Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039800 | XP_003626174.1 | 84.211 | 114 | 7 | 1 | 1 | 114 | 1 | 103 | 1.40e-61 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039800 | sp|Q9FJ10|GAT16_ARATH | 54.023 | 87 | 23 | 3 | 21 | 106 | 35 | 105 | 9.05e-18 | 76.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039800 | G7KWI0 | 84.211 | 114 | 7 | 1 | 1 | 114 | 1 | 103 | 6.68e-62 | 194 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1039800 | TF | C2C2-GATA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1039800 | 0.810373 | 1.190782e-50 | -8.615850e-47 |
| Msa0006070 | Msa1039800 | 0.810849 | 9.392032e-51 | -8.615850e-47 |
| Msa0011170 | Msa1039800 | 0.839295 | 1.725652e-57 | -8.615850e-47 |
| Msa0017510 | Msa1039800 | 0.836172 | 1.093758e-56 | -8.615850e-47 |
| Msa0018650 | Msa1039800 | 0.809324 | 2.002061e-50 | -8.615850e-47 |
| Msa0020410 | Msa1039800 | 0.803987 | 2.680917e-49 | -8.615850e-47 |
| Msa0021510 | Msa1039800 | 0.834351 | 3.152135e-56 | -8.615850e-47 |
| Msa0031340 | Msa1039800 | 0.828458 | 8.890572e-55 | -8.615850e-47 |
| Msa0031990 | Msa1039800 | -0.837926 | 3.896420e-57 | -8.615850e-47 |
| Msa0035150 | Msa1039800 | 0.815163 | 1.064164e-51 | -8.615850e-47 |
| Msa0037570 | Msa1039800 | -0.814928 | 1.199872e-51 | -8.615850e-47 |
| Msa0037880 | Msa1039800 | 0.800641 | 1.310386e-48 | -8.615850e-47 |
| Msa0044000 | Msa1039800 | 0.846250 | 2.443758e-59 | -8.615850e-47 |
| Msa0058490 | Msa1039800 | 0.809249 | 2.076876e-50 | -8.615850e-47 |
| Msa0058510 | Msa1039800 | 0.815075 | 1.113403e-51 | -8.615850e-47 |
| Msa0062860 | Msa1039800 | 0.811465 | 6.906671e-51 | -8.615850e-47 |
| Msa0079180 | Msa1039800 | 0.806600 | 7.603036e-50 | -8.615850e-47 |
| Msa0089820 | Msa1039800 | 0.805880 | 1.078189e-49 | -8.615850e-47 |
| Msa0090570 | Msa1039800 | 0.817889 | 2.608433e-52 | -8.615850e-47 |
| Msa0101700 | Msa1039800 | 0.812517 | 4.073983e-51 | -8.615850e-47 |
| Msa0112590 | Msa1039800 | 0.807461 | 4.997155e-50 | -8.615850e-47 |
| Msa0114060 | Msa1039800 | 0.827533 | 1.484673e-54 | -8.615850e-47 |
| Msa0115270 | Msa1039800 | 0.806728 | 7.144168e-50 | -8.615850e-47 |
| Msa0116770 | Msa1039800 | 0.820898 | 5.377688e-53 | -8.615850e-47 |
| Msa0602870 | Msa1039800 | 0.811572 | 6.545547e-51 | -8.615850e-47 |
| Msa0607050 | Msa1039800 | 0.817931 | 2.553272e-52 | -8.615850e-47 |
| Msa0610430 | Msa1039800 | 0.808367 | 3.207423e-50 | -8.615850e-47 |
| Msa0641670 | Msa1039800 | 0.806253 | 9.000355e-50 | -8.615850e-47 |
| Msa0643890 | Msa1039800 | 0.801851 | 7.407744e-49 | -8.615850e-47 |
| Msa0648080 | Msa1039800 | 0.800010 | 1.760873e-48 | -8.615850e-47 |
| Msa0649490 | Msa1039800 | 0.807869 | 4.093439e-50 | -8.615850e-47 |
| Msa0657970 | Msa1039800 | 0.815271 | 1.007163e-51 | -8.615850e-47 |
| Msa0661650 | Msa1039800 | 0.801535 | 8.600513e-49 | -8.615850e-47 |
| Msa0663240 | Msa1039800 | 0.807438 | 5.055752e-50 | -8.615850e-47 |
| Msa0663810 | Msa1039800 | 0.821617 | 3.670243e-53 | -8.615850e-47 |
| Msa0663920 | Msa1039800 | 0.821998 | 2.996217e-53 | -8.615850e-47 |
| Msa0664950 | Msa1039800 | 0.811107 | 8.259157e-51 | -8.615850e-47 |
| Msa0673460 | Msa1039800 | 0.817659 | 2.939887e-52 | -8.615850e-47 |
| Msa0688480 | Msa1039800 | 0.820730 | 5.877243e-53 | -8.615850e-47 |
| Msa0692040 | Msa1039800 | -0.804312 | 2.295010e-49 | -8.615850e-47 |
| Msa0692830 | Msa1039800 | 0.800344 | 1.506041e-48 | -8.615850e-47 |
| Msa0692950 | Msa1039800 | 0.810311 | 1.228028e-50 | -8.615850e-47 |
| Msa0701010 | Msa1039800 | 0.825165 | 5.439068e-54 | -8.615850e-47 |
| Msa0709400 | Msa1039800 | 0.834324 | 3.200965e-56 | -8.615850e-47 |
| Msa0722690 | Msa1039800 | 0.801859 | 7.381228e-49 | -8.615850e-47 |
| Msa0723830 | Msa1039800 | 0.800994 | 1.109903e-48 | -8.615850e-47 |
| Msa0743720 | Msa1039800 | 0.859545 | 3.840764e-63 | -8.615850e-47 |
| Msa0747060 | Msa1039800 | 0.812093 | 5.041183e-51 | -8.615850e-47 |
| Msa0765910 | Msa1039800 | 0.804336 | 2.268200e-49 | -8.615850e-47 |
| Msa0772410 | Msa1039800 | 0.806068 | 9.841216e-50 | -8.615850e-47 |
| Msa0777230 | Msa1039800 | 0.827355 | 1.637904e-54 | -8.615850e-47 |
| Msa0790660 | Msa1039800 | -0.821324 | 4.290045e-53 | -8.615850e-47 |
| Msa0808080 | Msa1039800 | 0.826908 | 2.095645e-54 | -8.615850e-47 |
| Msa0810220 | Msa1039800 | 0.812525 | 4.058085e-51 | -8.615850e-47 |
| Msa0820850 | Msa1039800 | 0.830442 | 2.930825e-55 | -8.615850e-47 |
| Msa0824680 | Msa1039800 | 0.815944 | 7.129527e-52 | -8.615850e-47 |
| Msa0828940 | Msa1039800 | 0.805598 | 1.235329e-49 | -8.615850e-47 |
| Msa0832340 | Msa1039800 | 0.806636 | 7.470865e-50 | -8.615850e-47 |
| Msa0127650 | Msa1039800 | 0.805759 | 1.143272e-49 | -8.615850e-47 |
| Msa0127800 | Msa1039800 | 0.858175 | 9.867153e-63 | -8.615850e-47 |
| Msa0157290 | Msa1039800 | 0.836336 | 9.934082e-57 | -8.615850e-47 |
| Msa0165210 | Msa1039800 | 0.828802 | 7.341522e-55 | -8.615850e-47 |
