 | 7.44e-37 | 141 |
| Msa1305740 | MtrunA17_Chr6g0459001 | 28.721 | 477 | 282 | 13 | 59 | 502 | 22 | 473 | 7.50e-37 | 142 |
| Msa1305740 | MtrunA17_Chr5g0422741 | 28.632 | 475 | 277 | 16 | 40 | 502 | 12 | 436 | 9.12e-37 | 141 |
| Msa1305740 | MtrunA17_Chr1g0184721 | 26.875 | 480 | 292 | 16 | 36 | 504 | 6 | 437 | 1.01e-36 | 140 |
| Msa1305740 | MtrunA17_Chr6g0459011 | 28.111 | 434 | 263 | 9 | 75 | 500 | 1 | 393 | 1.55e-36 | 139 |
| Msa1305740 | MtrunA17_Chr6g0459021 | 26.518 | 494 | 295 | 14 | 26 | 502 | 2 | 444 | 2.14e-36 | 140 |
| Msa1305740 | MtrunA17_Chr3g0122921 | 26.477 | 491 | 268 | 17 | 38 | 504 | 6 | 427 | 5.30e-35 | 135 |
| Msa1305740 | MtrunA17_Chr3g0077651 | 28.160 | 451 | 279 | 9 | 60 | 502 | 53 | 466 | 5.44e-34 | 134 |
| Msa1305740 | MtrunA17_Chr3g0103261 | 47.368 | 133 | 65 | 2 | 49 | 177 | 13 | 144 | 2.48e-33 | 124 |
| Msa1305740 | MtrunA17_Chr1g0198531 | 26.403 | 481 | 289 | 14 | 33 | 502 | 8 | 434 | 8.86e-33 | 129 |
| Msa1305740 | MtrunA17_Chr1g0198541 | 27.039 | 466 | 279 | 15 | 50 | 502 | 17 | 434 | 1.11e-32 | 129 |
| Msa1305740 | MtrunA17_Chr1g0206841 | 58.163 | 98 | 38 | 1 | 40 | 137 | 5 | 99 | 3.22e-31 | 116 |
| Msa1305740 | MtrunA17_Chr3g0143701 | 24.554 | 448 | 293 | 13 | 60 | 495 | 85 | 499 | 3.82e-30 | 123 |
| Msa1305740 | MtrunA17_Chr1g0206861 | 61.798 | 89 | 34 | 0 | 48 | 136 | 10 | 98 | 3.89e-30 | 115 |
| Msa1305740 | MtrunA17_Chr4g0027241 | 24.949 | 489 | 304 | 18 | 36 | 504 | 14 | 459 | 3.89e-26 | 111 |
| Msa1305740 | MtrunA17_Chr1g0146351 | 52.941 | 102 | 43 | 2 | 70 | 167 | 14 | 114 | 2.76e-25 | 100 |
| Msa1305740 | MtrunA17_Chr1g0198081 | 24.892 | 462 | 297 | 14 | 58 | 507 | 58 | 481 | 2.14e-24 | 106 |
| Msa1305740 | MtrunA17_Chr8g0387941 | 23.529 | 476 | 300 | 16 | 53 | 507 | 18 | 450 | 1.34e-23 | 103 |
| Msa1305740 | MtrunA17_Chr4g0038711 | 24.086 | 465 | 298 | 14 | 60 | 503 | 71 | 501 | 6.40e-23 | 102 |
| Msa1305740 | MtrunA17_Chr5g0406351 | 25.055 | 455 | 287 | 18 | 59 | 497 | 107 | 523 | 1.53e-22 | 100 |
| Msa1305740 | MtrunA17_Chr5g0436281 | 25.408 | 429 | 254 | 15 | 90 | 504 | 4 | 380 | 1.54e-20 | 93.6 |
| Msa1305740 | MtrunA17_Chr5g0406331 | 23.541 | 497 | 307 | 18 | 9 | 469 | 15 | 474 | 7.03e-20 | 92.8 |
| Msa1305740 | MtrunA17_Chr1g0159751 | 69.231 | 52 | 16 | 0 | 304 | 355 | 1 | 52 | 1.44e-17 | 77.4 |
| Msa1305740 | MtrunA17_Chr3g0112971 | 25.728 | 412 | 244 | 16 | 105 | 504 | 72 | 433 | 2.26e-14 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305740 | AT5G09220.1 | 70.362 | 469 | 127 | 4 | 45 | 508 | 32 | 493 | 0.0 | 707 |
| Msa1305740 | AT5G63850.1 | 69.828 | 464 | 129 | 3 | 50 | 508 | 9 | 466 | 0.0 | 686 |
| Msa1305740 | AT1G77380.1 | 67.672 | 464 | 140 | 2 | 49 | 508 | 19 | 476 | 0.0 | 654 |
| Msa1305740 | AT1G44100.1 | 62.605 | 476 | 173 | 2 | 38 | 508 | 5 | 480 | 0.0 | 642 |
| Msa1305740 | AT1G10010.1 | 55.531 | 461 | 196 | 2 | 50 | 506 | 18 | 473 | 0.0 | 557 |
| Msa1305740 | AT1G10010.2 | 55.531 | 461 | 196 | 2 | 50 | 506 | 19 | 474 | 0.0 | 557 |
| Msa1305740 | AT5G49630.1 | 55.269 | 465 | 197 | 4 | 47 | 505 | 20 | 479 | 0.0 | 543 |
| Msa1305740 | AT1G58360.1 | 50.826 | 484 | 229 | 2 | 27 | 506 | 4 | 482 | 0.0 | 539 |
| Msa1305740 | AT5G23810.1 | 48.195 | 471 | 225 | 6 | 34 | 495 | 2 | 462 | 2.19e-144 | 423 |
| Msa1305740 | AT5G23810.2 | 49.856 | 347 | 157 | 5 | 34 | 373 | 2 | 338 | 2.32e-106 | 322 |
| Msa1305740 | AT5G23810.4 | 46.038 | 265 | 126 | 5 | 34 | 291 | 2 | 256 | 1.68e-68 | 221 |
| Msa1305740 | AT5G23810.5 | 45.972 | 211 | 105 | 4 | 34 | 237 | 2 | 210 | 6.70e-54 | 181 |
| Msa1305740 | AT5G23810.3 | 45.972 | 211 | 105 | 4 | 34 | 237 | 2 | 210 | 6.70e-54 | 181 |
| Msa1305740 | AT1G24400.1 | 27.983 | 461 | 267 | 10 | 60 | 504 | 29 | 440 | 1.80e-45 | 165 |
| Msa1305740 | AT5G40780.1 | 27.193 | 456 | 273 | 10 | 60 | 502 | 34 | 443 | 1.01e-43 | 160 |
| Msa1305740 | AT1G48640.1 | 26.844 | 488 | 296 | 11 | 33 | 505 | 12 | 453 | 3.59e-43 | 159 |
| Msa1305740 | AT3G01760.1 | 28.698 | 453 | 267 | 13 | 60 | 499 | 32 | 441 | 9.75e-40 | 150 |
| Msa1305740 | AT5G40780.3 | 26.984 | 441 | 263 | 10 | 75 | 502 | 1 | 395 | 1.49e-39 | 148 |
| Msa1305740 | AT5G40780.2 | 26.984 | 441 | 263 | 10 | 75 | 502 | 1 | 395 | 1.49e-39 | 148 |
| Msa1305740 | AT1G67640.1 | 27.948 | 458 | 271 | 12 | 60 | 504 | 29 | 440 | 4.46e-38 | 145 |
| Msa1305740 | AT1G61270.1 | 27.412 | 456 | 268 | 12 | 60 | 499 | 34 | 442 | 3.18e-37 | 143 |
| Msa1305740 | AT1G71680.1 | 26.392 | 485 | 293 | 11 | 38 | 504 | 9 | 447 | 8.02e-37 | 142 |
| Msa1305740 | AT1G25530.1 | 29.295 | 454 | 268 | 13 | 59 | 502 | 27 | 437 | 1.89e-32 | 129 |
| Msa1305740 | AT1G71680.2 | 27.701 | 361 | 214 | 10 | 38 | 380 | 9 | 340 | 9.86e-32 | 125 |
| Msa1305740 | AT1G08230.2 | 26.882 | 465 | 280 | 16 | 58 | 504 | 26 | 448 | 1.47e-25 | 109 |
| Msa1305740 | AT5G41800.1 | 23.950 | 476 | 285 | 17 | 58 | 507 | 25 | 449 | 2.64e-21 | 97.1 |
| Msa1305740 | AT2G36590.1 | 24.494 | 445 | 269 | 18 | 29 | 461 | 1 | 390 | 2.72e-18 | 87.8 |
| Msa1305740 | AT1G08230.4 | 31.349 | 252 | 136 | 10 | 266 | 504 | 102 | 329 | 1.53e-17 | 84.3 |
| Msa1305740 | AT1G08230.6 | 31.349 | 252 | 136 | 10 | 266 | 504 | 102 | 329 | 1.53e-17 | 84.3 |
| Msa1305740 | AT1G08230.5 | 31.349 | 252 | 136 | 10 | 266 | 504 | 102 | 329 | 1.53e-17 | 84.3 |
| Msa1305740 | AT1G08230.3 | 31.349 | 252 | 136 | 10 | 266 | 504 | 121 | 348 | 2.62e-17 | 84.0 |
| Msa1305740 | AT2G39890.2 | 23.841 | 453 | 283 | 18 | 65 | 504 | 36 | 439 | 7.89e-17 | 83.2 |
| Msa1305740 | AT2G39890.1 | 23.841 | 453 | 283 | 18 | 65 | 504 | 36 | 439 | 7.89e-17 | 83.2 |
| Msa1305740 | AT2G39890.3 | 23.474 | 426 | 266 | 16 | 90 | 504 | 4 | 380 | 1.91e-16 | 81.6 |
| Msa1305740 | AT3G55740.1 | 24.593 | 492 | 294 | 23 | 30 | 504 | 5 | 436 | 4.49e-16 | 80.9 |
| Msa1305740 | AT3G55740.2 | 25.175 | 429 | 255 | 19 | 90 | 504 | 4 | 380 | 1.22e-15 | 79.3 |
| Msa1305740 | AT3G55740.3 | 25.175 | 429 | 255 | 19 | 90 | 504 | 4 | 380 | 1.22e-15 | 79.3 |
| Msa1305740 | AT4G35180.1 | 23.291 | 468 | 296 | 12 | 32 | 478 | 24 | 449 | 1.60e-14 | 76.3 |
| Msa1305740 | AT1G47670.1 | 23.593 | 462 | 299 | 16 | 59 | 503 | 93 | 517 | 3.74e-13 | 72.0 |
| Msa1305740 | AT4G35180.2 | 24.684 | 316 | 204 | 7 | 32 | 334 | 24 | 318 | 4.92e-11 | 64.7 |
Find 116 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGTCTCAGTTTGGATTT+TGG | 0.149290 | 8_3:+69306349 | None:intergenic |
| TTGAATTTCAATGAGGATAA+TGG | 0.220587 | 8_3:+69304857 | None:intergenic |
| TTCAGAAGGAGGAGACTTTA+AGG | 0.234915 | 8_3:+69304740 | None:intergenic |
| CTGGAGTGCTTTCATTGGCT+TGG | 0.244355 | 8_3:-69306090 | Msa1305740:CDS |
| TTGGATTCTATAACCCTTAT+TGG | 0.244673 | 8_3:-69304593 | Msa1305740:CDS |
| ATCCATTGCTGGAGTGGTTT+TGG | 0.246912 | 8_3:-69303744 | Msa1305740:CDS |
| GTTGGAATACTTGGAGCTTT+TGG | 0.258162 | 8_3:-69303905 | Msa1305740:CDS |
| GGACATGATAGCTGCAACTA+TGG | 0.263574 | 8_3:+69305149 | None:intergenic |
| CTAGGAAGTGTTCTACTTCT+TGG | 0.264874 | 8_3:+69306526 | None:intergenic |
| GCTGTCACAAAATTATTCTT+TGG | 0.273989 | 8_3:+69304055 | None:intergenic |
| ATTGGGTAATAAACTGTTAA+AGG | 0.276366 | 8_3:+69303875 | None:intergenic |
| TCAATTTCTTCCGCTTAGTA+TGG | 0.277518 | 8_3:-69303991 | Msa1305740:CDS |
| ACTTATTCTGCAGTTGGATT+AGG | 0.281638 | 8_3:-69305123 | Msa1305740:CDS |
| TGTGAAATATACATGTCTAT+TGG | 0.291402 | 8_3:+69303857 | None:intergenic |
| GTGAAATATACATGTCTATT+GGG | 0.296365 | 8_3:+69303858 | None:intergenic |
| TTGATCAAAGTCTGGGATTT+GGG | 0.299517 | 8_3:+69305185 | None:intergenic |
| AGAACAGATGACTCTGTTAA+TGG | 0.303497 | 8_3:-69305971 | Msa1305740:CDS |
| CTTGATCAAAGTCTGGGATT+TGG | 0.326018 | 8_3:+69305184 | None:intergenic |
| TGTTTCTTAGGGCAATTAAA+AGG | 0.327651 | 8_3:-69305302 | Msa1305740:intron |
| TGGAGTGCTTTCATTGGCTT+GGG | 0.340533 | 8_3:-69306089 | Msa1305740:CDS |
| GCAATGTCAAGAAGCCAATA+AGG | 0.342161 | 8_3:+69304579 | None:intergenic |
| GCAATTGTTGTGCACTTAGT+TGG | 0.345019 | 8_3:-69304549 | Msa1305740:CDS |
| GGTGTATTGCAGGAACATTT+TGG | 0.352855 | 8_3:-69306150 | Msa1305740:intron |
| TGAACACAAGACCATGAAAA+AGG | 0.355176 | 8_3:-69304721 | Msa1305740:CDS |
| GTTACAAGGACTAATTTCTA+TGG | 0.355249 | 8_3:-69303518 | Msa1305740:three_prime_UTR |
| TCACTGGCACACAGAAAATA+TGG | 0.358100 | 8_3:-69304926 | Msa1305740:CDS |
| CAATTGTTGTGCACTTAGTT+GGG | 0.358372 | 8_3:-69304548 | Msa1305740:CDS |