| Msa0165220 | Msa1039800 | 0.813789 | 2.142959e-51 | -8.615850e-47 |
| Msa0178960 | Msa1039800 | 0.816646 | 4.968487e-52 | -8.615850e-47 |
| Msa0180500 | Msa1039800 | 0.815738 | 7.924588e-52 | -8.615850e-47 |
| Msa0194950 | Msa1039800 | -0.829883 | 4.011118e-55 | -8.615850e-47 |
| Msa0197660 | Msa1039800 | 0.813593 | 2.366366e-51 | -8.615850e-47 |
| Msa0208090 | Msa1039800 | 0.832308 | 1.018211e-55 | -8.615850e-47 |
| Msa0211150 | Msa1039800 | 0.817882 | 2.618354e-52 | -8.615850e-47 |
| Msa0215320 | Msa1039800 | -0.805706 | 1.172625e-49 | -8.615850e-47 |
| Msa0220580 | Msa1039800 | 0.809945 | 1.472479e-50 | -8.615850e-47 |
| Msa0223010 | Msa1039800 | 0.821884 | 3.184105e-53 | -8.615850e-47 |
| Msa0229380 | Msa1039800 | 0.801983 | 6.958435e-49 | -8.615850e-47 |
| Msa0233300 | Msa1039800 | 0.833687 | 4.622906e-56 | -8.615850e-47 |
| Msa0236960 | Msa1039800 | -0.807080 | 6.020017e-50 | -8.615850e-47 |
| Msa0382180 | Msa1039800 | 0.804859 | 1.764141e-49 | -8.615850e-47 |
| Msa0395790 | Msa1039800 | 0.807161 | 5.787405e-50 | -8.615850e-47 |
| Msa0416300 | Msa1039800 | 0.804439 | 2.159476e-49 | -8.615850e-47 |
| Msa0416650 | Msa1039800 | 0.819846 | 9.374034e-53 | -8.615850e-47 |
| Msa0424320 | Msa1039800 | 0.819167 | 1.338917e-52 | -8.615850e-47 |
| Msa0431690 | Msa1039800 | 0.817671 | 2.921427e-52 | -8.615850e-47 |
| Msa0436490 | Msa1039800 | -0.815214 | 1.036839e-51 | -8.615850e-47 |
| Msa0440750 | Msa1039800 | 0.809508 | 1.827711e-50 | -8.615850e-47 |
| Msa0455040 | Msa1039800 | 0.804769 | 1.842244e-49 | -8.615850e-47 |
| Msa0983090 | Msa1039800 | 0.802932 | 4.437405e-49 | -8.615850e-47 |
| Msa0993290 | Msa1039800 | 0.804506 | 2.090518e-49 | -8.615850e-47 |
| Msa0993600 | Msa1039800 | 0.802129 | 6.493847e-49 | -8.615850e-47 |
| Msa1003620 | Msa1039800 | 0.801780 | 7.659473e-49 | -8.615850e-47 |
| Msa1014540 | Msa1039800 | 0.836080 | 1.154141e-56 | -8.615850e-47 |
| Msa1014990 | Msa1039800 | 0.810643 | 1.040935e-50 | -8.615850e-47 |
| Msa1037420 | Msa1039800 | 0.833010 | 6.815312e-56 | -8.615850e-47 |
| Msa1039800 | Msa1075220 | -0.801062 | 1.074843e-48 | -8.615850e-47 |
| Msa1039800 | Msa1075540 | 0.815830 | 7.558932e-52 | -8.615850e-47 |
| Msa1039800 | Msa1075650 | 0.812787 | 3.556725e-51 | -8.615850e-47 |
| Msa1039800 | Msa1081590 | 0.806865 | 6.682534e-50 | -8.615850e-47 |
| Msa1039800 | Msa1081910 | 0.820837 | 5.553085e-53 | -8.615850e-47 |
| Msa1039800 | Msa1082500 | 0.817281 | 3.576728e-52 | -8.615850e-47 |
| Msa1039800 | Msa1083300 | 0.809285 | 2.040909e-50 | -8.615850e-47 |
| Msa1039800 | Msa1100050 | 0.802914 | 4.474507e-49 | -8.615850e-47 |
| Msa1039800 | Msa1109680 | 0.809210 | 2.117841e-50 | -8.615850e-47 |
| Msa1039800 | Msa1124960 | 0.839827 | 1.254992e-57 | -8.615850e-47 |
| Msa1039800 | Msa1137570 | 0.838389 | 2.960997e-57 | -8.615850e-47 |
| Msa1039800 | Msa1142020 | 0.811790 | 5.870666e-51 | -8.615850e-47 |
| Msa1039800 | Msa1150710 | 0.802789 | 4.748935e-49 | -8.615850e-47 |
| Msa1039800 | Msa1162270 | 0.812622 | 3.864564e-51 | -8.615850e-47 |
| Msa1039800 | Msa1167340 | 0.835863 | 1.309941e-56 | -8.615850e-47 |
| Msa1039800 | Msa1174040 | 0.831017 | 2.118465e-55 | -8.615850e-47 |
| Msa1039800 | Msa1181250 | 0.800023 | 1.750450e-48 | -8.615850e-47 |
| Msa1039800 | Msa1193290 | 0.818578 | 1.822155e-52 | -8.615850e-47 |
| Msa1039800 | Msa1210020 | 0.812597 | 3.914271e-51 | -8.615850e-47 |
| Msa1039800 | Msa1211140 | -0.827649 | 1.392474e-54 | -8.615850e-47 |
| Msa1039800 | Msa1221050 | 0.811252 | 7.684115e-51 | -8.615850e-47 |
| Msa1039800 | Msa1222840 | -0.802221 | 6.218811e-49 | -8.615850e-47 |
| Msa1039800 | Msa1226660 | 0.803948 | 2.732208e-49 | -8.615850e-47 |
| Msa1039800 | Msa1228590 | 0.826292 | 2.939154e-54 | -8.615850e-47 |
| Msa1039800 | Msa1233890 | 0.815700 | 8.083754e-52 | -8.615850e-47 |
| Msa1039800 | Msa1244250 | 0.828321 | 9.593267e-55 | -8.615850e-47 |
| Msa1039800 | Msa1244600 | 0.801374 | 9.277797e-49 | -8.615850e-47 |
| Msa1039800 | Msa1244610 | 0.815439 | 9.241418e-52 | -8.615850e-47 |
| Msa1039800 | Msa1246510 | 0.816245 | 6.108838e-52 | -8.615850e-47 |
| Msa1039800 | Msa1247250 | 0.803283 | 3.754230e-49 | -8.615850e-47 |
| Msa1039800 | Msa1253020 | 0.846857 | 1.668901e-59 | -8.615850e-47 |
| Msa1039800 | Msa1259590 | -0.818735 | 1.678121e-52 | -8.615850e-47 |
| Msa1039800 | Msa1275360 | 0.809338 | 1.987537e-50 | -8.615850e-47 |
| Msa1039800 | Msa1277660 | 0.805788 | 1.127009e-49 | -8.615850e-47 |
| Msa1039800 | Msa1279400 | 0.812290 | 4.566349e-51 | -8.615850e-47 |
| Msa1039800 | Msa1284680 | 0.850297 | 1.860567e-60 | -8.615850e-47 |
| Msa1039800 | Msa1293510 | 0.811854 | 5.683174e-51 | -8.615850e-47 |
| Msa1039800 | Msa1298510 | 0.812970 | 3.242544e-51 | -8.615850e-47 |
| Msa1039800 | Msa1299290 | -0.820655 | 6.114205e-53 | -8.615850e-47 |
| Msa1039800 | Msa1305340 | 0.803648 | 3.154100e-49 | -8.615850e-47 |
| Msa1039800 | Msa1332040 | -0.833758 | 4.436736e-56 | -8.615850e-47 |
| Msa1039800 | Msa1348950 | 0.838905 | 2.177849e-57 | -8.615850e-47 |
| Msa1039800 | Msa1353470 | 0.811551 | 6.615539e-51 | -8.615850e-47 |
| Msa1039800 | Msa1362880 | 0.828283 | 9.801038e-55 | -8.615850e-47 |
| Msa1039800 | Msa1370070 | -0.812287 | 4.573147e-51 | -8.615850e-47 |
| Msa1039800 | Msa1372760 | 0.807196 | 5.689036e-50 | -8.615850e-47 |
| Msa1039800 | Msa1374470 | 0.802238 | 6.166888e-49 | -8.615850e-47 |
| Msa1039800 | Msa1382160 | 0.817323 | 3.500826e-52 | -8.615850e-47 |
| Msa1039800 | Msa1385770 | 0.814111 | 1.819398e-51 | -8.615850e-47 |
| Msa1039800 | Msa1404550 | 0.803760 | 2.988997e-49 | -8.615850e-47 |
| Msa1039800 | Msa1409240 | 0.815066 | 1.118409e-51 | -8.615850e-47 |
| Msa1039800 | Msa1410690 | 0.824956 | 6.093335e-54 | -8.615850e-47 |
| Msa1039800 | Msa1411020 | 0.827894 | 1.215423e-54 | -8.615850e-47 |
| Msa1039800 | Msa1412530 | 0.803660 | 3.135289e-49 | -8.615850e-47 |
| Msa1039800 | Msa1412640 | 0.802643 | 5.089265e-49 | -8.615850e-47 |
| Msa1039800 | Msa1420490 | 0.801271 | 9.743581e-49 | -8.615850e-47 |
| Msa1039800 | Msa1423390 | 0.807485 | 4.940566e-50 | -8.615850e-47 |
| Msa1039800 | Msa1424290 | 0.828479 | 8.787538e-55 | -8.615850e-47 |
| Msa1039800 | Msa1424750 | 0.800303 | 1.535669e-48 | -8.615850e-47 |
| Msa1039800 | Msa1427230 | 0.832468 | 9.291641e-56 | -8.615850e-47 |
| Msa1039800 | Msa1434140 | 0.815451 | 9.182659e-52 | -8.615850e-47 |
| Msa1039800 | Msa1434350 | 0.835350 | 1.765751e-56 | -8.615850e-47 |
| Msa1039800 | Msa1439320 | 0.834190 | 3.459154e-56 | -8.615850e-47 |
| Msa1039800 | Msa1440370 | 0.807482 | 4.946897e-50 | -8.615850e-47 |
| Msa1039800 | Msa1440810 | 0.808211 | 3.461458e-50 | -8.615850e-47 |
| Msa1039800 | Msa1450090 | 0.811004 | 8.693969e-51 | -8.615850e-47 |
| Msa1039800 | Msa1451550 | 0.823211 | 1.565317e-53 | -8.615850e-47 |
| Msa1039800 | Msa1453080 | 0.807933 | 3.967825e-50 | -8.615850e-47 |
| Msa1039800 | Msa1459950 | 0.807620 | 4.623654e-50 | -8.615850e-47 |
| Msa1039800 | Msa1460050 | 0.818260 | 2.150406e-52 | -8.615850e-47 |
| Msa1039800 | Msa1460830 | 0.838200 | 3.311520e-57 | -8.615850e-47 |
| Msa1039800 | Msa1466540 | 0.813894 | 2.031023e-51 | -8.615850e-47 |
| Msa0239800 | Msa1039800 | 0.807489 | 4.930131e-50 | -8.615850e-47 |
| Msa0251320 | Msa1039800 | 0.811606 | 6.435109e-51 | -8.615850e-47 |
| Msa0264150 | Msa1039800 | 0.848407 | 6.250143e-60 | -8.615850e-47 |
| Msa0280090 | Msa1039800 | 0.809973 | 1.452235e-50 | -8.615850e-47 |
| Msa0288100 | Msa1039800 | 0.813199 | 2.888713e-51 | -8.615850e-47 |
| Msa0315290 | Msa1039800 | 0.802135 | 6.476930e-49 | -8.615850e-47 |
| Msa0315440 | Msa1039800 | -0.811561 | 6.584302e-51 | -8.615850e-47 |
| Msa0317510 | Msa1039800 | 0.803252 | 3.809344e-49 | -8.615850e-47 |
| Msa0321310 | Msa1039800 | 0.802714 | 4.920545e-49 | -8.615850e-47 |
| Msa0339250 | Msa1039800 | 0.818673 | 1.733618e-52 | -8.615850e-47 |
| Msa0339620 | Msa1039800 | 0.826765 | 2.266340e-54 | -8.615850e-47 |
| Msa0340450 | Msa1039800 | 0.802991 | 4.312853e-49 | -8.615850e-47 |
| Msa0340470 | Msa1039800 | 0.824995 | 5.967494e-54 | -8.615850e-47 |
| Msa0344910 | Msa1039800 | 0.842460 | 2.550695e-58 | -8.615850e-47 |
| Msa0344980 | Msa1039800 | 0.825829 | 3.786196e-54 | -8.615850e-47 |
| Msa0359030 | Msa1039800 | 0.804339 | 2.265758e-49 | -8.615850e-47 |
| Msa0484780 | Msa1039800 | 0.801354 | 9.369220e-49 | -8.615850e-47 |
| Msa0488270 | Msa1039800 | 0.807409 | 5.125805e-50 | -8.615850e-47 |
| Msa0512750 | Msa1039800 | 0.842417 | 2.618597e-58 | -8.615850e-47 |
| Msa0523940 | Msa1039800 | 0.848315 | 6.628260e-60 | -8.615850e-47 |
| Msa0529040 | Msa1039800 | 0.826710 | 2.336469e-54 | -8.615850e-47 |
| Msa0530940 | Msa1039800 | 0.803525 | 3.344829e-49 | -8.615850e-47 |
| Msa0542260 | Msa1039800 | 0.805461 | 1.320227e-49 | -8.615850e-47 |
| Msa0542520 | Msa1039800 | 0.823619 | 1.256395e-53 | -8.615850e-47 |
| Msa0545700 | Msa1039800 | 0.803513 | 3.362999e-49 | -8.615850e-47 |
| Msa0548240 | Msa1039800 | 0.810143 | 1.334386e-50 | -8.615850e-47 |
| Msa0548920 | Msa1039800 | 0.813552 | 2.416435e-51 | -8.615850e-47 |
| Msa0562440 | Msa1039800 | 0.819245 | 1.285353e-52 | -8.615850e-47 |
| Msa0585230 | Msa1039800 | 0.805952 | 1.041174e-49 | -8.615850e-47 |
| Msa0592440 | Msa1039800 | 0.800611 | 1.328658e-48 | -8.615850e-47 |
| Msa0597330 | Msa1039800 | 0.802143 | 6.452255e-49 | -8.615850e-47 |
| Msa0602390 | Msa1039800 | 0.833185 | 6.165167e-56 | -8.615850e-47 |
| Msa0842650 | Msa1039800 | 0.810812 | 9.569615e-51 | -8.615850e-47 |
| Msa0849030 | Msa1039800 | 0.838933 | 2.142439e-57 | -8.615850e-47 |
| Msa0857640 | Msa1039800 | 0.818285 | 2.123244e-52 | -8.615850e-47 |
| Msa0861130 | Msa1039800 | 0.814417 | 1.557216e-51 | -8.615850e-47 |
| Msa0877250 | Msa1039800 | 0.817786 | 2.753075e-52 | -8.615850e-47 |
| Msa0880020 | Msa1039800 | 0.819877 | 9.220560e-53 | -8.615850e-47 |
| Msa0880140 | Msa1039800 | 0.831881 | 1.297923e-55 | -8.615850e-47 |