| CATATTATCACTGCTGTGAT+AGG | 0.360414 | 8_3:-69306115 | Msa1305740:CDS |
| CTGTGTGCCAGTGACTGTTC+CGG | 0.370439 | 8_3:+69304935 | None:intergenic |
| TATGCTTGAACCTGCAACTT+TGG | 0.370453 | 8_3:+69305089 | None:intergenic |
| GGCAATAGCTCAGCTTGGTT+GGG | 0.371439 | 8_3:-69306068 | Msa1305740:CDS |
| TCCCAGACTTTGATCAAGTA+TGG | 0.373754 | 8_3:-69305179 | Msa1305740:CDS |
| GGGCAATAGCTCAGCTTGGT+TGG | 0.375371 | 8_3:-69306069 | Msa1305740:CDS |
| GCTGCTGTTGGATCCATTGC+TGG | 0.376547 | 8_3:-69303755 | Msa1305740:CDS |
| AATGATGTGGTTGGAATACT+TGG | 0.378175 | 8_3:-69303914 | Msa1305740:CDS |
| CACCATACTTGATCAAAGTC+TGG | 0.378867 | 8_3:+69305177 | None:intergenic |
| CTAGGCATCGCCAAAGTTGC+AGG | 0.384071 | 8_3:-69305099 | Msa1305740:intron |
| AGGCTCTGGAGTGCTTTCAT+TGG | 0.387217 | 8_3:-69306095 | Msa1305740:CDS |
| GTCGAAGCACTTGGAATAGT+TGG | 0.391776 | 8_3:+69306310 | None:intergenic |
| TCCTTCACTTATTCTGCAGT+TGG | 0.394941 | 8_3:-69305129 | Msa1305740:CDS |
| ATTCAGTATGTGAATCTGTT+TGG | 0.402010 | 8_3:-69305787 | Msa1305740:CDS |
| AGACTGATTCAGTCTCAGTT+TGG | 0.403667 | 8_3:+69306342 | None:intergenic |
| AAACCAGTCAAAAGATTTCC+AGG | 0.403962 | 8_3:+69304615 | None:intergenic |
| GCTCAGCTTGGTTGGGCTGT+TGG | 0.410253 | 8_3:-69306061 | Msa1305740:CDS |
| GGCATGGGTTATGCAGCCTT+TGG | 0.414032 | 8_3:-69304648 | Msa1305740:CDS |
| AATCTGTTTGGAATTGCAAT+TGG | 0.419799 | 8_3:-69305775 | Msa1305740:CDS |
| TATATTTCACAAAAGAAGAT+TGG | 0.422296 | 8_3:-69303845 | Msa1305740:CDS |
| CTTGGAATAGTTGGGCTCAA+TGG | 0.435400 | 8_3:+69306319 | None:intergenic |
| TTTGCACTTCAGATGCTTAG+TGG | 0.435901 | 8_3:-69303803 | Msa1305740:CDS |
| AAAATTTCAAGGAAGCTTGA+TGG | 0.436014 | 8_3:-69304985 | Msa1305740:CDS |
| CACAAAAGAAGATTGGTAGA+TGG | 0.438960 | 8_3:-69303838 | Msa1305740:CDS |
| TCTGCAGTTGGATTAGGTCT+AGG | 0.439412 | 8_3:-69305117 | Msa1305740:CDS |
| GTGCACAACAATTGCAAAGT+TGG | 0.444851 | 8_3:+69304557 | None:intergenic |
| ATTTCAATATTAGCTGCTGT+TGG | 0.447054 | 8_3:-69303767 | Msa1305740:CDS |
| ATCACTGCTGTGATAGGCTC+TGG | 0.458270 | 8_3:-69306109 | Msa1305740:CDS |
| TTCAATGAGGATAATGGAAA+AGG | 0.458924 | 8_3:+69304863 | None:intergenic |
| TGTATCCATTGCTTGACATA+TGG | 0.461416 | 8_3:+69305241 | None:intergenic |
| TTCATGGTCTTGTGTTCAGA+AGG | 0.465842 | 8_3:+69304726 | None:intergenic |
| ATAGAAAATGGAAAATTTCA+AGG | 0.466520 | 8_3:-69304996 | Msa1305740:intron |
| TATTTACTATGTGGTGGCAT+GGG | 0.466716 | 8_3:-69304663 | Msa1305740:CDS |
| CTATTTACTATGTGGTGGCA+TGG | 0.467141 | 8_3:-69304664 | Msa1305740:CDS |
| ACTAATTTCTATGGTCTAAG+AGG | 0.476906 | 8_3:-69303509 | Msa1305740:three_prime_UTR |
| GCACTTAGTTGGGGCATACC+AGG | 0.483844 | 8_3:-69304538 | Msa1305740:intron |
| GCCTTTGGAGATCATGTACC+TGG | 0.484040 | 8_3:-69304633 | Msa1305740:CDS |
| GAGTTGGTACACACCAATGC+AGG | 0.487979 | 8_3:+69304012 | None:intergenic |
| AAATTTCAAGGAAGCTTGAT+GGG | 0.493759 | 8_3:-69304984 | Msa1305740:CDS |
| TCGAAGCACTTGGAATAGTT+GGG | 0.495734 | 8_3:+69306311 | None:intergenic |
| GCGAAGAGAATCATGACAAC+AGG | 0.499921 | 8_3:+69306037 | None:intergenic |
| TGTTGGATCCATTGCTGGAG+TGG | 0.501226 | 8_3:-69303750 | Msa1305740:CDS |
| CAATGTCAAGAAGCCAATAA+GGG | 0.505504 | 8_3:+69304580 | None:intergenic |
| GATGGTCGCCTCAAGAGAAC+AGG | 0.506003 | 8_3:-69306284 | Msa1305740:intron |
| GCTTGGGCAATAGCTCAGCT+TGG | 0.509406 | 8_3:-69306073 | Msa1305740:CDS |
| ACACAAGCCGGAACAGTCAC+TGG | 0.511407 | 8_3:-69304942 | Msa1305740:CDS |
| ACCATCGTCGTCGAAGCACT+TGG | 0.513005 | 8_3:+69306301 | None:intergenic |
| TGTGCCACTTTGAAGTTACA+AGG | 0.522675 | 8_3:-69303532 | Msa1305740:three_prime_UTR |
| GGAGGAGTTTACAAGCTCTA+GGG | 0.530559 | 8_3:-69304905 | Msa1305740:CDS |
| TGGAGGAGTTTACAAGCTCT+AGG | 0.533735 | 8_3:-69304906 | Msa1305740:CDS |
| ATCCAAAACCACTCCAGCAA+TGG | 0.538718 | 8_3:+69303742 | None:intergenic |
| AGCTTGATGGGAATTAGCAT+TGG | 0.538971 | 8_3:-69304972 | Msa1305740:CDS |
| ATTGGTGCGGTGACACAAGC+CGG | 0.545386 | 8_3:-69304954 | Msa1305740:CDS |
| GAAATACATATTCCCTGCAT+TGG | 0.545635 | 8_3:-69304025 | Msa1305740:CDS |
| TTTCAGACACTACTTAGAAG+TGG | 0.545928 | 8_3:-69306381 | Msa1305740:CDS |
| TTTACAAGCTCTAGGGGCAA+TGG | 0.553880 | 8_3:-69304898 | Msa1305740:CDS |