| Msa0907070 | Msa1039800 | 0.820677 | 6.045080e-53 | -8.615850e-47 |
| Msa0925290 | Msa1039800 | 0.804276 | 2.335020e-49 | -8.615850e-47 |
| Msa0927380 | Msa1039800 | 0.820654 | 6.117580e-53 | -8.615850e-47 |
| Msa0933100 | Msa1039800 | 0.810884 | 9.233240e-51 | -8.615850e-47 |
| Msa0945970 | Msa1039800 | 0.810346 | 1.206497e-50 | -8.615850e-47 |
| Msa0947660 | Msa1039800 | 0.810517 | 1.108490e-50 | -8.615850e-47 |
| Msa0964900 | Msa1039800 | 0.800292 | 1.543116e-48 | -8.615850e-47 |
| Msa0966750 | Msa1039800 | 0.826595 | 2.488427e-54 | -8.615850e-47 |
| Msa0969520 | Msa1039800 | 0.810567 | 1.081178e-50 | -8.615850e-47 |
| Msa0969730 | Msa1039800 | 0.800574 | 1.352108e-48 | -8.615850e-47 |
| Msa0974070 | Msa1039800 | 0.811066 | 8.431384e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039800 | MtrunA17_Chr7g0271861 | 84.211 | 114 | 7 | 1 | 1 | 114 | 1 | 103 | 1.29e-65 | 194 |
| Msa1039800 | MtrunA17_Chr4g0068031 | 45.833 | 96 | 43 | 2 | 21 | 113 | 29 | 118 | 8.48e-16 | 68.6 |
| Msa1039800 | MtrunA17_Chr1g0213161 | 54.348 | 46 | 20 | 1 | 14 | 59 | 145 | 189 | 1.06e-13 | 64.7 |
| Msa1039800 | MtrunA17_Chr1g0151461 | 61.905 | 42 | 16 | 0 | 22 | 63 | 187 | 228 | 1.70e-13 | 64.7 |
| Msa1039800 | MtrunA17_Chr2g0326771 | 57.778 | 45 | 19 | 0 | 13 | 57 | 207 | 251 | 3.11e-13 | 63.9 |
| Msa1039800 | MtrunA17_Chr5g0404131 | 60.526 | 38 | 15 | 0 | 18 | 55 | 188 | 225 | 2.15e-12 | 61.6 |
| Msa1039800 | MtrunA17_Chr8g0373231 | 62.162 | 37 | 14 | 0 | 19 | 55 | 122 | 158 | 2.54e-12 | 60.8 |
| Msa1039800 | MtrunA17_Chr4g0071301 | 80.000 | 30 | 6 | 0 | 22 | 51 | 192 | 221 | 2.81e-12 | 61.6 |
| Msa1039800 | MtrunA17_Chr2g0299081 | 76.667 | 30 | 7 | 0 | 22 | 51 | 169 | 198 | 5.57e-12 | 60.5 |
| Msa1039800 | MtrunA17_Chr3g0140331 | 67.647 | 34 | 11 | 0 | 24 | 57 | 255 | 288 | 1.34e-11 | 59.7 |
| Msa1039800 | MtrunA17_Chr4g0028961 | 49.091 | 55 | 27 | 1 | 3 | 57 | 214 | 267 | 1.60e-11 | 59.3 |
| Msa1039800 | MtrunA17_Chr1g0146231 | 70.588 | 34 | 10 | 0 | 24 | 57 | 236 | 269 | 2.50e-11 | 58.9 |
| Msa1039800 | MtrunA17_Chr5g0404981 | 56.098 | 41 | 18 | 0 | 17 | 57 | 295 | 335 | 3.12e-11 | 58.5 |
| Msa1039800 | MtrunA17_Chr1g0199671 | 67.647 | 34 | 11 | 0 | 24 | 57 | 244 | 277 | 3.91e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039800 | AT5G49300.1 | 54.023 | 87 | 23 | 3 | 21 | 106 | 35 | 105 | 9.20e-19 | 76.3 |
| Msa1039800 | AT3G06740.1 | 41.935 | 93 | 39 | 1 | 21 | 113 | 40 | 117 | 1.04e-18 | 76.3 |
| Msa1039800 | AT5G26930.1 | 72.093 | 43 | 11 | 1 | 15 | 57 | 20 | 61 | 6.25e-17 | 71.2 |
| Msa1039800 | AT5G56860.1 | 78.947 | 38 | 7 | 1 | 18 | 55 | 227 | 263 | 3.38e-15 | 70.5 |
| Msa1039800 | AT4G16141.1 | 72.973 | 37 | 10 | 0 | 21 | 57 | 36 | 72 | 7.46e-14 | 64.7 |
| Msa1039800 | AT4G26150.1 | 80.645 | 31 | 6 | 0 | 22 | 52 | 199 | 229 | 1.17e-13 | 65.9 |
| Msa1039800 | AT4G36620.1 | 42.647 | 68 | 28 | 1 | 19 | 86 | 72 | 128 | 1.31e-13 | 64.3 |
| Msa1039800 | AT3G16870.1 | 53.846 | 52 | 24 | 0 | 21 | 72 | 41 | 92 | 1.72e-13 | 63.9 |
| Msa1039800 | AT1G08010.2 | 65.000 | 40 | 13 | 1 | 18 | 57 | 217 | 255 | 7.11e-13 | 63.5 |
| Msa1039800 | AT1G08010.1 | 65.000 | 40 | 13 | 1 | 18 | 57 | 217 | 255 | 7.11e-13 | 63.5 |
| Msa1039800 | AT1G08010.3 | 65.000 | 40 | 13 | 1 | 18 | 57 | 217 | 255 | 7.11e-13 | 63.5 |
| Msa1039800 | AT2G18380.1 | 52.941 | 51 | 21 | 1 | 8 | 55 | 75 | 125 | 1.72e-12 | 61.6 |
| Msa1039800 | AT3G50870.1 | 55.319 | 47 | 19 | 1 | 19 | 63 | 149 | 195 | 4.01e-12 | 61.2 |
| Msa1039800 | AT3G45170.1 | 65.789 | 38 | 13 | 0 | 17 | 54 | 110 | 147 | 4.51e-11 | 57.8 |
| Msa1039800 | AT5G25830.1 | 53.061 | 49 | 23 | 0 | 9 | 57 | 206 | 254 | 5.45e-11 | 58.2 |
| Msa1039800 | AT4G34680.1 | 58.537 | 41 | 17 | 0 | 19 | 59 | 177 | 217 | 5.94e-11 | 57.8 |
| Msa1039800 | AT4G34680.2 | 58.537 | 41 | 17 | 0 | 19 | 59 | 177 | 217 | 5.94e-11 | 57.8 |
| Msa1039800 | AT1G08000.2 | 57.895 | 38 | 16 | 0 | 20 | 57 | 216 | 253 | 7.03e-11 | 57.8 |
| Msa1039800 | AT1G08000.1 | 57.895 | 38 | 16 | 0 | 20 | 57 | 216 | 253 | 7.03e-11 | 57.8 |
Find 57 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGAGAAAGAGAGAGAAAA+TGG | 0.255654 | 7_1:+77105478 | None:intergenic |
| CCCTAGTCCCTAACAAGATT+TGG | 0.304180 | 7_1:+77104321 | None:intergenic |
| ACTGAGTTCCAAATCTTGTT+AGG | 0.306160 | 7_1:-77104329 | Msa1039800:three_prime_UTR |
| TCCTCTCCAAAGTGGTGTTT+TGG | 0.317787 | 7_1:+77105129 | None:intergenic |
| TCACAACACTGAAACAATAA+TGG | 0.342961 | 7_1:+77105360 | None:intergenic |
| AATGATACCTTGGGTCCATT+TGG | 0.368205 | 7_1:+77105103 | None:intergenic |
| TTTCGTTTCGGTGTGTGATT+CGG | 0.397003 | 7_1:-77105424 | Msa1039800:five_prime_UTR |
| AATGGGAATCATGGATCAAA+TGG | 0.411033 | 7_1:-77105333 | Msa1039800:CDS |
| ATGTTGTTCATACGATGAAA+TGG | 0.428480 | 7_1:-77105188 | Msa1039800:CDS |
| AGGGAAAGGAAGAGAGAGAA+AGG | 0.432833 | 7_1:-77104769 | Msa1039800:CDS |
| GCACAGAATGGGAATGGGAG+GGG | 0.445124 | 7_1:-77104745 | Msa1039800:CDS |
| TGTGCAACGCTTGTGGAATC+AGG | 0.447660 | 7_1:-77104831 | Msa1039800:CDS |
| GAAAATGAAGTTAGTGGCAT+TGG | 0.448903 | 7_1:-77104671 | Msa1039800:CDS |
| TCCAAATCTTGTTAGGGACT+AGG | 0.460368 | 7_1:-77104322 | Msa1039800:three_prime_UTR |
| TTTCAGTGTTGTGAATCAAA+TGG | 0.461831 | 7_1:-77105351 | Msa1039800:exon |
| AGTAGAAACAAGTTTCGTTT+CGG | 0.463442 | 7_1:-77105436 | Msa1039800:five_prime_UTR |
| CCAAATCTTGTTAGGGACTA+GGG | 0.469956 | 7_1:-77104321 | Msa1039800:three_prime_UTR |
| TAAATATGAACGATACTAAA+CGG | 0.470728 | 7_1:+77105395 | None:intergenic |
| GAGAGAAAGGTGCACAGAAT+GGG | 0.472351 | 7_1:-77104756 | Msa1039800:CDS |
| AATCATGGATCAAATGGATA+AGG | 0.481862 | 7_1:-77105327 | Msa1039800:intron |
| CTGAGTTCCAAATCTTGTTA+GGG | 0.482520 | 7_1:-77104328 | Msa1039800:three_prime_UTR |
| AGAGAGAAAGGTGCACAGAA+TGG | 0.485338 | 7_1:-77104757 | Msa1039800:CDS |
| AAAATGAAGTTAGTGGCATT+GGG | 0.487144 | 7_1:-77104670 | Msa1039800:CDS |
| GTGTTTGAAAATGAAGTTAG+TGG | 0.497670 | 7_1:-77104677 | Msa1039800:CDS |
| TTAAAATGTTAGAAGAAGGA+GGG | 0.498806 | 7_1:-77104523 | Msa1039800:three_prime_UTR |
| AAAGGTGCACAGAATGGGAA+TGG | 0.500630 | 7_1:-77104751 | Msa1039800:CDS |
| TATATTAAAATGTTAGAAGA+AGG | 0.501670 | 7_1:-77104527 | Msa1039800:three_prime_UTR |
| ATTAAAATGTTAGAAGAAGG+AGG | 0.502683 | 7_1:-77104524 | Msa1039800:three_prime_UTR |
| CTTTGGAGAGGAGGACCAAA+TGG | 0.503109 | 7_1:-77105118 | Msa1039800:CDS |
| TTCAGTGTTGTGAATCAAAT+GGG | 0.509228 | 7_1:-77105350 | Msa1039800:exon |
| TGTGAATCAAATGGGAATCA+TGG | 0.514991 | 7_1:-77105342 | Msa1039800:exon |
| TGTTTGATGGCACTCTCTTG+TGG | 0.524330 | 7_1:-77104580 | Msa1039800:three_prime_UTR |
| TTGTAGCAAAGGACAAGAAA+GGG | 0.531317 | 7_1:-77104788 | Msa1039800:CDS |
| AAACCACCAAAACACCACTT+TGG | 0.542523 | 7_1:-77105135 | Msa1039800:CDS |
| ACAAGCTGCTGTGTGTTTGA+TGG | 0.545240 | 7_1:-77104593 | Msa1039800:three_prime_UTR |
| GTTGTAGCAAAGGACAAGAA+AGG | 0.552771 | 7_1:-77104789 | Msa1039800:CDS |
| TGTTGTTCATACGATGAAAT+GGG | 0.559954 | 7_1:-77105187 | Msa1039800:CDS |
| AAGGATTAAACTAGGTGAAG+AGG | 0.572329 | 7_1:-77104617 | Msa1039800:three_prime_UTR |
| AAGGTGCACAGAATGGGAAT+GGG | 0.575912 | 7_1:-77104750 | Msa1039800:CDS |
| AAATAAAGAAGGATTAAACT+AGG | 0.575951 | 7_1:-77104625 | Msa1039800:exon |
| AATCAGGTACAGAAAGAGAA+GGG | 0.588011 | 7_1:-77104815 | Msa1039800:CDS |
| AGAAGGGGTTGTTGTAGCAA+AGG | 0.588421 | 7_1:-77104799 | Msa1039800:CDS |
| GCAAAGGACAAGAAAGGGAA+AGG | 0.589633 | 7_1:-77104783 | Msa1039800:CDS |
| GTGCACAGAATGGGAATGGG+AGG | 0.593014 | 7_1:-77104747 | Msa1039800:CDS |
| TAAAATGTTAGAAGAAGGAG+GGG | 0.596898 | 7_1:-77104522 | Msa1039800:three_prime_UTR |
| CAGAATGGGAATGGGAGGGG+TGG | 0.600363 | 7_1:-77104742 | Msa1039800:CDS |
| TAGACGTTGTGCAACGCTTG+TGG | 0.606961 | 7_1:-77104838 | Msa1039800:CDS |
| TGCACAGAATGGGAATGGGA+GGG | 0.611263 | 7_1:-77104746 | Msa1039800:CDS |
| GGTGGTACTAGCAGTAGCAG+TGG | 0.618851 | 7_1:-77104724 | Msa1039800:CDS |
| GAATCAGGTACAGAAAGAGA+AGG | 0.619622 | 7_1:-77104816 | Msa1039800:CDS |
| TTTGGTCCTCCTCTCCAAAG+TGG | 0.621363 | 7_1:+77105121 | None:intergenic |
| AAAACACCACTTTGGAGAGG+AGG | 0.625709 | 7_1:-77105127 | Msa1039800:CDS |
| AGGAGGACCAAATGGACCCA+AGG | 0.633971 | 7_1:-77105110 | Msa1039800:intron |
| TTGTTAGGGACTAGGGAGTG+AGG | 0.653298 | 7_1:-77104314 | Msa1039800:three_prime_UTR |
| TTAGGGACTAGGGAGTGAGG+TGG | 0.666308 | 7_1:-77104311 | Msa1039800:three_prime_UTR |
| ACCAAAACACCACTTTGGAG+AGG | 0.669357 | 7_1:-77105130 | Msa1039800:CDS |
| ATCAGGTACAGAAAGAGAAG+GGG | 0.680743 | 7_1:-77104814 | Msa1039800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTTATTAATTTGATTAA+AGG | - | chr7_1:77104851-77104870 | Msa1039800:intron | 10.0% |
| !!! | TGTTTATTAATTTGATTAAA+GGG | - | chr7_1:77104852-77104871 | Msa1039800:intron | 10.0% |
| !!! | ATGTTTATTAATTTGATTAA+AGG | - | chr7_1:77104851-77104870 | Msa1039800:intron | 10.0% |
| !!! | TGTTTATTAATTTGATTAAA+GGG | - | chr7_1:77104852-77104871 | Msa1039800:intron | 10.0% |
| !! | AAAAAAAAAAATGATACCTT+GGG | + | chr7_1:77104683-77104702 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAATGATACCT+TGG | + | chr7_1:77104684-77104703 | None:intergenic | 15.0% |
| !!! | GTTTTCAAATATAGATAAAA+TGG | + | chr7_1:77104760-77104779 | None:intergenic | 15.0% |
| !! | AAGTGAATAATATATCAAAT+TGG | + | chr7_1:77104788-77104807 | None:intergenic | 15.0% |
| !! | AAACAATAATCATATCAAAA+AGG | + | chr7_1:77104817-77104836 | None:intergenic | 15.0% |
| !!! | ATGATTTTTTTGTTTTTGTT+GGG | - | chr7_1:77104908-77104927 | Msa1039800:intron | 15.0% |
| !!! | CATTTTAATATATTGAATGA+TGG | + | chr7_1:77105239-77105258 | None:intergenic | 15.0% |
| !! | TATATTAAAATGTTAGAAGA+AGG | - | chr7_1:77105247-77105266 | Msa1039800:intron | 15.0% |
| !! | AAAAAAAAAAATGATACCTT+GGG | + | chr7_1:77104683-77104702 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAATGATACCT+TGG | + | chr7_1:77104684-77104703 | None:intergenic | 15.0% |