| AGAAGTGGAGTTCACGTAAG+TGG | 0.555074 | 8_3:-69304078 | Msa1305740:CDS |
| GAGGATAATGGAAAAGGAGT+AGG | 0.556091 | 8_3:+69304869 | None:intergenic |
| ATTTCTTCCGCTTAGTATGG+AGG | 0.558949 | 8_3:-69303988 | Msa1305740:CDS |
| ACAGTGTTCTATTTACTATG+TGG | 0.563522 | 8_3:-69304672 | Msa1305740:CDS |
| ATGGTCTTGTGTTCAGAAGG+AGG | 0.564496 | 8_3:+69304729 | None:intergenic |
| GTCTTTGCTAAAAGTGAATG+TGG | 0.568057 | 8_3:+69306596 | None:intergenic |
| ATGTTGAACCTGTTCTCTTG+AGG | 0.568328 | 8_3:+69306276 | None:intergenic |
| ACCATACTTGATCAAAGTCT+GGG | 0.568824 | 8_3:+69305178 | None:intergenic |
| AATTGTTGTGCACTTAGTTG+GGG | 0.569503 | 8_3:-69304547 | Msa1305740:CDS |
| CCATGCCATATGTCAAGCAA+TGG | 0.571445 | 8_3:-69305246 | Msa1305740:CDS |
| AATTGTTATCATGAGAGTCA+TGG | 0.575521 | 8_3:-69305276 | Msa1305740:CDS |
| TCCAAGTGCTTCGACGACGA+TGG | 0.576041 | 8_3:-69306302 | Msa1305740:CDS |
| ACTCCATGTTGAAATCTGCT+AGG | 0.577936 | 8_3:+69306508 | None:intergenic |
| CCATTGCTTGACATATGGCA+TGG | 0.582704 | 8_3:+69305246 | None:intergenic |
| TAATTACTTGAATTTCAATG+AGG | 0.589061 | 8_3:+69304850 | None:intergenic |
| GTGTTCTATTTACTATGTGG+TGG | 0.593769 | 8_3:-69304669 | Msa1305740:CDS |
| AACTATGATGCTCACCAAAG+TGG | 0.602438 | 8_3:+69304698 | None:intergenic |
| TAGTCCTTGTAACTTCAAAG+TGG | 0.607640 | 8_3:+69303528 | None:intergenic |
| CAGCTAATATTGAAATGATG+AGG | 0.607869 | 8_3:+69303774 | None:intergenic |
| TCCAACTGCAGAATAAGTGA+AGG | 0.609438 | 8_3:+69305128 | None:intergenic |
| TCCAGGTACATGATCTCCAA+AGG | 0.613687 | 8_3:+69304632 | None:intergenic |
| CTAAGCGGAAGAAATTGAGT+TGG | 0.621124 | 8_3:+69303996 | None:intergenic |
| AGTTGGTACACACCAATGCA+GGG | 0.642172 | 8_3:+69304013 | None:intergenic |
| CTTCCTAGCAGATTTCAACA+TGG | 0.642728 | 8_3:-69306511 | Msa1305740:CDS |
| GAGGAGTTTACAAGCTCTAG+GGG | 0.643999 | 8_3:-69304904 | Msa1305740:CDS |
| AACTCACATCATACTAACTG+AGG | 0.651693 | 8_3:+69305738 | None:intergenic |
| TTCTATAACAGACAGAAGAG+AGG | 0.662581 | 8_3:-69306409 | Msa1305740:intron |
| GTACAAGTGAGTGTGATGAA+TGG | 0.668186 | 8_3:+69306574 | None:intergenic |
| CAGACTTTGATCAAGTATGG+TGG | 0.668858 | 8_3:-69305176 | Msa1305740:CDS |
| GATGGGAATTAGCATTGGTG+CGG | 0.687311 | 8_3:-69304967 | Msa1305740:CDS |
| AGAGTGTCCTCCATACTAAG+CGG | 0.698286 | 8_3:+69303981 | None:intergenic |
| CTGGCACACAGAAAATATGG+AGG | 0.722683 | 8_3:-69304923 | Msa1305740:CDS |
| AGAAGTGTAAAGATTGACGA+CGG | 0.735870 | 8_3:+69306015 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTATTTTTTTTATCATC+AGG | + | chr8_3:69303923-69303942 | None:intergenic | 10.0% |
| !! | TATGAAAATTAATCATTTAA+GGG | - | chr8_3:69304664-69304683 | Msa1305740:CDS | 10.0% |
| !!! | TTAAGTTGATTATATAAAAA+CGG | + | chr8_3:69305609-69305628 | None:intergenic | 10.0% |
| !! | ATAAAAACAACTTATTTATA+TGG | + | chr8_3:69305735-69305754 | None:intergenic | 10.0% |
| !! | AAAATAAATAAAGAATCAAC+TGG | - | chr8_3:69303933-69303952 | Msa1305740:CDS | 15.0% |
| !! | GTATGAAAATTAATCATTTA+AGG | - | chr8_3:69304663-69304682 | Msa1305740:CDS | 15.0% |
| !!! | ATTTTTCATCATATAGAAAA+TGG | - | chr8_3:69305096-69305115 | Msa1305740:intron | 15.0% |
| !! | AATAAGATACAAATTATGTA+TGG | + | chr8_3:69305868-69305887 | None:intergenic | 15.0% |
| !! | TTAGTTTATATTTAGAAGTT+GGG | + | chr8_3:69305927-69305946 | None:intergenic | 15.0% |
| !!! | TTTAGTTTATATTTAGAAGT+TGG | + | chr8_3:69305928-69305947 | None:intergenic | 15.0% |
| !!! | AAAAAATGATAAGTTTGTTT+TGG | - | chr8_3:69306457-69306476 | Msa1305740:intron | 15.0% |
| !! | CACTTCAAACTTTAAATTTA+TGG | - | chr8_3:69303883-69303902 | Msa1305740:CDS | 20.0% |
| !! | CAAAAACAAATCATCAATAT+AGG | + | chr8_3:69304771-69304790 | None:intergenic | 20.0% |
| !! | ATAGAAAATGGAAAATTTCA+AGG | - | chr8_3:69305108-69305127 | Msa1305740:CDS | 20.0% |
| !! | TAATTACTTGAATTTCAATG+AGG | + | chr8_3:69305257-69305276 | None:intergenic | 20.0% |
| !! | ACAACTTATTTATATGGAAA+CGG | + | chr8_3:69305729-69305748 | None:intergenic | 20.0% |
| !! | TTTCTATATTGTATTGTGTT+AGG | - | chr8_3:69305973-69305992 | Msa1305740:CDS | 20.0% |
| !! | ATTAAAAAATGGTAATAGCA+TGG | + | chr8_3:69306173-69306192 | None:intergenic | 20.0% |