| !!! | GTTTTCAAATATAGATAAAA+TGG | + | chr7_1:77104760-77104779 | None:intergenic | 15.0% |
| !! | AAGTGAATAATATATCAAAT+TGG | + | chr7_1:77104788-77104807 | None:intergenic | 15.0% |
| !! | AAACAATAATCATATCAAAA+AGG | + | chr7_1:77104817-77104836 | None:intergenic | 15.0% |
| !!! | ATGATTTTTTTGTTTTTGTT+GGG | - | chr7_1:77104908-77104927 | Msa1039800:intron | 15.0% |
| !!! | CATTTTAATATATTGAATGA+TGG | + | chr7_1:77105239-77105258 | None:intergenic | 15.0% |
| !! | TATATTAAAATGTTAGAAGA+AGG | - | chr7_1:77105247-77105266 | Msa1039800:intron | 15.0% |
| !! | TAAATATGAACGATACTAAA+CGG | + | chr7_1:77104382-77104401 | None:intergenic | 20.0% |
| !! | AAGTTACAAAATGATGAAAT+GGG | + | chr7_1:77104711-77104730 | None:intergenic | 20.0% |
| !! | TAAGTTACAAAATGATGAAA+TGG | + | chr7_1:77104712-77104731 | None:intergenic | 20.0% |
| !! | TGAATAATATATCAAATTGG+TGG | + | chr7_1:77104785-77104804 | None:intergenic | 20.0% |
| !!! | GATGATTTTTTTGTTTTTGT+TGG | - | chr7_1:77104907-77104926 | Msa1039800:intron | 20.0% |
| !! | TGTTGCAAAAAAAATAAAGA+AGG | - | chr7_1:77105138-77105157 | Msa1039800:CDS | 20.0% |
| !! | AAATAAAGAAGGATTAAACT+AGG | - | chr7_1:77105149-77105168 | Msa1039800:CDS | 20.0% |
| !!! | CTTTCTTTAGTTTTTAGAAA+GGG | - | chr7_1:77105410-77105429 | Msa1039800:five_prime_UTR | 20.0% |
| !! | TAAATATGAACGATACTAAA+CGG | + | chr7_1:77104382-77104401 | None:intergenic | 20.0% |
| !! | AAGTTACAAAATGATGAAAT+GGG | + | chr7_1:77104711-77104730 | None:intergenic | 20.0% |
| !! | TAAGTTACAAAATGATGAAA+TGG | + | chr7_1:77104712-77104731 | None:intergenic | 20.0% |
| !! | TGAATAATATATCAAATTGG+TGG | + | chr7_1:77104785-77104804 | None:intergenic | 20.0% |
| !!! | GATGATTTTTTTGTTTTTGT+TGG | - | chr7_1:77104907-77104926 | Msa1039800:intron | 20.0% |
| !! | TGTTGCAAAAAAAATAAAGA+AGG | - | chr7_1:77105138-77105157 | Msa1039800:CDS | 20.0% |
| !! | AAATAAAGAAGGATTAAACT+AGG | - | chr7_1:77105149-77105168 | Msa1039800:CDS | 20.0% |
| !!! | CTTTCTTTAGTTTTTAGAAA+GGG | - | chr7_1:77105410-77105429 | Msa1039800:five_prime_UTR | 20.0% |
| ! | CTTCTTTCTATTTGTTTAAC+AGG | - | chr7_1:77104562-77104581 | Msa1039800:three_prime_UTR | 25.0% |
| ! | AGATAAAATGGAAGTGAAAA+AGG | + | chr7_1:77104748-77104767 | None:intergenic | 25.0% |
| ! | ATTAAAATGTTAGAAGAAGG+AGG | - | chr7_1:77105250-77105269 | Msa1039800:intron | 25.0% |
| ! | TTAAAATGTTAGAAGAAGGA+GGG | - | chr7_1:77105251-77105270 | Msa1039800:intron | 25.0% |
| ! | AAAGAGAGAAAACAAAAAAG+AGG | + | chr7_1:77105352-77105371 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTCTCTCTTTCTT+TGG | - | chr7_1:77105355-77105374 | Msa1039800:five_prime_UTR | 25.0% |
| !! | CCTTTCTAAAAACTAAAGAA+AGG | + | chr7_1:77105412-77105431 | None:intergenic | 25.0% |
| !!! | CCTTTCTTTAGTTTTTAGAA+AGG | - | chr7_1:77105409-77105428 | Msa1039800:five_prime_UTR | 25.0% |
| ! | CTTCTTTCTATTTGTTTAAC+AGG | - | chr7_1:77104562-77104581 | Msa1039800:three_prime_UTR | 25.0% |
| ! | AGATAAAATGGAAGTGAAAA+AGG | + | chr7_1:77104748-77104767 | None:intergenic | 25.0% |
| ! | ATTAAAATGTTAGAAGAAGG+AGG | - | chr7_1:77105250-77105269 | Msa1039800:intron | 25.0% |
| ! | TTAAAATGTTAGAAGAAGGA+GGG | - | chr7_1:77105251-77105270 | Msa1039800:intron | 25.0% |
| ! | AAAGAGAGAAAACAAAAAAG+AGG | + | chr7_1:77105352-77105371 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTCTCTCTTTCTT+TGG | - | chr7_1:77105355-77105374 | Msa1039800:five_prime_UTR | 25.0% |
| !! | CCTTTCTAAAAACTAAAGAA+AGG | + | chr7_1:77105412-77105431 | None:intergenic | 25.0% |
| !!! | CCTTTCTTTAGTTTTTAGAA+AGG | - | chr7_1:77105409-77105428 | Msa1039800:five_prime_UTR | 25.0% |
| AGTAGAAACAAGTTTCGTTT+CGG | - | chr7_1:77104338-77104357 | Msa1039800:three_prime_UTR | 30.0% | |
| TCACAACACTGAAACAATAA+TGG | + | chr7_1:77104417-77104436 | None:intergenic | 30.0% | |
| TTTCAGTGTTGTGAATCAAA+TGG | - | chr7_1:77104423-77104442 | Msa1039800:three_prime_UTR | 30.0% | |
| TTCAGTGTTGTGAATCAAAT+GGG | - | chr7_1:77104424-77104443 | Msa1039800:three_prime_UTR | 30.0% | |
| AATCATGGATCAAATGGATA+AGG | - | chr7_1:77104447-77104466 | Msa1039800:three_prime_UTR | 30.0% | |
| ATGTTGTTCATACGATGAAA+TGG | - | chr7_1:77104586-77104605 | Msa1039800:three_prime_UTR | 30.0% | |
| TGTTGTTCATACGATGAAAT+GGG | - | chr7_1:77104587-77104606 | Msa1039800:three_prime_UTR | 30.0% | |
| GTGTTTGAAAATGAAGTTAG+TGG | - | chr7_1:77105097-77105116 | Msa1039800:intron | 30.0% | |
| AAAATGAAGTTAGTGGCATT+GGG | - | chr7_1:77105104-77105123 | Msa1039800:intron | 30.0% | |
| TAAAATGTTAGAAGAAGGAG+GGG | - | chr7_1:77105252-77105271 | Msa1039800:intron | 30.0% | |
| AGTAGAAACAAGTTTCGTTT+CGG | - | chr7_1:77104338-77104357 | Msa1039800:three_prime_UTR | 30.0% | |
| TCACAACACTGAAACAATAA+TGG | + | chr7_1:77104417-77104436 | None:intergenic | 30.0% | |
| TTTCAGTGTTGTGAATCAAA+TGG | - | chr7_1:77104423-77104442 | Msa1039800:three_prime_UTR | 30.0% | |
| TTCAGTGTTGTGAATCAAAT+GGG | - | chr7_1:77104424-77104443 | Msa1039800:three_prime_UTR | 30.0% | |
| AATCATGGATCAAATGGATA+AGG | - | chr7_1:77104447-77104466 | Msa1039800:three_prime_UTR | 30.0% | |
| ATGTTGTTCATACGATGAAA+TGG | - | chr7_1:77104586-77104605 | Msa1039800:three_prime_UTR | 30.0% | |
| TGTTGTTCATACGATGAAAT+GGG | - | chr7_1:77104587-77104606 | Msa1039800:three_prime_UTR | 30.0% | |
| GTGTTTGAAAATGAAGTTAG+TGG | - | chr7_1:77105097-77105116 | Msa1039800:intron | 30.0% | |
| AAAATGAAGTTAGTGGCATT+GGG | - | chr7_1:77105104-77105123 | Msa1039800:intron | 30.0% | |
| TAAAATGTTAGAAGAAGGAG+GGG | - | chr7_1:77105252-77105271 | Msa1039800:intron | 30.0% | |
| TGTGAATCAAATGGGAATCA+TGG | - | chr7_1:77104432-77104451 | Msa1039800:three_prime_UTR | 35.0% | |
| AATGGGAATCATGGATCAAA+TGG | - | chr7_1:77104441-77104460 | Msa1039800:three_prime_UTR | 35.0% | |
| TTTCTTTGAGCTAACTAGCT+AGG | - | chr7_1:77104484-77104503 | Msa1039800:three_prime_UTR | 35.0% | |
| AATCAGGTACAGAAAGAGAA+GGG | - | chr7_1:77104959-77104978 | Msa1039800:intron | 35.0% | |
| TTGTAGCAAAGGACAAGAAA+GGG | - | chr7_1:77104986-77105005 | Msa1039800:intron | 35.0% | |
| GAAAATGAAGTTAGTGGCAT+TGG | - | chr7_1:77105103-77105122 | Msa1039800:intron | 35.0% | |
| AAGGATTAAACTAGGTGAAG+AGG | - | chr7_1:77105157-77105176 | Msa1039800:CDS | 35.0% | |
| ACTGAGTTCCAAATCTTGTT+AGG | - | chr7_1:77105445-77105464 | Msa1039800:five_prime_UTR | 35.0% | |
| CTGAGTTCCAAATCTTGTTA+GGG | - | chr7_1:77105446-77105465 | Msa1039800:five_prime_UTR | 35.0% | |
| GAGAGAAAGAGAGAGAAAAT+TGG | + | chr7_1:77104298-77104317 | None:intergenic | 35.0% | |
| TGTGAATCAAATGGGAATCA+TGG | - | chr7_1:77104432-77104451 | Msa1039800:three_prime_UTR | 35.0% | |
| AATGGGAATCATGGATCAAA+TGG | - | chr7_1:77104441-77104460 | Msa1039800:three_prime_UTR | 35.0% | |
| TTTCTTTGAGCTAACTAGCT+AGG | - | chr7_1:77104484-77104503 | Msa1039800:three_prime_UTR | 35.0% | |
| AATCAGGTACAGAAAGAGAA+GGG | - | chr7_1:77104959-77104978 | Msa1039800:intron | 35.0% | |
| TTGTAGCAAAGGACAAGAAA+GGG | - | chr7_1:77104986-77105005 | Msa1039800:intron | 35.0% | |
| GAAAATGAAGTTAGTGGCAT+TGG | - | chr7_1:77105103-77105122 | Msa1039800:intron | 35.0% | |
| AAGGATTAAACTAGGTGAAG+AGG | - | chr7_1:77105157-77105176 | Msa1039800:CDS | 35.0% | |
| ACTGAGTTCCAAATCTTGTT+AGG | - | chr7_1:77105445-77105464 | Msa1039800:five_prime_UTR | 35.0% | |
| CTGAGTTCCAAATCTTGTTA+GGG | - | chr7_1:77105446-77105465 | Msa1039800:five_prime_UTR | 35.0% | |
| ! | TTTCGTTTCGGTGTGTGATT+CGG | - | chr7_1:77104350-77104369 | Msa1039800:three_prime_UTR | 40.0% |
| AAACCACCAAAACACCACTT+TGG | - | chr7_1:77104639-77104658 | Msa1039800:exon | 40.0% | |
| AATGATACCTTGGGTCCATT+TGG | + | chr7_1:77104674-77104693 | None:intergenic | 40.0% | |
| GAATCAGGTACAGAAAGAGA+AGG | - | chr7_1:77104958-77104977 | Msa1039800:intron | 40.0% | |
| ATCAGGTACAGAAAGAGAAG+GGG | - | chr7_1:77104960-77104979 | Msa1039800:intron | 40.0% | |
| GTTGTAGCAAAGGACAAGAA+AGG | - | chr7_1:77104985-77105004 | Msa1039800:intron | 40.0% | |
| TCCAAATCTTGTTAGGGACT+AGG | - | chr7_1:77105452-77105471 | Msa1039800:five_prime_UTR | 40.0% | |
| CCAAATCTTGTTAGGGACTA+GGG | - | chr7_1:77105453-77105472 | Msa1039800:five_prime_UTR | 40.0% | |
| ! | TTTCGTTTCGGTGTGTGATT+CGG | - | chr7_1:77104350-77104369 | Msa1039800:three_prime_UTR | 40.0% |
| AAACCACCAAAACACCACTT+TGG | - | chr7_1:77104639-77104658 | Msa1039800:exon | 40.0% | |
| AATGATACCTTGGGTCCATT+TGG | + | chr7_1:77104674-77104693 | None:intergenic | 40.0% | |
| GAATCAGGTACAGAAAGAGA+AGG | - | chr7_1:77104958-77104977 | Msa1039800:intron | 40.0% | |
| ATCAGGTACAGAAAGAGAAG+GGG | - | chr7_1:77104960-77104979 | Msa1039800:intron | 40.0% | |
| GTTGTAGCAAAGGACAAGAA+AGG | - | chr7_1:77104985-77105004 | Msa1039800:intron | 40.0% | |
| TCCAAATCTTGTTAGGGACT+AGG | - | chr7_1:77105452-77105471 | Msa1039800:five_prime_UTR | 40.0% | |
| CCAAATCTTGTTAGGGACTA+GGG | - | chr7_1:77105453-77105472 | Msa1039800:five_prime_UTR | 40.0% | |
| !! | TCTCCAAAGTGGTGTTTTGG+TGG | + | chr7_1:77104645-77104664 | None:intergenic | 45.0% |
| ! | ACCAAAACACCACTTTGGAG+AGG | - | chr7_1:77104644-77104663 | Msa1039800:CDS | 45.0% |
| ! | TCCTCTCCAAAGTGGTGTTT+TGG | + | chr7_1:77104648-77104667 | None:intergenic | 45.0% |
| ! | AAAACACCACTTTGGAGAGG+AGG | - | chr7_1:77104647-77104666 | Msa1039800:CDS | 45.0% |
| AGAAGGGGTTGTTGTAGCAA+AGG | - | chr7_1:77104975-77104994 | Msa1039800:intron | 45.0% | |
| GCAAAGGACAAGAAAGGGAA+AGG | - | chr7_1:77104991-77105010 | Msa1039800:intron | 45.0% | |
| AGGGAAAGGAAGAGAGAGAA+AGG | - | chr7_1:77105005-77105024 | Msa1039800:intron | 45.0% | |
| ! | AGAGAGAAAGGTGCACAGAA+TGG | - | chr7_1:77105017-77105036 | Msa1039800:intron | 45.0% |
| ! | GAGAGAAAGGTGCACAGAAT+GGG | - | chr7_1:77105018-77105037 | Msa1039800:intron | 45.0% |
| ! | AAAGGTGCACAGAATGGGAA+TGG | - | chr7_1:77105023-77105042 | Msa1039800:intron | 45.0% |
| AAGGTGCACAGAATGGGAAT+GGG | - | chr7_1:77105024-77105043 | Msa1039800:intron | 45.0% | |