| !!! | ATTACCATTTTTTAATGATG+TGG | - | chr8_3:69306177-69306196 | Msa1305740:intron | 20.0% |
| !! | TATATTTCACAAAAGAAGAT+TGG | - | chr8_3:69306259-69306278 | Msa1305740:intron | 20.0% |
| !!! | ACTTAATAACTAGTTTTGAA+TGG | + | chr8_3:69306403-69306422 | None:intergenic | 20.0% |
| !! | AAGTGAATGTGGATTTTTAT+AGG | + | chr8_3:69303500-69303519 | None:intergenic | 25.0% |
| ! | AGCATATGACATTAGAATAT+TGG | + | chr8_3:69303642-69303661 | None:intergenic | 25.0% |
| !!! | TTGATCATGTCATTGTTTTT+TGG | - | chr8_3:69304260-69304279 | Msa1305740:intron | 25.0% |
| !! | TATCAATCAGAATTTTCTTG+AGG | + | chr8_3:69304473-69304492 | None:intergenic | 25.0% |
| !! | CATAGATCAAATTTTCGATA+TGG | + | chr8_3:69304635-69304654 | None:intergenic | 25.0% |
| ! | CATATCGAAAATTTGATCTA+TGG | - | chr8_3:69304633-69304652 | Msa1305740:CDS | 25.0% |
| ! | TTGAATTTCAATGAGGATAA+TGG | + | chr8_3:69305250-69305269 | None:intergenic | 25.0% |
| ! | GATACAAATTATGTATGGAT+TGG | + | chr8_3:69305863-69305882 | None:intergenic | 25.0% |
| ! | CTCAAAAGTTAGTATCTTAT+TGG | - | chr8_3:69305891-69305910 | Msa1305740:intron | 25.0% |
| ! | TTCTCAACAAATGCAAAAAA+GGG | + | chr8_3:69306010-69306029 | None:intergenic | 25.0% |
| ! | ATTGGGTAATAAACTGTTAA+AGG | + | chr8_3:69306232-69306251 | None:intergenic | 25.0% |
| ! | GTGAAATATACATGTCTATT+GGG | + | chr8_3:69306249-69306268 | None:intergenic | 25.0% |
| ! | TGTGAAATATACATGTCTAT+TGG | + | chr8_3:69306250-69306269 | None:intergenic | 25.0% |
| ACATGTAATGTAGTCATGTT+TGG | - | chr8_3:69304216-69304235 | Msa1305740:intron | 30.0% | |
| !!! | TGTCATTGTTTTTTGGTTTC+AGG | - | chr8_3:69304267-69304286 | Msa1305740:intron | 30.0% |
| AGGAAAAAGTTCAAAATGTG+TGG | - | chr8_3:69304290-69304309 | Msa1305740:intron | 30.0% | |
| ATTCAGTATGTGAATCTGTT+TGG | - | chr8_3:69304317-69304336 | Msa1305740:intron | 30.0% | |
| ! | AATCTGTTTGGAATTGCAAT+TGG | - | chr8_3:69304329-69304348 | Msa1305740:intron | 30.0% |
| TAAGAGTTACACTACTTAGT+TGG | - | chr8_3:69304507-69304526 | Msa1305740:intron | 30.0% | |
| ! | TGATTTGCAAGACATTGATA+TGG | + | chr8_3:69304697-69304716 | None:intergenic | 30.0% |
| TGTTTCTTAGGGCAATTAAA+AGG | - | chr8_3:69304802-69304821 | Msa1305740:intron | 30.0% | |
| AATTGTTATCATGAGAGTCA+TGG | - | chr8_3:69304828-69304847 | Msa1305740:intron | 30.0% | |
| AAAATTTCAAGGAAGCTTGA+TGG | - | chr8_3:69305119-69305138 | Msa1305740:CDS | 30.0% | |
| AAATTTCAAGGAAGCTTGAT+GGG | - | chr8_3:69305120-69305139 | Msa1305740:CDS | 30.0% | |
| !! | TTCAATGAGGATAATGGAAA+AGG | + | chr8_3:69305244-69305263 | None:intergenic | 30.0% |
| ACAGTGTTCTATTTACTATG+TGG | - | chr8_3:69305432-69305451 | Msa1305740:intron | 30.0% | |
| TTGGATTCTATAACCCTTAT+TGG | - | chr8_3:69305511-69305530 | Msa1305740:intron | 30.0% | |
| GTTATAGAATCCAAAATACC+TGG | + | chr8_3:69305587-69305606 | None:intergenic | 30.0% | |
| ATAAACTGTATAAGCTCTTC+AGG | + | chr8_3:69305765-69305784 | None:intergenic | 30.0% | |
| CTTCTCAACAAATGCAAAAA+AGG | + | chr8_3:69306011-69306030 | None:intergenic | 30.0% | |
| !! | TTTTTGCATTTGTTGAGAAG+TGG | - | chr8_3:69306011-69306030 | Msa1305740:CDS | 30.0% |
| GCTGTCACAAAATTATTCTT+TGG | + | chr8_3:69306052-69306071 | None:intergenic | 30.0% | |
| CCAACCACATCATTAAAAAA+TGG | + | chr8_3:69306184-69306203 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTAATGATGTGGT+TGG | - | chr8_3:69306181-69306200 | Msa1305740:intron | 30.0% |
| CAGCTAATATTGAAATGATG+AGG | + | chr8_3:69306333-69306352 | None:intergenic | 30.0% | |
| ATTTCAATATTAGCTGCTGT+TGG | - | chr8_3:69306337-69306356 | Msa1305740:CDS | 30.0% | |
| GTTACAAGGACTAATTTCTA+TGG | - | chr8_3:69306586-69306605 | Msa1305740:five_prime_UTR | 30.0% | |
| ACTAATTTCTATGGTCTAAG+AGG | - | chr8_3:69306595-69306614 | Msa1305740:five_prime_UTR | 30.0% | |
| GTCTTTGCTAAAAGTGAATG+TGG | + | chr8_3:69303511-69303530 | None:intergenic | 35.0% | |
| TTCTATAACAGACAGAAGAG+AGG | - | chr8_3:69303695-69303714 | Msa1305740:exon | 35.0% | |
| TTTCAGACACTACTTAGAAG+TGG | - | chr8_3:69303723-69303742 | Msa1305740:CDS | 35.0% | |
| ! | TCAGTCTCAGTTTGGATTTT+GGG | + | chr8_3:69303757-69303776 | None:intergenic | 35.0% |
| ! | TTCAGTCTCAGTTTGGATTT+TGG | + | chr8_3:69303758-69303777 | None:intergenic | 35.0% |
| CATATTATCACTGCTGTGAT+AGG | - | chr8_3:69303989-69304008 | Msa1305740:CDS | 35.0% | |
| ! | AGAAGTGTAAAGATTGACGA+CGG | + | chr8_3:69304092-69304111 | None:intergenic | 35.0% |
| AGAACAGATGACTCTGTTAA+TGG | - | chr8_3:69304133-69304152 | Msa1305740:intron | 35.0% | |
| GATGCAGTAAAGTCTATCTT+AGG | - | chr8_3:69304178-69304197 | Msa1305740:intron | 35.0% | |
| !!! | CATTGTTTTTTGGTTTCAGG+AGG | - | chr8_3:69304270-69304289 | Msa1305740:intron | 35.0% |
| AACTCACATCATACTAACTG+AGG | + | chr8_3:69304369-69304388 | None:intergenic | 35.0% | |
| CTACTCAAAGTATGCTAGTT+TGG | + | chr8_3:69304598-69304617 | None:intergenic | 35.0% | |
| AATGTCTTGCAAATCATCGA+GGG | - | chr8_3:69304701-69304720 | Msa1305740:CDS | 35.0% | |
| GTTTGAATTATACGCATCTG+CGG | + | chr8_3:69304735-69304754 | None:intergenic | 35.0% | |
| ACCTTTGTGCATGTTTCTTA+GGG | - | chr8_3:69304791-69304810 | Msa1305740:intron | 35.0% | |
| TGTATCCATTGCTTGACATA+TGG | + | chr8_3:69304866-69304885 | None:intergenic | 35.0% | |
| ! | TTGATCAAAGTCTGGGATTT+GGG | + | chr8_3:69304922-69304941 | None:intergenic | 35.0% |
| ACCATACTTGATCAAAGTCT+GGG | + | chr8_3:69304929-69304948 | None:intergenic | 35.0% | |
| ACTTATTCTGCAGTTGGATT+AGG | - | chr8_3:69304981-69305000 | Msa1305740:CDS | 35.0% | |
| !!! | AAGCATGTTTGTTTTGTTGC+AGG | - | chr8_3:69305338-69305357 | Msa1305740:intron | 35.0% |
| TGAACACAAGACCATGAAAA+AGG | - | chr8_3:69305383-69305402 | Msa1305740:intron | 35.0% | |
| GTGTTCTATTTACTATGTGG+TGG | - | chr8_3:69305435-69305454 | Msa1305740:intron | 35.0% | |
| TATTTACTATGTGGTGGCAT+GGG | - | chr8_3:69305441-69305460 | Msa1305740:intron | 35.0% | |
| AAACCAGTCAAAAGATTTCC+AGG | + | chr8_3:69305492-69305511 | None:intergenic | 35.0% | |
| !!! | GGAAATCTTTTGACTGGTTT+TGG | - | chr8_3:69305492-69305511 | Msa1305740:intron | 35.0% |
| CAATGTCAAGAAGCCAATAA+GGG | + | chr8_3:69305527-69305546 | None:intergenic | 35.0% | |
| CAATTGTTGTGCACTTAGTT+GGG | - | chr8_3:69305556-69305575 | Msa1305740:intron | 35.0% | |
| AATTGTTGTGCACTTAGTTG+GGG | - | chr8_3:69305557-69305576 | Msa1305740:intron | 35.0% | |
| GAAATACATATTCCCTGCAT+TGG | - | chr8_3:69306079-69306098 | Msa1305740:CDS | 35.0% | |
| TCAATTTCTTCCGCTTAGTA+TGG | - | chr8_3:69306113-69306132 | Msa1305740:CDS | 35.0% | |
| AATGATGTGGTTGGAATACT+TGG | - | chr8_3:69306190-69306209 | Msa1305740:intron | 35.0% | |
| ! | TTGGAATACTTGGAGCTTTT+GGG | - | chr8_3:69306200-69306219 | Msa1305740:intron | 35.0% |
| CACAAAAGAAGATTGGTAGA+TGG | - | chr8_3:69306266-69306285 | Msa1305740:intron | 35.0% | |
| !! | TTGGTAGATGGACTAAAAAG+TGG | - | chr8_3:69306278-69306297 | Msa1305740:intron | 35.0% |
| TAGTCCTTGTAACTTCAAAG+TGG | + | chr8_3:69306579-69306598 | None:intergenic | 35.0% | |
| GTACAAGTGAGTGTGATGAA+TGG | + | chr8_3:69303533-69303552 | None:intergenic | 40.0% | |
| !! | CTAGGAAGTGTTCTACTTCT+TGG | + | chr8_3:69303581-69303600 | None:intergenic | 40.0% |
| CTTCCTAGCAGATTTCAACA+TGG | - | chr8_3:69303593-69303612 | Msa1305740:three_prime_UTR | 40.0% | |
| ACTCCATGTTGAAATCTGCT+AGG | + | chr8_3:69303599-69303618 | None:intergenic | 40.0% | |
| ! | AGACTGATTCAGTCTCAGTT+TGG | + | chr8_3:69303765-69303784 | None:intergenic | 40.0% |
| ! | TCGAAGCACTTGGAATAGTT+GGG | + | chr8_3:69303796-69303815 | None:intergenic | 40.0% |
| ATGTTGAACCTGTTCTCTTG+AGG | + | chr8_3:69303831-69303850 | None:intergenic | 40.0% | |
| AGAATCAACTGGTGTATTGC+AGG | - | chr8_3:69303944-69303963 | Msa1305740:CDS | 40.0% | |
| ! | GGTGTATTGCAGGAACATTT+TGG | - | chr8_3:69303954-69303973 | Msa1305740:CDS | 40.0% |
| ACTTTGAGTAGTAAGCAGCT+CGG | - | chr8_3:69304607-69304626 | Msa1305740:CDS | 40.0% | |
| CAATGTCTTGCAAATCATCG+AGG | - | chr8_3:69304700-69304719 | Msa1305740:CDS | 40.0% | |
| GACCTTTGTGCATGTTTCTT+AGG | - | chr8_3:69304790-69304809 | Msa1305740:intron | 40.0% | |
| ! | CTTGATCAAAGTCTGGGATT+TGG | + | chr8_3:69304923-69304942 | None:intergenic | 40.0% |
| TCCCAGACTTTGATCAAGTA+TGG | - | chr8_3:69304925-69304944 | Msa1305740:CDS | 40.0% | |
| CACCATACTTGATCAAAGTC+TGG | + | chr8_3:69304930-69304949 | None:intergenic | 40.0% | |