| ACAAGCTGCTGTGTGTTTGA+TGG | - | chr7_1:77105181-77105200 | Msa1039800:CDS | 45.0% | |
| ! | TGTTTGATGGCACTCTCTTG+TGG | - | chr7_1:77105194-77105213 | Msa1039800:intron | 45.0% |
| CCCTAGTCCCTAACAAGATT+TGG | + | chr7_1:77105456-77105475 | None:intergenic | 45.0% | |
| !! | TCTCCAAAGTGGTGTTTTGG+TGG | + | chr7_1:77104645-77104664 | None:intergenic | 45.0% |
| ! | ACCAAAACACCACTTTGGAG+AGG | - | chr7_1:77104644-77104663 | Msa1039800:CDS | 45.0% |
| ! | TCCTCTCCAAAGTGGTGTTT+TGG | + | chr7_1:77104648-77104667 | None:intergenic | 45.0% |
| ! | AAAACACCACTTTGGAGAGG+AGG | - | chr7_1:77104647-77104666 | Msa1039800:CDS | 45.0% |
| AGAAGGGGTTGTTGTAGCAA+AGG | - | chr7_1:77104975-77104994 | Msa1039800:intron | 45.0% | |
| GCAAAGGACAAGAAAGGGAA+AGG | - | chr7_1:77104991-77105010 | Msa1039800:intron | 45.0% | |
| AGGGAAAGGAAGAGAGAGAA+AGG | - | chr7_1:77105005-77105024 | Msa1039800:intron | 45.0% | |
| ! | AGAGAGAAAGGTGCACAGAA+TGG | - | chr7_1:77105017-77105036 | Msa1039800:intron | 45.0% |
| ! | GAGAGAAAGGTGCACAGAAT+GGG | - | chr7_1:77105018-77105037 | Msa1039800:intron | 45.0% |
| ! | AAAGGTGCACAGAATGGGAA+TGG | - | chr7_1:77105023-77105042 | Msa1039800:intron | 45.0% |
| AAGGTGCACAGAATGGGAAT+GGG | - | chr7_1:77105024-77105043 | Msa1039800:intron | 45.0% | |
| ACAAGCTGCTGTGTGTTTGA+TGG | - | chr7_1:77105181-77105200 | Msa1039800:CDS | 45.0% | |
| ! | TGTTTGATGGCACTCTCTTG+TGG | - | chr7_1:77105194-77105213 | Msa1039800:intron | 45.0% |
| CCCTAGTCCCTAACAAGATT+TGG | + | chr7_1:77105456-77105475 | None:intergenic | 45.0% | |
| TTTGGTCCTCCTCTCCAAAG+TGG | + | chr7_1:77104656-77104675 | None:intergenic | 50.0% | |
| ! | CTTTGGAGAGGAGGACCAAA+TGG | - | chr7_1:77104656-77104675 | Msa1039800:CDS | 50.0% |
| TAGACGTTGTGCAACGCTTG+TGG | - | chr7_1:77104936-77104955 | Msa1039800:intron | 50.0% | |
| TGTGCAACGCTTGTGGAATC+AGG | - | chr7_1:77104943-77104962 | Msa1039800:intron | 50.0% | |
| TGCACAGAATGGGAATGGGA+GGG | - | chr7_1:77105028-77105047 | Msa1039800:intron | 50.0% | |
| TTGTTAGGGACTAGGGAGTG+AGG | - | chr7_1:77105460-77105479 | Msa1039800:five_prime_UTR | 50.0% | |
| TTTGGTCCTCCTCTCCAAAG+TGG | + | chr7_1:77104656-77104675 | None:intergenic | 50.0% | |
| ! | CTTTGGAGAGGAGGACCAAA+TGG | - | chr7_1:77104656-77104675 | Msa1039800:CDS | 50.0% |
| TAGACGTTGTGCAACGCTTG+TGG | - | chr7_1:77104936-77104955 | Msa1039800:intron | 50.0% | |
| TGTGCAACGCTTGTGGAATC+AGG | - | chr7_1:77104943-77104962 | Msa1039800:intron | 50.0% | |
| TGCACAGAATGGGAATGGGA+GGG | - | chr7_1:77105028-77105047 | Msa1039800:intron | 50.0% | |
| TTGTTAGGGACTAGGGAGTG+AGG | - | chr7_1:77105460-77105479 | Msa1039800:five_prime_UTR | 50.0% | |
| AGGAGGACCAAATGGACCCA+AGG | - | chr7_1:77104664-77104683 | Msa1039800:CDS | 55.0% | |
| GTGCACAGAATGGGAATGGG+AGG | - | chr7_1:77105027-77105046 | Msa1039800:intron | 55.0% | |
| GCACAGAATGGGAATGGGAG+GGG | - | chr7_1:77105029-77105048 | Msa1039800:intron | 55.0% | |
| GGTGGTACTAGCAGTAGCAG+TGG | - | chr7_1:77105050-77105069 | Msa1039800:intron | 55.0% | |
| TTAGGGACTAGGGAGTGAGG+TGG | - | chr7_1:77105463-77105482 | Msa1039800:five_prime_UTR | 55.0% | |
| AGGAGGACCAAATGGACCCA+AGG | - | chr7_1:77104664-77104683 | Msa1039800:CDS | 55.0% | |
| GTGCACAGAATGGGAATGGG+AGG | - | chr7_1:77105027-77105046 | Msa1039800:intron | 55.0% | |
| GCACAGAATGGGAATGGGAG+GGG | - | chr7_1:77105029-77105048 | Msa1039800:intron | 55.0% | |
| GGTGGTACTAGCAGTAGCAG+TGG | - | chr7_1:77105050-77105069 | Msa1039800:intron | 55.0% | |
| TTAGGGACTAGGGAGTGAGG+TGG | - | chr7_1:77105463-77105482 | Msa1039800:five_prime_UTR | 55.0% | |
| CAGAATGGGAATGGGAGGGG+TGG | - | chr7_1:77105032-77105051 | Msa1039800:intron | 60.0% | |
| CAGAATGGGAATGGGAGGGG+TGG | - | chr7_1:77105032-77105051 | Msa1039800:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 77104298 | 77105498 | 77104298 | ID=Msa1039800;Name=Msa1039800 |
| chr7_1 | mRNA | 77104298 | 77105498 | 77104298 | ID=Msa1039800-mRNA-1;Parent=Msa1039800;Name=Msa1039800-mRNA-1;_AED=0.00;_eAED=0.00;_QI=144|1|1|1|1|1|3|344|114 |
| chr7_1 | exon | 77104298 | 77104857 | 77104298 | ID=Msa1039800-mRNA-1:exon:20183;Parent=Msa1039800-mRNA-1 |
| chr7_1 | exon | 77105111 | 77105212 | 77105111 | ID=Msa1039800-mRNA-1:exon:20182;Parent=Msa1039800-mRNA-1 |
| chr7_1 | exon | 77105328 | 77105498 | 77105328 | ID=Msa1039800-mRNA-1:exon:20181;Parent=Msa1039800-mRNA-1 |
| chr7_1 | five_prime_UTR | 77105355 | 77105498 | 77105355 | ID=Msa1039800-mRNA-1:five_prime_utr;Parent=Msa1039800-mRNA-1 |
| chr7_1 | CDS | 77105328 | 77105354 | 77105328 | ID=Msa1039800-mRNA-1:cds;Parent=Msa1039800-mRNA-1 |
| chr7_1 | CDS | 77105111 | 77105212 | 77105111 | ID=Msa1039800-mRNA-1:cds;Parent=Msa1039800-mRNA-1 |
| chr7_1 | CDS | 77104642 | 77104857 | 77104642 | ID=Msa1039800-mRNA-1:cds;Parent=Msa1039800-mRNA-1 |
| chr7_1 | three_prime_UTR | 77104298 | 77104641 | 77104298 | ID=Msa1039800-mRNA-1:three_prime_utr;Parent=Msa1039800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