| CAGACTTTGATCAAGTATGG+TGG | - | chr8_3:69304928-69304947 | Msa1305740:CDS | 40.0% | |
| TCCTTCACTTATTCTGCAGT+TGG | - | chr8_3:69304975-69304994 | Msa1305740:CDS | 40.0% | |
| TCCAACTGCAGAATAAGTGA+AGG | + | chr8_3:69304979-69304998 | None:intergenic | 40.0% | |
| TATGCTTGAACCTGCAACTT+TGG | + | chr8_3:69305018-69305037 | None:intergenic | 40.0% | |
| AGCTTGATGGGAATTAGCAT+TGG | - | chr8_3:69305132-69305151 | Msa1305740:CDS | 40.0% | |
| TCACTGGCACACAGAAAATA+TGG | - | chr8_3:69305178-69305197 | Msa1305740:CDS | 40.0% | |
| !! | GAGGATAATGGAAAAGGAGT+AGG | + | chr8_3:69305238-69305257 | None:intergenic | 40.0% |
| TTCAGAAGGAGGAGACTTTA+AGG | + | chr8_3:69305367-69305386 | None:intergenic | 40.0% | |
| !! | TTCATGGTCTTGTGTTCAGA+AGG | + | chr8_3:69305381-69305400 | None:intergenic | 40.0% |
| AACTATGATGCTCACCAAAG+TGG | + | chr8_3:69305409-69305428 | None:intergenic | 40.0% | |
| CTATTTACTATGTGGTGGCA+TGG | - | chr8_3:69305440-69305459 | Msa1305740:intron | 40.0% | |
| ! | GTACCTGGAAATCTTTTGAC+TGG | - | chr8_3:69305486-69305505 | Msa1305740:intron | 40.0% |
| GCAATGTCAAGAAGCCAATA+AGG | + | chr8_3:69305528-69305547 | None:intergenic | 40.0% | |
| GTGCACAACAATTGCAAAGT+TGG | + | chr8_3:69305550-69305569 | None:intergenic | 40.0% | |
| GCAATTGTTGTGCACTTAGT+TGG | - | chr8_3:69305555-69305574 | Msa1305740:intron | 40.0% | |
| CTAAGCGGAAGAAATTGAGT+TGG | + | chr8_3:69306111-69306130 | None:intergenic | 40.0% | |
| ATTTCTTCCGCTTAGTATGG+AGG | - | chr8_3:69306116-69306135 | Msa1305740:CDS | 40.0% | |
| ! | GTTGGAATACTTGGAGCTTT+TGG | - | chr8_3:69306199-69306218 | Msa1305740:intron | 40.0% |
| !!! | TACTTGGAGCTTTTGGGTTT+TGG | - | chr8_3:69306206-69306225 | Msa1305740:intron | 40.0% |
| TTTGCACTTCAGATGCTTAG+TGG | - | chr8_3:69306301-69306320 | Msa1305740:CDS | 40.0% | |
| !! | TGTGCCACTTTGAAGTTACA+AGG | - | chr8_3:69306572-69306591 | Msa1305740:five_prime_UTR | 40.0% |
| CTTGGAATAGTTGGGCTCAA+TGG | + | chr8_3:69303788-69303807 | None:intergenic | 45.0% | |
| ! | GTCGAAGCACTTGGAATAGT+TGG | + | chr8_3:69303797-69303816 | None:intergenic | 45.0% |
| !! | TGGAGTGCTTTCATTGGCTT+GGG | - | chr8_3:69304015-69304034 | Msa1305740:CDS | 45.0% |
| GCGAAGAGAATCATGACAAC+AGG | + | chr8_3:69304070-69304089 | None:intergenic | 45.0% | |
| CTTTGAGTAGTAAGCAGCTC+GGG | - | chr8_3:69304608-69304627 | Msa1305740:CDS | 45.0% | |
| GCCCTAAGAAACATGCACAA+AGG | + | chr8_3:69304795-69304814 | None:intergenic | 45.0% | |
| CCATTGCTTGACATATGGCA+TGG | + | chr8_3:69304861-69304880 | None:intergenic | 45.0% | |
| CCATGCCATATGTCAAGCAA+TGG | - | chr8_3:69304858-69304877 | Msa1305740:CDS | 45.0% | |
| GGACATGATAGCTGCAACTA+TGG | + | chr8_3:69304958-69304977 | None:intergenic | 45.0% | |
| ! | TCTGCAGTTGGATTAGGTCT+AGG | - | chr8_3:69304987-69305006 | Msa1305740:CDS | 45.0% |
| !! | GATGGGAATTAGCATTGGTG+CGG | - | chr8_3:69305137-69305156 | Msa1305740:CDS | 45.0% |
| CTGGCACACAGAAAATATGG+AGG | - | chr8_3:69305181-69305200 | Msa1305740:CDS | 45.0% | |
| TGGAGGAGTTTACAAGCTCT+AGG | - | chr8_3:69305198-69305217 | Msa1305740:CDS | 45.0% | |
| GGAGGAGTTTACAAGCTCTA+GGG | - | chr8_3:69305199-69305218 | Msa1305740:CDS | 45.0% | |
| ! | GAGGAGTTTACAAGCTCTAG+GGG | - | chr8_3:69305200-69305219 | Msa1305740:CDS | 45.0% |
| !! | TTTACAAGCTCTAGGGGCAA+TGG | - | chr8_3:69305206-69305225 | Msa1305740:CDS | 45.0% |
| !! | ATGGTCTTGTGTTCAGAAGG+AGG | + | chr8_3:69305378-69305397 | None:intergenic | 45.0% |
| GACCATGAAAAAGGCCACTT+TGG | - | chr8_3:69305392-69305411 | Msa1305740:intron | 45.0% | |
| !! | CACCAAAGTGGCCTTTTTCA+TGG | + | chr8_3:69305397-69305416 | None:intergenic | 45.0% |
| TCCAGGTACATGATCTCCAA+AGG | + | chr8_3:69305475-69305494 | None:intergenic | 45.0% | |
| ! | TTGGGGCATACCAGGTATTT+TGG | - | chr8_3:69305574-69305593 | Msa1305740:intron | 45.0% |
| AGAAGTGGAGTTCACGTAAG+TGG | - | chr8_3:69306026-69306045 | Msa1305740:CDS | 45.0% | |
| ! | AGTTGGTACACACCAATGCA+GGG | + | chr8_3:69306094-69306113 | None:intergenic | 45.0% |
| ! | AGAGTGTCCTCCATACTAAG+CGG | + | chr8_3:69306126-69306145 | None:intergenic | 45.0% |
| ! | ATCCATTGCTGGAGTGGTTT+TGG | - | chr8_3:69306360-69306379 | Msa1305740:CDS | 45.0% |
| ATCCAAAACCACTCCAGCAA+TGG | + | chr8_3:69306365-69306384 | None:intergenic | 45.0% | |
| ATCACTGCTGTGATAGGCTC+TGG | - | chr8_3:69303995-69304014 | Msa1305740:CDS | 50.0% | |
| !! | AGGCTCTGGAGTGCTTTCAT+TGG | - | chr8_3:69304009-69304028 | Msa1305740:CDS | 50.0% |
| ! | CTGGAGTGCTTTCATTGGCT+TGG | - | chr8_3:69304014-69304033 | Msa1305740:CDS | 50.0% |
| GGCAATAGCTCAGCTTGGTT+GGG | - | chr8_3:69304036-69304055 | Msa1305740:CDS | 50.0% | |
| ! | GCCTTTGGAGATCATGTACC+TGG | - | chr8_3:69305471-69305490 | Msa1305740:intron | 50.0% |
| !! | GAGTTGGTACACACCAATGC+AGG | + | chr8_3:69306095-69306114 | None:intergenic | 50.0% |
| TGTTGGATCCATTGCTGGAG+TGG | - | chr8_3:69306354-69306373 | Msa1305740:CDS | 50.0% | |
| TCCAAGTGCTTCGACGACGA+TGG | - | chr8_3:69303802-69303821 | Msa1305740:CDS | 55.0% | |
| ! | ACCATCGTCGTCGAAGCACT+TGG | + | chr8_3:69303806-69303825 | None:intergenic | 55.0% |
| GATGGTCGCCTCAAGAGAAC+AGG | - | chr8_3:69303820-69303839 | Msa1305740:CDS | 55.0% | |
| GCTTGGGCAATAGCTCAGCT+TGG | - | chr8_3:69304031-69304050 | Msa1305740:CDS | 55.0% | |
| GGGCAATAGCTCAGCTTGGT+TGG | - | chr8_3:69304035-69304054 | Msa1305740:CDS | 55.0% | |
| ! | CTAGGCATCGCCAAAGTTGC+AGG | - | chr8_3:69305005-69305024 | Msa1305740:intron | 55.0% |
| ATTGGTGCGGTGACACAAGC+CGG | - | chr8_3:69305150-69305169 | Msa1305740:CDS | 55.0% | |
| ACACAAGCCGGAACAGTCAC+TGG | - | chr8_3:69305162-69305181 | Msa1305740:CDS | 55.0% | |
| CTGTGTGCCAGTGACTGTTC+CGG | + | chr8_3:69305172-69305191 | None:intergenic | 55.0% | |
| ! | GGCATGGGTTATGCAGCCTT+TGG | - | chr8_3:69305456-69305475 | Msa1305740:intron | 55.0% |
| GCACTTAGTTGGGGCATACC+AGG | - | chr8_3:69305566-69305585 | Msa1305740:intron | 55.0% | |
| GCTGCTGTTGGATCCATTGC+TGG | - | chr8_3:69306349-69306368 | Msa1305740:CDS | 55.0% | |
| GCTCAGCTTGGTTGGGCTGT+TGG | - | chr8_3:69304043-69304062 | Msa1305740:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 69303490 | 69306636 | 69303490 | ID=Msa1305740;Name=Msa1305740 |
| chr8_3 | mRNA | 69303490 | 69306636 | 69303490 | ID=Msa1305740-mRNA-1;Parent=Msa1305740;Name=Msa1305740-mRNA-1;_AED=0.14;_eAED=0.14;_QI=82|0.85|0.87|1|1|1|8|216|508 |
| chr8_3 | exon | 69303490 | 69304131 | 69303490 | ID=Msa1305740-mRNA-1:exon:21498;Parent=Msa1305740-mRNA-1 |
| chr8_3 | exon | 69304539 | 69304766 | 69304539 | ID=Msa1305740-mRNA-1:exon:21497;Parent=Msa1305740-mRNA-1 |
| chr8_3 | exon | 69304857 | 69305014 | 69304857 | ID=Msa1305740-mRNA-1:exon:21496;Parent=Msa1305740-mRNA-1 |
| chr8_3 | exon | 69305100 | 69305314 | 69305100 | ID=Msa1305740-mRNA-1:exon:21495;Parent=Msa1305740-mRNA-1 |
| chr8_3 | exon | 69305745 | 69305837 | 69305745 | ID=Msa1305740-mRNA-1:exon:21494;Parent=Msa1305740-mRNA-1 |
| chr8_3 | exon | 69305938 | 69306160 | 69305938 | ID=Msa1305740-mRNA-1:exon:21493;Parent=Msa1305740-mRNA-1 |
| chr8_3 | exon | 69306285 | 69306420 | 69306285 | ID=Msa1305740-mRNA-1:exon:21492;Parent=Msa1305740-mRNA-1 |
| chr8_3 | exon | 69306507 | 69306636 | 69306507 | ID=Msa1305740-mRNA-1:exon:21491;Parent=Msa1305740-mRNA-1 |
| chr8_3 | five_prime_UTR | 69306555 | 69306636 | 69306555 | ID=Msa1305740-mRNA-1:five_prime_utr;Parent=Msa1305740-mRNA-1 |
| chr8_3 | CDS | 69306507 | 69306554 | 69306507 | ID=Msa1305740-mRNA-1:cds;Parent=Msa1305740-mRNA-1 |
| chr8_3 | CDS | 69306285 | 69306420 | 69306285 | ID=Msa1305740-mRNA-1:cds;Parent=Msa1305740-mRNA-1 |
| chr8_3 | CDS | 69305938 | 69306160 | 69305938 | ID=Msa1305740-mRNA-1:cds;Parent=Msa1305740-mRNA-1 |
| chr8_3 | CDS | 69305745 | 69305837 | 69305745 | ID=Msa1305740-mRNA-1:cds;Parent=Msa1305740-mRNA-1 |
| chr8_3 | CDS | 69305100 | 69305314 | 69305100 | ID=Msa1305740-mRNA-1:cds;Parent=Msa1305740-mRNA-1 |
| chr8_3 | CDS | 69304857 | 69305014 | 69304857 | ID=Msa1305740-mRNA-1:cds;Parent=Msa1305740-mRNA-1 |
| chr8_3 | CDS | 69304539 | 69304766 | 69304539 | ID=Msa1305740-mRNA-1:cds;Parent=Msa1305740-mRNA-1 |
| chr8_3 | CDS | 69303706 | 69304131 | 69303706 | ID=Msa1305740-mRNA-1:cds;Parent=Msa1305740-mRNA-1 |
| chr8_3 | three_prime_UTR | 69303490 | 69303705 | 69303490 | ID=Msa1305740-mRNA-1:three_prime_utr;Parent=Msa1305740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
